Isolation of Ascomycetous Fungi from a Tertiary Institution Campus Soil
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Soil and Litter Invertebrates and Heterotrophic Process: 1997 Revision
ES/ER/TM-126/R2 Toxicological Benchmarks for Contaminants of Potential Concern for Effects on Soil and Litter Invertebrates and Heterotrophic Process: 1997 Revision This document has been approved by the East Tennessee Technology Park Technical Information Office for release to the public. Date: ES/ER/TM-126/R2 Toxicological Benchmarks for Contaminants of Potential Concern for Effects on Soil and Litter Invertebrates and Heterotrophic Process: 1997 Revision R. A. Efroymson M. E. Will G. W. Suter II Date Issued—November 1997 Prepared for the U.S. Department of Energy Office of Environmental Management under budget and reporting code EW 20 LOCKHEED MARTIN ENERGY SYSTEMS, INC. managing the Environmental Management Activities at the East Tennessee Technology Park Oak Ridge Y-12 Plant Oak Ridge National Laboratory Paducah Gaseous Diffusion Plant Portsmouth Gaseous Diffusion Plant under contract DE-AC05-84OR21400 for the U.S. DEPARTMENT OF ENERGY PREFACE This report presents a standard method for deriving benchmarks for the purpose of “contaminant screening,” performed by comparing measured ambient concentrations of chemicals. The work was performed under Work Breakdown Structure 1.4.12.2.3.04.07.02 (Activity Data Sheet 8304). In addition, this report presents sets of data concerning the effects of chemicals in soil on invertebrates and soil microbial processes, benchmarks for chemicals potentially associated with United States Department of Energy sites, and literature describing the experiments from which data were drawn for benchmark derivation. iii ACKNOWLEDGMENTS The authors would like to thank Carla Gunderson and Art Stewart for their helpful reviews of the document. In addition, the authors would like to thank Christopher Evans and Alexander Wooten for conducting part of the literature review. -
Species-Specific Impact of Fusarium Infection on the Root and Shoot
pathogens Article Species-Specific Impact of Fusarium Infection on the Root and Shoot Characteristics of Asparagus Roxana Djalali Farahani-Kofoet, Katja Witzel, Jan Graefe, Rita Grosch and Rita Zrenner * Plant-Microbe Systems, Leibniz Institute of Vegetable and Ornamental Crops (IGZ) e.V., 14979 Großbeeren, Germany; [email protected] (R.D.F.-K.); [email protected] (K.W.); [email protected] (J.G.); [email protected] (R.G.) * Correspondence: [email protected] Received: 25 March 2020; Accepted: 22 June 2020; Published: 24 June 2020 Abstract: Soil-borne pathogens can have considerable detrimental effects on asparagus (Asparagus officinalis) growth and production, notably caused by the Fusarium species F. oxysporum f.sp. asparagi, F. proliferatum and F. redolens. In this study, their species-specific impact regarding disease severity and root morphological traits was analysed. Additionally, various isolates were characterised based on in vitro physiological activities and on protein extracts using matrix-assisted laser desorption ionisation time-of-flight mass spectrometry (MALDI-TOF MS). The response of two asparagus cultivars to the different Fusarium species was evaluated by inoculating experiments. Differences in aggressiveness were observed between Fusarium species and their isolates on roots, while no clear disease symptoms became visible in ferns eight weeks after inoculation. F. redolens isolates Fred1 and Fred2 were the most aggressive strains followed by the moderate aggressive F. proliferatum and the less and almost non-aggressive F. oxysporum isolates, based on the severity of disease symptoms. Fungal DNA in stem bases and a significant induction of pathogenesis-related gene expression was detectable in both asparagus cultivars. A significant negative impact of the pathogens on the root characteristics total root length, volume, and surface area was detected for each isolate tested, with Fred1 causing the strongest effects. -
Low-Density Polyethylene Film Biodegradation Potential by Fungal Species from Thailand
