Development of a Cell Suspension Culture System for Promoting Alkaloid and Vinca Alkaloid Biosynthesis Using Endophytic Fungi Isolated from Local Catharanthus Roseus
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Biodiversity of Wood-Decay Fungi in Italy
AperTO - Archivio Istituzionale Open Access dell'Università di Torino Biodiversity of wood-decay fungi in Italy This is the author's manuscript Original Citation: Availability: This version is available http://hdl.handle.net/2318/88396 since 2016-10-06T16:54:39Z Published version: DOI:10.1080/11263504.2011.633114 Terms of use: Open Access Anyone can freely access the full text of works made available as "Open Access". Works made available under a Creative Commons license can be used according to the terms and conditions of said license. Use of all other works requires consent of the right holder (author or publisher) if not exempted from copyright protection by the applicable law. (Article begins on next page) 28 September 2021 This is the author's final version of the contribution published as: A. Saitta; A. Bernicchia; S.P. Gorjón; E. Altobelli; V.M. Granito; C. Losi; D. Lunghini; O. Maggi; G. Medardi; F. Padovan; L. Pecoraro; A. Vizzini; A.M. Persiani. Biodiversity of wood-decay fungi in Italy. PLANT BIOSYSTEMS. 145(4) pp: 958-968. DOI: 10.1080/11263504.2011.633114 The publisher's version is available at: http://www.tandfonline.com/doi/abs/10.1080/11263504.2011.633114 When citing, please refer to the published version. Link to this full text: http://hdl.handle.net/2318/88396 This full text was downloaded from iris - AperTO: https://iris.unito.it/ iris - AperTO University of Turin’s Institutional Research Information System and Open Access Institutional Repository Biodiversity of wood-decay fungi in Italy A. Saitta , A. Bernicchia , S. P. Gorjón , E. -
Coprophilous Fungal Community of Wild Rabbit in a Park of a Hospital (Chile): a Taxonomic Approach
Boletín Micológico Vol. 21 : 1 - 17 2006 COPROPHILOUS FUNGAL COMMUNITY OF WILD RABBIT IN A PARK OF A HOSPITAL (CHILE): A TAXONOMIC APPROACH (Comunidades fúngicas coprófilas de conejos silvestres en un parque de un Hospital (Chile): un enfoque taxonómico) Eduardo Piontelli, L, Rodrigo Cruz, C & M. Alicia Toro .S.M. Universidad de Valparaíso, Escuela de Medicina Cátedra de micología, Casilla 92 V Valparaíso, Chile. e-mail <eduardo.piontelli@ uv.cl > Key words: Coprophilous microfungi,wild rabbit, hospital zone, Chile. Palabras clave: Microhongos coprófilos, conejos silvestres, zona de hospital, Chile ABSTRACT RESUMEN During year 2005-through 2006 a study on copro- Durante los años 2005-2006 se efectuó un estudio philous fungal communities present in wild rabbit dung de las comunidades fúngicas coprófilos en excementos de was carried out in the park of a regional hospital (V conejos silvestres en un parque de un hospital regional Region, Chile), 21 samples in seven months under two (V Región, Chile), colectándose 21 muestras en 7 meses seasonable periods (cold and warm) being collected. en 2 períodos estacionales (fríos y cálidos). Un total de Sixty species and 44 genera as a total were recorded in 60 especies y 44 géneros fueron detectados en el período the sampling period, 46 species in warm periods and 39 de muestreo, 46 especies en los períodos cálidos y 39 en in the cold ones. Major groups were arranged as follows: los fríos. La distribución de los grandes grupos fue: Zygomycota (11,6 %), Ascomycota (50 %), associated Zygomycota(11,6 %), Ascomycota (50 %), géneros mitos- mitosporic genera (36,8 %) and Basidiomycota (1,6 %). -
Gut Mycobiome of Primary Sclerosing Cholangitis Patients Is Characterised
