Isolation and Characterization of Human Repetin, a Member of the Fused Gene Family of the Epidermal Differentiation Complex
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Molecular and Physiological Basis for Hair Loss in Near Naked Hairless and Oak Ridge Rhino-Like Mouse Models: Tracking the Role of the Hairless Gene
University of Tennessee, Knoxville TRACE: Tennessee Research and Creative Exchange Doctoral Dissertations Graduate School 5-2006 Molecular and Physiological Basis for Hair Loss in Near Naked Hairless and Oak Ridge Rhino-like Mouse Models: Tracking the Role of the Hairless Gene Yutao Liu University of Tennessee - Knoxville Follow this and additional works at: https://trace.tennessee.edu/utk_graddiss Part of the Life Sciences Commons Recommended Citation Liu, Yutao, "Molecular and Physiological Basis for Hair Loss in Near Naked Hairless and Oak Ridge Rhino- like Mouse Models: Tracking the Role of the Hairless Gene. " PhD diss., University of Tennessee, 2006. https://trace.tennessee.edu/utk_graddiss/1824 This Dissertation is brought to you for free and open access by the Graduate School at TRACE: Tennessee Research and Creative Exchange. It has been accepted for inclusion in Doctoral Dissertations by an authorized administrator of TRACE: Tennessee Research and Creative Exchange. For more information, please contact [email protected]. To the Graduate Council: I am submitting herewith a dissertation written by Yutao Liu entitled "Molecular and Physiological Basis for Hair Loss in Near Naked Hairless and Oak Ridge Rhino-like Mouse Models: Tracking the Role of the Hairless Gene." I have examined the final electronic copy of this dissertation for form and content and recommend that it be accepted in partial fulfillment of the requirements for the degree of Doctor of Philosophy, with a major in Life Sciences. Brynn H. Voy, Major Professor We have read this dissertation and recommend its acceptance: Naima Moustaid-Moussa, Yisong Wang, Rogert Hettich Accepted for the Council: Carolyn R. -
Loss-Of-Function Mutations in the Gene Encoding Filaggrin Cause Ichthyosis
LETTERS Loss-of-function mutations in the gene encoding filaggrin cause ichthyosis vulgaris Frances J D Smith1, Alan D Irvine2, Ana Terron-Kwiatkowski1, Aileen Sandilands1, Linda E Campbell1, Yiwei Zhao1, Haihui Liao1, Alan T Evans3, David R Goudie4, Sue Lewis-Jones5, Gehan Arseculeratne5, Colin S Munro6, Ann Sergeant6, Gra´inne O’Regan2, Sherri J Bale7, John G Compton7, John J DiGiovanna8,9, Richard B Presland10,11, Philip Fleckman11 & W H Irwin McLean1 Ichthyosis vulgaris (OMIM 146700) is the most common composed of the 400-kDa protein profilaggrin. Following a short, inherited disorder of keratinization and one of the most unique N-terminal domain, most of the profilaggrin molecule consists frequent single-gene disorders in humans. The most widely of 10–12 repeats of the 324-residue filaggrin sequence6. Upon terminal cited incidence figure is 1 in 250 based on a survey of differentiation of granular cells, profilaggrin is proteolytically cleaved 1 B http://www.nature.com/naturegenetics 6,051 healthy English schoolchildren . We have identified into 37-kDa filaggrin peptides and the N-terminal domain contain- homozygous or compound heterozygous mutations R501X and ing an S100-like calcium binding domain. Filaggrin rapidly aggregates 2282del4 in the gene encoding filaggrin (FLG) as the cause of the keratin cytoskeleton, causing collapse of the granular cells into moderate or severe ichthyosis vulgaris in 15 kindreds. In flattened anuclear squames. This condensed cytoskeleton is cross- addition, these mutations are semidominant; heterozygotes linked by transglutaminases during formation of the cornified cell show a very mild phenotype with incomplete penetrance. envelope (CCE). The CCE is the outermost barrier layer of the skin The mutations show a combined allele frequency of B4% which not only prevents water loss but also impedes the entry of in populations of European ancestry, explaining the high allergens and infectious agents7. -
An Abridged Compendium of Words. a Discussion of Them and Opinions About Them