Journal of Fungi Article Low-Density Polyethylene Film Biodegradation Potential by Fungal Species from Thailand Sarunpron Khruengsai 1, Teerapong Sripahco 1 and Patcharee Pripdeevech 1,2,* 1 School of Science, Mae Fah Luang University, Chiang Rai 57100, Thailand; [email protected] (S.K.); [email protected] (T.S.) 2 Center of Chemical Innovation for Sustainability (CIS), Mae Fah Luang University, Chiang Rai 57100, Thailand * Correspondence: [email protected] Abstract: Accumulated plastic waste in the environment is a serious problem that poses an ecological threat. Plastic waste has been reduced by initiating and applying different alternative methods from several perspectives, including fungal treatment. Biodegradation of 30 fungi from Thailand were screened in mineral salt medium agar containing low-density polyethylene (LDPE) films. Diaporthe italiana, Thyrostroma jaczewskii, Collectotrichum fructicola, and Stagonosporopsis citrulli were found to grow significantly by culturing with LDPE film as the only sole carbon source compared to those obtained from Aspergillus niger. These fungi were further cultured in mineral salt medium broth containing LDPE film as the sole carbon source for 90 days. The biodegradation ability of these fungi was evaluated from the amount of CO2 and enzyme production. Different amounts of CO2 were released from D. italiana, T. jaczewskii, C. fructicola, S. citrulli, and A. niger culturing with LDPE film, ranging from 0.45 to 1.45, 0.36 to 1.22, 0.45 to 1.45, 0.33 to 1.26, and 0.37 to 1.27 g/L, respectively. These fungi were able to secrete a large amount of laccase enzyme compared to manganese peroxidase, and lignin peroxidase enzymes detected under the same conditions. -
Mycology Proficiency Testing Program
Mycology Proficiency Testing Program Test Event Critique January 2014 Table of Contents Mycology Laboratory 2 Mycology Proficiency Testing Program 3 Test Specimens & Grading Policy 5 Test Analyte Master Lists 7 Performance Summary 11 Commercial Device Usage Statistics 13 Mold Descriptions 14 M-1 Stachybotrys chartarum 14 M-2 Aspergillus clavatus 18 M-3 Microsporum gypseum 22 M-4 Scopulariopsis species 26 M-5 Sporothrix schenckii species complex 30 Yeast Descriptions 34 Y-1 Cryptococcus uniguttulatus 34 Y-2 Saccharomyces cerevisiae 37 Y-3 Candida dubliniensis 40 Y-4 Candida lipolytica 43 Y-5 Cryptococcus laurentii 46 Direct Detection - Cryptococcal Antigen 49 Antifungal Susceptibility Testing - Yeast 52 Antifungal Susceptibility Testing - Mold (Educational) 54 1 Mycology Laboratory Mycology Laboratory at the Wadsworth Center, New York State Department of Health (NYSDOH) is a reference diagnostic laboratory for the fungal diseases. The laboratory services include testing for the dimorphic pathogenic fungi, unusual molds and yeasts pathogens, antifungal susceptibility testing including tests with research protocols, molecular tests including rapid identification and strain typing, outbreak and pseudo-outbreak investigations, laboratory contamination and accident investigations and related environmental surveys. The Fungal Culture Collection of the Mycology Laboratory is an important resource for high quality cultures used in the proficiency-testing program and for the in-house development and standardization of new diagnostic tests. Mycology Proficiency Testing Program provides technical expertise to NYSDOH Clinical Laboratory Evaluation Program (CLEP). The program is responsible for conducting the Clinical Laboratory Improvement Amendments (CLIA)-compliant Proficiency Testing (Mycology) for clinical laboratories in New York State. All analytes for these test events are prepared and standardized internally. -
Research Article Random Mutagenesis of the Aspergillus Oryzae Genome Results in Fungal Antibacterial Activity
Hindawi Publishing Corporation International Journal of Microbiology Volume 2013, Article ID 901697, 5 pages http://dx.doi.org/10.1155/2013/901697 Research Article Random Mutagenesis of the Aspergillus oryzae Genome Results in Fungal Antibacterial Activity Cory A. Leonard,1 Stacy D. Brown,2 and J. Russell Hayman1 1 Department of Biomedical Sciences, James H. Quillen College of Medicine, East Tennessee State University, P.O. Box 70577, Johnson City, TN 37614, USA 2 Department of Pharmaceutical Sciences, Bill Gatton College of Pharmacy, East Tennessee State University, P.O. Box 70436, Johnson City, TN 37614, USA Correspondence should be addressed to J. Russell Hayman; [email protected] Received 30 April 2013; Revised 9 July 2013; Accepted 9 July 2013 Academic Editor: Joseph Falkinham Copyright © 2013 Cory A. Leonard et al. This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. Multidrug-resistant bacteria cause severe infections in hospitals and communities. Development of new drugs to combat resistant microorganisms is needed. Natural products of microbial origin are the source of most currently available antibiotics. We hypothesized that random mutagenesis of Aspergillus oryzae would result in secretion of antibacterial compounds. To address this hypothesis, we developed a screen to identify individual A. oryzae mutants that inhibit the growth of Methicillin- resistant Staphylococcus aureus (MRSA) in vitro. To randomly generate A. oryzae mutant strains, spores were treated with ethyl methanesulfonate (EMS). Over 3000 EMS-treated A. oryzae cultures were tested in the screen, and one isolate, CAL220, exhibited altered morphology and antibacterial activity. -
What If Esca Disease of Grapevine Were Not a Fungal Disease?