PostScript LETTER a functional and potentially pathogenic 5.8S-Fun and ITS4-Fun on an Illumina link between the intestinal bacteriota and MiSeq machine. Sequencing data were Gut: first published as 10.1136/gutjnl-2019-320008 on 25 October 2019. Downloaded from 2 3 Gut mycobiome of primary liver inflammation in PSC, the aetiology subjected to quality control by using the of the disease remains largely unknown. open source package DADA2 (V.1.10)5 sclerosing cholangitis patients We here report on the fungal myco- in R (V.3.5.1; https:// github. com/ mrue- is characterised by an increase biome results of our cohort from hlemann/ ikmb_ amplicon_ processing). of Trichocladium griseum and Northern Germany approved by the Amplicon sequence variants were taxo- local ethics committees (A148/14 and nomically annotated using the UNITE ITS Candida species MC-111/15) comprising stool samples database (V.7.2).6 of 66 healthy control (HC) subjects, 65 In disagreement with the findings in 1 LETTER TO THE EDITOR patients with well-characterised PSC the French cohort, overall fungal alpha We read with interest the recent Gut article (including a subgroup with concomitant diversity in the German cohort was by Lemoinne et al describing a dysbiosis colitis (PSC-IBD), n=32) and 38 subjects neither altered in PSC nor in UC versus of the fungal gut community in faeces of with UC.3 PCR and sequencing of the HC as calculated by Shannon species patients suffering from primary sclerosing fungus-specific internal transcribed spacer equivalent (figure 1A). None of the cholangitis (PSC).1 Though several reports, 2 genomic region was performed as previ- disease groups significantly deviated in including our own previous data, support ously described4 using the primer pair community composition from healthy http://gut.bmj.com/ on September 28, 2021 by guest. -
On a New Species of Chaetomidium, C. Vicugnae, with a Cephalothecoid
On a new species of Chaetomidium, C. vicugnae, with a cepha- lothecoid peridium and its relationships with Chaetomiaceae (Sordariales) Francesco DOVERI Abstract: a sample of vicuña dung from a Chilean coastal desert was submitted to the attention of the au- thor, who at first sight noticed the presence of different pyrenomycetes. several hairy cleistothecia particu- larly caught his attention and were subjected to a morphological study that proved them to belong to a new species of Chaetomidium. after mentioning the main features of Sordariales and Chaetomiaceae, the author describes in detail the macro-and microscopic characters of the new species Chaetomidium vicugnae Ascomycete.org, 10 (2) : 86–96 and compares it with all the other Chaetomidium spp. with a cephalothecoid peridium. The extensive dis- Mise en ligne le 22/04/2018 cussion focuses on the characterization and relationships of the genus Chaetomidium and Chaetomidium 10.25664/ART-0231 vicugnae within the complex family Chaetomiaceae. all collections of the related species are recorded and dung is regarded as the preferential substrate. Keys are provided to sexual morph genera of Chaetomiaceae and to Chaetomidium species with a cephalothecoid peridium. Keywords: ascomycota, coprophily, germination, homoplasy, morphology, peridial frame, systematics. Introduction zing the importance of a future systematic study of vicuña dung for a better knowledge of the generic relationships in this family. My studies on coprophilous ascomycetes (Doveri, 2004, 2011) al- lowed me to meet with several representatives of Sordariales Cha- Materials and methods def. ex D. Hawksw. & o.e. erikss., an order identifiable with the so called “pyrenomycetes” s.str., i.e. -
