A Major Qualifying Project Report Submitted to the Faculty of the WORCESTER POLYTECHNIC INSTITUTE in Partial Fulfillment Of
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
The Functional Parasitic Worm Secretome: Mapping the Place of Onchocerca Volvulus Excretory Secretory Products
pathogens Review The Functional Parasitic Worm Secretome: Mapping the Place of Onchocerca volvulus Excretory Secretory Products Luc Vanhamme 1,*, Jacob Souopgui 1 , Stephen Ghogomu 2 and Ferdinand Ngale Njume 1,2 1 Department of Molecular Biology, Institute of Biology and Molecular Medicine, IBMM, Université Libre de Bruxelles, Rue des Professeurs Jeener et Brachet 12, 6041 Gosselies, Belgium; [email protected] (J.S.); [email protected] (F.N.N.) 2 Molecular and Cell Biology Laboratory, Biotechnology Unit, University of Buea, Buea P.O Box 63, Cameroon; [email protected] * Correspondence: [email protected] Received: 28 October 2020; Accepted: 18 November 2020; Published: 23 November 2020 Abstract: Nematodes constitute a very successful phylum, especially in terms of parasitism. Inside their mammalian hosts, parasitic nematodes mainly dwell in the digestive tract (geohelminths) or in the vascular system (filariae). One of their main characteristics is their long sojourn inside the body where they are accessible to the immune system. Several strategies are used by parasites in order to counteract the immune attacks. One of them is the expression of molecules interfering with the function of the immune system. Excretory-secretory products (ESPs) pertain to this category. This is, however, not their only biological function, as they seem also involved in other mechanisms such as pathogenicity or parasitic cycle (molting, for example). Wewill mainly focus on filariae ESPs with an emphasis on data available regarding Onchocerca volvulus, but we will also refer to a few relevant/illustrative examples related to other worm categories when necessary (geohelminth nematodes, trematodes or cestodes). -
Gastrointestinal Helminthic Parasites of Habituated Wild Chimpanzees
Aus dem Institut für Parasitologie und Tropenveterinärmedizin des Fachbereichs Veterinärmedizin der Freien Universität Berlin Gastrointestinal helminthic parasites of habituated wild chimpanzees (Pan troglodytes verus) in the Taï NP, Côte d’Ivoire − including characterization of cultured helminth developmental stages using genetic markers Inaugural-Dissertation zur Erlangung des Grades eines Doktors der Veterinärmedizin an der Freien Universität Berlin vorgelegt von Sonja Metzger Tierärztin aus München Berlin 2014 Journal-Nr.: 3727 Gedruckt mit Genehmigung des Fachbereichs Veterinärmedizin der Freien Universität Berlin Dekan: Univ.-Prof. Dr. Jürgen Zentek Erster Gutachter: Univ.-Prof. Dr. Georg von Samson-Himmelstjerna Zweiter Gutachter: Univ.-Prof. Dr. Heribert Hofer Dritter Gutachter: Univ.-Prof. Dr. Achim Gruber Deskriptoren (nach CAB-Thesaurus): chimpanzees, helminths, host parasite relationships, fecal examination, characterization, developmental stages, ribosomal RNA, mitochondrial DNA Tag der Promotion: 10.06.2015 Contents I INTRODUCTION ---------------------------------------------------- 1- 4 I.1 Background 1- 3 I.2 Study objectives 4 II LITERATURE OVERVIEW --------------------------------------- 5- 37 II.1 Taï National Park 5- 7 II.1.1 Location and climate 5- 6 II.1.2 Vegetation and fauna 6 II.1.3 Human pressure and impact on the park 7 II.2 Chimpanzees 7- 12 II.2.1 Status 7 II.2.2 Group sizes and composition 7- 9 II.2.3 Territories and ranging behavior 9 II.2.4 Diet and hunting behavior 9- 10 II.2.5 Contact with humans 10 II.2.6 -
This Is an Open Access Document Downloaded from ORCA, Cardiff University's Institutional Repository
