An Analysis of Complete Mitochondrial Genome and Received: 17 March 2015 Accepted: 12 June 2015 Ribosomal Data of Ramisyllis Published: 17 July 2015 Multicaudata
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National Monitoring Program for Biodiversity and Non-Indigenous Species in Egypt
UNITED NATIONS ENVIRONMENT PROGRAM MEDITERRANEAN ACTION PLAN REGIONAL ACTIVITY CENTRE FOR SPECIALLY PROTECTED AREAS National monitoring program for biodiversity and non-indigenous species in Egypt PROF. MOUSTAFA M. FOUDA April 2017 1 Study required and financed by: Regional Activity Centre for Specially Protected Areas Boulevard du Leader Yasser Arafat BP 337 1080 Tunis Cedex – Tunisie Responsible of the study: Mehdi Aissi, EcApMEDII Programme officer In charge of the study: Prof. Moustafa M. Fouda Mr. Mohamed Said Abdelwarith Mr. Mahmoud Fawzy Kamel Ministry of Environment, Egyptian Environmental Affairs Agency (EEAA) With the participation of: Name, qualification and original institution of all the participants in the study (field mission or participation of national institutions) 2 TABLE OF CONTENTS page Acknowledgements 4 Preamble 5 Chapter 1: Introduction 9 Chapter 2: Institutional and regulatory aspects 40 Chapter 3: Scientific Aspects 49 Chapter 4: Development of monitoring program 59 Chapter 5: Existing Monitoring Program in Egypt 91 1. Monitoring program for habitat mapping 103 2. Marine MAMMALS monitoring program 109 3. Marine Turtles Monitoring Program 115 4. Monitoring Program for Seabirds 118 5. Non-Indigenous Species Monitoring Program 123 Chapter 6: Implementation / Operational Plan 131 Selected References 133 Annexes 143 3 AKNOWLEGEMENTS We would like to thank RAC/ SPA and EU for providing financial and technical assistances to prepare this monitoring programme. The preparation of this programme was the result of several contacts and interviews with many stakeholders from Government, research institutions, NGOs and fishermen. The author would like to express thanks to all for their support. In addition; we would like to acknowledge all participants who attended the workshop and represented the following institutions: 1. -
Annelida, Phyllodocida)
A peer-reviewed open-access journal ZooKeys 488: 1–29Guide (2015) and keys for the identification of Syllidae( Annelida, Phyllodocida)... 1 doi: 10.3897/zookeys.488.9061 RESEARCH ARTICLE http://zookeys.pensoft.net Launched to accelerate biodiversity research Guide and keys for the identification of Syllidae (Annelida, Phyllodocida) from the British Isles (reported and expected species) Guillermo San Martín1, Tim M. Worsfold2 1 Departamento de Biología (Zoología), Laboratorio de Biología Marina e Invertebrados, Facultad de Ciencias, Universidad Autónoma de Madrid, Canto Blanco, 28049 Madrid, Spain 2 APEM Limited, Diamond Centre, Unit 7, Works Road, Letchworth Garden City, Hertfordshire SG6 1LW, UK Corresponding author: Guillermo San Martín ([email protected]) Academic editor: Chris Glasby | Received 3 December 2014 | Accepted 1 February 2015 | Published 19 March 2015 http://zoobank.org/E9FCFEEA-7C9C-44BF-AB4A-CEBECCBC2C17 Citation: San Martín G, Worsfold TM (2015) Guide and keys for the identification of Syllidae (Annelida, Phyllodocida) from the British Isles (reported and expected species). ZooKeys 488: 1–29. doi: 10.3897/zookeys.488.9061 Abstract In November 2012, a workshop was carried out on the taxonomy and systematics of the family Syllidae (Annelida: Phyllodocida) at the Dove Marine Laboratory, Cullercoats, Tynemouth, UK for the National Marine Biological Analytical Quality Control (NMBAQC) Scheme. Illustrated keys for subfamilies, genera and species found in British and Irish waters were provided for participants from the major national agencies and consultancies involved in benthic sample processing. After the workshop, we prepared updates to these keys, to include some additional species provided by participants, and some species reported from nearby areas. -
Diversidad En La Fauna De Sílinos (Polychaeta: Syllidae: Syllinae) De Las Costas Del Noroeste De México
