Polychaeta: Syllidae) from South Africa, One of Them Viviparous, with Remarks on Larval Development and Vivipary
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National Monitoring Program for Biodiversity and Non-Indigenous Species in Egypt
UNITED NATIONS ENVIRONMENT PROGRAM MEDITERRANEAN ACTION PLAN REGIONAL ACTIVITY CENTRE FOR SPECIALLY PROTECTED AREAS National monitoring program for biodiversity and non-indigenous species in Egypt PROF. MOUSTAFA M. FOUDA April 2017 1 Study required and financed by: Regional Activity Centre for Specially Protected Areas Boulevard du Leader Yasser Arafat BP 337 1080 Tunis Cedex – Tunisie Responsible of the study: Mehdi Aissi, EcApMEDII Programme officer In charge of the study: Prof. Moustafa M. Fouda Mr. Mohamed Said Abdelwarith Mr. Mahmoud Fawzy Kamel Ministry of Environment, Egyptian Environmental Affairs Agency (EEAA) With the participation of: Name, qualification and original institution of all the participants in the study (field mission or participation of national institutions) 2 TABLE OF CONTENTS page Acknowledgements 4 Preamble 5 Chapter 1: Introduction 9 Chapter 2: Institutional and regulatory aspects 40 Chapter 3: Scientific Aspects 49 Chapter 4: Development of monitoring program 59 Chapter 5: Existing Monitoring Program in Egypt 91 1. Monitoring program for habitat mapping 103 2. Marine MAMMALS monitoring program 109 3. Marine Turtles Monitoring Program 115 4. Monitoring Program for Seabirds 118 5. Non-Indigenous Species Monitoring Program 123 Chapter 6: Implementation / Operational Plan 131 Selected References 133 Annexes 143 3 AKNOWLEGEMENTS We would like to thank RAC/ SPA and EU for providing financial and technical assistances to prepare this monitoring programme. The preparation of this programme was the result of several contacts and interviews with many stakeholders from Government, research institutions, NGOs and fishermen. The author would like to express thanks to all for their support. In addition; we would like to acknowledge all participants who attended the workshop and represented the following institutions: 1. -
Annelida, Phyllodocida)
A peer-reviewed open-access journal ZooKeys 488: 1–29Guide (2015) and keys for the identification of Syllidae( Annelida, Phyllodocida)... 1 doi: 10.3897/zookeys.488.9061 RESEARCH ARTICLE http://zookeys.pensoft.net Launched to accelerate biodiversity research Guide and keys for the identification of Syllidae (Annelida, Phyllodocida) from the British Isles (reported and expected species) Guillermo San Martín1, Tim M. Worsfold2 1 Departamento de Biología (Zoología), Laboratorio de Biología Marina e Invertebrados, Facultad de Ciencias, Universidad Autónoma de Madrid, Canto Blanco, 28049 Madrid, Spain 2 APEM Limited, Diamond Centre, Unit 7, Works Road, Letchworth Garden City, Hertfordshire SG6 1LW, UK Corresponding author: Guillermo San Martín ([email protected]) Academic editor: Chris Glasby | Received 3 December 2014 | Accepted 1 February 2015 | Published 19 March 2015 http://zoobank.org/E9FCFEEA-7C9C-44BF-AB4A-CEBECCBC2C17 Citation: San Martín G, Worsfold TM (2015) Guide and keys for the identification of Syllidae (Annelida, Phyllodocida) from the British Isles (reported and expected species). ZooKeys 488: 1–29. doi: 10.3897/zookeys.488.9061 Abstract In November 2012, a workshop was carried out on the taxonomy and systematics of the family Syllidae (Annelida: Phyllodocida) at the Dove Marine Laboratory, Cullercoats, Tynemouth, UK for the National Marine Biological Analytical Quality Control (NMBAQC) Scheme. Illustrated keys for subfamilies, genera and species found in British and Irish waters were provided for participants from the major national agencies and consultancies involved in benthic sample processing. After the workshop, we prepared updates to these keys, to include some additional species provided by participants, and some species reported from nearby areas. -
Diversidad En La Fauna De Sílinos (Polychaeta: Syllidae: Syllinae) De Las Costas Del Noroeste De México