This is an Open Access document downloaded from ORCA, Cardiff University's institutional repository: http://orca.cf.ac.uk/117055/ This is the author’s version of a work that was submitted to / accepted for publication. Citation for final published version: Jorge, F., White, R.S.A. and Paterson, Rachel A. 2018. Hiding in the swamp: new capillariid nematode parasitizing New Zealand brown mudfish. Journal of Helminthology 92 (3) , pp. 379-386. 10.1017/S0022149X17000530 file Publishers page: http://dx.doi.org/10.1017/S0022149X17000530 <http://dx.doi.org/10.1017/S0022149X17000530> Please note: Changes made as a result of publishing processes such as copy-editing, formatting and page numbers may not be reflected in this version. For the definitive version of this publication, please refer to the published source. You are advised to consult the publisher’s version if you wish to cite this paper. This version is being made available in accordance with publisher policies. See http://orca.cf.ac.uk/policies.html for usage policies. Copyright and moral rights for publications made available in ORCA are retained by the copyright holders. Title: Hiding in the swamp: new capillariid nematode parasitizing New Zealand brown mudfish Authors: Fátima Jorge1, Richard S. A. White2 and Rachel A. Paterson1,3 Addresses: 1Department of Zoology, University of Otago, PO Box 56, Dunedin 9054, New Zealand; 2School of Biological Sciences, University of Canterbury, Private Bag 4800, Christchurch 8140, New Zealand; 3School of Biosciences, University of Cardiff, Cardiff, CF10 3AX, United Kingdom Running headline: Capillariid nematode parasitizing New Zealand mudfish Corresponding author: Fátima Jorge Department of Zoology, University of Otago, 340 Great King Street, PO Box 56, Dunedin 9054, New Zealand e-mail: [email protected] 1 Abstract The extent of New Zealand’s freshwater fish-parasite diversity has yet to be fully revealed, with host-parasite relationships still to be described from nearly half the known fish community. -
Redalyc.NEW HOST RECORDS and GEOGRAPHIC DISTRIBUTION OF
Mastozoología Neotropical ISSN: 0327-9383 [email protected] Sociedad Argentina para el Estudio de los Mamíferos Argentina Robles, María del Rosario; Navone, Graciela T. NEW HOST RECORDS AND GEOGRAPHIC DISTRIBUTION OF SPECIES OF Trichuris (NEMATODA: TRICHURIIDAE) IN RODENTS FROM ARGENTINA WITH AN UPDATED SUMMARY OF RECORDS FROM AMERICA Mastozoología Neotropical, vol. 21, núm. 1, 2014, pp. 67-78 Sociedad Argentina para el Estudio de los Mamíferos Tucumán, Argentina Available in: http://www.redalyc.org/articulo.oa?id=45731230008 How to cite Complete issue Scientific Information System More information about this article Network of Scientific Journals from Latin America, the Caribbean, Spain and Portugal Journal's homepage in redalyc.org Non-profit academic project, developed under the open access initiative Mastozoología Neotropical, 21(1):67-78, Mendoza, 2014 Copyright ©SAREM, 2014 Versión impresa ISSN 0327-9383 http://www.sarem.org.ar Versión on-line ISSN 1666-0536 Artículo NEW HOST RECORDS AND GEOGRAPHIC DISTRIBUTION OF SPECIES OF Trichuris (NEMATODA: TRICHURIIDAE) IN RODENTS FROM ARGENTINA WITH AN UPDATED SUMMARY OF RECORDS FROM AMERICA María del Rosario Robles and Graciela T. Navone Centro de Estudios Parasitológicos y de Vectores CEPAVE (CCT-CONICET La Plata) (UNLP), Calle 2 # 584, (1900) La Plata, Buenos Aires, Argentina [correspondence: María del Rosario Robles <[email protected]>]. ABSTRACT. Species of Trichuris have a cosmopolitan distribution and parasitize a broad range of mammalian hosts. Although, the prevalence and intensity of this genus depends on many factors, the life cycles and char- acteristics of the environment have been the main aspect used to explain their geographical distribution. In this paper, we provide new host and geographical records for the species of Trichuris from Sigmodontinae rodents in Argentina. -
