Dissolution Behavior of Cellulose in the Binary Solvent of Polar Aprotic Solvent and TBAA
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Solvent Effects on the Thermodynamic Functions of Dissociation of Anilines and Phenols
University of Wollongong Research Online University of Wollongong Thesis Collection 1954-2016 University of Wollongong Thesis Collections 1982 Solvent effects on the thermodynamic functions of dissociation of anilines and phenols Barkat A. Khawaja University of Wollongong Follow this and additional works at: https://ro.uow.edu.au/theses University of Wollongong Copyright Warning You may print or download ONE copy of this document for the purpose of your own research or study. The University does not authorise you to copy, communicate or otherwise make available electronically to any other person any copyright material contained on this site. You are reminded of the following: This work is copyright. Apart from any use permitted under the Copyright Act 1968, no part of this work may be reproduced by any process, nor may any other exclusive right be exercised, without the permission of the author. Copyright owners are entitled to take legal action against persons who infringe their copyright. A reproduction of material that is protected by copyright may be a copyright infringement. A court may impose penalties and award damages in relation to offences and infringements relating to copyright material. Higher penalties may apply, and higher damages may be awarded, for offences and infringements involving the conversion of material into digital or electronic form. Unless otherwise indicated, the views expressed in this thesis are those of the author and do not necessarily represent the views of the University of Wollongong. Recommended Citation Khawaja, Barkat A., Solvent effects on the thermodynamic functions of dissociation of anilines and phenols, Master of Science thesis, Department of Chemistry, University of Wollongong, 1982. -
Solvatochromism, Solvents, Polarity, Pomiferin, Absorption
Physical Chemistry 2016, 6(2): 33-38 DOI: 10.5923/j.pc.20160602.01 Study in the Solvent Polarity Effects on Solvatochromic Behaviour of Pomiferin Erol Tasal1, Ebru Gungor2,*, Tayyar Gungor2 1Physics Department, Eskisehir Osmangazi University, Eskisehir, Turkey 2Energy Systems Engineering Department, Mehmet Akif Ersoy University, Burdur, Turkey Abstract Solvent polarity is very important considering the coulombic and dispersive interactions between the charge distribution in the solubility and the polarizability of the solvent. Therefore, the solvatochromic properties of pomiferin molecule in solvents of different polarities has been investigated. So, the electronic absorption of pomiferin molecule at room temperature was analyzed by using some physical parameters such as refractive index, dielectric constant, Kamlet–Taft parameters α (hydrogen bond donating ability) and β (hydrogen bond accepting ability). The absorption spectra were decomposed by using multiple peak analysis. It was obtained that some solvents indicated a good linearity for hydrogen-bond acceptor basicity parameter, refractive index and dielectric constant with respect to wavenumber. This showed that the hydrogen-bond acceptor basicity parameter is the most important parameter for both dissociation and complex formation reactions, and the hydrogen bonding acceptor ability and the induction-dispersive forces of solvent molecules have caused the bathochromic shift in absorption maxima of pomiferin molecule. Keywords Solvatochromism, Solvents, Polarity, Pomiferin, Absorption increased collagen expression in ex vivo hair follicles [23]. 1. Introduction Ultraviolet–visible (UV-Vis) spectroscopy is proven as a convenient technique to study electronic absorption Pomiferin molecule is known to exhibit solvatochromic properties of the molecule and to understand the solvent behavior and find various pharmaceutical applications. -
Solvation Structure of Ions in Water
