Early Guenon from the Late Miocene Baynunah Formation, Abu Dhabi, with Implications for Cercopithecoid Biogeography and Evolution
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The Taxonomy of Primates in the Laboratory Context
P0800261_01 7/14/05 8:00 AM Page 3 C HAPTER 1 The Taxonomy of Primates T HE T in the Laboratory Context AXONOMY OF P Colin Groves RIMATES School of Archaeology and Anthropology, Australian National University, Canberra, ACT 0200, Australia 3 What are species? D Taxonomy: EFINITION OF THE The biological Organizing nature species concept Taxonomy means classifying organisms. It is nowadays commonly used as a synonym for systematics, though Disagreement as to what precisely constitutes a species P strictly speaking systematics is a much broader sphere is to be expected, given that the concept serves so many RIMATE of interest – interrelationships, and biodiversity. At the functions (Vane-Wright, 1992). We may be interested basis of taxonomy lies that much-debated concept, the in classification as such, or in the evolutionary implica- species. tions of species; in the theory of species, or in simply M ODEL Because there is so much misunderstanding about how to recognize them; or in their reproductive, phys- what a species is, it is necessary to give some space to iological, or husbandry status. discussion of the concept. The importance of what we Most non-specialists probably have some vague mean by the word “species” goes way beyond taxonomy idea that species are defined by not interbreeding with as such: it affects such diverse fields as genetics, biogeog- each other; usually, that hybrids between different species raphy, population biology, ecology, ethology, and bio- are sterile, or that they are incapable of hybridizing at diversity; in an era in which threats to the natural all. Such an impression ultimately derives from the def- world and its biodiversity are accelerating, it affects inition by Mayr (1940), whereby species are “groups of conservation strategies (Rojas, 1992). -
Arxiv:2101.10390V1 [Cs.LG] 25 Jan 2021 Terms of Quality, Increasing the Comparability and Reproducibil- Conservation and Education Initiatives
Introducing a Central African Primate Vocalisation Dataset for Automated Species Classification Joeri A. Zwerts1, Jelle Treep2, Casper S. Kaandorp2, Floor Meewis1, Amparo C. Koot1, Heysem Kaya3 1 Department of Biology, Utrecht University, Utrecht, The Netherlands 2 Information and Technology Services, Utrecht University, Utrecht, The Netherlands 3 Department of Information and Computing Sciences, Utrecht University, Utrecht, The Netherlands [email protected], [email protected] Abstract classifier capable of detecting species in the wild. This may also provide insights into whether this approach, of using sanctuary Automated classification of animal vocalisations is a poten- recordings, can be used to train classifiers for other species as tially powerful wildlife monitoring tool. Training robust clas- well, to aid in the development of cost-effective monitoring to sifiers requires sizable annotated datasets, which are not eas- meet modern conservation challenges. ily recorded in the wild. To circumvent this problem, we In this paper, we present the dataset, the semi-automatic an- recorded four primate species under semi-natural conditions in notation process that we used to speed up the manual annotation a wildlife sanctuary in Cameroon with the objective to train a process, and a benchmark species classification system. classifier capable of detecting species in the wild. Here, we introduce the collected dataset, describe our approach and ini- tial results of classifier development. To increase the efficiency 1.1. Related Work of the annotation process, we condensed the recordings with Multiple studies have applied automatic acoustic monitoring for an energy/change based automatic vocalisation detection. Seg- a variety of taxa including cetaceans [4], birds [5], bats [6], menting the annotated chunks into training, validation and test insects [7], amphibians [8], and forest elephants [9]. -
Patterns of Cranial Shape Variation in the Papionini (Primates