Classification of Parasites BLY 459 First Lab Test (October 10, 2010)
Classification of Parasites BLY 459 First Lab Test (October 10, 2010) If a taxonomic name is not in bold type, you will not be held responsible for it on the lab exam. Terms and common names that may be asked are also listed. I have attempted to be consistent with the taxonomic schemes in your text as well as to list all slides and live specimens that were displayed. In addition to highlighted taxa, be familiar with, material in lab handouts (especially proper nomenclature), lab display sheets, as well as material presented in lecture. Questions about vectors and locations within hosts will be asked. Be able to recognize healthy from infected tissue. Phylum Platyhelminthes (Flatworms) Class Turbellaria Dugesia (=Planaria ) Free-living, anatomy, X-section Bdelloura horseshoe crab gills Class Monogenea Gyrodactylus , Neobenedenis, Ergocotyle gills of freshwater fish Neopolystoma urinary bladder of turtles Class Trematoda ( Flukes ) Subclass Digenea Life-cycle stages: Recognize miracidia, sporocyst, redia, cercaria , metacercaria, adults & anatomy, model Order ?? Hirudinella ventricosa wahoo stomach Nasitrema nasal cavity of bottlenose dolphin Order Strigeiformes Family Schistosomatidae Schistosoma japonicum adults, male & female, liver granuloma & healthy liver, ova, cercariae, no metacercariae, adults in mesenteric intestinal veins Order Echinostomatiformes Family Fasciolidae Fasciola hepatica sheep & human liver, liver fluke Order Plagiorchiformes Family Dicrocoeliidae Dicrocoelium & Eurytrema Cure for All Diseases by Hulda Clark, Paragonimus -
Ascaris Lumbricoides, Roundworm, Causative Agent Of
http://www.MetaPathogen.com: Human roundworm, Ascaris lumbricoides ● Ascaris lumbricoides taxonomy ● Brief facts ● Developmental stages ● Treatment ● References Ascaris lumbricoides taxonomy cellular organisms - Eukaryota - Fungi/Metazoa group - Metazoa - Eumetazoa - Bilateria - Pseudocoelomata - Nematoda - Chromadorea - Ascaridida - Ascaridoidea - Ascarididae - Ascaris - Ascaris lumbricoides Brief facts ● Together with human hookworms (Ancylostoma duodenale and Necator americanus also described at MetaPathogen) and whipworms (Trichuris trichiura), Ascaris lumbricoides (human roundworms) belong to a group of so-called soil-transmitted helminths that represent one of the world's most important causes of physical and intellectual growth retardation. ● Today, ascariasis is among the most important tropical diseases in humans with more than billion infected people world-wide. Ascariasis is mostly seen in tropical and subtropical countries because of warm and humid conditions that facilitate development and survival of eggs. The majority of infections occur in Asia (up to 73%), followed by Africa (~12%) and Latin America (~8%). ● Ascaris lumbricoides is one of six worms listed and named by Linnaeus. Its name has remained unchanged up to date. ● Ascariasis is an ancient infection, and A. lumbricoides have been found in human remains from Peru dating as early as 2277 BC. There are records of A. lumbricoides in Egyptian mummy dating from 1938 to 1600 BC. Despite of long history of awareness and scientific observations, the parasite's life cycle in humans, including the migration of the larval stages around the body, was discovered only in 1922 by a Japanese pediatrician, Shimesu Koino. ● Unlike the hookworm, whose third-stage (L3) larvae actively penetrate skin, A. lumbricoides (as well as T. trichiura) is transmitted passively within the eggs after being swallowed by the host as a result of fecal contamination. -
Worms, Nematoda
