Identification of Fossil Worm Tubes from Phanerozoic Hydrothermal Vents and Cold Seeps
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Phylogenetic Relationships of Serpulidae (Annelida: Polychaeta) Based on 18S Rdna Sequence Data, and Implications for Opercular Evolution Janina Lehrkea,Ã, Harry A
ARTICLE IN PRESS Organisms, Diversity & Evolution 7 (2007) 195–206 www.elsevier.de/ode Phylogenetic relationships of Serpulidae (Annelida: Polychaeta) based on 18S rDNA sequence data, and implications for opercular evolution Janina Lehrkea,Ã, Harry A. ten Hoveb, Tara A. Macdonaldc, Thomas Bartolomaeusa, Christoph Bleidorna,1 aInstitute for Zoology, Animal Systematics and Evolution, Freie Universitaet Berlin, Koenigin-Luise-Street 1-3, 14195 Berlin, Germany bZoological Museum, University of Amsterdam, P.O. Box 94766, 1090 GT Amsterdam, The Netherlands cBamfield Marine Sciences Centre, Bamfield, British Columbia, Canada, V0R 1B0 Received 19 December 2005; accepted 2 June 2006 Abstract Phylogenetic relationships of (19) serpulid taxa (including Spirorbinae) were reconstructed based on 18S rRNA gene sequence data. Maximum likelihood, Bayesian inference, and maximum parsimony methods were used in phylogenetic reconstruction. Regardless of the method used, monophyly of Serpulidae is confirmed and four monophyletic, well- supported major clades are recovered: the Spirorbinae and three groups hitherto referred to as the Protula-, Serpula-, and Pomatoceros-group. Contrary to the taxonomic literature and the hypothesis of opercular evolution, the Protula- clade contains non-operculate (Protula, Salmacina) and operculate taxa both with pinnulate and non-pinnulate peduncle (Filograna vs. Vermiliopsis), and most likely is the sister group to Spirorbinae. Operculate Serpulinae and poorly or non-operculate Filograninae are paraphyletic. It is likely that lack of opercula in some serpulid genera is not a plesiomorphic character state, but reflects a special adaptation. r 2007 Gesellschaft fu¨r Biologische Systematik. Published by Elsevier GmbH. All rights reserved. Keywords: Serpulidae; Phylogeny; Operculum; 18S rRNA gene; Annelida; Polychaeta Introduction distinctive calcareous tubes and bilobed tentacular crowns, each with numerous radioles that bear shorter Serpulids are common members of marine hard- secondary branches (pinnules) on the inner side. -
Biomineralization of Polychaete Annelids in the Fossil Record
minerals Review Biomineralization of Polychaete Annelids in the Fossil Record Olev Vinn Department of Geology, University of Tartu, Ravila 14A, 50411 Tartu, Estonia; [email protected]; Tel.: +372-5067728 Received: 31 August 2020; Accepted: 25 September 2020; Published: 29 September 2020 Abstract: Ten distinct microstructures occur in fossil serpulids and serpulid tubes can contain several layers with different microstructures. Diversity and complexity of serpulid skeletal structures has greatly increased throughout their evolution. In general, Cenozoic serpulid skeletal structures are better preserved than Mesozoic ones. The first complex serpulid microstructures comparable to those of complex structures of molluscs appeared in the Eocene. The evolution of serpulid tube microstructures can be explained by the importance of calcareous tubes for serpulids as protection against predators and environmental disturbances. Both fossil cirratulids and sabellids are single layered and have only spherulitic prismatic tube microstructures. Microstructures of sabellids and cirratulids have not evolved since the appearance of calcareous species in the Jurassic and Oligocene, respectively. The lack of evolution in sabellids and cirratulids may result from the unimportance of biomineralization for these groups as only few species of sabellids and cirratulids have ever built calcareous tubes. Keywords: biominerals; calcite; aragonite; skeletal structures; serpulids; sabellids; cirratulids; evolution 1. Introduction Among polychaete annelids, calcareous tubes are known in serpulids, cirratulids and sabellids [1–3]. The earliest serpulids and sabellids are known from the Permian [4], and cirratulids from the Oligocene [5]. Only serpulids dwell exclusively within calcareous tubes. Polychaete annelids build their tubes from calcite, aragonite or a mixture of both polymorphs. Calcareous polychaete tubes possess a variety of ultrastructural fabrics, from simple to complex, some being unique to annelids [1]. -
Biodiversity and Trophic Ecology of Hydrothermal Vent Fauna Associated with Tubeworm Assemblages on the Juan De Fuca Ridge