Michelle Singleton Patterns of cranial shape variation in the Department of Anatomy, Papionini (Primates: Cercopithecinae) Midwestern University, 555 31st Street, Downers Grove, Traditional classifications of the Old World monkey tribe Papionini Illinois 60515, U.S.A. (Primates: Cercopithecinae) recognized the mangabey genera E-mail: Cercocebus and Lophocebus as sister taxa. However, molecular studies [email protected] have consistently found the mangabeys to be diphyletic, with Cercocebus and Mandrillus forming a clade to the exclusion of all other Received 10 January 2001 papionins. Recent studies have identified cranial and postcranial Revision received features which distinguish the Cercocebus–Mandrillus clade, however 26 October 2001 and the detailed similarities in cranial shape between the mangabey accepted 12 December 2001 genera are more difficult to reconcile with the molecular evidence. ff Keywords: Papionini, Given the large size di erential between members of the papionin molecular clades, it has frequently been suggested that allometric mangabey diphyly, cranial ff homoplasy, allometry, e ects account for homoplasy in papionin cranial form. A combina- geometric morphometrics. tion of geometric morphometric, bivariate, and multivariate methods was used to evaluate the hypothesis that allometric scaling contributes to craniofacial similarities between like-sized papionin taxa. Patterns of allometric and size-independent cranial shape variation were subsequently described and related to known papionin phylogenetic relationships and patterns of development. Results confirm that allometric scaling of craniofacial shape characterized by positive facial allometry and negative neurocranial allometry is present across adult papionins. Pairwise comparisons of regression lines among genera revealed considerable homogeneity of scaling within the Papionini, however statistically significant differ- ences in regression lines also were noted. -
World's Most Endangered Primates
Primates in Peril The World’s 25 Most Endangered Primates 2016–2018 Edited by Christoph Schwitzer, Russell A. Mittermeier, Anthony B. Rylands, Federica Chiozza, Elizabeth A. Williamson, Elizabeth J. Macfie, Janette Wallis and Alison Cotton Illustrations by Stephen D. Nash IUCN SSC Primate Specialist Group (PSG) International Primatological Society (IPS) Conservation International (CI) Bristol Zoological Society (BZS) Published by: IUCN SSC Primate Specialist Group (PSG), International Primatological Society (IPS), Conservation International (CI), Bristol Zoological Society (BZS) Copyright: ©2017 Conservation International All rights reserved. No part of this report may be reproduced in any form or by any means without permission in writing from the publisher. Inquiries to the publisher should be directed to the following address: Russell A. Mittermeier, Chair, IUCN SSC Primate Specialist Group, Conservation International, 2011 Crystal Drive, Suite 500, Arlington, VA 22202, USA. Citation (report): Schwitzer, C., Mittermeier, R.A., Rylands, A.B., Chiozza, F., Williamson, E.A., Macfie, E.J., Wallis, J. and Cotton, A. (eds.). 2017. Primates in Peril: The World’s 25 Most Endangered Primates 2016–2018. IUCN SSC Primate Specialist Group (PSG), International Primatological Society (IPS), Conservation International (CI), and Bristol Zoological Society, Arlington, VA. 99 pp. Citation (species): Salmona, J., Patel, E.R., Chikhi, L. and Banks, M.A. 2017. Propithecus perrieri (Lavauden, 1931). In: C. Schwitzer, R.A. Mittermeier, A.B. Rylands, F. Chiozza, E.A. Williamson, E.J. Macfie, J. Wallis and A. Cotton (eds.), Primates in Peril: The World’s 25 Most Endangered Primates 2016–2018, pp. 40-43. IUCN SSC Primate Specialist Group (PSG), International Primatological Society (IPS), Conservation International (CI), and Bristol Zoological Society, Arlington, VA. -
Mandrillus Leucophaeus Poensis)
Ecology and Behavior of the Bioko Island Drill (Mandrillus leucophaeus poensis) A Thesis Submitted to the Faculty of Drexel University by Jacob Robert Owens in partial fulfillment of the requirements for the degree of Doctor of Philosophy December 2013 i © Copyright 2013 Jacob Robert Owens. All Rights Reserved ii Dedications To my wife, Jen. iii Acknowledgments The research presented herein was made possible by the financial support provided by Primate Conservation Inc., ExxonMobil Foundation, Mobil Equatorial Guinea, Inc., Margo Marsh Biodiversity Fund, and the Los Angeles Zoo. I would also like to express my gratitude to Dr. Teck-Kah Lim and the Drexel University Office of Graduate Studies for the Dissertation Fellowship and the invaluable time it provided me during the writing process. I thank the Government of Equatorial Guinea, the Ministry of Fisheries and the Environment, Ministry of Information, Press, and Radio, and the Ministry of Culture and Tourism for the opportunity to work and live in one of the most beautiful and unique places in the world. I am grateful to the faculty and staff of the National University of Equatorial Guinea who helped me navigate the geographic and bureaucratic landscape of Bioko Island. I would especially like to thank Jose Manuel Esara Echube, Claudio Posa Bohome, Maximilliano Fero Meñe, Eusebio Ondo Nguema, and Mariano Obama Bibang. The journey to my Ph.D. has been considerably more taxing than I expected, and I would not have been able to complete it without the assistance of an expansive list of people. I would like to thank all of you who have helped me through this process, many of whom I lack the space to do so specifically here. -