UNIVERSIDAD AUTÓNOMA DE NUEVO LEÓN FACULTAD DE CIENCIAS BIOLÓGICAS Diversidad en la fauna de Sílinos (Polychaeta: Syllidae: Syllinae) de las costas del Noroeste de México. Gerardo Góngora Garza Como requisito parcial para obtener el Grado de Doctor en Ciencias Biológicas Con Acentuación en Manejo de Vida Silvestre y Desarrollo Sustentable Diciembre de 2011 Diversidad en la fauna de Sílinos (Polychaeta: Syllidae: Syllinae) de las costas del Noroeste de México. Diversidad en la fauna de Sílinos (Polychaeta: Syllidae: Syllinae) de las costas del Noroeste de México. Comité de Tesis _____________________________________ Dr. Jesús Ángel de León González Director de Tesis _____________________________________ Dr. Guillermo San Martin Peral Director Externo _____________________________________ Dr. Gabino Adrián Rodríguez Almaraz Secretario ____________________________________ Dr. Carlos Solís Rojas Vocal ____________________________________ Dr. Alejandro González Hernández Vocal i Diversidad en la fauna de Sílinos (Polychaeta: Syllidae: Syllinae) de las costas del Noroeste de México. Si el dinero se repartiera, como se distribuyen los poliquetos en los distintos hábitats marinos, todo el mundo sería inmensamente rico. ii Diversidad en la fauna de Sílinos (Polychaeta: Syllidae: Syllinae) de las costas del Noroeste de México. 1. RESUMEN ........................................................................................................................ 1 2. ABSTRACT ..................................................................................................................... -
An Analysis of Complete Mitochondrial Genome and Received: 17 March 2015 Accepted: 12 June 2015 Ribosomal Data of Ramisyllis Published: 17 July 2015 Multicaudata
www.nature.com/scientificreports OPEN The making of a branching annelid: an analysis of complete mitochondrial genome and Received: 17 March 2015 Accepted: 12 June 2015 ribosomal data of Ramisyllis Published: 17 July 2015 multicaudata M. Teresa Aguado1, Christopher J. Glasby2, Paul C. Schroeder3, Anne Weigert4,5 & Christoph Bleidorn4 Ramisyllis multicaudata is a member of Syllidae (Annelida, Errantia, Phyllodocida) with a remarkable branching body plan. Using a next-generation sequencing approach, the complete mitochondrial genomes of R. multicaudata and Trypanobia sp. are sequenced and analysed, representing the first ones from Syllidae. The gene order in these two syllids does not follow the order proposed as the putative ground pattern in Errantia. The phylogenetic relationships of R. multicaudata are discerned using a phylogenetic approach with the nuclear 18S and the mitochondrial 16S and cox1 genes. Ramisyllis multicaudata is the sister group of a clade containing Trypanobia species. Both genera, Ramisyllis and Trypanobia, together with Parahaplosyllis, Trypanosyllis, Eurysyllis, and Xenosyllis are located in a long branched clade. The long branches are explained by an accelerated mutational rate in the 18S rRNA gene. Using a phylogenetic backbone, we propose a scenario in which the postembryonic addition of segments that occurs in most syllids, their huge diversity of reproductive modes, and their ability to regenerate lost parts, in combination, have provided an evolutionary basis to develop a new branching body pattern as realised in Ramisyllis. Annelids are a taxon of marine lophotrochozoans with mainly segmented members showing a huge diversity of body plans1. One of the most speciose taxa is the Syllidae, which are further well-known for their diverse reproductive modes. -
National Monitoring Program for Biodiversity and Non-Indigenous Species in Egypt
National monitoring program for biodiversity and non-indigenous species in Egypt January 2016 1 TABLE OF CONTENTS page Acknowledgements 3 Preamble 4 Chapter 1: Introduction 8 Overview of Egypt Biodiversity 37 Chapter 2: Institutional and regulatory aspects 39 National Legislations 39 Regional and International conventions and agreements 46 Chapter 3: Scientific Aspects 48 Summary of Egyptian Marine Biodiversity Knowledge 48 The Current Situation in Egypt 56 Present state of Biodiversity knowledge 57 Chapter 4: Development of monitoring program 58 Introduction 58 Conclusions 103 Suggested Monitoring Program Suggested monitoring program for habitat mapping 104 Suggested marine MAMMALS monitoring program 109 Suggested Marine Turtles Monitoring Program 115 Suggested Monitoring Program for Seabirds 117 Suggested Non-Indigenous Species Monitoring Program 121 Chapter 5: Implementation / Operational Plan 128 Selected References 130 Annexes 141 2 AKNOWLEGEMENTS 3 Preamble The Ecosystem Approach (EcAp) is a strategy for the integrated management of land, water and living resources that promotes conservation and sustainable use in an equitable way, as stated by the Convention of Biological Diversity. This process aims to achieve the Good Environmental Status (GES) through the elaborated 11 Ecological Objectives and their respective common indicators. Since 2008, Contracting Parties to the Barcelona Convention have adopted the EcAp and agreed on a roadmap for its implementation. First phases of the EcAp process led to the accomplishment of 5 steps of the scheduled 7-steps process such as: 1) Definition of an Ecological Vision for the Mediterranean; 2) Setting common Mediterranean strategic goals; 3) Identification of an important ecosystem properties and assessment of ecological status and pressures; 4) Development of a set of ecological objectives corresponding to the Vision and strategic goals; and 5) Derivation of operational objectives with indicators and target levels. -
Molecular Phylogeny of Odontosyllis (Annelida, Syllidae): a Recent and Rapid Radiation of Marine Bioluminescent Worms
bioRxiv preprint doi: https://doi.org/10.1101/241570; this version posted January 8, 2018. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Molecular phylogeny of Odontosyllis (Annelida, Syllidae): A recent and rapid radiation of marine bioluminescent worms. AIDA VERDES1,2,3,4, PATRICIA ALVAREZ-CAMPOS5, ARNE NYGREN6, GUILLERMO SAN MARTIN3, GREG ROUSE7, DIMITRI D. DEHEYN7, DAVID F. GRUBER2,4,8, MANDE HOLFORD1,2,4 1 Department of Chemistry, Hunter College Belfer Research Center, The City University of New York. 2 The Graduate Center, Program in Biology, Chemistry and Biochemistry, The City University of New York. 3 Departamento de Biología (Zoología), Facultad de Ciencias, Universidad Autónoma de Madrid. 4 Sackler Institute for Comparative Genomics, American Museum of Natural History. 5 Stem Cells, Development and Evolution, Institute Jacques Monod. 6 Department of Systematics and Biodiversity, University of Gothenburg. 7 Marine Biology Research Division, Scripps Institution of Oceanography, University of California San Diego. 8 Department of Natural Sciences, Weissman School of Arts and Sciences, Baruch College, The City University of New York Abstract Marine worms of the genus Odontosyllis (Syllidae, Annelida) are well known for their spectacular bioluminescent courtship rituals. During the reproductive period, the benthic marine worms leave the ocean floor and swim to the surface to spawn, using bioluminescent light for mate attraction. The behavioral aspects of the courtship ritual have been extensively investigated, but little is known about the origin and evolution of light production in Odontosyllis, which might in fact be a key factor shaping the natural history of the group, as bioluminescent courtship might promote speciation. -
Eusyllinae and Syllinae (Annelida: Polychaeta) from Northern Cyprus (Eastern Mediterranean Sea) with a Checklist of Species Reported from the Levant Sea
BULLETIN OF MARINE SCIENCE, 72(3): 769–793, 2003 EUSYLLINAE AND SYLLINAE (ANNELIDA: POLYCHAETA) FROM NORTHERN CYPRUS (EASTERN MEDITERRANEAN SEA) WITH A CHECKLIST OF SPECIES REPORTED FROM THE LEVANT SEA Melih Ertan Çinar and Zeki Ergen ABSTRACT Shallow and deep-water benthic samples collected during two cruises to northern Cyprus held in 1997 and 1998 showed relatively high species richness of Eusyllinae and Syllinae, with a total of 49 species. The materials contained one species (Eusyllis kupfferi Langer- hans, 1879) new to the Mediterranean Sea, seven species new to the Eastern Mediterra- nean Sea, 23 species new to the Levantine Sea and 42 species new to Cyprus. The mor- phological, biometrical and distributional characteristics of the species as well as a checklist of the Eusyllinae and Syllinae species reported from the Levant coast are provided. A review of papers treating zoobenthos of the Levantine Sea revealed a total of 33 species of Eusyllinae and Syllinae, eight of which were reported from Cyprus: Eusyllis assimilis, Syllides edentulus (as S. edentula), Ehlersia ferrugina, Haplosyllis spongicola, Syllis armillaris, S. prolifera, S. variegata, and Trypanosyllis zebra (Ben-Eliahu, 1972, 1995; Ben-Eliahu and Fiege, 1995; Russo, 1997). The present study deals with species richness of Eusyllinae and Syllinae inhabiting shallow and deep-water benthic assemblages of the Cypriot coast, and their morphometrical and distributional patterns. METHODS Sampling procedures, depths and nature of the substrata are given in Çinar et al. (this volume). RESULTS Faunistic analysis of a total of 77 benthic samples taken by the R/V K. PIRI REIS during two cruises in May 1997 and July 1998, yielded 1679 specimens belonging to 49 species; the Eusyllinae had 16 species and 347 individuals, and the Syllinae possessed 33 species and 1332 individuals. -
