A Novel Acidification Mechanism for Greatly Enhanced Oxygen Supply To
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O2 Secretion in the Eye and Swimbladder of Fishes
1641 The Journal of Experimental Biology 209, 1641-1652 Published by The Company of Biologists 2007 doi:10.1242/jeb.003319 Historical reconstructions of evolving physiological complexity: O2 secretion in the eye and swimbladder of fishes Michael Berenbrink School of Biological Sciences, The University of Liverpool, Biosciences Building, Crown Street, Liverpool, L69 7ZB, UK e-mail: [email protected] Accepted 12 March 2007 Summary The ability of some fishes to inflate their compressible value of haemoglobin. These changes predisposed teleost swimbladder with almost pure oxygen to maintain neutral fishes for the later evolution of swimbladder oxygen buoyancy, even against the high hydrostatic pressure secretion, which occurred at least four times independently several thousand metres below the water surface, has and can be associated with increased auditory sensitivity fascinated physiologists for more than 200·years. This and invasion of the deep sea in some groups. It is proposed review shows how evolutionary reconstruction of the that the increasing availability of molecular phylogenetic components of such a complex physiological system on a trees for evolutionary reconstructions may be as important phylogenetic tree can generate new and important insights for understanding physiological diversity in the post- into the origin of complex phenotypes that are difficult to genomic era as the increase of genomic sequence obtain with a purely mechanistic approach alone. Thus, it information in single model species. is shown that oxygen secretion first evolved in the eyes of fishes, presumably for improved oxygen supply to an Glossary available online at avascular, metabolically active retina. Evolution of this http://jeb.biologists.org/cgi/content/full/210/9/1641/DC1 system was facilitated by prior changes in the pH dependence of oxygen-binding characteristics of Key words: oxygen secretion, Root effect, rete mirabile, choroid, haemoglobin (the Root effect) and in the specific buffer swimbladder, phylogenetic reconstruction. -
Respiratory Disorders of Fish
This article appeared in a journal published by Elsevier. The attached copy is furnished to the author for internal non-commercial research and education use, including for instruction at the authors institution and sharing with colleagues. Other uses, including reproduction and distribution, or selling or licensing copies, or posting to personal, institutional or third party websites are prohibited. In most cases authors are permitted to post their version of the article (e.g. in Word or Tex form) to their personal website or institutional repository. Authors requiring further information regarding Elsevier’s archiving and manuscript policies are encouraged to visit: http://www.elsevier.com/copyright Author's personal copy Disorders of the Respiratory System in Pet and Ornamental Fish a, b Helen E. Roberts, DVM *, Stephen A. Smith, DVM, PhD KEYWORDS Pet fish Ornamental fish Branchitis Gill Wet mount cytology Hypoxia Respiratory disorders Pathology Living in an aquatic environment where oxygen is in less supply and harder to extract than in a terrestrial one, fish have developed a respiratory system that is much more efficient than terrestrial vertebrates. The gills of fish are a unique organ system and serve several functions including respiration, osmoregulation, excretion of nitroge- nous wastes, and acid-base regulation.1 The gills are the primary site of oxygen exchange in fish and are in intimate contact with the aquatic environment. In most cases, the separation between the water and the tissues of the fish is only a few cell layers thick. Gills are a common target for assault by infectious and noninfectious disease processes.2 Nonlethal diagnostic biopsy of the gills can identify pathologic changes, provide samples for bacterial culture/identification/sensitivity testing, aid in fungal element identification, provide samples for viral testing, and provide parasitic organisms for identification.3–6 This diagnostic test is so important that it should be included as part of every diagnostic workup performed on a fish. -
Ventilation Systems • Cilliary Action • Muscle Pumps – Buccal Pumps – Body Wall • Body Positioning • Ram Ventilation • Negative Pressure Diaphragms
