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Kidneyseq™: a Comprehensive Inherited Kidney Disease Panel Iowa Institute of Human Genetics

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Kidneyseq™: a Comprehensive Inherited Kidney Disease Panel Iowa Institute of Human Genetics KidneySeq™: A Comprehensive Inherited Kidney Disease Panel 285 Newton Road, 5296 CBRB Iowa City, IA 52242-1078 Iowa Institute of Human Genetics Phone: 319-335-3688 Fax: 319-335-3484 Gene List www.medicine.uiowa.edu/humangenetics/ CLIA ID 16D2053873 CAP# 8864771 Ciliopathies /Tubulointerstitial diseases ARPKD - fibrocystin/polyductin PKHD1 AR Autosomal dominant polycystic kidney disease (ADPKD) PKD1, PKD2 AD Autosomal dominant tubulo interstitial disease (AD) UMOD AD ARL6, BBS1, BBS2, BBS4, BBS5, BBS7, BBS10, BBS12, AR/DR: BBS1 Bardet Biedl syndrome (BBS) CEP290 , MKKS, PTHB1, TRIM32, TTC8 AR: all others COACH syndrome CC2D2A, RPGRIP1L, TMEM67 AR HANAC syndrome COL4A1 AD Jeune syndrome IFT80, IFT140, DYNC2H1 AR AHI1, ARL13B, CC2D2A, CEP290, CEP41, CSPP1, Joubert syndrome INPP5E, KIF7, NPHP1, OFD1, RPGRIP1L, TMEM216, AR TCTN1, TMEM138, TMEM237, TMEM67, TTC21B AHI1, ATXN10, IQCB1, CEP290, GLIS2, INVS, NEK8, Juvenile Nephronophthisis (JN) NPHP1, NPHP3, NPHP4, RPGRIP1L, TMEM67, TTC21B, AR WDR19, XPNPEP3 Meckel syndrome (MKS) MKS1, TCTN2, TMEM67 AR B9D1, B9D2, CC2D2A, CEP290, MKS1, RPGRIP1L, TCTN2, Meckel syndrome (Meckel-Gruber syndrome) AR MEM216, TMEM67 Medullary Cystic Kidney Disease 2 UMOD AD Orofacial Digital syndrome 1 OFD1 XLD Renal cysts and diabetes syndrome HNF1B AD Serpentine fibula with polycystic kidney disease EYA1, NEK1, NOTCH2, TSC2 AD Sensenbrenner syndrome IFT122, IFT43, WDR19, WDR35, AR Senior-Loken syndrome-JN with retinitis pigmentosa CEP290, IQCB1, NPHP1, NPHP3, NPHP4, AR Disorders of tubular ion transport AR/AD: COL4A3 Alport syndrome COL4A3, COL4A4, COL4A5 AR: COL4A4 XLD: COL4A5 Apparent mineralocorticoid excess HSD11B2 AR APRT deficiency (stones and ESRD) APRT AR Autosomal dominant hypocalcemia, with Bartter syndrome CASR AD DR: CLCNKA Bartter syndrome BSND, CLCNKA, CLCNKB, KCNJ1, SLC12A1 AR: all others Cystinosis CTNS AR Cystinuria SLC3A1, SLC34A1, SLC7A9 AD & AR Dent disease CLCN5, OCRL XLR Distal renal tubular acidosis ATP6V0A4, ATP6V1B1, SLC4A1, AD & AR Familial hypertension with hyperkalemia (Gordon's syndrome) AD: WNK4, CUL3, KLHL3 CUL3, KLHL3, WNK1, WNK4 Pseudohypoaldosteronism AR: WNK1, KLHL3 Gitelman's syndrome CLCNKB, SLC12A3 AR AD: FGF23 Hypophosphatemic rickets DMP1, CLCN5, ENPP1, FGF23, PHEX, SLC34A3 AR: SLC34A3, ENPP1,DMP1 XLR: CLCN5, PHEX Isolated proximal renal tubular acidosis -Generalized proximal AR: SLC34A1 ATP7B, CLCN5, CTNS, EHHADH, FAH, HNF4A, SLC34A1 