Biodiversity and Biogeography of Polychaete Worms (Annelida): Globally and in Wallacea
Research Proposal BIODIVERSITY AND BIOGEOGRAPHY OF POLYCHAETE WORMS (ANNELIDA): GLOBALLY AND IN WALLACEA Proposed by: Joko Pamungkas Principal supervisor: Dr. Mark J. Costello Co-supervisor: Dr. Christopher J. Glasby INSITUTE OF MARINE SCIENCE FACULTY OF SCIENCE UNIVERSITY OF AUCKLAND 2017 1 Table of Contents 1. Introduction ........................................................................................................... 3 1.1 Background ..................................................................................................... 3 1.2 Objectives ........................................................................................................ 5 2. Literature Review .................................................................................................. 6 2.1 Polychaete taxonomy, biology and ecology ..................................................... 6 2.2 Global species richness: how to estimate? ....................................................... 10 2.3 Global distribution of marine species ............................................................... 11 2.4 Indonesian polychaetes ..................................................................................... 13 2.5 Indo-West Pacific and Wallacea ..................................................................... 15 3. Methodology .......................................................................................................... 18 3.1 Estimating the global species richness of polychaetes .................................... -
Chec List Marine and Coastal Biodiversity of Oaxaca, Mexico
Check List 9(2): 329–390, 2013 © 2013 Check List and Authors Chec List ISSN 1809-127X (available at www.checklist.org.br) Journal of species lists and distribution ǡ PECIES * S ǤǦ ǡÀ ÀǦǡ Ǧ ǡ OF ×±×Ǧ±ǡ ÀǦǡ Ǧ ǡ ISTS María Torres-Huerta, Alberto Montoya-Márquez and Norma A. Barrientos-Luján L ǡ ǡǡǡǤͶǡͲͻͲʹǡǡ ǡ ȗ ǤǦǣ[email protected] ćĘęėĆĈęǣ ϐ Ǣ ǡǡ ϐǤǡ ǤǣͳȌ ǢʹȌ Ǥͳͻͺ ǯϐ ʹǡͳͷ ǡͳͷ ȋǡȌǤǡϐ ǡ Ǥǡϐ Ǣ ǡʹͶʹȋͳͳǤʹΨȌ ǡ groups (annelids, crustaceans and mollusks) represent about 44.0% (949 species) of all species recorded, while the ʹ ȋ͵ͷǤ͵ΨȌǤǡ not yet been recorded on the Oaxaca coast, including some platyhelminthes, rotifers, nematodes, oligochaetes, sipunculids, echiurans, tardigrades, pycnogonids, some crustaceans, brachiopods, chaetognaths, ascidians and cephalochordates. The ϐϐǢ Ǥ ēęėĔĉĚĈęĎĔē Madrigal and Andreu-Sánchez 2010; Jarquín-González The state of Oaxaca in southern Mexico (Figure 1) is and García-Madrigal 2010), mollusks (Rodríguez-Palacios known to harbor the highest continental faunistic and et al. 1988; Holguín-Quiñones and González-Pedraza ϐ ȋ Ǧ± et al. 1989; de León-Herrera 2000; Ramírez-González and ʹͲͲͶȌǤ Ǧ Barrientos-Luján 2007; Zamorano et al. 2008, 2010; Ríos- ǡ Jara et al. 2009; Reyes-Gómez et al. 2010), echinoderms (Benítez-Villalobos 2001; Zamorano et al. 2006; Benítez- ϐ Villalobos et alǤʹͲͲͺȌǡϐȋͳͻͻǢǦ Ǥ ǡ 1982; Tapia-García et alǤ ͳͻͻͷǢ ͳͻͻͺǢ Ǧ ϐ (cf. García-Mendoza et al. 2004). ǡ ǡ studies among taxonomic groups are not homogeneous: longer than others. Some of the main taxonomic groups ȋ ÀʹͲͲʹǢǦʹͲͲ͵ǢǦet al. -
Polychaeta) with Reference to What Was Published in the Red Sea and Suez Canal, Egypt
Egyptian Journal of Aquatic Biology & Fisheries Zoology Department, Faculty of Science, Ain Shams University, Cairo, Egypt. ISSN 1110 – 6131 Vol. 23(5): 235 - 251 (2019) www.ejabf.journals.ekb.eg Catalog of Syllidae (Polychaeta) with reference to what was published in the Red Sea and Suez Canal, Egypt Faiza Ali Abd- Elnaby National Institute of Oceanography and Fisheries (NIOF) Alexandria, Egypt. [email protected] ARTICLE INFO ABSTRACT Article History: Thirty-six Syllid species were identified in the Petro Gulf Misr Received: Nov. 19, 2019 Project (2017, 2018, 2019). 