Redalyc.Isolation and Identification of Fungi from Leaves Infected with False
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
Isolation and Identification of Fungi from Leaves Infected with False Mildew on Safflower Crops in the Yaqui Valley, Mexico
Isolation and identification of fungi from leaves infected with false mildew on safflower crops in the Yaqui Valley, Mexico Eber Addi Quintana-Obregón 1, Maribel Plascencia-Jatomea 1, Armando Burgos-Hérnandez 1, Pedro Figueroa-Lopez 2, Mario Onofre Cortez-Rocha 1 1 Departamento de Investigación y Posgrado en Alimentos, Universidad de Sonora, Blvd. Luis Encinas y Rosales s/n, Colonia Centro. C.P. 83000 Hermosillo, Sonora, México. 2 Campo Experimental Norman E. Borlaug-INIFAP. C. Norman Borlaug Km.12 Cd. Obregón, Sonora C.P. 85000 3 1 0 2 Aislamiento e identificación de hongos de las hojas infectadas con la falsa cenicilla , 7 en cultivos de cártamo en el Valle del Yaqui, México 2 - 9 1 Resumen. La falsa cenicilla es una enfermedad que afecta seriamente los cultivos de cártamo en : 7 3 el Valle del Yaqui, México, y es causada por la infección de un hongo perteneciente al género A Ramularia. En el presente estudio, un hongo aislado de hojas contaminadas fue cultivado bajo Í G diferentes condiciones de crecimiento con la finalidad de estudiar su desarrollo micelial y O L producción de esporas, determinándose que el medio sólido de , 18 C de O Septoria tritici ° C I incubación y fotoperiodos de 12 h luz-oscuridad, fueron las condiciones más adecuadas para el M desarrollo del hongo. Este aislamiento fue identificado morfológicamente como Ramularia E D , pero genómicamente como , por lo que no se puede cercosporelloides Cercosporella acroptili A aún concluir que especie causa esta enfermedad. Adicionalmente, en la periferia de las N A C infecciones estudiadas se detectó la presencia de Alternaria tenuissima y Cladosporium I X cladosporioides. -
Biotechnology of Neglected and Underutilized Crops Biotechnology of Neglected and Underutilized Crops Shri Mohan Jain · S
Shri Mohan Jain · S. Dutta Gupta Editors Biotechnology of Neglected and Underutilized Crops Biotechnology of Neglected and Underutilized Crops Shri Mohan Jain · S. Dutta Gupta Editors Biotechnology of Neglected and Underutilized Crops 1 3 Editors Shri Mohan Jain S. Dutta Gupta Department of Agricultural Sciences Department of Agricultural University of Helsinki and Food Engineering Helsinki Indian Institute of Technology Kharagpur Finland Kharagpur India ISBN 978-94-007-5499-7 ISBN 978-94-007-5500-0 (eBook) DOI 10.1007/978-94-007-5500-0 Springer Dordrecht Heidelberg New York London Library of Congress Control Number: 2013934379 © Springer Science+Business Media Dordrecht 2013 This work is subject to copyright. All rights are reserved by the Publisher, whether the whole or part of the material is concerned, specifically the rights of translation, reprinting, reuse of illustrations, recitation, broadcasting, reproduction on microfilms or in any other physical way, and transmission or information storage and retrieval, electronic adaptation, computer software, or by similar or dissimilar methodology now known or hereafter developed. Exempted from this legal reservation are brief excerpts in connection with reviews or scholarly analysis or material supplied specifically for the purpose of being entered and executed on a computer system, for exclusive use by the purchaser of the work. Duplication of this publication or parts thereof is permitted only under the provisions of the Copyright Law of the Publisher’s location, in its current version, and permission for use must always be obtained from Springer. Permissions for use may be obtained through RightsLink at the Copyright Clearance Center. Violations are liable to prosecution under the respective Copyright Law. -
The Genome of the Emerging Barley Pathogen Ramularia Collo-Cygni Graham R