The Consequences of Habitat Loss and Fragmentation on the Distribution, Population Size, Habitat Preferences, Feeding and Rangin
The consequences of habitat loss and fragmentation on the distribution, population size, habitat preferences, feeding and ranging Ecology of grivet monkey (Cercopithecus aethiopes aethiops) on the human dominated habitats of north Shoa, Amhara, Ethiopia: A Study of human-grivet monkey conflict 1 Table of contents Page 1. Introduction 1 1.1. Background And Justifications 3 1.2. Statement Of The Problem 6 1.3. Objectives 7 1.3.1. General Objective 7 1.3.2. Specific Objectives 8 1.4. Research Hypotheses Under Investigation 8 2. Description Of The Study Area 8 3. Methodology 11 3.1. Habitat Stratification, Vegetation Mapping And Land Use Cover 11 Change 3.2. Distribution Pattern And Population Estimate Of Grivet Monkey 11 3.3. Behavioral Data 12 3.4. Human Grivet Monkey Conflict 15 3.5. Habitat Loss And Fragmentation 15 4. Expected Output 16 5. Challenges Of The Project 16 6. References 17 i 1. Introduction World mammals status analysis on global scale shows that primates are the most threatened mammals (Schipper et al., 2008) making them indicators for investigating vulnerability to threats. Habitat loss and destruction are often considered to be the most serious threat to many tropical primate populations because of agricultural expansion, livestock grazing, logging, and human settlement (Cowlishaw and Dunbar, 2000). Deforestation and forest fragmentation have marched together with the expansion of agricultural frontiers, resulting in both habitat loss and subdivision of the remaining habitat (Michalski and Peres, 2005). This forest degradation results in reduction in size or fragmentation of the original forest habitat (Fahrig, 2003). Habitat fragmentation is often defined as a process during which “a large expanse of habitat is transformed into a number of smaller patches of smaller total area, isolated from each other by a matrix of habitats unlike the original”. -
Primate Evolution and Human Origins (Eds: W
11/9/11 (1) Evolution of the Primate Brain To appear in Handbook of Palaeoanthropology, Vol. 2: Primate Evolution and Human Origins (Eds: W. Henke, H. Rothe & I. Tattersall), Springer-Verlag, in press. (1) Evolution of the Primate Brain Dean Falk Department of Anthropology Florida State University Tallahassee, FL 32306-7772 [email protected] (12.) 1 Introduction The mammalian order of primates is known for a variety of species that are lively, curious, social, and intelligent. Nonhuman primates are of special interest to people, not only because they are appealing and entertaining to watch, but also because certain species (e.g., of macaques or baboons) are genetically close to humans, which makes them excellent animal models for medical research. As curious primates ourselves, we wonder about our evolutionary origins. One way to address this topic is to study and compare species from living primates that are thought to approximate broad stages (or grades) that occurred during some 65 million years of primate evolution. Thus, one may compare particular anatomical structures or behaviors across appropriate representatives from the series prosimian-> monkey-> ape -> human. When possible, such a comparative method should be supplemented with the direct method of studying fossil primates, which adds elements of specificity and time to the picture. Within this broader context, we are also interested in the more specific question of how humans came to be, not only the largest-brained primate, but also the most intelligent species on Earth. In order to address this question, one must study primate brain evolution. From our general understanding of primate evolution, we know that certain major adaptations occurred in some groups and that these changed and sculpted evolving brains during many millions of years. -
The Presence of a Large Cercopithecine (Cf. Theropithecus Sp.) in the ‘Ubeidiya Formation (Early Pleistocene, Israel)