3/27/2017 Ventilation • Increase exchange rate by moving medium over respiratory surface • Water – ~800x heavier than air, potentially expensive ventilation – Oxygen per unit mass • Air: 1.3 g contains 210 ml O2 • Water: 1000 g contains 5-10 ml O2 • Air – diffusion can only occur once gasses dissolved, all respiratory surfaces must be wet – Respiratory flux Systems • Ventilation system - devote resources to anatomical structures or behaviors aimed at increasing ventilation and thus potential gas exchange • Circulatory system – devote resources to anatomical structures to more efficiently move gasses (and other things) around the body – More efficient control and delivery 1 3/27/2017 Types of Ventilation Systems • Cilliary action • Muscle pumps – Buccal pumps – Body wall • Body positioning • Ram ventilation • Negative pressure diaphragms Air/Water Interaction with Surface 2 3/27/2017 Types of respiratory structures • Skin (cutaneous) • Gills – protruding structure, increases surface area – Tuft – Filament – Lamellar • Trachea – internalized but not centralized • Lung – internalized and centralized structure Cutaneous exchange • Most animals get some oxygen this way • Requires thin, moist skin • Flow of deoxygenated body fluids near skin surface • Ontogenetic trends – most larval fish do not use gills • Some secondary loss of lungs (Plethodontidae) • Ventilation (Lake Titicaca frog) 3 3/27/2017 Trachea systems • Multiple independent tubes • Spriacles for ventilation • Branches supply tissues directly • Some connected to “gills” • Body movement for ventilation Fish Gills • Ventilation – One way flow – pumps: buccal, opercular, stomach, esophageal – ram ventilation • Ventilation to profusion ratio = volume pumped to volume in contact with gills – Higher value requires more gill surface area 4 3/27/2017 • Types of gills – Holobranch: lamellae on both sides of the fillament – Hemibranch: lamellae on one side – Pseudobranch: no true lamellae Gills 5 3/27/2017 Gill area • Greater in marine than freshwater • Greater for more metabolically active fish (e.g. -
Water Qualityquality
WaterWater QualityQuality James M. Ebeling, Ph.D. Research Engineer Aquaculture Systems Technologies, LLC New Orleans, LA Recirculating Aquaculture Systems Short Course The success of a commercial aquaculture enterprise depends on providing the optimum environment for rapid growth at the minimum cost of resources and capital. One of the major advantages of intensive recirculation systems is the ability to manage the aquatic environment and critical water quality parameters to optimize fish health and growth rates. Although the aquatic environment is a complex eco-system consisting of multiple water quality variables, it is fortunate that only a few of these parameters play decisive roles. These critical parameters are temperature, suspended solids, and pH and concentrations of dissolved oxygen, ammonia, nitrite, CO2, and alkalinity. Each individual parameter is important, but it is the aggregate and interrelationship of all the parameters that influence the health and growth rate of the fish. This unit reviews some of the most critical water quality parameters, recommended maximum or minimum concentrations, and how to measure them. Seceding chapters introduce engineering unit processes that are used to either remove, maintain or add to the system the limiting water quality factor. 1 The Aquatic Environment Unless You’re a Fish, You Can’t Tell By Sticking Your Fin in the Water! Critical Parameters • dissolved oxygen • temperature •pH • un-ionized ammonia • nitrite • nitrate • carbon dioxide • alkalinity • solids Recirculating Aquaculture Systems Short Course Unless you’re a Fish, you can’t tell whether the water quality is optimal by just looking at the water or even the fish. The aquatic environment is totally alien to we air breathers and thus some form of water quality monitoring and measurement is extremely critical to any successful operation. -
Respiration: an Introduction JJ Cech Jr., University of California, Davis, CA, USA CJ Brauner, University of British Columbia, Vancouver, BC, Canada
GAS EXCHANGE Respiration: An Introduction JJ Cech Jr., University of California, Davis, CA, USA CJ Brauner, University of British Columbia, Vancouver, BC, Canada ª 2011 Elsevier Inc. All rights reserved. Introduction Tissue Respiration The Environment: Water and Air as Respiratory Media Whole Animal and Techniques in Respiratory Ventilation and Gas-Exchange Organs Physiology Gas Transport and Exchange Further Reading Glossary Mitochondria Organelles that produce most of the Bohr effect Effect of the proton concentration (pH) aerobic energy required by the cell. on the oxygen affinity of hemoglobin. P50 The oxygen partial pressure at half-maximal oxygen Carbonic anhydrase A zinc metalloenzyme that saturation of blood or hemoglobin. reversibly catalyzes the reaction of CO2 and H2O to form Partial