Fungal Diversity (2012) 54:51–67 DOI 10.1007/s13225-012-0171-z What if esca disease of grapevine were not a fungal disease? Valérie Hofstetter & Bart Buyck & Daniel Croll & Olivier Viret & Arnaud Couloux & Katia Gindro Received: 20 March 2012 /Accepted: 1 April 2012 /Published online: 24 April 2012 # The Author(s) 2012. This article is published with open access at Springerlink.com Abstract Esca disease, which attacks the wood of grape- healthy and diseased adult plants and presumed esca patho- vine, has become increasingly devastating during the past gens were widespread and occurred in similar frequencies in three decades and represents today a major concern in all both plant types. Pioneer esca-associated fungi are not trans- wine-producing countries. This disease is attributed to a mitted from adult to nursery plants through the grafting group of systematically diverse fungi that are considered process. Consequently the presumed esca-associated fungal to be latent pathogens, however, this has not been conclu- pathogens are most likely saprobes decaying already senes- sively established. This study presents the first in-depth cent or dead wood resulting from intensive pruning, frost or comparison between the mycota of healthy and diseased other mecanical injuries as grafting. The cause of esca plants taken from the same vineyard to determine which disease therefore remains elusive and requires well execu- fungi become invasive when foliar symptoms of esca ap- tive scientific study. These results question the assumed pear. An unprecedented high fungal diversity, 158 species, pathogenicity of fungi in other diseases of plants or animals is here reported exclusively from grapevine wood in a single where identical mycota are retrieved from both diseased and Swiss vineyard plot. -
Isolation of Allergic Fungal Microflora from the Aero-Spora of Khammam District, India
Int.J.Curr.Microbiol.App.Sci (2016) 5(12): 486-492 International Journal of Current Microbiology and Applied Sciences ISSN: 2319-7706 Volume 5 Number 12 (2016) pp. 486-492 Journal homepage: http://www.ijcmas.com Original Research Article http://dx.doi.org/10.20546/ijcmas.2016.512.052 Isolation of Allergic Fungal Microflora from the Aero-Spora of Khammam District, India D. Saikumari* and Neeti Saxena Mycology and Plant Pathology Lab, Department of Botany, University College For women, Koti, Osmania University, Hyderabad, India *Corresponding author ABSTRACT K e yw or ds Allergies like Asthma, contact urticarial, bronchial problems, skin problems, hay fever, and common allergies are caused by fungal spores. Allergic proteins present Fungal spores, in the fungal spores are responsible for the cause of these allergies. Isolation of fungi Allergens, was done by exposed culture plates from three selected areas viz vegetable market Aerospora , area, surrounding area of factories and Government school of Pandurangapuram Human diseases, Khammam district. village, Khammam district, Telangana, India. Isolation was done from three different areas in order to study the variation in the fungal succession. Altogether 76 species32 genera were isolated from these areas. Aspergillus, Alternaria, Pencillium, Article Info Rhizopus, Mucor, Fusarium were commonly isolated. The present study infer/ Accepted: 18 November 2016 showed that maximum fungal spores which are saprophytic, pathogenic and Available Online: toxigenic were isolated from the market area. Wood rotting fungi were isolated from 10 December 2016 the industrial area. Introduction Allergy is one form of human disease which Pasanen et al., 1992; Katz et al., 1999). effects about 20% of human population Fungi are ubiquitous air borne allergens (Sathavahan et al., 2011)). -
Characterization of Indoor Molds with Allergenic Potential After Cryopreservation at -20°C for One Year