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Cryptogamie, Mycologie, 2016, 37 (4): 449-475 © 2016 Adac. Tous droits réservés Fuscosporellales, anew order of aquatic and terrestrial hypocreomycetidae (Sordariomycetes) Jing YANG a, Sajeewa S. N. MAHARACHCHIKUMBURA b,D.Jayarama BHAT c,d, Kevin D. HYDE a,g*,Eric H. C. MCKENZIE e,E.B.Gareth JONES f, Abdullah M. AL-SADI b &Saisamorn LUMYONG g* a Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100, Thailand b Department of Crop Sciences, College of Agricultural and Marine Sciences, Sultan Qaboos University,P.O.Box 34, Al-Khod 123, Oman c Formerly,Department of Botany,Goa University,Goa, India d No. 128/1-J, Azad Housing Society,Curca, P.O. Goa Velha 403108, India e Manaaki Whenua LandcareResearch, Private Bag 92170, Auckland, New Zealand f Department of Botany and Microbiology,College of Science, King Saud University,P.O.Box 2455, Riyadh 11451, Kingdom of Saudi Arabia g Department of Biology,Faculty of Science, Chiang Mai University, Chiang Mai 50200, Thailand Abstract – Five new dematiaceous hyphomycetes isolated from decaying wood submerged in freshwater in northern Thailand are described. Phylogenetic analyses of combined LSU, SSU and RPB2 sequence data place these hitherto unidentified taxa close to Ascotaiwania and Bactrodesmiastrum. Arobust clade containing anew combination Pseudoascotaiwania persoonii, Bactrodesmiastrum species, Plagiascoma frondosum and three new species, are introduced in the new order Fuscosporellales (Hypocreomycetidae, Sordariomycetes). A sister relationship for Fuscosporellales with Conioscyphales, Pleurotheciales and Savoryellales is strongly supported by sequence data. Taxonomic novelties introduced in Fuscosporellales are four monotypic genera, viz. Fuscosporella, Mucispora, Parafuscosporella and Pseudoascotaiwania.Anew taxon in its asexual morph is proposed in Ascotaiwania based on molecular data and cultural characters. -
A Taxonomic and Phylogenetic Investigation of Conifer Endophytes
A Taxonomic and Phylogenetic Investigation of Conifer Endophytes of Eastern Canada by Joey B. Tanney A thesis submitted to the Faculty of Graduate and Postdoctoral Affairs in partial fulfillment of the requirements for the degree of Doctor of Philosophy in Biology Carleton University Ottawa, Ontario © 2016 Abstract Research interest in endophytic fungi has increased substantially, yet is the current research paradigm capable of addressing fundamental taxonomic questions? More than half of the ca. 30,000 endophyte sequences accessioned into GenBank are unidentified to the family rank and this disparity grows every year. The problems with identifying endophytes are a lack of taxonomically informative morphological characters in vitro and a paucity of relevant DNA reference sequences. A study involving ca. 2,600 Picea endophyte cultures from the Acadian Forest Region in Eastern Canada sought to address these taxonomic issues with a combined approach involving molecular methods, classical taxonomy, and field work. It was hypothesized that foliar endophytes have complex life histories involving saprotrophic reproductive stages associated with the host foliage, alternative host substrates, or alternate hosts. Based on inferences from phylogenetic data, new field collections or herbarium specimens were sought to connect unidentifiable endophytes with identifiable material. Approximately 40 endophytes were connected with identifiable material, which resulted in the description of four novel genera and 21 novel species and substantial progress in endophyte taxonomy. Endophytes were connected with saprotrophs and exhibited reproductive stages on non-foliar tissues or different hosts. These results provide support for the foraging ascomycete hypothesis, postulating that for some fungi endophytism is a secondary life history strategy that facilitates persistence and dispersal in the absence of a primary host. -