International Journal of Thermophysics, Vol. 28, No. 2, April 2007 (© 2007) DOI: 10.1007/s10765-007-0154-6 Solvation Structure of Ions in Water Raymond D. Mountain1 Molecular dynamics simulations of ions in water are reported for solutions of varying solute concentration at ambient conditions for six cations and four anions in 10 solutes. The solutes were selected to show trends in properties as the size and charge density of the ions change. The emphasis is on how the structure of water is modified by the presence of the ions and how many water molecules are present in the first solvation shell of the ions. KEY WORDS: anion; cation; molecular dynamics; potential functions; solva- tion; water. 1. INTRODUCTION The behavior of aqueous solutions of salts is a topic of continuing interest [1–3]. In this note we examine how the structure of water,as reflected in the oxy- gen–oxygen pair function, is modified as the concentration of ions increases. The method of generating the pair functions is molecular dynamics using the SPC/E model for water [4] and various models for ion–water interactions taken from the literature. The solutes are LiCl, NaCl, KCl, RbCl, NaF, CaCl2, CaSO4,Na2SO4, NaNO3, and guanidinium chloride (GdmCl) [C(NH2)3Cl]. This work is an extension of earlier work [5] to a larger set of ions. The water molecules and ions interact through site–site pair interac- tions consisting of Lennard–Jones potentials and Coulomb interactions so that the interaction between a pair of sites labeled i, j and separated by an interatomic distance r is 12 6 φij (r) = 4ij (σij /r) − (σij /r) + qiqj /r (1) where qi is the charge on site i. -
Aprotic Solvents
1 Prioritised substance group: Aprotic solvents Responsible author Normunds Kadikis Email [email protected] Short Name of Institution VIAA, LV Phone Co-authors 1.1 Background Information In chemistry the solvents are qualitatively grouped into non-polar, polar aprotic, and polar protic solvents. A protic solvent is a solvent that has a hydrogen atom bound to oxygen (as in a hydroxyl group) or nitrogen (as in an amine group). In general terms, any solvent that contains a labile H+ is called a protic solvent. The molecules of such solvents readily donate protons (H+) to reagents. On the contrary, aprotic solvents cannot donate hydrogen as they do not have O-H or N-H bonds. The "a" means "without", and "protic" refers to protons or hydrogen atoms. Examples of non-polar solvents are benzene, toluene, chloroform, dichloromethane, etc. Examples of polar protic solvents are water, most alcohols, formic acid, ammonia, etc, In their turn, some common polar aprotic solvents are acetone, acetonitrile, dimethylformamide, dimethylsulfoxide, etc. There are numerous aprotic solvents, and they are widely used in different applications - as pH regulators and in water treatment products, anti-freeze products, coating products, lubricants and greases, adhesives and sealants, air care products (scented candles, air freshening sprays, electric and non-electric fragrance diffusers), non-metal-surface treatment products, inks and toners, leather treatment products, polishes and waxes, washing and cleaning products. They are also used as laboratory chemicals in scientific research, in agriculture, forestry and fishing as well as in the formulation of mixtures and/or re-packaging. During the second prioritisation process within HBM4EU the ECHA and Germany proposed to include in the second list of priority substances four aprotic solvents that have a similar toxicological profile and a harmonised classification for reproductive toxicity: ▸ 1-methyl-2-pyrrolidone (NMP), ▸ 1-ethylpyrrolidin-2-one (NEP), ▸ N,N-dimethylacetamide (DMAC), ▸ N,N-dimethylformamide (DMF). -
Affinity of Small-Molecule Solutes to Hydrophobic, Hydrophilic, and Chemically Patterned Interfaces in Aqueous Solution
Affinity of small-molecule solutes to hydrophobic, hydrophilic, and chemically patterned interfaces in aqueous solution Jacob I. Monroea, Sally Jiaoa, R. Justin Davisb, Dennis Robinson Browna, Lynn E. Katzb, and M. Scott Shella,1 aDepartment of Chemical Engineering, University of California, Santa Barbara, CA 93106; and bDepartment of Civil, Architectural and Environmental Engineering, University of Texas at Austin, Austin, TX 78712 Edited by Peter J. Rossky, Rice University, Houston, TX, and approved November 17, 2020 (received for review September 30, 2020) Performance of membranes for water purification is highly influ- However, a molecular understanding that links membrane enced by the interactions of solvated species with membrane surface chemistry to solute affinity and hence membrane func- surfaces, including surface adsorption of solutes upon fouling. tional properties remains incomplete, due in part to the complex Current efforts toward fouling-resistant membranes often pursue interplay among specific interactions (e.g., hydrogen bonds, surface hydrophilization, frequently motivated by macroscopic electrostatics, dispersion) and molecular morphology (e.g., sur- measures of hydrophilicity, because hydrophobicity is thought to face and polymer configurations) that are difficult to disentangle increase solute–surface affinity. While this heuristic has driven di- (11–14). Chemically heterogeneous surfaces are even less un- verse membrane functionalization strategies, here we build on derstood but can affect fouling in complex ways. -
