Aspects of the Morphology of Lernanthropus Kroyeri Van Beneden, Pathogenic Parasitic Copepod Using Scanning Electron Microscope
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The 2014 Golden Gate National Parks Bioblitz - Data Management and the Event Species List Achieving a Quality Dataset from a Large Scale Event
National Park Service U.S. Department of the Interior Natural Resource Stewardship and Science The 2014 Golden Gate National Parks BioBlitz - Data Management and the Event Species List Achieving a Quality Dataset from a Large Scale Event Natural Resource Report NPS/GOGA/NRR—2016/1147 ON THIS PAGE Photograph of BioBlitz participants conducting data entry into iNaturalist. Photograph courtesy of the National Park Service. ON THE COVER Photograph of BioBlitz participants collecting aquatic species data in the Presidio of San Francisco. Photograph courtesy of National Park Service. The 2014 Golden Gate National Parks BioBlitz - Data Management and the Event Species List Achieving a Quality Dataset from a Large Scale Event Natural Resource Report NPS/GOGA/NRR—2016/1147 Elizabeth Edson1, Michelle O’Herron1, Alison Forrestel2, Daniel George3 1Golden Gate Parks Conservancy Building 201 Fort Mason San Francisco, CA 94129 2National Park Service. Golden Gate National Recreation Area Fort Cronkhite, Bldg. 1061 Sausalito, CA 94965 3National Park Service. San Francisco Bay Area Network Inventory & Monitoring Program Manager Fort Cronkhite, Bldg. 1063 Sausalito, CA 94965 March 2016 U.S. Department of the Interior National Park Service Natural Resource Stewardship and Science Fort Collins, Colorado The National Park Service, Natural Resource Stewardship and Science office in Fort Collins, Colorado, publishes a range of reports that address natural resource topics. These reports are of interest and applicability to a broad audience in the National Park Service and others in natural resource management, including scientists, conservation and environmental constituencies, and the public. The Natural Resource Report Series is used to disseminate comprehensive information and analysis about natural resources and related topics concerning lands managed by the National Park Service. -
Salmon Louse Lepeophtheirus Salmonis on Atlantic Salmon
DISEASES OF AQUATIC ORGANISMS Vol. 17: 101-105, 1993 Published November 18 Dis. aquat. Org. Efficacy of ivermectin for control of the salmon louse Lepeophtheirus salmonis on Atlantic salmon 'Department of Fisheries and Oceans, Biological Sciences Branch. Pacific Biological Station, Nanaimo, British Columbia, Canada V9R 5K6 '~epartmentof Zoology, University of British Columbia, Vancouver, British Columbia, Canada V6T 2A9 ABSTRACT The eff~cacyof orally administered lveimectin against the common salmon louse Lepeophthelrus salmonls on Atlant~csalmon Salmo salar was invest~gatedunder laboratory condl- tions Both 3 and 6 doses of ivermectln at a targeted dose of 0 05 mg kg-' f~shadmin~stered in the feed every third day airested the development and reduced the Intensity of lnfect~onby L salmon~sThis IS the first report of dn eff~cacioustreatment agd~nstthe chalimus stages of sea lice Ser~oushead dnd doi- sal body lesions, typical of L salmon~sfeed~ng act~vity, which developed on the control f~shwere ab- sent from the ~vermect~n-tredtedf~sh lvermectin fed at these dosage reglmes resulted in a darken~ng of the fish, but appealed not to reduce their feeding activity KEY WORDS Ivermectin Lepeophthe~russalmonis Parasite control Paras~tetreatment - Salmon louse . Salmo salar Sea lice INTRODUCTION dichlorvos into the marine environment, have made the development of alternative treatment methods fol The marine ectoparasitic copepod Lepeophtheirus sea lice a priority salmonis is one of several species of sea lice that Orally administered ivermectln (22,23-Dihydro- commonly infect, and can cause serious disease in, avermectin B,) has been reported to be effective for sea-farmed salmonids (Brandal & Egidius 1979, the control of sea lice and other parasitic copepods on Kabata 1979, 1988, Pike 1989, Wootten et al. -
Ecology and Morphology of Copepods Developments in Hydrobiology 102