pressure The atmospheric pressure exerted + � H and HCO3 . by O2 alone proportional to the total concentration of Diffusion Net movement of a solute from an area of this gas. It is typically measured in either mmHg (torr) higher concentration to an area of lower concentration. or kPa. Equilibrium Pertaining to the situation when all forces Respiratory cascade A model of gas exchange in acting are balanced by others resulting in a stable which gas is viewed as flowing through a series of unchanging system. resistances from the environment to the tissues or vice Haldane effect Proton binding to hemoglobin (as a versa. The model is based on the analogy of water function of oxygenation). flowing down a series of cascades with the difference Hypoxia Low partial pressures of oxygen in external or being that gas flow is driven by differences in partial internal environments. -
1.0 Anatomy and Physiology of Salmonids
Canada Department of Fisheries and Oceans AnimalUser Training Template 1.0 Anatomy and Physiology of Salmonids 1.1 Introduction: This template is intended for use by instructors to train the Department of Fisheries and Oceans (DFO) staff and students in the anatomy and physiology of salmonids. Templates are used to provide the minimum requirements necessary in a training exercise, but the instructor may add additional material. An experienced instructor must demonstrate the methods outlined in this template. Handson training of staff is a requirement for facility approval by the Canadian Council on Animal Care, of which DFO is a member. This template is part of a comprehensive DFO Science Branch series on training for users of aquatic research animals. 1.2 Rationale: There are over 50 species of fish and shellfish used as laboratory animals by the scientific community in Canada alone. Salmonid species are among the most common laboratory animals and include but are not limited to: Rainbow trout, Cutthroat trout, Atlantic salmon, Brook trout, Steelhead salmon, Brown trout, Arctic char, Lake trout, Chum salmon, Sockeye salmon, Pink salmon, Coho salmon and Chinook salmon. In order to properly identify abnormalities and signs of disease or distress in fish maintained for the purposes of scientific study, it is important to recognize and understand the basic anatomy and physiology of the species being studied. An understanding of anatomy is critical and ensures proper and humane methods are used for procedures such as blood sampling and tagging or marking with minimal longterm effect on the fish. 1.3 Authority: The staff, consultant veterinarian or Animal Care Committee is responsible for providing information about anatomy and physiology of the fish species used for scientific study in their respective regions. -
Fish Diversity & Diseases Archaebacteria
Water Biology - PHC 6937 Fish Diversity & Diseases Andrew S. Kane, Ph.D. University of Florida Environmental Health Program, PHHP Center for Environmental and Human Toxicology Emerging Pathogens Institute Carl Woese 1977 http://nai.nasa.gov Archaebacteria Thermophiles, halophyles acidophiles and anerobes Midway Geyser Basin, Yellowstone National Park, WY Photo by Wing-Chi Poon 1 Animal Diversity Fish Diversity Class Agnatha (jawless fishes): Lamprey, hagfish Fish Diversity Class Chondrichthyes (sharks, skates, rays) Subclass Elasmobrachii Subclass Holocephali 2 Fish Diversity Class Osteichthyes (“boney fish”) Subclass Sarcoptyergii (fleshy-fin fishes) Crossopterygians (Latimera) Dipnoi lungfish Fish Diversity Class Osteichthyes (“boney fish”) Subclass Actinopterygii (spiney-fin fishes) Infraclass Chondrostei (reedfish, sturgeon, paddlefish) Fish Diversity Class Osteichthyes (“boney fish”) Subclass Actinopterygii (spiney-fin fishes) Infraclass Holostei (gars and bowfin) 3 Fish Diversity Class Osteichthyes (“boney fish”) Subclass Actinopterygii (spiney-fin fishes) Infraclass Telostei (most other boney fish) Viva la difference - renal, pancreatic, rectal - bouyancy - sensory (LL, tastebuds, barbels, weberian oss, pseudobranch, smell) - teeth (max, premax, vomer, palatine, hyoglossal, etc) - skin (mucus, taste, alarm, absorption) - gills (respiration, ionic balance, absorption) - communication (alarm, sound, color) - gut (+/- stomach, length, pyloric caecae, pneumatic duct) - electric / reception and production - light production - water quality effects and response Sex in Fishes - hermaphroditism - functional / non-functional - sequential: - protandrous - protogynous 4 Internal Anatomy Fish Renal System - anterior / posterior kidneys - structure differences - glomerular / aglomerular - hematopoeisis - ion regulation / gills Gills Gill arch: sagittal section (Bouins, H&E, Bar = 90.2 µm). 1. gill raker; 2. mucosal epithelium; 3. basement membrane; 4. submucosa; 5. bone; 6. adipose tissue; 7. sinous venules; 8. afferent branchial artery; 9. primary lamellae; 10. -