McGrann et al. BMC Genomics (2016) 17:584 DOI 10.1186/s12864-016-2928-3 RESEARCHARTICLE Open Access The genome of the emerging barley pathogen Ramularia collo-cygni Graham R. D. McGrann1*†, Ambrose Andongabo2†, Elisabet Sjökvist1,4†, Urmi Trivedi5, Francois Dussart1, Maciej Kaczmarek1,6, Ashleigh Mackenzie1, James M. Fountaine1,7, Jeanette M. G. Taylor1, Linda J. Paterson1, Kalina Gorniak1, Fiona Burnett1, Kostya Kanyuka3, Kim E. Hammond-Kosack3, Jason J. Rudd3, Mark Blaxter4,5 and Neil D. Havis1 Abstract Background: Ramularia collo-cygni is a newly important, foliar fungal pathogen of barley that causes the disease Ramularia leaf spot. The fungus exhibits a prolonged endophytic growth stage before switching life habit to become an aggressive, necrotrophic pathogen that causes significant losses to green leaf area and hence grain yield and quality. Results: The R. collo-cygni genome was sequenced using a combination of Illumina and Roche 454 technologies. The draft assembly of 30.3 Mb contained 11,617 predicted gene models. Our phylogenomic analysis confirmed the classification of this ascomycete fungus within the family Mycosphaerellaceae, order Capnodiales of the class Dothideomycetes. A predicted secretome comprising 1053 proteins included redox- related enzymes and carbohydrate-modifying enzymes and proteases. The relative paucity of plant cell wall degrading enzyme genes may be associated with the stealth pathogenesis characteristic of plant pathogens from the Mycosphaerellaceae. A large number of genes associated with secondary metabolite production, including homologs of toxin biosynthesis genes found in other Dothideomycete plant pathogens, were identified. Conclusions: The genome sequence of R. collo-cygni provides a framework for understanding the genetic basis of pathogenesis in this important emerging pathogen. -
Ramularia Collo-Cygni Epidemic
bioRxiv preprint doi: https://doi.org/10.1101/215418; this version posted November 7, 2017. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY 4.0 International license. The evolutionary history of the current global Ramularia collo-cygni epidemic Remco Stam1§, Hind Sghyer1*, Martin Münsterkötter4,5*, Saurabh Pophaly2%, Aurélien Tellier2,Ulrich Güldener3, Ralph Hückelhoven1, Michael Hess1§ 1Chair of Phytopathology, 2Section of Population Genetics, 3 Chair of Genome-oriented Bioinformatics Center of Life and Food Sciences Weihenstephan, Technische Universität München, Germany 4Functional Genomics and Bioinformatics, University of Sopron, Hungary 5Institute of Bioinformatics and Systems Biology, Helmholtz Zentrum München, Germany * contributed equally to this work § correspondence: Remco Stam: [email protected] Michael Hess: m.hess@ tum .de % current address: Department of Evolutionary Biology, Evolutionary Biology Centre, Uppsala University, Sweden & Division of Evolutionary Biology, Faculty of Biology II, Ludwig-Maximilians-Universität München, Germany Abstract Ramularia Leaf Spot (RLS) has emerged as a threat for barley production in many regions of the world. Late appearance of unspecific symptoms caused that Ramularia collo-cygni could only by molecular diagnostics be detected as the causal agent of RLS. Although recent research has shed more light on the biology and genomics of the pathogen, the cause of the recent global spread remains unclear. To address urgent questions, especially on the emergence to a major disease, life-cycle, transmission, and quick adaptation to control measures, we de-novo sequenced the genome of R. -
First Report of Alternaria Carthami Causing Leaf Spots on Carthamus Tinctorius in Brazil
New Disease Reports (2016) 33, 3. http://dx.doi.org/10.5197/j.2044-0588.2016.033.003 First report of Alternaria carthami causing leaf spots on Carthamus tinctorius in Brazil J.L. Alves 1, R.M. Saraiva 1, E.S.G. Mizubuti 1, S.M.T.P.G. Carneiro 2, L.C. Borsato 2, J.H.C. Woudenberg 3 and V. Lourenço Jr. 4* 1 Universidade Federal de Viçosa, Departamento de Fitopatologia, 36570-000, Viçosa, Minas Gerais, Brazil; 2 Instituto Agronômico do Paraná – IAPAR, Área de Proteção de Plantas, 86047-902, Londrina, Paraná, Brazil; 3 CBS-KNAW Fungal Biodiversity Centre, P.O. Box 85167, 3508 AD, Utrecht, The Netherlands; 4 Embrapa Hortaliças, 70351-970, Brasília, Distrito Federal, Brazil *E-mail: [email protected] Received: 01 Oct 2015. Published: 22 Jan 2016. Keywords: Alternaria alternata, safflower Carthamus tinctorius (safflower) is an important commercial flower which The fungus was re-isolated from the inoculated plants and the morphology is cultivated mainly for its seeds, from which vegetable oil can be was the same as the inoculated isolate (Fig. 2). No symptoms developed in extracted. In March 2013, approximately 50% of the safflower cv. Goiás at control plants sprayed with distilled water. the Instituto Agronômico do Paraná in Londrina (Paraná, Brazil) showed At least seven species of Alternaria are recorded from C. tinctorius (Farr & brown spots with concentric rings on leaves and elongated or irregular Rossman, 2014). A. carthami is known as a destructive disease of safflower necrotic lesions on petioles, stems and flower heads. One distinct and is recorded worldwide. -