Ecology and Morphology of Copepods Developments in Hydrobiology 102 Series editor H. J. Dumont Ecology and Morphology of Copepods Proceedings of the 5th International Conference on Copepoda, Baltimore, USA, June 6-13, 1993 Edited by Frank D. Ferrari & Brian P. Bradley Reprinted from Hydrobiologia, vo/s 2921293 (1994) Springer-Science+Business Media, BV. Library of Congress Cataloging-in-Publication Data A C.I.P. Catalogue record for this book is available from the Library of Congress. ISBN 978-90-481-4490-7 ISBN 978-94-017-1347-4 (eBook) DOI 10.1007/978-94-017-1347-4 Printed an acid-free paper AII Rights Reserved © 1994 Springer Science+Business Media Dordrecht Originally published by Kluwer Academic Publishers in 1994 No part of the material protected by this copyright notice may be reproduced or utilized in any form or by any means, electronic or mechanical including photocopying, recording or by any information storage and retrieval system, without written permission from the copyright owner. v Contents Preface............................................................................................. ix Photograph and List of Participants x Maxilliped lecture How many copepods? by A.G. Humes 1 Systematics Acartia tonsa: a species new for the Black Sea fauna by G. Belmonte, M.G. Mazzocchi, I.Y. Prusova & N.V. Shadrin ......................... 9 A new species of Erebonectes (Copepoda, Calanoida) from marine caves on Caicos Islands, West Indies by A. Fosshagen & T.M. Iliffe .............................................................. 17 Nomenclature, redescription, and new record from Okinawa of Cymbasoma morii Sekiguchi, 1982 (Monstrilloida) by M.J. Grygier .............................................................................. 23 Copepod phylogeny: a reconsideration of Huys & Boxshall's 'parsimony versus homology' by J-S. -
Catching the Complexity of Salmon-Louse Interactions
Fish and Shellfish Immunology 90 (2019) 199–209 Contents lists available at ScienceDirect Fish and Shellfish Immunology journal homepage: www.elsevier.com/locate/fsi Full length article Catching the complexity of salmon-louse interactions T ∗ Cristian Gallardo-Escáratea, , Valentina Valenzuela-Muñoza, Gustavo Núñez-Acuñaa, Crisleri Carreraa, Ana Teresa Gonçalvesa, Diego Valenzuela-Mirandaa, Bárbara P. Benaventea, Steven Robertsb a Interdisciplinary Center for Aquaculture Research, Laboratory of Biotechnology and Aquatic Genomics, Department of Oceanography, Universidad de Concepción, Concepción, Chile b School of Aquatic and Fishery Sciences (SAFS), University of Washington, Seattle, USA ABSTRACT The study of host-parasite relationships is an integral part of the immunology of aquatic species, where the complexity of both organisms has to be overlayed with the lifecycle stages of the parasite and immunological status of the host. A deep understanding of how the parasite survives in its host and how they display molecular mechanisms to face the immune system can be applied for novel parasite control strategies. This review highlights current knowledge about salmon and sea louse, two key aquatic animals for aquaculture research worldwide. With the aim to catch the complexity of the salmon-louse interactions, molecular information gleaned through genomic studies are presented. The host recognition system and the chemosensory receptors found in sea lice reveal complex molecular components, that in turn, can be disrupted through specific molecules such as non-coding RNAs. 1. Introduction worldwide the most studied sea lice species are Lepeophtheirus salmonis and Caligus rogercresseyi [8–10]. Annually the salmon industry presents Host-parasite interactions are a complex relationship where one estimated losses of US $ 480 million, representing between 4 and 10% organism benefits the other and often where there is a negative impact of production costs [10]. -
Piscirickettsia Salmonis and the Sea Louse Caligus Rogercresseyi
Disease Resistance in Atlantic Salmon (Salmo salar): Coinfection of the Intracellular Bacterial Pathogen Piscirickettsia salmonis and the Sea Louse Caligus rogercresseyi Jean Paul Lhorente1, Jose´ A. Gallardo2*, Beatriz Villanueva3, Marı´a J. Caraban˜ o3, Roberto Neira1,4 1 Aquainnovo S.A, Puerto Montt, Chile, 2 Pontificia Universidad Cato´lica de Valparaı´so, Valparaı´so, Chile, 3 Departamento de Mejora Gene´tica Animal, INIA, Madrid, Spain, 4 Departamento de Produccio´n Animal, Facultad de Ciencias Agrono´micas, Universidad de Chile, Santiago, Chile Abstract Background: Naturally occurring coinfections of pathogens have been reported in salmonids, but their consequences on disease resistance are unclear. We hypothesized that 1) coinfection of Caligus rogercresseyi reduces the resistance of Atlantic salmon to Piscirickettsia salmonis; and 2) coinfection resistance is