UNIVERSIDAD AUTÓNOMA DE NUEVO LEÓN FACULTAD DE CIENCIAS BIOLÓGICAS Diversidad en la fauna de Sílinos (Polychaeta: Syllidae: Syllinae) de las costas del Noroeste de México. Gerardo Góngora Garza Como requisito parcial para obtener el Grado de Doctor en Ciencias Biológicas Con Acentuación en Manejo de Vida Silvestre y Desarrollo Sustentable Diciembre de 2011 Diversidad en la fauna de Sílinos (Polychaeta: Syllidae: Syllinae) de las costas del Noroeste de México. Diversidad en la fauna de Sílinos (Polychaeta: Syllidae: Syllinae) de las costas del Noroeste de México. Comité de Tesis _____________________________________ Dr. Jesús Ángel de León González Director de Tesis _____________________________________ Dr. Guillermo San Martin Peral Director Externo _____________________________________ Dr. Gabino Adrián Rodríguez Almaraz Secretario ____________________________________ Dr. Carlos Solís Rojas Vocal ____________________________________ Dr. Alejandro González Hernández Vocal i Diversidad en la fauna de Sílinos (Polychaeta: Syllidae: Syllinae) de las costas del Noroeste de México. Si el dinero se repartiera, como se distribuyen los poliquetos en los distintos hábitats marinos, todo el mundo sería inmensamente rico. ii Diversidad en la fauna de Sílinos (Polychaeta: Syllidae: Syllinae) de las costas del Noroeste de México. 1. RESUMEN ........................................................................................................................ 1 2. ABSTRACT ..................................................................................................................... -
Taxonomy and Diversity of the Sponge Fauna from Walters Shoal, a Shallow Seamount in the Western Indian Ocean Region
Taxonomy and diversity of the sponge fauna from Walters Shoal, a shallow seamount in the Western Indian Ocean region By Robyn Pauline Payne A thesis submitted in partial fulfilment of the requirements for the degree of Magister Scientiae in the Department of Biodiversity and Conservation Biology, University of the Western Cape. Supervisors: Dr Toufiek Samaai Prof. Mark J. Gibbons Dr Wayne K. Florence The financial assistance of the National Research Foundation (NRF) towards this research is hereby acknowledged. Opinions expressed and conclusions arrived at, are those of the author and are not necessarily to be attributed to the NRF. December 2015 Taxonomy and diversity of the sponge fauna from Walters Shoal, a shallow seamount in the Western Indian Ocean region Robyn Pauline Payne Keywords Indian Ocean Seamount Walters Shoal Sponges Taxonomy Systematics Diversity Biogeography ii Abstract Taxonomy and diversity of the sponge fauna from Walters Shoal, a shallow seamount in the Western Indian Ocean region R. P. Payne MSc Thesis, Department of Biodiversity and Conservation Biology, University of the Western Cape. Seamounts are poorly understood ubiquitous undersea features, with less than 4% sampled for scientific purposes globally. Consequently, the fauna associated with seamounts in the Indian Ocean remains largely unknown, with less than 300 species recorded. One such feature within this region is Walters Shoal, a shallow seamount located on the South Madagascar Ridge, which is situated approximately 400 nautical miles south of Madagascar and 600 nautical miles east of South Africa. Even though it penetrates the euphotic zone (summit is 15 m below the sea surface) and is protected by the Southern Indian Ocean Deep- Sea Fishers Association, there is a paucity of biodiversity and oceanographic data. -
Effects of Agelas Oroides and Petrosia Ficiformis Crude Extracts on Human Neuroblastoma Cell Survival
161-169 6/12/06 19:46 Page 161 INTERNATIONAL JOURNAL OF ONCOLOGY 30: 161-169, 2007 161 Effects of Agelas oroides and Petrosia ficiformis crude extracts on human neuroblastoma cell survival CRISTINA FERRETTI1*, BARBARA MARENGO2*, CHIARA DE CIUCIS3, MARIAPAOLA NITTI3, MARIA ADELAIDE PRONZATO3, UMBERTO MARIA MARINARI3, ROBERTO PRONZATO1, RENATA MANCONI4 and CINZIA DOMENICOTTI3 1Department for the Study of Territory and its Resources, University of Genoa, Corso Europa 26, I-16132 Genoa; 2G. Gaslini Institute, Gaslini Hospital, Largo G. Gaslini 5, I-16148 Genoa; 3Department of Experimental Medicine, University of Genoa, Via Leon Battista Alberti 2, I-16132 Genoa; 4Department of Zoology and Evolutionistic Genetics, University of Sassari, Via Muroni 25, I-07100 Sassari, Italy Received July 28, 2006; Accepted September 20, 2006 Abstract. Among marine sessile organisms, sponges (Porifera) Introduction are the major producers of bioactive secondary metabolites that defend them against predators and competitors and are used to Sponges (Porifera) are a type of marine fauna that produce interfere with the pathogenesis of many human diseases. Some bioactive molecules to defend themselves from predators or of these biological active metabolites are able to influence cell spatial competitors (1,2). It has been demonstrated that some survival and death, modifying the activity of several enzymes of these metabolites have a biomedical potential (3) and in involved in these cellular processes. These natural compounds particular, Ara-A and Ara-C are clinically used as antineoplastic show a potential anticancer activity but the mechanism of drugs (4,5) in the routine treatment of patients with leukaemia this action is largely unknown. -