DERMATOLOGY PRACTICAL & CONCEPTUAL www.derm101.com Dermatopathology: An abridged compendium of words. A discussion of them and opinions about them. Part 6 (I-L) Bruce J. Hookerman1 1 Dermatology Specialists, Bridgeton, Missouri, USA Citation: Hookerman BJ. Dermatopathology: An abridged compendium of words. A discussion of them and opinions about them. Part 6 (I-L). Dermatol Pract Concept. 2014;4(4):1. http://dx.doi.org/10.5826/dpc.0404a01 Copyright: ©2014 Hookerman. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Corresponding author: Bruce J. Hookerman, M.D., 12105 Bridgeton Square Drive, St. Louis, MO 63044, USA. Email: [email protected] – I – term “id reaction” only for a spongiotic dermatitis manifested by tiny vesicles on the hands of patients with florid dermato- ICHTHYOSIS: a generic term for skin conditions character- phytosis at another site, usually the feet, or for an analogue ized by what are said to be fishlike scales, i.e., scales that are of that phenomenon such as widespread vesicles that appear broad and polygonal with free edges, as are seen in ichthyosis subsequent to injudicious treatment, i.e., with Gentian violet vulgaris (and its look-alike, acquired ichthyosis), X-linked (known sardonically in times past as “Gentian violent”) of ichthyosis, and lamellar ichthyosis. Conditions reputed to be an exuberant spongiotic dermatitis, usually on the feet, such ichthyosis, such as ichthyosis hystrix and ichthyosis linearis as an allergic contact dermatitis. A time-honored explana- circumflexa, do not qualify because they are not associated tion for an “id” reaction is hematogenous dissemination of with broad polygonal scales. -
Deimination, Intermediate Filaments and Associated Proteins
International Journal of Molecular Sciences Review Deimination, Intermediate Filaments and Associated Proteins Julie Briot, Michel Simon and Marie-Claire Méchin * UDEAR, Institut National de la Santé Et de la Recherche Médicale, Université Toulouse III Paul Sabatier, Université Fédérale de Toulouse Midi-Pyrénées, U1056, 31059 Toulouse, France; [email protected] (J.B.); [email protected] (M.S.) * Correspondence: [email protected]; Tel.: +33-5-6115-8425 Received: 27 October 2020; Accepted: 16 November 2020; Published: 19 November 2020 Abstract: Deimination (or citrullination) is a post-translational modification catalyzed by a calcium-dependent enzyme family of five peptidylarginine deiminases (PADs). Deimination is involved in physiological processes (cell differentiation, embryogenesis, innate and adaptive immunity, etc.) and in autoimmune diseases (rheumatoid arthritis, multiple sclerosis and lupus), cancers and neurodegenerative diseases. Intermediate filaments (IF) and associated proteins (IFAP) are major substrates of PADs. Here, we focus on the effects of deimination on the polymerization and solubility properties of IF proteins and on the proteolysis and cross-linking of IFAP, to finally expose some features of interest and some limitations of citrullinomes. Keywords: citrullination; post-translational modification; cytoskeleton; keratin; filaggrin; peptidylarginine deiminase 1. Introduction Intermediate filaments (IF) constitute a unique macromolecular structure with a diameter (10 nm) intermediate between those of actin microfilaments (6 nm) and microtubules (25 nm). In humans, IF are found in all cell types and organize themselves into a complex network. They play an important role in the morphology of a cell (including the nucleus), are essential to its plasticity, its mobility, its adhesion and thus to its function. -
Identification of Trichoplein, a Novel Keratin Filament- Binding Protein
Research Article 1081 Identification of trichoplein, a novel keratin filament- binding protein Miwako Nishizawa1,*, Ichiro Izawa1,*, Akihito Inoko1,*, Yuko Hayashi1, Koh-ichi Nagata1, Tomoya Yokoyama1,2, Jiro Usukura3 and Masaki Inagaki1,‡ 1Division of Biochemistry, Aichi Cancer Center Research Institute, 1-1 Kanokoden, Chikusa-ku, Nagoya 464-8681, Japan 2Department of Dermatology, Mie University Faculty of Medicine, 2-174 Edobashi, Tsu 514-8507, Japan 3Department of Anatomy and Cell Biology, Nagoya University School of Medicine, 65 Tsurumai, Showa-ku, Nagoya 466-8550, Japan *These authors contributed equally to this work ‡Author for correspondence (e-mail: [email protected]) Accepted 29 November 2004 Journal of Cell Science 118, 1081-1090 Published by The Company of Biologists 2005 doi:10.1242/jcs.01667 Summary Keratins 8 and 18 (K8/18) are major components of the antibody in a complex with K8/18 and immunostaining intermediate filaments (IFs) of simple epithelia. We report revealed that trichoplein colocalized with K8/18 filaments here the identification of a novel protein termed in HeLa cells. In polarized Caco-2 cells, trichoplein trichoplein. This protein shows a low degree of sequence colocalized not only with K8/18 filaments in the apical similarity to trichohyalin, plectin and myosin heavy chain, region but also with desmoplakin, a constituent of and is a K8/18-binding protein. Among interactions desmosomes. In the absorptive cells of the small intestine, between trichoplein and various IF proteins that we trichoplein colocalized with K8/18 filaments at the apical tested using two-hybrid methods, trichoplein interacted cortical region, and was also concentrated at desmosomes. -