ARTICLE IN PRESS Journal of Human Evolution xxx (2009) 1–11 Contents lists available at ScienceDirect Journal of Human Evolution journal homepage: www.elsevier.com/locate/jhevol The presence of a large cercopithecine (cf. Theropithecus sp.) in the ‘Ubeidiya formation (Early Pleistocene, Israel) Miriam Belmaker Department of Anthropology, Harvard University, 11 Divinity Ave, Cambridge MA 02138, USA article info abstract Article history: This study presents the discovery of a right cercopithecine calcaneus from the site of ‘Ubeidiya, Israel, Received 25 June 2008 dated to ca. 1.6 Ma. The fossil is described and statistically compared to bones of modern and fossil Accepted 20 August 2009 cercopithecids. The specimen can be attributed to a large-bodied cercopithecine and represents a new primate taxon previously unidentified in the Early Pleistocene of the Southern Levant. Among extant Keywords: genera, it is most clearly similar to calcanei of Theropithecus. However, it could also represent Para- Primate biogeography dolichopithecus, but this alternative is unlikely due to the morphological uniqueness of the latter taxon. Out of Africa I The finding of an African taxon in the Levant suggests a circum-Mediterranean dispersal route for the Cercopithecidae taxon out of Africa, and emphasizes the importance of the Levantine corridor as a biogeographic dispersal route between Africa and Eurasia during the Early Pleistocene. Evidence for the biogeography of large-bodied primates is essential for the understanding of the dispersal routes of ‘‘Out of Africa I’’ taxa and can help elucidate Homo dispersal patterns in the Early Pleistocene. Ó 2009 Elsevier Ltd. All rights reserved. Introduction Pleistocene contexts (Delson, 1980). -
Fossil Primates
AccessScience from McGraw-Hill Education Page 1 of 16 www.accessscience.com Fossil primates Contributed by: Eric Delson Publication year: 2014 Extinct members of the order of mammals to which humans belong. All current classifications divide the living primates into two major groups (suborders): the Strepsirhini or “lower” primates (lemurs, lorises, and bushbabies) and the Haplorhini or “higher” primates [tarsiers and anthropoids (New and Old World monkeys, greater and lesser apes, and humans)]. Some fossil groups (omomyiforms and adapiforms) can be placed with or near these two extant groupings; however, there is contention whether the Plesiadapiformes represent the earliest relatives of primates and are best placed within the order (as here) or outside it. See also: FOSSIL; MAMMALIA; PHYLOGENY; PHYSICAL ANTHROPOLOGY; PRIMATES. Vast evidence suggests that the order Primates is a monophyletic group, that is, the primates have a common genetic origin. Although several peculiarities of the primate bauplan (body plan) appear to be inherited from an inferred common ancestor, it seems that the order as a whole is characterized by showing a variety of parallel adaptations in different groups to a predominantly arboreal lifestyle, including anatomical and behavioral complexes related to improved grasping and manipulative capacities, a variety of locomotor styles, and enlargement of the higher centers of the brain. Among the extant primates, the lower primates more closely resemble forms that evolved relatively early in the history of the order, whereas the higher primates represent a group that evolved more recently (Fig. 1). A classification of the primates, as accepted here, appears above. Early primates The earliest primates are placed in their own semiorder, Plesiadapiformes (as contrasted with the semiorder Euprimates for all living forms), because they have no direct evolutionary links with, and bear few adaptive resemblances to, any group of living primates. -
Title Morphology of the Humerus and Femur in African Mangabeys And
Morphology of the Humerus and Femur in African Mangabeys Title and Guenons: Functional Adaptation and Implications for the Evolution of Positional Behavior Author(s) NAKATSUKASA, Masato African study monographs. Supplementary issue (1994), 21: 1- Citation 61 Issue Date 1994-08 URL https://doi.org/10.14989/68371 Right Type Journal Article Textversion publisher Kyoto University African Study Monographs, Suppl. 