Selective Depolymerization of Cellulose to Solubilized Carbohydrates in Aprotic Solvent Systems Introduction Results and Discussion Results and Discussion
4th International Conference on Thermochemical Biomass Conversion Science Bioeconomy Institute 2-5th November, 2015 Westin Chicago River North Arpa Ghosh, Robert C. Brown, Xianglan Bai Selective depolymerization of cellulose to solubilized carbohydrates in aprotic solvent systems Introduction Results and Discussion Results and Discussion Cellulose is the primary source of fermentable carbohydrates in biomass but it is inherently recalcitrant to Product Distribution of Cellulose Solvolysis in Non-catalytic Aprotic Solvents at Supercritical State: chemical and biological treatments. Effect of Reaction Conditions on LG Yields in 1,4-dioxane: (Published, [1]) Conventional method of enzymatic hydrolysis suffers from slow conversion rates, limited by inhibitors, involves costly enzyme production step. Temperature 350oC and 20 mg Cellulose LG Yields Correlated with Solvent Polarity Effect of Acid Concentration Effect of Mass loading of cellulose Effect of Temperature 40 50 70 60 Reaction time 8-16 min 0.25 mM 1 mg o 35 GVL 375 C Biomass/Cellulose Solid residue 60 50 100 Acetonitrile 40 10 mg 350oC 30 50 300oC 90 0.1 mM 40 25 MIBK Supercritical Polar Aprotic Solvent 80 Furfural THF 30 40 Acetone 20 mg 30 70 20 2 mM yield (%) Ethyl acetate 30 60 20 50 mg o 5-HMF 15 20 250 C 1,4-dioxane LGyield (%) LG LGyield (%) Solubilized Carbohydrates and 50 20 LGyield (%) 10 y = 0.9948x + 13.31 10 No acid 10 Minor Secondary Dehydration Products 40 R² = 0.867 10 Solubilized 5 30 0 0 0 Carbon yield (%) carbohydrates of DP >1 Hot and pressurized polar aprotic solvents can rapidly decompose cellulose to produce significantly high 20 0 0 5 10 15 0 2 4 0 5 10 10 AGF 0 5 10 15 20 25 Time of reaction (min) Time of reaction (min) Time of reaction (min) yields of solubilized carbohydrates (anhydrosugar levoglucosan is primary product). -
The Cloud Point Composition and Flory-Huggins Interaction Parameters of Polyethylene Glycol and Sodium Lignin Sulfonate in Water - Ethanol Mixture
AN ABSTRACT OF THE THESIS OF Luh, Song - Ping for the degree of Master of Science in Chemical Engineering presented on July 22, 1987 Title: The Cloud Point Composition and Flory - Huggins Interaction Parameters of Polyethylene Glycol and Sodium Lignin Sulfonate in Water - Ethanol Mixtures Redacted for Privacy Abstract Approved: Willi J. Frederick/Jr. In designing a solubility based separation process for solvent recovery of an organosolv pulping process, the phase behavior of polymeric lignin molecules in alcohol - water mixed solvent should be known. In this study, sodium lignin sulfonates (NaLS) samples were fractionated into three different molecular weight fractions using a partial dissolution method. The cloud point compositions of each of the three fractions were determined by a cloud point titration method. The experimental data were correlated using the three component Flory - Huggins equation of the Gibbs free energy change of mixing. The binary interaction parameter between water and that between ethanol and NaLSwere found to be a weak function of the NaLS volume fraction, while that between water and ethanol was strongly depend on the solvent composition. The Cloud Point Composition and Flory - Huggins Interaction Parameters of Polyethylene Glycol and Sodium Lignin Sulfonate in Water - Ethanol Mixtures by Luh, Song - Ping A THESIS submitted to Oregon State University in partial fulfillment of the requirements for the degree of Master of Science Completed July 22, 1987 Commencement June 1988 APPROVED: Redacted for Privacy Associate P fessor of Chemi401 Engineering in charge of major Redacted for Privacy Head of Department of dlemical Engineering Redacted for Privacy Dean of Gradu School (I Date thesis is presented July 22, 1987 Typed by Luh, Song - Ping for Luh, Song - Ping TABLE OF CONTENTS Page INTRODUCTION 1 LITERATURE REVIEW 3 1. -
Role of Solvation in Drug Design As Revealed by the Statistical Mechanics Integral Equation Theory of Liquids Norio Yoshida*