58 sediment samples were collected from Accepted: Dec. 20, 2019 the Suez Gulf (Gable El Zeit Area). The data revealed that 36 syllidae Online: Dec. 23, 2019 species were recorded; 19 of them are considered new recorded _______________ species reported for the first time during the present study (Species Keywords: with*). Of these species, 13 of them were previously reported in the Polychaetes Suez Canal. This research is considered a new addition to the family Syllidae monitoring work of polychaetes in the Gulf of Suez, supplied by data Suez Gulf and distribution of Syllidae species in the Suez Canal, Red Sea and Suez Canal Suez Gulf region. Adding notes of description for some. Red Sea INTRODUCTION Syllidae are small-sized polychaetes occurring on all substrates, the Syllidae are the most widespread family, including about 900 distinct species belonging to more than 80 genera with complicated morphological and ecological characteristics (Faulwetter et al. 2011). Many polychaetes studies have been conducted in the Suez Canal, Suez Gulf and Aqaba Gulf (Fauvel, 1927; Ben-Eliahu, 1972; Amoureux et al.; Wehe and Fiege, 2002; Hove et al., 2006). -
Cellular Proliferation Dynamics During Regeneration in Syllis Malaquini
Ribeiro et al. Frontiers in Zoology (2021) 18:27 https://doi.org/10.1186/s12983-021-00396-y RESEARCH Open Access Cellular proliferation dynamics during regeneration in Syllis malaquini (Syllidae, Annelida) Rannyele Passos Ribeiro1* , Bernhard Egger2 , Guillermo Ponz-Segrelles1 and M. Teresa Aguado3* Abstract Background: In syllids (Annelida, Syllidae), the regenerative blastema was subject of many studies in the mid and late XXth century. This work on syllid regeneration showed that the blastema is developed by a process of dedifferentiation of cells near the wound, followed by their proliferation and redifferentiation (cells differentiate to the original cell type) or, in some specific cases, transdifferentiation (cells differentiate to a cell type different from the original). Up to date, participation of stem cells or pre-existing proliferative cells in the blastema development has never been observed in syllids. This study provides the first comprehensive description of Syllis malaquini’s regenerative capacity, including data on the cellular proliferation dynamics by using an EdU/BrdU labelling approach, in order to trace proliferative cells (S-phase cells) present before and after operation. Results: Syllis malaquini can restore the anterior and posterior body from different cutting levels under experimental conditions, even from midbody fragments. Our results on cellular proliferation showed that S-phase cells present in the body before bisection do not significantly contribute to blastema development. However, in some specimens cut at the level of the proventricle, cells in S-phase located in the digestive tube before bisection participated in regeneration. Also, our results showed that nucleus shape allows to distinguish different types of blastemal cells as forming specific tissues. -
Internal and Secreted Bioluminescence of the Marine Polychaete Odontosyllis Phosphorea (Syllidae)
Invertebrate Biology 128(1): 31–45. r 2009, The Authors Journal compilation r 2009, The American Microscopical Society, Inc. DOI: 10.1111/j.1744-7410.2008.00149.x Internal and secreted bioluminescence of the marine polychaete Odontosyllis phosphorea (Syllidae) Dimitri D. Deheyna and Michael I. Latz Marine Biology Research Division, Scripps Institution of Oceanography, University of California San Diego, La Jolla, California 92093-0202, USA Abstract. The syllid polychaete Odontosyllis phosphorea produces brilliant displays of green bioluminescence during mating swarms. We studied freshly collected individuals of O. phos- phorea in the laboratory to understand the characteristics of its luminescent system. Light emission appeared as an intense glow after stimulation with potassium chloride, and was associated with secreted mucus. The mucus was viscous, blue in color, and exhibited a long- lasting glow that was greatly intensified by addition of peroxidase or ammonium persulfate. The emission spectrum of mucus-associated bioluminescence was unimodal, with a maximum emission in the green spectrum between 494 and 504 nm. The fluorescence emission spectrum was similar, but the fluorescence intensity was low unless it originated from mucus that had already produced light, suggesting that the oxidized product of the light production is the source of fluorescence. Individuals as small as 0.5–1.0 mm produced bioluminescence that was mainly internal and not secreted as mucus. The early occurrence of bioluminescence in the life cycle of members of O. phosphorea suggests that bioluminescence may be used for purposes other than attracting mates. The luminous system was functional at temperatures as low as À201C and was degraded above 401C.