21: 1-61, August 1994 MORPHOLOGY OF THE HUMERUS AND FEMUR IN AFRICAN MANGABEYS AND GUENONS: FUNCTIONAL ADAPTATION AND IMPLICATIONS FOR THE EVOLUTION OF POSITIONAL BEHAVIOR Masato NAKATSUKASA Department ofAnatomy and Biology, Osaka Medical College ABSTRACT The morphology of the humerus and femur was examined in three mangabey species (Cercocebus albigena, Cercocebus torquatus, Cercocebus galeritus) and three guenon species (Cercopithecus mitis, Cercopithecus mona, Cercopithecus aethiops). Cercocebus albigena, Cercopithecus mitis and Cercopithecus mona are strictly arboreal whereas Cercocebus torquatus, Cercocebus galeritus and Cercopithecus aethiops are more frequently utilize terrestrial substrates. Morphological differences, which presumably reflect different positional behaviors, were found within both Cercocebus and Cercopithecus genera. The arboreal Cercocebus albigena differs from the more terrestrial Cercocebus torquatus and Cercocebus galeritus in having more mobile joints and more gracile bones. In Cercocebus torquatus and Cercocebus galeritus, joint movements tends to be restricted to the parasagittal plane emphasizing the economy of parasagittal excursion of the limbs. Similar tendencies were observed between the arboreal Cercopithecus mitis and Cercopithecus mona and the semi-terrestrial Cercopithecus aethiops. However, the morphological distinctions, associated to arboreality vs. terrestriality, are not identical between Cercocebus and Cercopithecus. Semi-terrestrial mangabeys exhibit stronger adaptations for terrestriality by comparison with the semi-terrestrial guenon. -
The Genome of the Vervet (Chlorocebus Aethiops Sabaeus)
Downloaded from genome.cshlp.org on October 1, 2021 - Published by Cold Spring Harbor Laboratory Press Resource The genome of the vervet (Chlorocebus aethiops sabaeus) Wesley C. Warren,1 Anna J. Jasinska,2,3 Raquel García-Pérez,4 Hannes Svardal,5 Chad Tomlinson,1 Mariano Rocchi,6 Nicoletta Archidiacono,6 Oronzo Capozzi,6 Patrick Minx,1 Michael J. Montague,1 Kim Kyung,1 LaDeana W. Hillier,1 Milinn Kremitzki,1 Tina Graves,1 Colby Chiang,1 Jennifer Hughes,7 Nam Tran,2 Yu Huang,2 Vasily Ramensky,2 Oi-wa Choi,2 Yoon J. Jung,2 Christopher A. Schmitt,2 Nikoleta Juretic,8 Jessica Wasserscheid,8 Trudy R. Turner,9,10 Roger W. Wiseman,11 Jennifer J. Tuscher,11 Julie A. Karl,11 Jörn E. Schmitz,12 Roland Zahn,13 David H. O’Connor,11 Eugene Redmond,14 Alex Nisbett,14 Béatrice Jacquelin,15 Michaela C. Müller-Trutwin,15 Jason M. Brenchley,16 Michel Dione,17 Martin Antonio,17 Gary P. Schroth,18 Jay R. Kaplan,19 Matthew J. Jorgensen,19 Gregg W.C. Thomas,20 Matthew W. Hahn,20 Brian J. Raney,21 Bronwen Aken,22 Rishi Nag,22 Juergen Schmitz,23 Gennady Churakov,23,24 Angela Noll,23 Roscoe Stanyon,25 David Webb,26 Francoise Thibaud-Nissen,26 Magnus Nordborg,5 Tomas Marques-Bonet,4 Ken Dewar,8 George M. Weinstock,27 Richard K. Wilson,1 and Nelson B. Freimer2 1The Genome Institute, Washington University School of Medicine, St. Louis, Missouri 63108, USA; 2Center for Neurobehavioral Genetics, Semel Institute for Neuroscience and Human Behavior, University of California Los Angeles, Los Angeles, California 90095, USA; 3Institute of Bioorganic Chemistry, Polish Academy -
Emergence of Unique Primate T-Lymphotropic Viruses Among Central African Bushmeat Hunters
Emergence of unique primate T-lymphotropic viruses among central African bushmeat hunters Nathan D. Wolfe*†‡, Walid Heneine§, Jean K. Carr¶, Albert D. Garcia§, Vedapuri Shanmugam§, Ubald Tamoufe*ʈ, Judith N. Torimiroʈ, A. Tassy Prosser†, Matthew LeBretonʈ, Eitel Mpoudi-Ngoleʈ, Francine E. McCutchan*¶, Deborah L. Birx**, Thomas M. Folks§, Donald S. Burke*†, and William M. Switzer§†† Departments of *Epidemiology, †International Health, and ‡Molecular Microbiology and Immunology, Bloomberg School of Public Health, The Johns Hopkins University, Baltimore, MD 21205; §Laboratory Branch, Division of HIV͞AIDS Prevention, National Center for HIV, STD, and TB Prevention, Centers for Disease Control and Prevention, Atlanta, GA 30333; ¶Henry M. Jackson Foundation, Rockville, MD 20850; ʈArmy Health Research Center, Yaounde, Cameroon; and **Walter Reed Army Institute of Research, Rockville, MD 20850 Edited by John M. Coffin, Tufts University School of Medicine, Boston, and approved April 11, 2005 (received for review March 2, 2005) The human T-lymphotropic viruses (HTLVs) types 1 and 2 origi- There has been no evidence that STLVs cross into people nated independently and are related to distinct lineages of simian occupationally exposed to NHPs in laboratories and primate T-lymphotropic viruses (STLV-1 and STLV-2, respectively). These centers, as has been documented for other primate retroviruses, facts, along with the finding that HTLV-1 diversity appears to have including simian immunodeficiency virus, simian foamy virus resulted from multiple cross-species transmissions of STLV-1, sug- (SFV), and simian type D retrovirus (12–15). Nevertheless, gest that contact between humans and infected nonhuman pri- zoonotic transmission of STLV to human populations naturally mates (NHPs) may result in HTLV emergence.