A Collection of Marine Fishes from Angola, with Notes on New Distribution Records
A collection of marine fishes from Angola, with notes on new distribution records Denis Tweddle and M. Eric Anderson South African Institute for Aquatic Biodiversity, Private Bag 1015, Grahamstown 6140, RSA Received 16 March 2007; accepted 1 October 2007 ABSTRACT. Collections of fishes from demersal trawl surveys to 800 m depth off the Angolan coast in 2001, 2002 and 2005 resulted in several range extensions tabulated here. Specimens of species poorly represented in previous collections allowed improved diagnoses of Myxine ios, Torpedo bauchotae, Dysommina rugosa, Pisodonophis semicinctus, Xenomystax congroides, Lestidiops cadenati, Ophidion lozanoi, Cataetyx bruuni, Dibranchus atlanticus, Diceratias pileatus, Himantolophus paucifilosus,Neomerinthe folgori, Careproctus albescens, Paracaristius maderensis and Pachycara crossacanthum. All specimens accessioned into the Fish Collection of the South African Institute for Aquatic Biodiversity are listed and colour plates show a selection of species from the trawl catches. KEY WORDS: demersal trawl, Gulf of Guinea, Benguela Current, range extensions, species diagnoses INTRODUCTION Aquatic Biodiversity (SAIAB) with an opportunity to make large representative collections of the fishesof the The Angolan coast is an area of high biodiversity region. The collection had two purposes, (1) to enhance interest as it forms the boundary between the fauna of the Institute’s existing fishcollection, and (2) to provide the temperate Benguela current, arising from upwelling the fisheries researchers on the vessel with an updated off the Namibian coast to the south, and the tropical species list, the documentation of range extensions and waters of the Gulf of Guinea to the north. The sea off descriptions of the rarer species encountered. Angola therefore supports a rich and diverse fauna. -
LOCALIZATION of Na+, K+-ATPASE and OTHER ENZYMES in TELEOST PSEUDOBRANCH
LOCALIZATION OF Na+, K+-ATPASE AND OTHER ENZYMES IN TELEOST PSEUDOBRANCH I. Biochemical Characterization of Subcellular Fractions LESLIE A . DENDY, RUSSELL L . DETER, and CHARLES W . PHILPOTT Downloaded from http://rupress.org/jcb/article-pdf/57/3/675/1266502/675.pdf by guest on 29 September 2021 From the Department of Biology, Rice University, Houston, Texas 77001 ; and the Department of Cell Biology, Baylor College of Medicine, Houston, Texas 77025 . Dr. Dendy's present address is the B . F. Stolinsky Laboratories, Department of Pediatrics, University of Colorado Medical Center, Denver, Colorado 80220 . ABSTRACT In an effort to determine the subcellular localization of sodium- and potassium-activated adenosine triphosphatase (Na+, K+-ATPase) in the pseudobranch of the pinfish Lagodon rhomboides, this tissue was fractionated by differential centrifugation and the activities of several marker enzymes in the fractions were measured . Cytochrome c oxidase was found primarily in the mitochondrial-light mitochondrial (M+L) fraction . Phosphoglucomutase appeared almost exclusively in the soluble (S) fraction . Monoamine oxidase was concen- trated in the nuclear (N) fraction, with a significant amount also in the microsomal (P) fraction but little in M+L or S . Na+, K+-ATPase and ouabain insensitive Mgt+-ATPase were distributed in N, M+L, and P, the former having its highest specific activity in P and the latter in M+L . Rate sedimentation analysis of the M +L fraction indicated that cytochrome c oxidase and Mgt+-ATPase were associated with a rapidly sedimenting particle population (presumably mitochondria), while Na+, K+-ATPase was found pri- marily in a slowly sedimenting component. At least 75 % of the Na+, K+-ATPase in M +L appeared to be associated with structures containing no Mgt+-ATPase . -
Unravelling the Complex Duplication History of Deuterostome Glycerol Transporters
