Int. J. Biol. Sci. 2016, Vol. 12 156 Ivyspring International Publisher International Journal of Biological Sciences 2016; 12(2): 156-171. doi: 10.7150/ijbs.13537 Review Recent Developments in Using Advanced Sequencing Technologies for the Genomic Studies of Lignin and Cellulose Degrading Microorganisms Ayyappa kumar Sista Kameshwar, Wensheng Qin Department of Biology, Lakehead University, 955 Oliver Road, Thunder Bay, Ontario, P7B 5E1, Canada. Corresponding author: Email:
[email protected], Tel: 807-343-8467 © Ivyspring International Publisher. Reproduction is permitted for personal, noncommercial use, provided that the article is in whole, unmodified, and properly cited. See http://ivyspring.com/terms for terms and conditions. Received: 2015.08.12; Accepted: 2015.11.03; Published: 2016.01.01 Abstract Lignin is a complex polyphenyl aromatic compound which exists in tight associations with cellulose and hemicellulose to form plant primary and secondary cell wall. Lignocellulose is an abundant renewable biomaterial present on the earth. It has gained much attention in the scientific com- munity in recent years because of its potential applications in bio-based industries. Microbial degradation of lignocellulose polymers was well studied in wood decaying fungi. Based on the plant materials they degrade these fungi were classified as white rot, brown rot and soft rot. However, some groups of bacteria belonging to the actinomycetes, α-proteobacteria and β-proteobacteria were also found to be efficient in degrading lignocellulosic biomass but not well understood unlike the fungi. In this review we focus on recent advancements deployed for finding and understanding the lignocellulose degradation by microorganisms. Conventional molecular methods like se- quencing 16s rRNA and Inter Transcribed Spacer (ITS) regions were used for identification and classification of microbes.