Pest Risk Analysis (PRA) of Coconut in Bangladesh
Government of the People’s Republic of Bangladesh Office of the Project Director Strengthening Phytosanitary Capacity in Bangladesh Project Plant Quarantine Wing Department of Agricultural Extension Khamarbari, Farmgate, Dhaka-1205 Pest Risk Analysis (PRA) of Coconut in Bangladesh May 2017 Government of the People’s Republic of Bangladesh Ministry of Agriculture Office of the Project Director Strengthening Phytosanitary Capacity in Bangladesh Project Plant Quarantine Wing Department of Agricultural Extension Khamarbari, Farmgate, Dhaka-1205 Pest Risk Analysis (PRA) of Sesame in Bangladesh DTCL Development Technical Consultants Pvt. Ltd (DTCL) JB House, Plot-62, Road-14/1, Block-G, Niketon Gulshan -1, Dhaka-1212, Bangladesh Tel: 88-02-9856438, 9856439 Fax: 88-02-9840973 E-mail: [email protected] Website: www.dtcltd.org MAY 2017 REPORT ON PEST RISK ANALYSIS (PRA) OF SESAME IN BANGLADESH Panel of Authors Prof. Dr. Md. Razzab Ali Team Leader Prof. Dr. Mahbuba Jahan Entomologist Prof. Dr. M. Salahuddin M. Chowdhury Plant pathologist Md. Lutfor Rahman Agronomist Dr. Bazlul Ameen Ahmad Mustafi Economist DTCL Management Kbd. Md. Habibur Rahman Chief Coordinator, Study Team Md. Mahabub Alam Coordinator, Study Team Reviewed by Md. Ahsan Ullah Consultant (PRA) Submitted to Strengthening Phytosanitary Capacity in Bangladesh (SPCB) Project Plant Quarantine Wing, Department of Agricultural Extension Khamarbari, Farmgate, Dhaka Submitted by Development Technical Consultants Pvt. Ltd. (DTCL) DTCL JB House, Plot-62, Road-14/1, Block-G, Niketon Gulsan-1, Dhaka-1212, Bangladesh. Tel: 88-02-9856438, 9856439, Fax: 88-02-9840973 E-mail: [email protected] , Website: www.dtcltd.org FORWARD The Strengthening Phytosanitary Capacity in Bangladesh (SPCB) Project under Plant Quarantine Wing (PQW), Department of Agricultural Extension (DAE), Ministry of Agriculture conducted the study for the “Pest Risk Analysis (PRA) of Sesame in Bangladesh” according to the provision of contract agreement signed between SPCB-DAE and Development Technical Consultants Pvt. -
The Isolation and Identification of Fungi from the Soil in Gardens of Cabbage Were Contaminated with Pesticide Residues in Subdistrict Modoinding
International Journal of Research in Engineering and Science (IJRES) ISSN (Online): 2320-9364, ISSN (Print): 2320-9356 www.ijres.org Volume 4 Issue 7 ǁ July. 2016 ǁ PP. 25-32 The Isolation and Identification of Fungi from the Soil in Gardens of Cabbage Were Contaminated with Pesticide Residues in Subdistrict Modoinding Stella D. Umboh1), Christina L. Salaki2), Max Tulung2), Lucia C. Mandey2), And Redsway T.D. Maramis2) 1) Doctoral Student at the University of Sam Ratulangi, Manado, North Sulawesi, Indonesia. Mobile Phone: + 62- 81340091042. E-mail: [email protected] 2) Faculty of Agriculture, University of Sam Ratulangi, Manado, North Sulawesi Abstract: Application of pesticides in the garden cabbage can cause negative effects harmful to the environment and living things. The objectives of this research were to get species of fungi from the soil in the gardens of cabbage contaminated with pesticide residues in Subdistrict Modoinding. Isolation of fungi using dilution plate method with serial dilutions of 10-2 to 10-5 on Potato Dextrose Agar (PDA). Of the five soil treatments in the gardens of cabbage obtained 76 isolates of the fungus. Isolates of soil fungi that were successfully identified macroscopically and microscopically. These fungal isolates included in 13 families and 22 species. Fungal species according to the following families: Endomycetaceae (Geotrichum candidum), Trichocomaceae (Penicillium citrinum, Aspergillus fumigatus, Aspergillus nidulans, Paecilomyces lilacinus, Aspergillus foot cell, Aspergillus sydowii, Aspergillus flavus, Aspergillus terreus and Aspergillus niger), Sordariaceae (Chrysonilia sitophila), Mucoraceae (Mucor hiemalis), Pleurostomataceae (Pleurostmophora richardsiae), Hypocreaceae (Gliocladium virens), Pythiaceae (Phytophthora infestans), Chaetomiaceae (Humicola fuscoatra), Eremomycetaceae (Arthrographis cuboidea), incertae sedis (Scytalidium lignicola), Bionectriaceae (Gliocladium roseum) and Arthrodermataceae (Microsporum audouinii). -