cells Article Unravelling the Complex Duplication History of Deuterostome Glycerol Transporters Ozlem Yilmaz 1,2 , François Chauvigné 3, Alba Ferré 3, Frank Nilsen 1, Per Gunnar Fjelldal 2, Joan Cerdà 3 and Roderick Nigel Finn 1,3,* 1 Department of Biological Sciences, Bergen High Technology Centre, University of Bergen, 5020 Bergen, Norway; [email protected] (O.Y.); [email protected] (F.N.) 2 Institute of Marine Research, NO-5817 Bergen, Norway; [email protected] 3 IRTA-Institute of Biotechnology and Biomedicine (IBB), Universitat Autònoma de Barcelona, 08193 Bellaterra (Cerdanyola del Vallès), Spain; [email protected] (F.C.); [email protected] (A.F.); [email protected] (J.C.) * Correspondence: nigel.fi[email protected] Received: 18 June 2020; Accepted: 8 July 2020; Published: 10 July 2020 Abstract: Transmembrane glycerol transport is an ancient biophysical property that evolved in selected subfamilies of water channel (aquaporin) proteins. Here, we conducted broad level genome (>550) and transcriptome (>300) analyses to unravel the duplication history of the glycerol-transporting channels (glps) in Deuterostomia. We found that tandem duplication (TD) was the major mechanism of gene expansion in echinoderms and hemichordates, which, together with whole genome duplications (WGD) in the chordate lineage, continued to shape the genomic repertoires in craniates. Molecular phylogenies indicated that aqp3-like and aqp13-like channels were the probable stem subfamilies in craniates, with WGD generating aqp9 and aqp10 in gnathostomes but aqp7 arising through TD in Osteichthyes. We uncovered separate examples of gene translocations, gene conversion, and concerted evolution in humans, teleosts, and starfishes, with DNA transposons the likely drivers of gene rearrangements in paleotetraploid salmonids. -
Fishes of the World
Fishes of the World Fishes of the World Fifth Edition Joseph S. Nelson Terry C. Grande Mark V. H. Wilson Cover image: Mark V. H. Wilson Cover design: Wiley This book is printed on acid-free paper. Copyright © 2016 by John Wiley & Sons, Inc. All rights reserved. Published by John Wiley & Sons, Inc., Hoboken, New Jersey. Published simultaneously in Canada. No part of this publication may be reproduced, stored in a retrieval system, or transmitted in any form or by any means, electronic, mechanical, photocopying, recording, scanning, or otherwise, except as permitted under Section 107 or 108 of the 1976 United States Copyright Act, without either the prior written permission of the Publisher, or authorization through payment of the appropriate per-copy fee to the Copyright Clearance Center, 222 Rosewood Drive, Danvers, MA 01923, (978) 750-8400, fax (978) 646-8600, or on the web at www.copyright.com. Requests to the Publisher for permission should be addressed to the Permissions Department, John Wiley & Sons, Inc., 111 River Street, Hoboken, NJ 07030, (201) 748-6011, fax (201) 748-6008, or online at www.wiley.com/go/permissions. Limit of Liability/Disclaimer of Warranty: While the publisher and author have used their best efforts in preparing this book, they make no representations or warranties with the respect to the accuracy or completeness of the contents of this book and specifically disclaim any implied warranties of merchantability or fitness for a particular purpose. No warranty may be createdor extended by sales representatives or written sales materials. The advice and strategies contained herein may not be suitable for your situation. -
The Amphibious Fish Kryptolebias Marmoratus Uses Different
© 2014. Published by The Company of Biologists Ltd | The Journal of Experimental Biology (2014) 217, 3988-3995 doi:10.1242/jeb.110601 RESEARCH ARTICLE The amphibious fish Kryptolebias marmoratus uses different strategies to maintain oxygen delivery during aquatic hypoxia and air exposure Andy J. Turko*, Cayleih E. Robertson, Kristin Bianchini, Megan Freeman and Patricia A. Wright ABSTRACT Taking advantage of aerial O2 presents several challenges for Despite the abundance of oxygen in atmospheric air relative to water, fishes. Water-breathing fishes exchange respiratory gases across the the initial loss of respiratory surface area and accumulation of carbon gills but during emersion the gill lamellae typically collapse and dioxide in the blood of amphibious fishes during emersion may result coalesce, reducing the surface area available for respiration. in hypoxemia. Given that the ability to respond to low oxygen Accumulation of CO2 in the blood of emersed fishes, resulting from conditions predates the vertebrate invasion of land, we hypothesized the low solubility of CO2 in air versus water, can also impair the that amphibious fishes maintain O2 uptake and transport while ability of hemoglobin (Hb) to bind and transport O2 (Rahn, 1966; emersed by mounting a co-opted hypoxia response. We acclimated Ultsch, 1987). High blood partial pressure of CO2 (PCO2) may the amphibious fish Kryptolebias marmoratus, which are able to reduce intraerythrocytic pH and reduce the affinity of Hb for O2 by remain active for weeks in both air and water, for 7 days to normoxic the Bohr effect, which prevents O2 loading at the gas-exchange brackish water (15‰, ~21kPa O2; control), aquatic hypoxia surface (Bohr et al., 1904).