National Monitoring Program for Biodiversity and Non-Indigenous Species in Egypt
National monitoring program for biodiversity and non-indigenous species in Egypt January 2016 1 TABLE OF CONTENTS page Acknowledgements 3 Preamble 4 Chapter 1: Introduction 8 Overview of Egypt Biodiversity 37 Chapter 2: Institutional and regulatory aspects 39 National Legislations 39 Regional and International conventions and agreements 46 Chapter 3: Scientific Aspects 48 Summary of Egyptian Marine Biodiversity Knowledge 48 The Current Situation in Egypt 56 Present state of Biodiversity knowledge 57 Chapter 4: Development of monitoring program 58 Introduction 58 Conclusions 103 Suggested Monitoring Program Suggested monitoring program for habitat mapping 104 Suggested marine MAMMALS monitoring program 109 Suggested Marine Turtles Monitoring Program 115 Suggested Monitoring Program for Seabirds 117 Suggested Non-Indigenous Species Monitoring Program 121 Chapter 5: Implementation / Operational Plan 128 Selected References 130 Annexes 141 2 AKNOWLEGEMENTS 3 Preamble The Ecosystem Approach (EcAp) is a strategy for the integrated management of land, water and living resources that promotes conservation and sustainable use in an equitable way, as stated by the Convention of Biological Diversity. This process aims to achieve the Good Environmental Status (GES) through the elaborated 11 Ecological Objectives and their respective common indicators. Since 2008, Contracting Parties to the Barcelona Convention have adopted the EcAp and agreed on a roadmap for its implementation. First phases of the EcAp process led to the accomplishment of 5 steps of the scheduled 7-steps process such as: 1) Definition of an Ecological Vision for the Mediterranean; 2) Setting common Mediterranean strategic goals; 3) Identification of an important ecosystem properties and assessment of ecological status and pressures; 4) Development of a set of ecological objectives corresponding to the Vision and strategic goals; and 5) Derivation of operational objectives with indicators and target levels. -
Molecular Phylogeny of Odontosyllis (Annelida, Syllidae): a Recent and Rapid Radiation of Marine Bioluminescent Worms
bioRxiv preprint doi: https://doi.org/10.1101/241570; this version posted January 8, 2018. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Molecular phylogeny of Odontosyllis (Annelida, Syllidae): A recent and rapid radiation of marine bioluminescent worms. AIDA VERDES1,2,3,4, PATRICIA ALVAREZ-CAMPOS5, ARNE NYGREN6, GUILLERMO SAN MARTIN3, GREG ROUSE7, DIMITRI D. DEHEYN7, DAVID F. GRUBER2,4,8, MANDE HOLFORD1,2,4 1 Department of Chemistry, Hunter College Belfer Research Center, The City University of New York. 2 The Graduate Center, Program in Biology, Chemistry and Biochemistry, The City University of New York. 3 Departamento de Biología (Zoología), Facultad de Ciencias, Universidad Autónoma de Madrid. 4 Sackler Institute for Comparative Genomics, American Museum of Natural History. 5 Stem Cells, Development and Evolution, Institute Jacques Monod. 6 Department of Systematics and Biodiversity, University of Gothenburg. 7 Marine Biology Research Division, Scripps Institution of Oceanography, University of California San Diego. 8 Department of Natural Sciences, Weissman School of Arts and Sciences, Baruch College, The City University of New York Abstract Marine worms of the genus Odontosyllis (Syllidae, Annelida) are well known for their spectacular bioluminescent courtship rituals. During the reproductive period, the benthic marine worms leave the ocean floor and swim to the surface to spawn, using bioluminescent light for mate attraction. The behavioral aspects of the courtship ritual have been extensively investigated, but little is known about the origin and evolution of light production in Odontosyllis, which might in fact be a key factor shaping the natural history of the group, as bioluminescent courtship might promote speciation. -
Eusyllinae and Syllinae (Annelida: Polychaeta) from Northern Cyprus (Eastern Mediterranean Sea) with a Checklist of Species Reported from the Levant Sea