a heritable trait that does not correlate with resistance to a single infection. Methodology: In total, 1,634 pedigreed Atlantic salmon were exposed to a single infection (SI) of P. salmonis (primary pathogen) or coinfection with C. rogercresseyi (secondary pathogen). Low and high level of coinfection were evaluated (LC = 44 copepodites per fish; HC = 88 copepodites per fish). Survival and quantitative genetic analyses were performed to determine the resistance to the single infection and coinfections. Main Findings: C. rogercresseyi significantly increased the mortality in fish infected with P. salmonis (SI mortality = 251/545; LC mortality = 544/544 and HC mortality = 545/545). Heritability estimates for resistance to P. salmonis were similar and of 2 2 2 medium magnitude in all treatments (h SI = 0.2360.07; h LC = 0.1760.08; h HC = 0.2460.07). A large and significant genetic correlation with regard to resistance was observed between coinfection treatments (rg LC-HC = 0.9960.01) but not between the single and coinfection treatments (rg SI-LC = 20.1460.33; rg SI-HC = 0.3260.34). -
Host-Parasite Interaction of Atlantic Salmon (Salmo Salar) and the Ectoparasite Neoparamoeba Perurans in Amoebic Gill Disease
ORIGINAL RESEARCH published: 31 May 2021 doi: 10.3389/fimmu.2021.672700 Host-Parasite Interaction of Atlantic salmon (Salmo salar) and the Ectoparasite Neoparamoeba perurans in Amoebic Gill Disease † Natasha A. Botwright 1*, Amin R. Mohamed 1 , Joel Slinger 2, Paula C. Lima 1 and James W. Wynne 3 1 Livestock and Aquaculture, CSIRO Agriculture and Food, St Lucia, QLD, Australia, 2 Livestock and Aquaculture, CSIRO Agriculture and Food, Woorim, QLD, Australia, 3 Livestock and Aquaculture, CSIRO Agriculture and Food, Hobart, TAS, Australia Marine farmed Atlantic salmon (Salmo salar) are susceptible to recurrent amoebic gill disease Edited by: (AGD) caused by the ectoparasite Neoparamoeba perurans over the growout production Samuel A. M. Martin, University of Aberdeen, cycle. The parasite elicits a highly localized response within the gill epithelium resulting in United Kingdom multifocal mucoid patches at the site of parasite attachment. This host-parasite response Reviewed by: drives a complex immune reaction, which remains poorly understood. To generate a model Diego Robledo, for host-parasite interaction during pathogenesis of AGD in Atlantic salmon the local (gill) and University of Edinburgh, United Kingdom systemic transcriptomic response in the host, and the parasite during AGD pathogenesis was Maria K. Dahle, explored. A dual RNA-seq approach together with differential gene expression and system- Norwegian Veterinary Institute (NVI), Norway wide statistical analyses of gene and transcription factor networks was employed. A multi- *Correspondence: tissue transcriptomic data set was generated from the gill (including both lesioned and non- Natasha A. Botwright lesioned tissue), head kidney and spleen tissues naïve and AGD-affected Atlantic salmon [email protected] sourced from an in vivo AGD challenge trial. -
The Salmon Louse Genome: Copepod Features and Parasitic Adaptations
bioRxiv preprint doi: https://doi.org/10.1101/2021.03.15.435234; this version posted March 16, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. The salmon louse genome: copepod features and parasitic adaptations. Supplementary files are available here: DOI: 10.5281/zenodo.4600850 Rasmus Skern-Mauritzen§a,1, Ketil Malde*1,2, Christiane Eichner*2, Michael Dondrup*3, Tomasz Furmanek1, Francois Besnier1, Anna Zofia Komisarczuk2, Michael Nuhn4, Sussie Dalvin1, Rolf B. Edvardsen1, Sindre Grotmol2, Egil Karlsbakk2, Paul Kersey4,5, Jong S. Leong6, Kevin A. Glover1, Sigbjørn Lien7, Inge Jonassen3, Ben F. Koop6, and Frank Nilsen§b,1,2. §Corresponding authors: [email protected]§a, [email protected]§b *Equally contributing authors 1Institute of Marine Research, Postboks 1870 Nordnes, 5817 Bergen, Norway 2University of Bergen, Thormøhlens Gate 53, 5006 Bergen, Norway 3Computational Biology Unit, Department of Informatics, University of Bergen 4EMBL-The European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, CB10 1SD, UK 5 Royal Botanic Gardens, Kew, Richmond, Surrey TW9 3AE, UK 6 Department of Biology, University of Victoria, Victoria, British Columbia, V8W 3N5, Canada 7 Centre for Integrative Genetics (CIGENE), Department of Animal and Aquacultural Sciences, Norwegian University of Life Sciences, Oluf Thesens vei 6, 1433, Ås, Norway 1 bioRxiv preprint doi: https://doi.org/10.1101/2021.03.15.435234; this version posted March 16, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. -