Molecular Systematics of the Sordariales: the Order and the Family Lasiosphaeriaceae Redefined
Mycologia, 96(2), 2004, pp. 368±387. q 2004 by The Mycological Society of America, Lawrence, KS 66044-8897 Molecular systematics of the Sordariales: the order and the family Lasiosphaeriaceae rede®ned Sabine M. Huhndorf1 other families outside the Sordariales and 22 addi- Botany Department, The Field Museum, 1400 S. Lake tional genera with differing morphologies subse- Shore Drive, Chicago, Illinois 60605-2496 quently are transferred out of the order. Two new Andrew N. Miller orders, Coniochaetales and Chaetosphaeriales, are recognized for the families Coniochaetaceae and Botany Department, The Field Museum, 1400 S. Lake Shore Drive, Chicago, Illinois 60605-2496 Chaetosphaeriaceae respectively. The Boliniaceae is University of Illinois at Chicago, Department of accepted in the Boliniales, and the Nitschkiaceae is Biological Sciences, Chicago, Illinois 60607-7060 accepted in the Coronophorales. Annulatascaceae and Cephalothecaceae are placed in Sordariomyce- Fernando A. FernaÂndez tidae inc. sed., and Batistiaceae is placed in the Euas- Botany Department, The Field Museum, 1400 S. Lake Shore Drive, Chicago, Illinois 60605-2496 comycetes inc. sed. Key words: Annulatascaceae, Batistiaceae, Bolini- aceae, Catabotrydaceae, Cephalothecaceae, Ceratos- Abstract: The Sordariales is a taxonomically diverse tomataceae, Chaetomiaceae, Coniochaetaceae, Hel- group that has contained from seven to 14 families minthosphaeriaceae, LSU nrDNA, Nitschkiaceae, in recent years. The largest family is the Lasiosphaer- Sordariaceae iaceae, which has contained between 33 and 53 gen- era, depending on the chosen classi®cation. To de- termine the af®nities and taxonomic placement of INTRODUCTION the Lasiosphaeriaceae and other families in the Sor- The Sordariales is one of the most taxonomically di- dariales, taxa representing every family in the Sor- verse groups within the Class Sordariomycetes (Phy- dariales and most of the genera in the Lasiosphaeri- lum Ascomycota, Subphylum Pezizomycotina, ®de aceae were targeted for phylogenetic analysis using Eriksson et al 2001). -
Mitosporic Fungi) on Submerged Wood from Freshwater, Maharashtra, India
International Journal of Int. J. of Life Science, 2019; 7 (2):329-332 Life Science ISSN:2320-7817(p) | 2320-964X(o) International Peer Reviewed Open Access Refereed Journal Original Article Open Access Trichocladium aquaticum sp. nov. (mitosporic fungi) on submerged wood from freshwater, Maharashtra, India Patil SY1, Pawar NS2 and Borse BD3 1SSVP Sanstha’s L.K. Dr. P. R. Ghogrey Sci. college, Dhule, MS, India 2S.S.V.P. S.’s Arts, Comm. and Sci. college, Shindkheda, Dhule, MS, India 3N.S. S. Dhule’s U. P. Arts and Science college, Dahiwel, Dhule, MS, India Corresponding Author: Dr. N. S. Pawar,: [email protected] Manuscript details: ABSTRACT Received: 20.03.2019 A new species of Trichocladium, T. aquaticum, was collected from Accepted: 21.05.2019 northern parts of Western Ghats on submerged decaying woody debris Published: 25.06.2019 from freshwater streams and reservoirs in Maharashtra and is described. The new submerged-aquatic hyphomycetous fungus is differed from the Editor: Dr. Arvind Chavhan related species of the genus in size and characteristics of colony and conidia. Cite this article as: Patil SY, Pawar NS and Borse BD Key words: Freshwater, mitosporic fungi, submerged wood, taxonomy (2019) Trichocladium aquaticum sp. nov. (mitosporic fungi) on submerged wood from freshwater, INTRODUCTION Maharashtra, India, Int. J. of. Life Science, Volume 7(2): 329-332. The submerged-aquatic hyphomycetes were first addressed by Ingold (1975) represent a heterogenous assemblage of fungi growing on Copyright: © Author, This is an submerged decaying plant materials. Most of the species are found on open access article under the terms woody litter blocked in fast-flowing streams and reservoirs. -
AR TICLE Recommendations for Competing Sexual-Asexually Typified
IMA FUNGUS · 7(1): 131–153 (2016) doi:10.5598/imafungus.2016.07.01.08 Recommendations for competing sexual-asexually typified generic names in ARTICLE Sordariomycetes (except Diaporthales, Hypocreales, and Magnaporthales) Martina Réblová1, Andrew N. Miller2, Amy Y. Rossman3*, Keith A. Seifert4, Pedro W. Crous5, David L. Hawksworth6,7,8, Mohamed A. Abdel-Wahab9, Paul F. Cannon8, Dinushani A. Daranagama10, Z. Wilhelm De Beer11, Shi-Ke Huang10, Kevin D. Hyde10, Ruvvishika Jayawardena10, Walter Jaklitsch12,13, E. B. Gareth Jones14, Yu-Ming Ju15, Caroline Judith16, Sajeewa S. N. Maharachchikumbura17, Ka-Lai Pang18, Liliane E. Petrini19, Huzefa A. Raja20, Andrea I Romero21, Carol Shearer2, Indunil C. Senanayake10, Hermann Voglmayr13, Bevan S. Weir22, and Nalin N. Wijayawarden10 1Department of Taxonomy, Institute of Botany of the Academy of Sciences of the Czech Republic, Průhonice 252 43, Czech Republic 2Illinois Natural History Survey, University of Illinois, Champaign, Illinois 61820, USA 3Department of Botany and Plant Pathology, Oregon State University, Corvallis, Oregon 97331, USA; *corresponding author e-mail: amydianer@ yahoo.com 4Ottawa Research and Development Centre, Biodiversity (Mycology and Microbiology), Agriculture and Agri-Food Canada, 960 Carling Avenue, Ottawa, Ontario K1A 0C6 Canada 5CBS-KNAW Fungal Biodiversity Institute, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands 6Departamento de Biología Vegetal II, Facultad de Farmacia, Universidad Complutense, Plaza de Ramón y Cajal s/n, Madrid 28040, Spain 7Department of Life Sciences, -
Fungal Planet Description Sheets: 625–715
Persoonia 39, 2017: 270–467 ISSN (Online) 1878-9080 www.ingentaconnect.com/content/nhn/pimj RESEARCH ARTICLE https://doi.org/10.3767/persoonia.2017.39.11 Fungal Planet description sheets: 625–715 P.W. Crous1,2, M.J. Wingfield3, T.I. Burgess4, A.J. Carnegie5, G.E.St.J. Hardy 4, D. Smith6, B.A. Summerell7, J.F. Cano-Lira8, J. Guarro8, J. Houbraken1, L. Lombard1, M.P. Martín9, M. Sandoval-Denis1,69, A.V. Alexandrova10, C.W. Barnes11, I.G. Baseia12, J.D.P. Bezerra13, V. Guarnaccia1, T.W. May14, M. Hernández-Restrepo1, A.M. Stchigel 8, A.N. Miller15, M.E. Ordoñez16, V.P. Abreu17, T. Accioly18, C. Agnello19, A. Agustin Colmán17, C.C. Albuquerque20, D.S. Alfredo18, P. Alvarado21, G.R. Araújo-Magalhães22, S. Arauzo23, T. Atkinson24, A. Barili16, R.W. Barreto17, J.L. Bezerra25, T.S. Cabral 26, F. Camello Rodríguez27, R.H.S.F. Cruz18, P.P. Daniëls28, B.D.B. da Silva29, D.A.C. de Almeida 30, A.A. de Carvalho Júnior 31, C.A. Decock 32, L. Delgat 33, S. Denman 34, R.A. Dimitrov 35, J. Edwards 36, A.G. Fedosova 37, R.J. Ferreira 38, A.L. Firmino39, J.A. Flores16, D. García 8, J. Gené 8, A. Giraldo1, J.S. Góis 40, A.A.M. Gomes17, C.M. Gonçalves13, D.E. Gouliamova 41, M. Groenewald1, B.V. Guéorguiev 42, M. Guevara-Suarez 8, L.F.P. Gusmão 30, K. Hosaka 43, V. Hubka 44, S.M. Huhndorf 45, M. Jadan46, Ž. Jurjević47, B. Kraak1, V. Kučera 48, T.K.A.