Isolation and Identification of Fungi from Leaves Infected with False Mildew on Safflower Crops in the Yaqui Valley, Mexico
Isolation and identification of fungi from leaves infected with false mildew on safflower crops in the Yaqui Valley, Mexico Eber Addi Quintana-Obregón 1, Maribel Plascencia-Jatomea 1, Armando Burgos-Hérnandez 1, Pedro Figueroa-Lopez 2, Mario Onofre Cortez-Rocha 1 1 Departamento de Investigación y Posgrado en Alimentos, Universidad de Sonora, Blvd. Luis Encinas y Rosales s/n, Colonia Centro. C.P. 83000 Hermosillo, Sonora, México. 2 Campo Experimental Norman E. Borlaug-INIFAP. C. Norman Borlaug Km.12 Cd. Obregón, Sonora C.P. 85000 3 1 0 2 Aislamiento e identificación de hongos de las hojas infectadas con la falsa cenicilla , 7 en cultivos de cártamo en el Valle del Yaqui, México 2 - 9 1 Resumen. La falsa cenicilla es una enfermedad que afecta seriamente los cultivos de cártamo en : 7 3 el Valle del Yaqui, México, y es causada por la infección de un hongo perteneciente al género A Ramularia. En el presente estudio, un hongo aislado de hojas contaminadas fue cultivado bajo Í G diferentes condiciones de crecimiento con la finalidad de estudiar su desarrollo micelial y O L producción de esporas, determinándose que el medio sólido de , 18 C de O Septoria tritici ° C I incubación y fotoperiodos de 12 h luz-oscuridad, fueron las condiciones más adecuadas para el M desarrollo del hongo. Este aislamiento fue identificado morfológicamente como Ramularia E D , pero genómicamente como , por lo que no se puede cercosporelloides Cercosporella acroptili A aún concluir que especie causa esta enfermedad. Adicionalmente, en la periferia de las N A C infecciones estudiadas se detectó la presencia de Alternaria tenuissima y Cladosporium I X cladosporioides. -
Genetic Glass Ceilings Gressel, Jonathan
Genetic Glass Ceilings Gressel, Jonathan Published by Johns Hopkins University Press Gressel, Jonathan. Genetic Glass Ceilings: Transgenics for Crop Biodiversity. Johns Hopkins University Press, 2008. Project MUSE. doi:10.1353/book.60335. https://muse.jhu.edu/. For additional information about this book https://muse.jhu.edu/book/60335 [ Access provided at 2 Oct 2021 23:39 GMT with no institutional affiliation ] This work is licensed under a Creative Commons Attribution 4.0 International License. Genetic Glass Ceilings Transgenics for Crop Biodiversity This page intentionally left blank Genetic Glass Ceilings Transgenics for Crop Biodiversity Jonathan Gressel Foreword by Klaus Ammann The Johns Hopkins University Press Baltimore © 2008 The Johns Hopkins University Press All rights reserved. Published 2008 Printed in the United States of America on acid-free paper 987654321 The Johns Hopkins University Press 2715 North Charles Street Baltimore, Maryland 21218-4363 www.press.jhu.edu Library of Congress Cataloging-in-Publication Data Gressel, Jonathan. Genetic glass ceilings : transgenics for crop biodiversity / Jonathan Gressel. p. cm. Includes bibliographical references and index. ISBN 13: 978-0-8018-8719-2 (hardcover : alk. paper) ISBN 10: 0-8018-8719-4 (hardcover : alk. paper) 1. Crops—Genetic engineering. 2. Transgenic plants. 3. Plant diversity. 4. Crop improvement. I. Title. II. Title: Transgenics for crop biodiversity. SB123.57.G74 2008 631.5Ј233—dc22 20007020365 A catalog record for this book is available from the British Library. Special discounts are available for bulk purchases of this book. For more information, please contact Special Sales at 410-516-6936 or [email protected]. Dedicated to the memory of Professor Leroy (Whitey) Holm, the person who stimulated me to think differently. -
<I>Ramularia</I> Species (Hyphomycetes)