Probing the S100 Protein Family Through Genomic and Functional Analysis$
Genomics 84 (2004) 10–22 www.elsevier.com/locate/ygeno Probing the S100 protein family through genomic and functional analysis$ Timothy Ravasi,a,b,* Kenneth Hsu,c Jesse Goyette,c Kate Schroder,a Zheng Yang,c Farid Rahimi,c Les P. Miranda,b,1 Paul F. Alewood,b David A. Hume,a,b and Carolyn Geczyc a SRC for Functional and Applied Genomics, CRC for Chronic Inflammatory Diseases, University of Queensland, Brisbane 4072, QLD, Australia b Institute for Molecular Bioscience, University of Queensland, Brisbane 4072, QLD, Australia c Cytokine Research Unit, School of Medical Sciences, University of New South Wales, Sydney 2052, NSW, Australia Received 25 November 2003; accepted 2 February 2004 Available online 10 May 2004 Abstract The EF-hand superfamily of calcium binding proteins includes the S100, calcium binding protein, and troponin subfamilies. This study represents a genome, structure, and expression analysis of the S100 protein family, in mouse, human, and rat. We confirm the high level of conservation between mammalian sequences but show that four members, including S100A12, are present only in the human genome. We describe three new members of the S100 family in the three species and their locations within the S100 genomic clusters and propose a revised nomenclature and phylogenetic relationship between members of the EF-hand superfamily. Two of the three new genes were induced in bone-marrow-derived macrophages activated with bacterial lipopolysaccharide, suggesting a role in inflammation. Normal human and murine tissue distribution profiles indicate that some members of the family are expressed in a specific manner, whereas others are more ubiquitous. -
Keratinization and Its Disorders
Oman Medical Journal (2012) Vol. 27, No. 5: 348-357 DOI 10. 5001/omj.2012.90 Review Article Keratinization and its Disorders Shibani Shetty, Gokul S. Received: 03 May 2012 / Accepted: 08 July 2012 © OMSB, 2012 Abstract Keratins are a diverse group of structural proteins that form the epithelium (buccal mucosa, labial mucosa) and specialized intermediate filament network responsible for maintaining the mucosa (dorsal surface of the tongue).2 An important aspect structural integrity of keratinocytes. In humans, there are around of stratified squamous epithelia is that the cells undergo a 30 keratin families divided into two groups, namely, acidic and terminal differentiation program that results in the formation basic keratins, which are arranged in pairs. They are expressed in of a mechanically resistant and toughened surface composed of a highly specific pattern related to the epithelial type and stage of cornified cells that are filled with keratin filaments and lack nuclei cellular differentiation. A total of 54 functional genes exist which and cytoplasmic organelles. In these squames, the cell membrane codes for these keratin families. The expression of specific keratin is replaced by a proteinaceous cornified envelope that is covalently genes is regulated by the differentiation of epithelial cells within cross linked to the keratin filaments, providing a highly insoluble the stratifying squamous epithelium. Mutations in most of these yet flexible structure that protects the underlying epithelial cells.1 genes are now associated with specific tissue fragility disorders Keratinization, also termed as cornification, is a process which may manifest both in skin and mucosa depending on the of cytodifferentiation which the keratinocytes undergo when expression pattern. -
Analysis of Two Human Gene Clusters Involved in Innate Immunity