University of Nebraska - Lincoln DigitalCommons@University of Nebraska - Lincoln Faculty Publications from the Harold W. Manter Laboratory of Parasitology Parasitology, Harold W. Manter Laboratory of 2001 Worms, Nematoda Scott Lyell Gardner University of Nebraska - Lincoln, [email protected] Follow this and additional works at: https://digitalcommons.unl.edu/parasitologyfacpubs Part of the Parasitology Commons Gardner, Scott Lyell, "Worms, Nematoda" (2001). Faculty Publications from the Harold W. Manter Laboratory of Parasitology. 78. https://digitalcommons.unl.edu/parasitologyfacpubs/78 This Article is brought to you for free and open access by the Parasitology, Harold W. Manter Laboratory of at DigitalCommons@University of Nebraska - Lincoln. It has been accepted for inclusion in Faculty Publications from the Harold W. Manter Laboratory of Parasitology by an authorized administrator of DigitalCommons@University of Nebraska - Lincoln. Published in Encyclopedia of Biodiversity, Volume 5 (2001): 843-862. Copyright 2001, Academic Press. Used by permission. Worms, Nematoda Scott L. Gardner University of Nebraska, Lincoln I. What Is a Nematode? Diversity in Morphology pods (see epidermis), and various other inverte- II. The Ubiquitous Nature of Nematodes brates. III. Diversity of Habitats and Distribution stichosome A longitudinal series of cells (sticho- IV. How Do Nematodes Affect the Biosphere? cytes) that form the anterior esophageal glands Tri- V. How Many Species of Nemata? churis. VI. Molecular Diversity in the Nemata VII. Relationships to Other Animal Groups stoma The buccal cavity, just posterior to the oval VIII. Future Knowledge of Nematodes opening or mouth; usually includes the anterior end of the esophagus (pharynx). GLOSSARY pseudocoelom A body cavity not lined with a me- anhydrobiosis A state of dormancy in various in- sodermal epithelium. -
Monophyly of Clade III Nematodes Is Not Supported by Phylogenetic Analysis of Complete Mitochondrial Genome Sequences
UC Davis UC Davis Previously Published Works Title Monophyly of clade III nematodes is not supported by phylogenetic analysis of complete mitochondrial genome sequences Permalink https://escholarship.org/uc/item/7509r5vp Journal BMC Genomics, 12(1) ISSN 1471-2164 Authors Park, Joong-Ki Sultana, Tahera Lee, Sang-Hwa et al. Publication Date 2011-08-03 DOI http://dx.doi.org/10.1186/1471-2164-12-392 Peer reviewed eScholarship.org Powered by the California Digital Library University of California Park et al. BMC Genomics 2011, 12:392 http://www.biomedcentral.com/1471-2164/12/392 RESEARCHARTICLE Open Access Monophyly of clade III nematodes is not supported by phylogenetic analysis of complete mitochondrial genome sequences Joong-Ki Park1*, Tahera Sultana2, Sang-Hwa Lee3, Seokha Kang4, Hyong Kyu Kim5, Gi-Sik Min2, Keeseon S Eom6 and Steven A Nadler7 Abstract Background: The orders Ascaridida, Oxyurida, and Spirurida represent major components of zooparasitic nematode diversity, including many species of veterinary and medical importance. Phylum-wide nematode phylogenetic hypotheses have mainly been based on nuclear rDNA sequences, but more recently complete mitochondrial (mtDNA) gene sequences have provided another source of molecular information to evaluate relationships. Although there is much agreement between nuclear rDNA and mtDNA phylogenies, relationships among certain major clades are different. In this study we report that mtDNA sequences do not support the monophyly of Ascaridida, Oxyurida and Spirurida (clade III) in contrast to results for nuclear rDNA. Results from mtDNA genomes show promise as an additional independently evolving genome for developing phylogenetic hypotheses for nematodes, although substantially increased taxon sampling is needed for enhanced comparative value with nuclear rDNA. -
Kinomes of Selected Parasitic Helminths - Fundamental and Applied Implications