Review Cite This: J. Chem. Inf. Model. 2017, 57, 2646-2656 pubs.acs.org/jcim Role of Solvation in Drug Design as Revealed by the Statistical Mechanics Integral Equation Theory of Liquids Norio Yoshida* Department of Chemistry, Graduate School of Science, Kyushu University, 744 Motooka, Nishi-ku, Fukuoka 819-0395 Japan ABSTRACT: Recent developments and applications in theoretical methods focusing on drug design and particularly on the solvent effect in molecular recognition based on the three-dimensional reference interaction site model (3D-RISM) theory are reviewed. Molecular recognition, a fundamental molecular process in living systems, is known to be the functional mechanism of most drugs. Solvents play an essential role in molecular recognition processes as well as in ligand−protein interactions. The 3D-RISM theory is derived from the fundamental statistical mechanics theory, which reproduces all solvation thermodynamics naturally and has some advantages over conventional solvation methods, such as molecular simulation and the continuum model. Here, we review the basics of the 3D-RISM theory and methods of molecular recognition in its applications toward drug design. KEYWORDS: Drug design, Molecular recognition, Solvation, 3D-RISM ■ INTRODUCTION ΔGG=Δconf +Δ G int +Δ G solv (2) Molecular recognition is one of the most important where ΔGconf, ΔGint, and ΔGsolv denote the changes in the fundamental processes in biological systems and is known to 1 conformational energy, the interaction energy between ligand be the functional mechanism of most drugs. This is defined as a molecular process in which a ligand molecule is bound at a and protein, and the solvation free energy, respectively. -
Calculating the Partition Coefficients of Organic Solvents in Octanol/Water and Octanol/Air
Article Cite This: J. Chem. Inf. Model. XXXX, XXX, XXX−XXX pubs.acs.org/jcim Calculating the Partition Coefficients of Organic Solvents in Octanol/ Water and Octanol/Air † ‡ § ∥ Miroslava A. Nedyalkova,*, Sergio Madurga, Marek Tobiszewski, and Vasil Simeonov † Inorganic Chemistry Department, Faculty of Chemistry and Pharmacy, University of Sofia, Sofia 1164, Bulgaria ‡ Departament de Ciencià de Materials i Química Física and Institut de Química Teoricà i Computacional (IQTCUB), Universitat de Barcelona, 08028 Barcelona, Catalonia, Spain § Department of Analytical Chemistry, Faculty of Chemistry, Gdansḱ University of Technology (GUT), 80-233 Gdansk,́ Poland ∥ Analytical Chemistry Department, Faculty of Chemistry and Pharmacy, University of Sofia, Sofia 1164, Bulgaria *S Supporting Information ABSTRACT: Partition coefficients define how a solute is distributed between two immiscible phases at equilibrium. The experimental estimation of partition coefficients in a complex system can be an expensive, difficult, and time-consuming process. Here a computa- tional strategy to predict the distributions of a set of solutes in two relevant phase equilibria is presented. The octanol/water and octanol/air partition coefficients are predicted for a group of polar solvents using density functional theory (DFT) calculations in combination with a solvation model based on density (SMD) and are in excellent agreement with experimental data. Thus, the use of quantum-chemical calculations to predict partition coefficients from free energies should be a valuable alternative for unknown solvents. The obtained results indicate that the SMD continuum model in conjunction with any of the three DFT functionals (B3LYP, M06-2X, and M11) agrees with the observed experimental values. The highest correlation to experimental data for the octanol/water partition coefficients was reached by the M11 functional; for the octanol/air partition coefficient, the M06-2X functional yielded the best performance. -
Calculation of the Water-Octanol Partition Coefficient of Cholesterol for SPC, TIP3P, and TIP4P Water
Calculation of the water-octanol partition coefficient of cholesterol for SPC, TIP3P, and TIP4P water Cite as: J. Chem. Phys. 149, 224501 (2018); https://doi.org/10.1063/1.5054056 Submitted: 29 August 2018 . Accepted: 13 November 2018 . Published Online: 11 December 2018 Jorge R. Espinosa, Charlie R. Wand, Carlos Vega , Eduardo Sanz, and Daan Frenkel COLLECTIONS This paper was selected as an Editor’s Pick ARTICLES YOU MAY BE INTERESTED IN Common microscopic structural origin for water’s thermodynamic and dynamic anomalies The Journal of Chemical Physics 149, 224502 (2018); https://doi.org/10.1063/1.5055908 Improved general-purpose five-point model for water: TIP5P/2018 The Journal of Chemical Physics 149, 224507 (2018); https://doi.org/10.1063/1.5070137 Comparison of simple potential functions for simulating liquid water The Journal of Chemical Physics 79, 926 (1983); https://doi.org/10.1063/1.445869 J. Chem. Phys. 149, 224501 (2018); https://doi.org/10.1063/1.5054056 