American Journal of Innovative Research and Applied Sciences. ISSN 2429-5396 I www.american-jiras.com ORIGINAL ARTICLE CHARACTERIZATION OF INDOOR MOLDS WITH ALLERGENIC POTENTIAL AFTER CRYOPRESERVATION AT -20°C FOR ONE YEAR | M’boh Epi Reine Elisabeth N'gou 1,2 | Chiaye Claire Antoinette Yapo-Crezoit 2 | Ama Valérie Bonouman 2 | Diane Kouao 2 | Toure offianan 2 | and | Allico Joseph Djaman 1,2 | 1. Félix Houphouët Boigny University | Laboratory of biology and health | 2. Pasteur Institute of Côte d'Ivoire | Unity of Mycology | Unit of Immunology | Unit of biological Ressources | | Received November 22, 2020 | | Accepted December 07, 2020 | | Published December 14, 2020 | | ID Article| M’boh–Ref3-ajira221120| ABSTRACT Background: The cryopreservation for long period of mold strains of medical interest essential for research is complex. Our objective is to evaluate the impact of conservation with 10% of Glycerol and Brain Heart Infusion (BHI Broth) on the survival of molds of medical interest at -20°C. Methodology: This is an analytical study of the cultural and morphological characteristics of 1310 mold strains isolated from environmental samples (air, surface and dust) collected from all azimuths and preserved in 10% Glycerol and BHI Broth at -20°C for one year. Results: Among the 1310 isolated strains and revived, colony growth was observed in 1059 strains (80.84%) against 251 (19.16%) which showed no signs of development and 119 strains (9.08%) were contaminated by other mold species or yeasts. Fungal viable strains observed after cryopreservation are: Aspergillus fumigatus, Aspergillus flavus, Aspergillus versicolor, Aspergillus niger, Aspergillus terreus, Aspergillus ochraceus, Aspergillus clavatus, Aspergillus sp, Penicillium sp, Fusarium solani, Fusarium sp, Curvularia sp, Mucor sp, Rhizomucor sp, and Trichoderma sp. -
Taxonomic Revision of Aspergillus Section Clavati Based on Molecular, Morphological and Physiological Data
available online at www.studiesinmycology.org STUDIE S IN MYCOLOGY 59: 89–106. 2007. doi:10.3114/sim.2007.59.11 Taxonomic revision of Aspergillus section Clavati based on molecular, morphological and physiological data J. Varga1,3, M. Due2, J.C. Frisvad2 and R.A. Samson1 1CBS Fungal Biodiversity Centre, Uppsalalaan 8, NL-3584 CT Utrecht, The Netherlands; 2BioCentrum-DTU, Building 221, Technical University of Denmark, DK-2800 Kgs. Lyngby, Denmark; 3Department of Microbiology, Faculty of Science and Informatics, University of Szeged, H-6701 Szeged, P.O. Box 533, Hungary *Correspondence: János Varga, [email protected] Abstract: Aspergillus section Clavati has been revised using morphology, secondary metabolites, physiological characters and DNA sequences. Phylogenetic analysis of β-tubulin, ITS and calmodulin sequence data indicated that Aspergillus section Clavati includes 6 species, A. clavatus (synonyms: A. apicalis, A. pallidus), A. giganteus, A. rhizopodus, A. longivesica, Neocarpenteles acanthosporus and A. clavatonanicus. Neocarpenteles acanthosporus is the only known teleomorph of this section. The sister genera to Neocarpenteles are Neosartorya and Dichotomomyces based on sequence data. Species in Neosartorya and Neocarpenteles have anamorphs with green conidia and share the production of tryptoquivalins, while Dichotomomyces was found to be able to produce gliotoxin, which is also produced by some Neosartorya species, and tryptoquivalines and tryptoquivalones produced by members of both section Clavati and Fumigati. All species in section Clavati are alkalitolerant and acidotolerant and they all have clavate conidial heads. Many species are coprophilic and produce the effective antibiotic patulin. Members of section Clavati also produce antafumicin, tryptoquivalines, cytochalasins, sarcins, dehydrocarolic acid and kotanins (orlandin, desmethylkotanin and kotanin) in species specific combinations. -
Antibacterial and Antifungal Activities of Spices
International Journal of Molecular Sciences Review Antibacterial and Antifungal Activities of Spices Qing Liu 1, Xiao Meng 1, Ya Li 1, Cai-Ning Zhao 1, Guo-Yi Tang 1 and Hua-Bin Li 1,2,* 1 Guangdong Provincial Key Laboratory of Food, Nutrition and Health, Department of Nutrition, School of Public Health, Sun Yat-sen University, Guangzhou 510080, China; [email protected] (Q.L.); [email protected] (X.M.); [email protected] (Y.L.); [email protected] (C.-N.Z.); [email protected] (G.-Y.T.) 2 South China Sea Bioresource Exploitation and Utilization Collaborative Innovation Center, Sun Yat-sen University, Guangzhou 510006, China * Correspondence: [email protected]; Tel.: +86-20-8733-2391 Received: 16 May 2017; Accepted: 11 June 2017; Published: 16 June 2017 Abstract: Infectious diseases caused by pathogens and food poisoning caused by spoilage microorganisms are threatening human health all over the world. The efficacies of some antimicrobial agents, which are currently used to extend shelf-life and increase the safety of food products in food industry and to inhibit disease-causing microorganisms in medicine, have been weakened by microbial resistance. Therefore, new antimicrobial agents that could overcome this resistance need to be discovered. Many spices—such as clove, oregano, thyme, cinnamon, and cumin—possessed significant antibacterial and antifungal activities against food spoilage bacteria like Bacillus subtilis and Pseudomonas fluorescens, pathogens like Staphylococcus aureus and Vibrio parahaemolyticus, harmful fungi like Aspergillus flavus, even antibiotic resistant microorganisms such as methicillin resistant Staphylococcus aureus. Therefore, spices have a great potential to be developed as new and safe antimicrobial agents. -