BULLETIN OF MARINE SCIENCE, 72(3): 769–793, 2003 EUSYLLINAE AND SYLLINAE (ANNELIDA: POLYCHAETA) FROM NORTHERN CYPRUS (EASTERN MEDITERRANEAN SEA) WITH A CHECKLIST OF SPECIES REPORTED FROM THE LEVANT SEA Melih Ertan Çinar and Zeki Ergen ABSTRACT Shallow and deep-water benthic samples collected during two cruises to northern Cyprus held in 1997 and 1998 showed relatively high species richness of Eusyllinae and Syllinae, with a total of 49 species. The materials contained one species (Eusyllis kupfferi Langer- hans, 1879) new to the Mediterranean Sea, seven species new to the Eastern Mediterra- nean Sea, 23 species new to the Levantine Sea and 42 species new to Cyprus. The mor- phological, biometrical and distributional characteristics of the species as well as a checklist of the Eusyllinae and Syllinae species reported from the Levant coast are provided. A review of papers treating zoobenthos of the Levantine Sea revealed a total of 33 species of Eusyllinae and Syllinae, eight of which were reported from Cyprus: Eusyllis assimilis, Syllides edentulus (as S. edentula), Ehlersia ferrugina, Haplosyllis spongicola, Syllis armillaris, S. prolifera, S. variegata, and Trypanosyllis zebra (Ben-Eliahu, 1972, 1995; Ben-Eliahu and Fiege, 1995; Russo, 1997). The present study deals with species richness of Eusyllinae and Syllinae inhabiting shallow and deep-water benthic assemblages of the Cypriot coast, and their morphometrical and distributional patterns. METHODS Sampling procedures, depths and nature of the substrata are given in Çinar et al. (this volume). RESULTS Faunistic analysis of a total of 77 benthic samples taken by the R/V K. PIRI REIS during two cruises in May 1997 and July 1998, yielded 1679 specimens belonging to 49 species; the Eusyllinae had 16 species and 347 individuals, and the Syllinae possessed 33 species and 1332 individuals. -
Polychaeta Lana Crumrine
Polychaeta Lana Crumrine Well over 200 species of the class Polychaeta are found in waters off the shores of the Pacific Northwest. Larval descriptions are not available for the majority of these species, though descriptions are available of the larvae for at least some species from most families. This chapter provides a dichotomous key to the polychaete larvae to the family level for those families with known or suspected pelagic larva. Descriptions have be $in gleaned from the literature from sites worldwide, and the keys are based on the assumption that developmental patterns are similar in different geographical locations. This is a large assumption; there are cases in which development varies with geography (e.g., Levin, 1984). Identifying polychaetes at the trochophore stage can be difficult, and culturing larvae to advanced stages is advised by several experts in the field (Bhaud and Cazaux, 1987; Plate and Husemann, 1994). Reproduction, Development, and Morphology Within the polychaetes, the patterns of reproduction and larval development are quite variable. Sexes are separate in most species, though hermaphroditism is not uncommon. Some groups undergo a process called epitoky at sexual maturation; benthic adults develop swimming structures, internal organs degenerate, and mating occurs between adults swimming in the water column. Descriptions of reproductive pattern, gamete formation, and spawning can be found in Strathmann (1987). Larval polychaetes generally develop through three stages: the trochophore, metatrochophore, and nectochaete stages. Trochophores are ciliated larvae (see Fig. 1).A band of cilia, the prototroch, is used for locomotion and sometimes feeding. Trochophore larvae are generally broad anteriorly and taper posteriorly. -
Polychaeta) with Reference to What Was Published in the Red Sea and Suez Canal, Egypt
Egyptian Journal of Aquatic Biology & Fisheries Zoology Department, Faculty of Science, Ain Shams University, Cairo, Egypt. ISSN 1110 – 6131 Vol. 23(5): 235 - 251 (2019) www.ejabf.journals.ekb.eg Catalog of Syllidae (Polychaeta) with reference to what was published in the Red Sea and Suez Canal, Egypt Faiza Ali Abd- Elnaby National Institute of Oceanography and Fisheries (NIOF) Alexandria, Egypt. [email protected] ARTICLE INFO ABSTRACT Article History: Thirty-six Syllid species were identified in the Petro Gulf Misr Received: Nov. 19, 2019 Project (2017, 2018, 2019). 