149, 224501 © 2018 Author(s). THE JOURNAL OF CHEMICAL PHYSICS 149, 224501 (2018) Calculation of the water-octanol partition coefficient of cholesterol for SPC, TIP3P, and TIP4P water Jorge R. Espinosa,1 Charlie R. Wand,2,3 Carlos Vega,1 Eduardo Sanz,1 and Daan Frenkel2 1Departamento de Quimica Fisica, Facultad de Ciencias Quimicas, Universidad Complutense de Madrid, 28040 Madrid, Spain 2Department of Chemistry, University of Cambridge, Lensfield Road, Cambridge CB2 1EW, United Kingdom 3School of Chemical Engineering and Analytical Science, University of Manchester, Manchester M13 9PL, United Kingdom (Received 29 August 2018; accepted 13 November 2018; published online 11 December 2018) We present a numerical study of the relative solubility of cholesterol in octanol and water. -
From Hydrophobic to Hydrophilic Behaviour: a Simulation Study of Solvation Entropy and Free Energy of Simple Solutes R
From hydrophobic to hydrophilic behaviour: A simulation study of solvation entropy and free energy of simple solutes R. M. Lynden-Bell Atomistic Simulation Group and Irish Centre for Colloid Science, School of Mathematics and Physics, The Queen’s University, Belfast BT7 1NN, United Kingdom J. C. Rasaiah Department of Chemistry, University of Maine, Orono, Maine 04469 ~Received 14 April 1997; accepted 30 April 1997! We describe atomistic simulations of the free energy and entropy of hydration of ions in aqueous solution at 25 °C using a simple point charge model ~SPC/E! for water and charged spherical Lennard-Jones solutes. We use a novel method with an extended Lagrangian or Hamiltonian in which the charge and the size of the ions are considered as dynamical variables. This enables us to determine thermodynamic properties as continuous functions of solute size and charge and to move smoothly from hydrophilic to hydrophobic solvation conditions. On passing between these extremes, the entropy of solvation goes through maxima. For example it shows a double maximum as a function of charge at constant size and a single maximum as a function of size at constant ~non-zero! charge. These maxima correspond to extremes of structure-breaking and are associated with the disappearance of the second solvation shell in the radial distribution function; no anomalies are seen in the first shell. We also present direct evidence of the asymmetry in the free energy, enthalpy and entropy of hydration of ions on charge inversion arising from the asymmetry in the charge distribution in a water molecule. Our calculation only includes local contributions to the thermodynamic functions, but once finite size corrections are applied, the results are in reasonable agreement with experiment. -
Calculation of the Free Energy of Solvation from Molecular Dynamics Simulations*
Pure Appl. Chem., Vol. 76, No. 1, pp. 231–240, 2004. © 2004 IUPAC Calculation of the free energy of solvation from molecular dynamics simulations* Paulo F. B. Gonçalves and Hubert Stassen‡ Grupo de Química Teórica, Instituto de Química, Universidade Federal do Rio Grande do Sul, 91540-000 Porto Alegre-RS, Brazil Abstract: Molecular dynamics simulation has been employed in the computation of the free energy of solvation for a large number of solute molecules with different chemical function- alities in the solvents water, acetonitril, dimethyl sulfoxide, tetrahydrofuran, and carbon disulfide. The free solvation energy has been separated into three contributions: the work necessary to create a cavity around the solute in the solvent, the electrostatic contribution, and the free energy containing the short-range interactions between solute and solvent mol- ecules. The cavitational contribution was computed from the Claverie–Pierotti model applied to excluded volumes obtained from nearest-neighbor solute–solvent configurations treating the solvent molecules as spherical. The electrostatic term was calculated from a dielectric continuum approach with explicitly incorporating the solvent’s partial charges. The short- range contribution to the free solvation energy was obtained from the force field employed in the simulations. For solutions with available experimental data for the free energy of sol- vation, we found a satisfactory agreement of the computed free solvation energies and the ex- perimental data set. INTRODUCTION ∆ The free energy of solvation Gsolv represents a very important property for the thermodynamical de- scription of a solution with impact in the chemical, biological, and pharmaceutical sciences. From the ∆ theoretical point of view, several approaches have been developed to predict Gsolv.