KINOMES OF SELECTED PARASITIC HELMINTHS - FUNDAMENTAL AND APPLIED IMPLICATIONS Andreas Julius Stroehlein BSc (Bingen am Rhein, Germany) MSc (Berlin, Germany) ORCID ID 0000-0001-9432-9816 Submitted in fulfilment of the requirements of the degree of Doctor of Philosophy July 2017 Melbourne Veterinary School, Faculty of Veterinary and Agricultural Sciences, The University of Melbourne Produced on archival quality paper ii SUMMARY ________________________________________________________________ Worms (helminths) are a large, paraphyletic group of organisms including free-living and parasitic representatives. Among the latter, many species of roundworms (phylum Nematoda) and flatworms (phylum Platyhelminthes) are of major socioeconomic importance worldwide, causing debilitating diseases in humans and livestock. Recent advances in molecular technologies have allowed for the analysis of genomic and transcriptomic data for a range of helminth species. In this context, studying molecular signalling pathways in these species is of particular interest and should help to gain a deeper understanding of the evolution and fundamental biology of parasitism among these species. To this end, the objective of the present thesis was to characterise and curate the protein kinase complements (kinomes) of parasitic worms based on available transcriptomic data and draft genome sequences using a bioinformatic workflow in order to increase our understanding of how kinase signalling regulates fundamental biology and also to gain new insights into the evolution of protein kinases in parasitic worms. In addition, this work also aimed to investigate protein kinases with regard to their potential as useful targets for the development of novel anthelmintic small-molecule agents. This thesis consists of a literature review, four chapters describing original research findings and a general discussion. -
"Structure, Function and Evolution of the Nematode Genome"
Structure, Function and Advanced article Evolution of The Article Contents . Introduction Nematode Genome . Main Text Online posting date: 15th February 2013 Christian Ro¨delsperger, Max Planck Institute for Developmental Biology, Tuebingen, Germany Adrian Streit, Max Planck Institute for Developmental Biology, Tuebingen, Germany Ralf J Sommer, Max Planck Institute for Developmental Biology, Tuebingen, Germany In the past few years, an increasing number of draft gen- numerous variations. In some instances, multiple alter- ome sequences of multiple free-living and parasitic native forms for particular developmental stages exist, nematodes have been published. Although nematode most notably dauer juveniles, an alternative third juvenile genomes vary in size within an order of magnitude, com- stage capable of surviving long periods of starvation and other adverse conditions. Some or all stages can be para- pared with mammalian genomes, they are all very small. sitic (Anderson, 2000; Community; Eckert et al., 2005; Nevertheless, nematodes possess only marginally fewer Riddle et al., 1997). The minimal generation times and the genes than mammals do. Nematode genomes are very life expectancies vary greatly among nematodes and range compact and therefore form a highly attractive system for from a few days to several years. comparative studies of genome structure and evolution. Among the nematodes, numerous parasites of plants and Strikingly, approximately one-third of the genes in every animals, including man are of great medical and economic sequenced nematode genome has no recognisable importance (Lee, 2002). From phylogenetic analyses, it can homologues outside their genus. One observes high rates be concluded that parasitic life styles evolved at least seven of gene losses and gains, among them numerous examples times independently within the nematodes (four times with of gene acquisition by horizontal gene transfer. -