Analysis of Two Human Gene Clusters Involved in Innate Immunity Dissertation zur Erlangung des Doktorgrades der Mathematisch-Naturwissenschaftlichen Fakultät der Christian-Albrechts-Universität zu Kiel vorgelegt von Zhihong Wu Kiel Mai 2005 Referent: Prof. Dr. rer. nat., Dr. h. c. Thomas C. G. Bosch Korreferent: Prof. Dr. rer. nat. Jens-Michael Schröder Tag der mündlichen Prüfung: 2005-12-08 Zum Druck genehmigt: Kiel, den 2005-12-21 ------------------------------- Der Dekan Contents List of Abbreviations . .. .. i 1 Introduction 1 1.1 Chemical antibiotics: an unsolved and growing problem .. .. .1 1.2 The importance of the innate immune response in living organisms . .. .2 1.3 Antimicrobial peptides (AMPs) . .3 1.3.1 Discovery of AMPs . 4 1.3.2 Classification of AMPs. .4 1.3.3 The importance of AMPs in human skin. .6 1.4 The barrier function of human skin . 7 1.4.1 The cornified cell envelope (CCE) . .8 1.4.2 The epidermal differentiation complex (EDC) . .9 1.4.3 The functions of the SFTP family members . .. 10 1.5 Two emerging novel families of AMPs . ... .12 1.6 Objective of this study . .14 2 Materials and Methods 16 2.1 Patients . 16 2.2 Materials . .. 17 2.3 Tissues and RNA preparation . .. 18 2.4 Cell Culture . 18 2.5 Conventional RT-PCR . .. 19 2.6 Real-time RT-PCR . 20 2.7 In-silico cloning of the novel human SFTP and SPINK genes . 21 2.8 5’ and 3’ Rapid Amplification of cDNA Ends (RACE) . 23 2.9 Long-distance PCR and the short-range PCR-walking strategy . -
Trichohyalin-Like 1 Protein Plays a Crucial Role in Proliferation and Anti
Makino et al. Cell Death Discovery (2020) 6:109 https://doi.org/10.1038/s41420-020-00344-5 Cell Death Discovery ARTICLE Open Access Trichohyalin-like 1 protein plays a crucial role in proliferation and anti-apoptosis of normal human keratinocytes and squamous cell carcinoma cells Teruhiko Makino 1,MegumiMizawa1, Yoko Yoshihisa1, Seiji Yamamoto2, Yoshiaki Tabuchi 3, Masashi Miyai4, Toshihiko Hibino4, Masakiyo Sasahara2 and Tadamichi Shimizu1 Abstract Epidermal differentiation is a complex process that requires the regulated and sequential expression of various genes. Most fused-type S100 proteins are expressed in the granular layer and it is hypothesized that these proteins may be associated with cornification and barrier formation. We previously identified a member of the fused-type S100 proteins, Trichohyalin-like 1 (TCHHL1) protein. TCHHL1 is distributed in the basal layer of the normal epidermis. Furthermore, the expression is markedly increased in cancerous/non-cancerous skin samples with the hyperproliferation of keratinocytes. We herein examined the role of TCHHL1 in normal human keratinocytes (NHKs) and squamous cell carcinoma (SCC). The knockdown of TCHHL1 by transfection with TCHHL1 siRNA significantly inhibited proliferation and induced the early apoptosis of NHKs. In TCHHL1-knockdown NHKs, the level of extracellular signal-regulated kinase 1/2 (ERK1/2) phosphorylation was markedly decreased. In addition, the slight inhibition of v-akt murine thymoma viral oncogene homolog (AKT) phosphorylation and upregulation of forkhead box-containing protein O1(FOXO1), B-cell lymphoma2 (BCL2) and Bcl2-like protein 11 (BCL2L11) was observed. Skin-equivalent models fi 1234567890():,; 1234567890():,; 1234567890():,; 1234567890():,; built by TCHHL1-knockdown NHKs showed a markedly hypoplastic epidermis. -
Genetics and Epigenetics of Atopic Dermatitis: an Updated Systematic Review
G C A T T A C G G C A T genes Review Genetics and Epigenetics of Atopic Dermatitis: An Updated Systematic Review 1,2, 1,2,3, 1,2,3, Maria J Martin y, Miguel Estravís y , Asunción García-Sánchez * , Ignacio Dávila 1,2,4 , María Isidoro-García 1,2,5,6 and Catalina Sanz 1,2,7 1 Institute for Biomedical Research of Salamanca (IBSAL), 37007 Salamanca, Spain; [email protected] (M.J.M.); [email protected] (M.E.); [email protected] (I.D.); [email protected] (M.I-G.); [email protected] (C.S.) 2 Network for Cooperative Research in Health–RETICS ARADyAL, 37007 Salamanca, Spain 3 Department of Biomedical and Diagnostics Sciences, University of Salamanca, 37007 Salamanca, Spain 4 Department of Immunoallergy, Salamanca University Hospital, 37007 Salamanca, Spain 5 Department of Clinical Biochemistry, University Hospital of Salamanca, 37007 Salamanca, Spain 6 Department of Medicine, University of Salamanca, 37007 Salamanca, Spain 7 Department of Microbiology and Genetics, University of Salamanca, 37007 Salamanca, Spain * Correspondence: [email protected]; Tel.: +3-492-329-1100 These authors equally contribute to the manuscript. y Received: 12 March 2020; Accepted: 15 April 2020; Published: 18 April 2020 Abstract: Background: Atopic dermatitis is a common inflammatory skin disorder that affects up to 15–20% of the population and is characterized by recurrent eczematous lesions with intense itching. As a heterogeneous disease, multiple factors have been suggested to explain the nature of atopic dermatitis (AD), and its high prevalence makes it necessary to periodically compile and update the new information available. In this systematic review, the focus is set at the genetic and epigenetic studies carried out in the last years. -