ISSN (print) 0093-4666 © 2014. Mycotaxon, Ltd. ISSN (online) 2154-8889 MYCOTAXON http://dx.doi.org/10.5248/127.63 Volume 127, pp. 63–72 January–March 2014 Additions to Ramularia species (hyphomycetes) in Poland Małgorzata Ruszkiewicz-Michalska* & Ewa Połeć Department of Algology and Mycology, Faculty of Biology and Environmental Protection, University of Łódź, 12/16 Banacha Str., Łódź, PL–90–237, Poland * Correspondence to: [email protected] Abstract — The morphology and revised distribution of three Ramularia species (teleomorphs unknown) are presented based on fresh specimens. Ramularia melampyri is new for Poland, and R. celastri is reported from its third (and easternmost) locality in Europe. Ramularia abscondita specimens confirm the occurrence of this species in Poland. As R. melampyri hosts (Melampyrum spp.) are currently classified in Orobanchaceae, the implications of the new systematics of Scrophulariaceae s.l. for the taxonomy of Ramularia and related Mycosphaerella species are discussed briefly. Key words — microfungi, asexual morphs, plant parasites, biogeography, new records Introduction The genus Ramularia, described by Unger in 1833 (cf. Braun 1998), is one of the largest anamorph genera, with known teleomorphs classified in the ascomycetous genus Mycosphaerella Johanson (Braun 1998, Crous 2009). Mycosphaerella s.l. is polyphyletic, but its type species, M. punctiformis (Pers.) Starbäck, has a proven Ramularia anamorph (R. endophylla Verkley & U. Braun). Consequently, the name Mycosphaerella s.str. has been confined to sexual morphs associated with Ramularia anamorphs (Verkley et al. 2004, Crous et al. 2009a). According to the new rules of Art. 59 of the ICN (McNeill et al. 2012), Mycosphaerella and Ramularia are heterotypic synonyms, and so the older name Ramularia, which has priority, is now a holomorph name. -
Phylogeny of the Quambalariaceae Fam. Nov., Including Important Eucalyptus Pathogens in South Africa and Australia
View metadata, citation and similar papers at core.ac.uk brought to you by CORE STUDIES IN MYCOLOGY 55: 289–298. 2006. provided by Elsevier - Publisher Connector Phylogeny of the Quambalariaceae fam. nov., including important Eucalyptus pathogens in South Africa and Australia Z. Wilhelm de Beer1*, Dominik Begerow2, Robert Bauer2, Geoff S. Pegg3, Pedro W. Crous4 and Michael J. Wingfield1 1Department of Microbiology and Plant Pathology, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria, 0002, South Africa; 2Lehrstuhl Spezielle Botanik und Mykologie, Institut für Biologie I, Universität Tübingen, Auf der Morgenstelle 1, D-72076 Tübingen, Germany; 3Department of Primary Industries and Fisheries, Horticulture and Forestry Science, Indooroopilly, Brisbane 4068; 4Centraalbureau voor Schimmelcultures, Fungal Biodiversity Centre, P.O. Box 85167, 3508 AD, Utrecht, The Netherlands *Correspondence: Wilhelm de Beer, [email protected] Abstract: The genus Quambalaria consists of plant-pathogenic fungi causing disease on leaves and shoots of species of Eucalyptus and its close relative, Corymbia. The phylogenetic relationship of Quambalaria spp., previously classified in genera such as Sporothrix and Ramularia, has never been addressed. It has, however, been suggested that they belong to the basidiomycete orders Exobasidiales or Ustilaginales. The aim of this study was thus to consider the ordinal relationships of Q. eucalypti and Q. pitereka using ribosomal LSU sequences. Sequence data from the ITS nrDNA were used to determine the phylogenetic relationship of the two Quambalaria species together with Fugomyces (= Cerinosterus) cyanescens. In addition to sequence data, the ultrastructure of the septal pores of the species in question was compared. From the LSU sequence data it was concluded that Quambalaria spp. -
Functional Characterization of Polyketide-Derived
FUNCTIONAL CHARACTERIZATION OF POLYKETIDE-DERIVED SECONDARY METABOLITES SOLANAPYRONES PRODUCED BY THE CHICKPEA BLIGHT PATHOGEN, ASCOCHYTA RABIEI: GENETICS AND CHEMICAL ECOLOGY By WONYONG KIM A dissertation submitted in partial fulfillment of the requirements for the degree of DOCTOR OF PHILOSOPHY WASHINGTON STATE UNIVERSITY Department of Plant Pathology AUGUST 2015 To the Faculty of Washington State University: The members of the Committee appointed to examine the dissertation of WONYONG KIM find it satisfactory and recommend that it be accepted ___________________________________ Weidong Chen, Ph.D., Chair ___________________________________ Tobin L. Peever, Ph.D. ___________________________________ George J. Vandemark, Ph.D. ___________________________________ Lee A. Hadwiger, Ph.D. ___________________________________ Ming Xian, Ph.D. ii ACKNOWLEDGEMENTS I take this opportunity to thank my major advisor, Dr. Weidong Chen. I have learned a tremendous amount from him in framing hypothesis and critical thinking in science. He gave me