58 sediment samples were collected from Accepted: Dec. 20, 2019 the Suez Gulf (Gable El Zeit Area). The data revealed that 36 syllidae Online: Dec. 23, 2019 species were recorded; 19 of them are considered new recorded _______________ species reported for the first time during the present study (Species Keywords: with*). Of these species, 13 of them were previously reported in the Polychaetes Suez Canal. This research is considered a new addition to the family Syllidae monitoring work of polychaetes in the Gulf of Suez, supplied by data Suez Gulf and distribution of Syllidae species in the Suez Canal, Red Sea and Suez Canal Suez Gulf region. Adding notes of description for some. Red Sea INTRODUCTION Syllidae are small-sized polychaetes occurring on all substrates, the Syllidae are the most widespread family, including about 900 distinct species belonging to more than 80 genera with complicated morphological and ecological characteristics (Faulwetter et al. 2011). Many polychaetes studies have been conducted in the Suez Canal, Suez Gulf and Aqaba Gulf (Fauvel, 1927; Ben-Eliahu, 1972; Amoureux et al.; Wehe and Fiege, 2002; Hove et al., 2006). -
Indonesian Sponges of the Genus Petrosia Vosmaer (Demospongiae: Haplosclerida)
ZM 76 193-210 | 16 (de voogd) 12-01-2007 09:02 Page 193 Indonesian sponges of the genus Petrosia Vosmaer (Demospongiae: Haplosclerida) N.J. de Voogd & R.W.M. van Soest Voogd, N.J. de & R.W.M. van Soest. Indonesian sponges of the genus Petrosia Vosmaer (Demospon- giae: Haplosclerida). Zool. Med. Leiden 76 (16), 30.ix.2002: 193-209, figs 1-5.— ISSN 0024-0672. Nicole J. de Voogd1,2 & Rob W.M. van Soest1, 1 Institute for Biodiversity and Ecosystem Dynamics (Zoological Museum) University of Amsterdam, P.O. Box 94766 1090 GT Amsterdam, The Nether- lands (e-mail: [email protected]), and 2 National Museum of Natural History, P.O. Box 9517, 2300 RA Leiden, The Netherlands. Key words: Porifera; Haplosclerida; Petrosia (Petrosia); Petrosia (Strongylophora); Sulawesi; Eastern Indonesia. Sponges of the genus Petrosia (Demospongiae: Haplosclerida) are large and characteristic components of many Indonesian reefs. We identify and provide descriptions of seven species of Petrosia collected recently on SW Sulawesi reefs (Eastern Indonesia), two of which are new to science: Petrosia (Petrosia) alfiani spec. nov. and Petrosia (Petrosia) hoeksemai spec. nov. Additional species recorded are Petrosia (Petrosia) lignosa Wilson, 1925, Petrosia (Petrosia) nigricans Lindgren, 1897, Petrosia (Petrosia) plana Wilson, 1925, Petrosia (Strongylophora) corticata (Wilson, 1925) and Petrosia (Strongylophora) strongylata Thiele, 1903. The species are discussed and compared with Petrosia records from other Indonesian and neigh- bouring Indo-West Pacific areas. We also present a key to the common Petrosia species of Sulawesi. Introduction If trends observed in other marine benthic groups also apply to sponges, Indone- sian waters may be expected to contain the world’s highest sponge biodiversity. -
Collation and Validation of Museum Collection Databases Related to the Distribution of Marine Sponges in Northern Australia
1 COLLATION AND VALIDATION OF MUSEUM COLLECTION DATABASES RELATED TO THE DISTRIBUTION OF MARINE SPONGES IN NORTHERN AUSTRALIA. JOHN N.A. HOOPER & MERRICK EKINS 2 3 Collation and validation of museum collection databases related to the distribution of marine sponges in Northern Australia (Contract National Oceans Office C2004/020) John N.A. Hooper & Merrick Ekins Queensland Museum, PO Box 3300, South Brisbane, Queensland, 4101, Australia ([email protected], [email protected]) CONTENTS SUMMARY ......................................................................................................................... 6 1. INTRODUCTION ......................................................................................................... 10 1.1. General Introduction ..................................................................................... 10 1.2. Definitions of Australia’s marine bioregions ............................................... 12 2. MATERIALS & METHODS ....................................................................................... 16 2.1. Specimen point-data conversion ................................................................... 16 2.2. Geographic coverage and scales of analysis................................................. 18 2.3. Species distributions....................................................................................... 19 2.4. Modelled distribution datasets and historical sponge data ........................ 20 2.5. Identification of useful datasets and gaps in data, prioritised