defect (Fanconi syndrome) AD: EHHADH, HNF4A Liddle Syndrome (AD) (Pseudoprimary hyperaldosteronism) SCNN1B, SCNN1G AD AD/AR: AQP2 Nephrogenic diabetes insipidus AQP2, AVPR2 XLR: AVPR2 Nephrogenic syndrome of inappropriate antidiuresis AVPR2 XLR Primary hyperoxaluria AGXT, GRHPR, HOGA1 AR AD: NR3C2 Pseudohypoaldosteronism NR3C2, SCNN1A, SCNN1B, SCNN1G, AR: SCNN1A, SCNN1G Renal Glucosuria SLC5A2 AR/AD Iowa Institute of Human Genetics KidneySeq™: A Comprehensive Inherited Kidney Disease Panel AD: CNNM2, FXYD2 Renal hypomagnesemia CLDN16, CLDN19, CNNM2, EGF, HNF1B, TRPM6 AR: CLDN16, CLDN19, TRPM6 Renal tubular acidosis, proximal, with ocular abnormalities SLC4A4 AR Glomerular Diseases Alstrom syndrome ALMS1 AR Congenital Nephrotic syndrome (Finnish type) NPHS1 AR Denys Drash syndrome; Frasier syndrome WT1 AD Diffuse Mesangial Sclerosis ARHGDIA, PLCE1, WT1 AR Epstein/Fechtner - Renal disease with macrothrombocytopenia MYH9 AD Fabry disease GLA XL ACTN4, ANLN, ARHGAP24, CD2AP, INF2, PAX2, TRPC6, AD: ACTN4, APOL1, CD2AP, INF2, Focal and Segmental Glomerulosclerosis (FSGS) AD WT1 TRPC6 Focal and Segmental Glomerulosclerosis (FSGS) AR CRB2, MYO1E, APOL1 AR ADCK4, ALG1, ARHGDIA, CUBN, LAMB2, NPHS1, NPHS2, Focal and Segmental Glomerulosclerosis (AR)/SRNS AR PLCE1, PDSS2, PMM2, PTPRO, SCARB2, ZMPSTE24 Galloway-Mowat Syndrome WDR73 AR Glomerulopathy with fibronectin deposits FN1 AD Hereditary systemid or renal amyloidosis NLRP3, APOA1, FGA, LYZ,B2M Muckle-Wells syndrome NLRP3 AD Nail Patella syndrome LMX1B AD Nephrotic syndrome - steroid sensitive PLCG2 Pierson syndrome - nephrotic syndrome with microcoria LAMB2 AR Thin Basement membrane disease (Benign familial hematuria) COL4A3, COL4A4 AD CAKUT Branchio-Oto-Renal syndrome EYA1, SIX1, SIX5 AD Cogan oculomotor apraxia NPHP1 AR Common CAKUT AGTR1 Fraser syndrome FRAS1, FREM2, GRIP1 AR Hypoparathyroidism, sensorineural deafness, ACE, AGT, CHD1L, DSTYK, FGF20, GATA3, HNF1B, REN, AD/AR and renal dysplasia ROBO2, SOX17, TRAP1, TNXB, UPK3A, WNT4, Isolated renal hypoplasia BMP4, SIX2 Isolated renal hypoplasia, and Renal-Coloboma syndrome PAX2 AR Isolated renal hypoplasia: Potter syndrome (oligohydramnios) RET, UPK3 AR renal adysplasia Kallmann syndrome KAL1 XL Mayer-Rokitansky-Küster-Hauser WNT4 Renal cysts and diabetes syndrome HNF1B AD Townes-Brocks syndrome SALL1 AD Other Acroorenalocular syndrome (Okihiro syndrome) SALL4 AD Mitochondrial cytopathies COQ2 AR Pallister-Hall syndrome GLI3 AD Rubinstein-Taybi syndrome CREBBP AD Schimke immuno-osseus dysplasia SMARCAL1 AR Simpson-Golabi-Behmel syndrome GPC3 XLR Smith-Lemli-Optiz syndrome DHCR7 Williams syndrome 7q 11.23 AD .
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