every possible opportunity to attend conferences to present my research and interact with scientific communities. I would also like to thank my committee members Drs. Tobin L. Peever, George J. Va ndemark, Lee A. Hadwiger and Ming Xian for their open-door policy when questions arose and for giving me ideas and suggestions that helped develop this dissertation research. I am very fortunate to have such a nice group of committee members who are experts each in their own fields such as Systematics, Genetics, Molecular Biology and Chemistry. Without their expertise and helps the research presented in this dissertation could not have been carried out. I thank to Drs. Jeong-Jin Park and Chung-Min Park for long term collaboration during my doctoral study and being as good friends. -
A Worldwide List of Endophytic Fungi with Notes on Ecology and Diversity
Mycosphere 10(1): 798–1079 (2019) www.mycosphere.org ISSN 2077 7019 Article Doi 10.5943/mycosphere/10/1/19 A worldwide list of endophytic fungi with notes on ecology and diversity Rashmi M, Kushveer JS and Sarma VV* Fungal Biotechnology Lab, Department of Biotechnology, School of Life Sciences, Pondicherry University, Kalapet, Pondicherry 605014, Puducherry, India Rashmi M, Kushveer JS, Sarma VV 2019 – A worldwide list of endophytic fungi with notes on ecology and diversity. Mycosphere 10(1), 798–1079, Doi 10.5943/mycosphere/10/1/19 Abstract Endophytic fungi are symptomless internal inhabits of plant tissues. They are implicated in the production of antibiotic and other compounds of therapeutic importance. Ecologically they provide several benefits to plants, including protection from plant pathogens. There have been numerous studies on the biodiversity and ecology of endophytic fungi. Some taxa dominate and occur frequently when compared to others due to adaptations or capabilities to produce different primary and secondary metabolites. It is therefore of interest to examine different fungal species and major taxonomic groups to which these fungi belong for bioactive compound production. In the present paper a list of endophytes based on the available literature is reported. More than 800 genera have been reported worldwide. Dominant genera are Alternaria, Aspergillus, Colletotrichum, Fusarium, Penicillium, and Phoma. Most endophyte studies have been on angiosperms followed by gymnosperms. Among the different substrates, leaf endophytes have been studied and analyzed in more detail when compared to other parts. Most investigations are from Asian countries such as China, India, European countries such as Germany, Spain and the UK in addition to major contributions from Brazil and the USA. -
Diseases of Safflower
Scholars Academic Journal of Biosciences (SAJB) ISSN 2347-9515 (Print) Abbreviated Key Title: Sch. Acad. J. Biosci. ISSN 2321-6883 (Online) ©Scholars Academic and Scientific Publisher A Unit of Scholars Academic and Scientific Society, India Plant Sciences www.saspublisher.com Main diseases of safflower (Carthamus tinctorus L.) in Uzbekistan Yusuf Buranov1 1Scientific personnel of Uzbekistan, The Uzbek Scientific Research Institute of Protecting Plants, Tashkent, Uzbekistan Abstract: In Uzbekistan the disease of rust in safflower is widely spread. Furthermore, Original Research Article safflower is being partially diseased with Fusarium wilt, Alternaria and Ramularia leaf spots. It is important to carry out agro-technical issues in disease management, *Corresponding author neutralize seeds before planting, when strongly damaged it is appropriate to use Yusuf Buranov fungicides. Keywords: safflower, diseases, fungicides, spreading, agriculture, crop Article History Received: 12.12.2017 INTRODUCTION Accepted: 17.12.2017 Safflower – (Carthamus tinctorus L), is a one year valuable technical crop, Published:30.12.2017 originating from Afghanistan and Ethiopia. The roots are very deep stretching from 2 to 3 meters downwards. The crop of safflower is being grown in less irrigated lands or DOI: lands irrigated by rain water as it is resistant for drought and heat. Another distinctive feature of safflower is that it does not choose soil; the fertility of the crop does not 10.21276/sajb.2017.5.12.3 decrease noticeably even in sandy, rocky or salty soil. Its vegetal growth period lasts 95- 135 days. The fertility makes up average 8- 10 centners in irrigated lands by rain water and 20- 25 centners in irrigated lands.