Morphological and Phylogenetic Analysis of Caligus Spp Isolated from Lates Calcarifer Cultured in Floating Net Cages in Malaysia
MORPHOLOGICAL AND PHYLOGENETIC ANALYSIS OF CALIGUS SPP ISOLATED FROM LATES CALCARIFER CULTURED IN FLOATING NET CAGES IN MALAYSIA MUHD FAIZUL HELMI BIN AHAMAD HASMI FACULTY OF SCIENCE UNIVERSITY OF MALAYA KUALA LUMPUR 2013 MORPHOLOGICAL AND PHYLOGENETIC ANALYSIS OF CALIGUS SPP ISOLATED FROM LATES CALCARIFER CULTURED IN FLOATING NET CAGES IN MALAYSIA MUHD FAIZUL HELMI BIN AHAMAD HASMI DISSERTATION SUBMITTED IN FULFILLMENT OF THE REQUIREMENTS FOR THE DEGREE OF MASTER OF SCIENCE INSTITUTE OF BIOLOGICAL SCIENCES FACULTY OF SCIENCE UNIVERSITY OF MALAYA KUALA LUMPUR 2013 UNIVERSITI MALAYA ORIGINAL LITERARY WORK DECLARATION Name of Candidate: MUHD FAIZUL HELMI BIN AHAMAD HASMI I/C/Passport No: 850809045109 Regisration/Matric No.: SGR090128 Name of Degree: MASTER OF SCIENCE Title of Project Paper/Research Report/Dissertation/Thesis (“this Work”): “MORPHOLOGICAL AND PHYLOGENETIC ANALYSIS OF CALIGUS SPP ISOLATED FROM LATES CAILCARIFER CULTURED IN FLOATING NET CAGES IN MALAYSIA” Field of Study: MOLECULAR PARASITOLOGY I do solemnly and sincerely declare that: (1) I am the sole author/writer of this Work, (2) This Work is original, (3) Any use of any work in which copyright exists was done by way of fair dealing and for permitted purposes and any excerpt or extract from, or reference to or reproduction of any copyright work has been disclosed expressly and sufficiently and the title of the Work and its authorship have been acknowledged in this Work, (4) I do not have any actual knowledge nor do I ought reasonably to know that the making of this work -
APPENDIX 1 Classified List of Fishes Mentioned in the Text, with Scientific and Common Names
APPENDIX 1 Classified list of fishes mentioned in the text, with scientific and common names. ___________________________________________________________ Scientific names and classification are from Nelson (1994). Families are listed in the same order as in Nelson (1994), with species names following in alphabetical order. The common names of British fishes mostly follow Wheeler (1978). Common names of foreign fishes are taken from Froese & Pauly (2002). Species in square brackets are referred to in the text but are not found in British waters. Fishes restricted to fresh water are shown in bold type. Fishes ranging from fresh water through brackish water to the sea are underlined; this category includes diadromous fishes that regularly migrate between marine and freshwater environments, spawning either in the sea (catadromous fishes) or in fresh water (anadromous fishes). Not indicated are marine or freshwater fishes that occasionally venture into brackish water. Superclass Agnatha (jawless fishes) Class Myxini (hagfishes)1 Order Myxiniformes Family Myxinidae Myxine glutinosa, hagfish Class Cephalaspidomorphi (lampreys)1 Order Petromyzontiformes Family Petromyzontidae [Ichthyomyzon bdellium, Ohio lamprey] Lampetra fluviatilis, lampern, river lamprey Lampetra planeri, brook lamprey [Lampetra tridentata, Pacific lamprey] Lethenteron camtschaticum, Arctic lamprey] [Lethenteron zanandreai, Po brook lamprey] Petromyzon marinus, lamprey Superclass Gnathostomata (fishes with jaws) Grade Chondrichthiomorphi Class Chondrichthyes (cartilaginous -
Observing Copepods Through a Genomic Lens James E Bron1*, Dagmar Frisch2, Erica Goetze3, Stewart C Johnson4, Carol Eunmi Lee5 and Grace a Wyngaard6
Bron et al. Frontiers in Zoology 2011, 8:22 http://www.frontiersinzoology.com/content/8/1/22 DEBATE Open Access Observing copepods through a genomic lens James E Bron1*, Dagmar Frisch2, Erica Goetze3, Stewart C Johnson4, Carol Eunmi Lee5 and Grace A Wyngaard6 Abstract Background: Copepods outnumber every other multicellular animal group. They are critical components of the world’s freshwater and marine ecosystems, sensitive indicators of local and global climate change, key ecosystem service providers, parasites and predators of economically important aquatic animals and potential vectors of waterborne disease. Copepods sustain the world fisheries that nourish and support human populations. Although genomic tools have transformed many areas of biological and biomedical research, their power to elucidate aspects of the biology, behavior and ecology of copepods has only