Shadow Cell Basal Cell Carcinoma with Acantholysis
Shadow Cell Basal Cell Carcinoma With Acantholysis John Kwittken, MD I present histologic documentation of a unique infundibula in association with suprabasilar clefts basal cell carcinoma (BCC) in which shadow containing dyskeratotic acantholytic cells. cells formed the major cellular component along Clear spaces that ranged from small circular with extensive acantholysis and the development zones to clefts of variable length were randomly of ringed shadow cells. This neoplasm contained scattered throughout the neoplasm. A relatively trichohyalin granules, which are indisputable small number of these spaces, primarily linear, did evidence of follicular differentiation. Shadow not possess an epithelial cell lining and undoubt- cells rarely are encountered within BCCs and edly represented stromal retraction artifact. The generally form relatively small components. Such majority of spaces were either completely or par- neoplasms have been labeled BCC with matrical tially lined by a single layer of palisaded basaloid differentiation. Because of nonspecificity and cells (Figure 1). The small circular zones appeared ambiguity, I propose that this terminology be adenoid or glandular. Many of these spaces con- abandoned and replaced by shadow cell BCC. tained clusters of acantholytic and focally dysker- atotic basaloid cells and rounded shadow cells hadow cells rarely are encountered within basal (Figure 2). The cytoplasms of many of these cell carcinomas (BCCs).1,2 When present, shadow cells were filled with concentric lamina- Sshadow cells comprise relatively small portions tions of keratin. Basaloid cells with crescent- of the neoplasm. Such neoplasms have been labeled shaped nuclei were attached to and either partially BCC with matrical differentiation. My purpose is to or totally encircled by many of the shadow cells report a unique case of a BCC in which not only did that I labeled ringed shadow cells (Figure 3). -
Zimmer Cell Calcium 2013 Mammalian S100 Evolution.Pdf
Cell Calcium 53 (2013) 170–179 Contents lists available at SciVerse ScienceDirect Cell Calcium jo urnal homepage: www.elsevier.com/locate/ceca Evolution of the S100 family of calcium sensor proteins a,∗ b b,1 b Danna B. Zimmer , Jeannine O. Eubanks , Dhivya Ramakrishnan , Michael F. Criscitiello a Center for Biomolecular Therapeutics and Department of Biochemistry & Molecular Biology, University of Maryland School of Medicine, 108 North Greene Street, Baltimore, MD 20102, United States b Comparative Immunogenetics Laboratory, Department of Veterinary Pathobiology, College of Veterinary Medicine & Biomedical Sciences, Texas A&M University, College Station, TX 77843-4467, United States a r t i c l e i n f o a b s t r a c t 2+ Article history: The S100s are a large group of Ca sensors found exclusively in vertebrates. Transcriptomic and genomic Received 4 October 2012 data from the major radiations of mammals were used to derive the evolution of the mammalian Received in revised form 1 November 2012 S100s genes. In human and mouse, S100s and S100 fused-type proteins are in a separate clade from Accepted 3 November 2012 2+ other Ca sensor proteins, indicating that an ancient bifurcation between these two gene lineages Available online 14 December 2012 has occurred. Furthermore, the five genomic loci containing S100 genes have remained largely intact during the past 165 million years since the shared ancestor of egg-laying and placental mammals. Keywords: Nonetheless, interesting births and deaths of S100 genes have occurred during mammalian evolution. Mammals The S100A7 loci exhibited the most plasticity and phylogenetic analyses clarified relationships between Phylogenetic analyses the S100A7 proteins encoded in the various mammalian genomes.