Molecular Phylogenetic Studies of the Genus Brugia Hong Xie Yale Medical School
Smith ScholarWorks Biological Sciences: Faculty Publications Biological Sciences 1994 Molecular Phylogenetic Studies of the Genus Brugia Hong Xie Yale Medical School O. Bain Biologie Parasitaire, Protistologie, Helminthologie, Museum d’Histoire Naturelle Steven A. Williams Smith College, [email protected] Follow this and additional works at: https://scholarworks.smith.edu/bio_facpubs Part of the Biology Commons Recommended Citation Xie, Hong; Bain, O.; and Williams, Steven A., "Molecular Phylogenetic Studies of the Genus Brugia" (1994). Biological Sciences: Faculty Publications, Smith College, Northampton, MA. https://scholarworks.smith.edu/bio_facpubs/37 This Article has been accepted for inclusion in Biological Sciences: Faculty Publications by an authorized administrator of Smith ScholarWorks. For more information, please contact [email protected] Article available at http://www.parasite-journal.org or http://dx.doi.org/10.1051/parasite/1994013255 MOLECULAR PHYLOGENETIC STUDIES ON BRUGIA FILARIAE USING HHA I REPEAT SEQUENCES XIE H.*, BAIN 0.** and WILLIAMS S. A.*,*** Summary : Résumé : ETUDES PHYLOGÉNÉTIQUES MOLÉCULAIRES DES FILAIRES DU GENRE BRUGIA À L'AIDE DE: LA SÉQUENCE RÉPÉTÉE HHA I This paper is the first molecular phylogenetic study on Brugia para• sites (family Onchocercidae) which includes 6 of the 10 species Cet article est la première étude plylogénétique moléculaire sur les of this genus : B. beaveri Ash et Little, 1964; B. buckleyi filaires du genre Brugia (Onchocercidae); elle inclut six des 10 Dissanaike et Paramananthan, 1961 ; B. malayi (Brug,1927) espèces du genre : B. beaveri Ash et Little, 1964; B. buckleyi Buckley, 1960 ; B. pohangi, (Buckley et Edeson, 1956) Buckley, Dissanaike et Paramananthan, 1961; B. malayi (Brug, 1927) 1960; B. patei (Buckley, Nelson et Heisch,1958) Buckley, 1960 Buckley, 1960; B. -
Molecular Characterization of Β-Tubulin Isotype-1 Gene of Bunostomum Trigonocephalum
Int.J.Curr.Microbiol.App.Sci (2018) 7(7): 3351-3358 International Journal of Current Microbiology and Applied Sciences ISSN: 2319-7706 Volume 7 Number 07 (2018) Journal homepage: http://www.ijcmas.com Original Research Article https://doi.org/10.20546/ijcmas.2018.707.390 Molecular Characterization of β-Tubulin Isotype-1 Gene of Bunostomum trigonocephalum Ravi Kumar Khare1, A. Dixit3, G. Das4, A. Kumar1, K. Rinesh3, D.S. Khare4, D. Bhinsara1, Mohar Singh2, B.C. Parthasarathi2, P. Dipali2, M. Shakya5, J. Jayraw5, D. Chandra2 and M. Sankar1* 1Division of Temperate Animal Husbandry, ICAR- IVRI, Mukteswar, India 2IVRI, Izatnagar, India 3College of Veterinary Science and A.H., Rewa, India 4College of Veterinary Sciences and A.H., Jabalpur, India 5College of Veterinary Sciences and A.H., Mhow, India *Corresponding author ABSTRACT The mechanism of benzimidazoles resistance is linked to single nucleotide polymorphisms (SNPs) on beta -tubulin isotype-1 gene. The three known SNPs responsible for BZ K e yw or ds resistance are F200Y, F167Y and E198A on the beta-tubulin isotype-1. The present study was aimed to characterize beta-tubulin isotype-1 gene of Bunostomum trigonocephalum, Benzimidazole for identifying variations on possible mutation sites. The adult parasites were collected resistance, Beta from Mukteswar, Uttarakhand. The parasites were thoroughly examined morphologically tubulin, and male parasites were subjected for RNA isolation. Complementary DNA (cDNA) was Bunostomum synthesised from total RNA using OdT. The PCR was performed using cDNA and self trigonocephalum, Small ruminants designed degenerative primers. The purified PCR amplicons were cloned into pGEMT easy vector and custom sequenced. The obtained sequences were analysed using DNA Article Info STAR, MEGA7.0 and Gene tool software.