recently begun to be exploited. Discussion: The extraordinary biological and ecological diversity of the subclass Copepoda provides both unique advantages for addressing key problems in aquatic systems and formidable challenges for developing a focused genomics strategy. This article provides an overview of genomic studies of copepods and discusses strategies for using genomics tools to address key questions at levels extending from individuals to ecosystems. Genomics can, for instance, help to decipher patterns of genome evolution such as those that occur during transitions from free living to symbiotic and parasitic lifestyles and can assist in the identification of genetic mechanisms and accompanying physiological changes associated with adaptation to new or physiologically challenging environments. The adaptive significance of the diversity in genome size and unique mechanisms of genome reorganization during development could similarly be explored. -
Characterization of the Salmon Louse Lepeophtheirus Salmonis
Marine Genomics xxx (xxxx) xxx–xxx Contents lists available at ScienceDirect Marine Genomics journal homepage: www.elsevier.com/locate/margen Characterization of the salmon louse Lepeophtheirus salmonis miRNome: Sex- biased differences related to the coding and non-coding RNA interplay ⁎ Gustavo Núñez-Acuña, Cristian Gallardo-Escárate Laboratory of Biotechnology and Aquatic Genomics, Interdisciplinary Center for Aquaculture Research (INCAR), University of Concepción, Concepción, Chile ARTICLE INFO ABSTRACT Keywords: The salmon louse Lepeophtheirus salmonis is a marine ectoparasite that has a detrimental impact on salmon farms. miRNAs Genomic knowledge of adult stages is critical to understand the reproductive success and lifecycle completion of Lepeophtheirus salmonis this species. Here, we report a comprehensive characterization of the L. salmonis miRNome with emphasis on the Small RNA sequencing sex-differences of the parasite. Small-RNA sequencing was conducted on males and females, and mRNA-se- Sex differentiation quencing was also conducted to identify miRNA-targets at these stages. Based on bioinformatics analyses, 3101 putative miRNAs were found in L. salmonis, including precursors and variants. The most abundant and over- expressed miRNAs belonged to the bantam, mir-100, mir-1, mir-263a and mir-276 families, while the most differentially expressed mRNAs corresponded to genes related to reproduction and other biological processes involved in cell-differentiation. Target analyses revealed that the most up-regulated miRNAs in males can act by inhibiting the expression of genes related to female differentiation such as vitellogenin genes. Target prediction and expression patterns suggested a pivotal role of miRNAs in the reproductive development of L. salmonis. 1. Introduction inhabit the marine environment. -
RHODES MELANIE 33.Pdf
VITA Melanie Anne Rhodes, daughter of Terry S. (Wood) Rhodes-Forsberg and Jay S. Forsberg, was born on November 16, 1979 in Phoenix, AZ. She graduated from Calvert Senior High School in Prince Frederick, MD in June 1997. In August 1997, she entered Long Island University-Southampton College in Southampton, NY. She graduated with a Bachelor of Science degree in Marine Science, Biology concentration in May 2001. While attending college, she gained work experience through internships at the Wisconsin Aquatic Technology and Environmental Research Institute in Milwaukee, WI and the Chesapeake Biological Laboratory in Solomons, MD. She participated in the SEAmester program in the Fall of 1999, sailing from Boston, MA to San Juan, PR, on the tall ship, Harvey Gamage. During the Winter 2001 term she participated in a Tropical Marine Biology program in the South Pacific islands of the Kingdom of Tonga. From March 2001 to September 2001, she was employed by the East Hampton Town Shellfish Hatchery in Montuak, NY as a Hatchery and Field Technician. Returning to Maryland, she was employed from January 2002 to March 2003 as an Aquatic Biologist by Wildlife International, Ltd. in Easton, MD. From April 2003 to June 2003 she lived on board the Schooner A.J. Meerwald working as a Deckhand and Environmental Educator. In September 2003, she entered the Master of Science Program at Auburn University. iv THESIS ABSTRACT EVALUATION OF FABREA SALINA AND OTHER CILIATES AS ALTERNATIVE LIVE FOODS FOR FIRST-FEEDING RED SNAPPER, LUTJANUS CAMPECHANUS, LARVAE Melanie Anne Rhodes Master of Science, August 8, 2005 (B.S.