An Overview of the Systematics of the Sordariomycetes Based on a Four-Gene Phylogeny
Mycologia, 98(6), 2006, pp. 1076–1087. # 2006 by The Mycological Society of America, Lawrence, KS 66044-8897 An overview of the systematics of the Sordariomycetes based on a four-gene phylogeny Ning Zhang of 16 in the Sordariomycetes was investigated based Department of Plant Pathology, NYSAES, Cornell on four nuclear loci (nSSU and nLSU rDNA, TEF and University, Geneva, New York 14456 RPB2), using three species of the Leotiomycetes as Lisa A. Castlebury outgroups. Three subclasses (i.e. Hypocreomycetidae, Systematic Botany & Mycology Laboratory, USDA-ARS, Sordariomycetidae and Xylariomycetidae) currently Beltsville, Maryland 20705 recognized in the classification are well supported with the placement of the Lulworthiales in either Andrew N. Miller a basal group of the Sordariomycetes or a sister group Center for Biodiversity, Illinois Natural History Survey, of the Hypocreomycetidae. Except for the Micro- Champaign, Illinois 61820 ascales, our results recognize most of the orders as Sabine M. Huhndorf monophyletic groups. Melanospora species form Department of Botany, The Field Museum of Natural a clade outside of the Hypocreales and are recognized History, Chicago, Illinois 60605 as a distinct order in the Hypocreomycetidae. Conrad L. Schoch Glomerellaceae is excluded from the Phyllachorales Department of Botany and Plant Pathology, Oregon and placed in Hypocreomycetidae incertae sedis. In State University, Corvallis, Oregon 97331 the Sordariomycetidae, the Sordariales is a strongly supported clade and occurs within a well supported Keith A. Seifert clade containing the Boliniales and Chaetosphaer- Biodiversity (Mycology and Botany), Agriculture and iales. Aspects of morphology, ecology and evolution Agri-Food Canada, Ottawa, Ontario, K1A 0C6 Canada are discussed. Amy Y. -
Identification and Antifungal Activity of Compounds from the Mangrove
marine drugs Article Identification and Antifungal Activity of Compounds from the Mangrove Endophytic Fungus Aspergillus clavatus R7 Wensheng Li 1, Ping Xiong 1, Wenxu Zheng 1, Xinwei Zhu 1, Zhigang She 2, Weijia Ding 1,* and Chunyuan Li 1,* 1 College of Materials and Energy, South China Agricultural University, Guangzhou 510642, China; [email protected] (W.L.); [email protected] (P.X.); [email protected] (W.Z.); [email protected] (X.Z.) 2 School of Chemistry and Chemical Engineering, Sun Yat-Sen University, Guangzhou 510275, China; [email protected] * Correspondence: [email protected] (W.D.); [email protected] (C.L.); Tel.: +86-20-85280319 (C.L.) Received: 17 July 2017; Accepted: 17 August 2017; Published: 19 August 2017 Abstract: Two new coumarin derivatives, 4,40-dimethoxy-5,50-dimethyl-7,70-oxydicoumarin (1), 7-(γ,γ-dimethylallyloxy)-5-methoxy-4-methylcoumarin (2), a new chromone derivative, (S)-5-hydroxy-2,6-dimethyl-4H-furo[3,4-g]benzopyran-4,8(6H)-dione (5), and a new sterone derivative, 24-hydroxylergosta-4,6,8(14),22-tetraen-3-one (6), along with two known bicoumarins, kotanin (3) and orlandin (4), were isolated from an endophytic fungus Aspergillus clavatus (collection No. R7), isolated from the root of Myoporum bontioides collected from Leizhou Peninsula, China. Their structures were elucidated using 1D- and 2D- NMR spectroscopy, and HRESIMS. The absolute configuration of compound 5 was determined by comparison of the experimental and calculated electronic circular dichroism (ECD) spectra. Compound 6 significantly inhibited the plant pathogenic fungi Fusarium oxysporum, Colletotrichum musae and Penicillium italicum, compound 5 significantly inhibited Colletotrichum musae, and compounds 1, 3 and 4 greatly inhibited Fusarium oxysporum, showing the antifungal activities higher than those of the positive control, triadimefon.