Biogeosciences, 15, 2629–2647, 2018 https://doi.org/10.5194/bg-15-2629-2018 © Author(s) 2018. This work is distributed under the Creative Commons Attribution 4.0 License. Biodiversity and trophic ecology of hydrothermal vent fauna associated with tubeworm assemblages on the Juan de Fuca Ridge Yann Lelièvre1,2, Jozée Sarrazin1, Julien Marticorena1, Gauthier Schaal3, Thomas Day1, Pierre Legendre2, Stéphane Hourdez4,5, and Marjolaine Matabos1 1Ifremer, Centre de Bretagne, REM/EEP, Laboratoire Environnement Profond, 29280 Plouzané, France 2Département de sciences biologiques, Université de Montréal, C.P. 6128, succursale Centre-ville, Montréal, Québec, H3C 3J7, Canada 3Laboratoire des Sciences de l’Environnement Marin (LEMAR), UMR 6539 9 CNRS/UBO/IRD/Ifremer, BP 70, 29280, Plouzané, France 4Sorbonne Université, UMR7144, Station Biologique de Roscoff, 29680 Roscoff, France 5CNRS, UMR7144, Station Biologique de Roscoff, 29680 Roscoff, France Correspondence: Yann Lelièvre ([email protected]) Received: 3 October 2017 – Discussion started: 12 October 2017 Revised: 29 March 2018 – Accepted: 7 April 2018 – Published: 4 May 2018 Abstract. Hydrothermal vent sites along the Juan de Fuca community structuring. Vent food webs did not appear to be Ridge in the north-east Pacific host dense populations of organised through predator–prey relationships. For example, Ridgeia piscesae tubeworms that promote habitat hetero- although trophic structure complexity increased with ecolog- geneity and local diversity. A detailed description of the ical successional stages, showing a higher number of preda- biodiversity and community structure is needed to help un- tors in the last stages, the food web structure itself did not derstand the ecological processes that underlie the distribu- change across assemblages. -
A Metapopulation Model for Whale-Fall Specialists: the Largest Whales Are Essential to Prevent Species Extinctions
THE SEA: THE CURRENT AND FUTURE OCEAN Journal of Marine Research, 77, Supplement, 283–302, 2019 A metapopulation model for whale-fall specialists: The largest whales are essential to prevent species extinctions by Craig R. Smith,1,2 Joe Roman,3 and J. B. Nation4 ABSTRACT The sunken carcasses of great whales (i.e., whale falls) provide an important deep-sea habitat for more than 100 species that may be considered whale-fall specialists. Commercial whaling has reduced the abundance and size of whales, and thus whale-fall habitats, as great whales were hunted and removed from the oceans, often to near extinction. In this article, we use a metapopulation modeling approach to explore the consequences of whaling to the abundance and persistence of whale-fall habitats in the deep sea and to the potential for extinction of whale-fall specialists. Our modeling indicates that the persistence of metapopulations of whale-fall specialists is linearly related to the abundance of whales, and extremely sensitive (to the fourth power) to the mean size of whales. Thus, whaling-induced declines in the mean size of whales are likely to have been as important as declines in whale abundance to extinction pressure on whale-fall specialists. Our modeling also indicates that commercial whaling, even under proposed sustainable yield scenarios, has the potential to yield substantial extinction of whale-fall specialists. The loss of whale-fall habitat is likely to have had the greatest impact on the diversity of whale-fall specialists in areas where whales have been hunted for centuries, allowing extinctions to proceed to completion. -
The Marine Fauna of New Zealand : Spirorbinae (Polychaeta : Serpulidae)
ISSN 0083-7903, 68 (Print) ISSN 2538-1016; 68 (Online) The Marine Fauna of New Zealand : Spirorbinae (Polychaeta : Serpulidae) by PETER J. VINE ANOGlf -1,. �" ii 'i ,;.1, J . --=--� • ��b, S�• 1 • New Zealand Oceanographic Institute Memoir No. 68 1977 The Marine Fauna of New Zealand: Spirorbinae (Polychaeta: Serpulidae) This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivs 3.0 Unported License. To view a copy of this license, visit http://creativecommons.org/licenses/by-nc-nd/3.0/ Frontispiece Spirorbinae on a piece of alga washed up on the New Zealand seashore. This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivs 3.0 Unported License. To view a copy of this license, visit http://creativecommons.org/licenses/by-nc-nd/3.0/ NEW ZEALAND DEPARTMENT OF SCIENTIFIC AND INDUSTRIAL RESEARCH The Marine Fauna of New Zealand: Spirorbinae (Polychaeta: Serpulidae) by PETER J. VINE Department of Zoology, University College, Singleton Park, Swansea, Wales, UK and School of Biological Sciences, James Cook University of North Queensland, Townsville, Australia PERMANENT ADDRESS "Coe! na Mara", Faul, c/- Dr Casey, Clifden, County Galway, Ireland New Zealand Oceanographic Institute Memoir No. 68 1977 This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivs 3.0 Unported License. To view a copy of this license, visit http://creativecommons.org/licenses/by-nc-nd/3.0/ Citation according to World list of Scientific Periodicals (4th edition: Mem. N.Z. oceanogr. Inst. 68 ISSN 0083-7903 Received for publication at NZOI January 1973 Edited by T. K. Crosby, Science InformationDivision, DSIR and R. -
Spatial Variation in the Reproductive Biology of Paralvinella Palmiformis (Polychaeta: Alvinellidae) from a Vent Field on the Juan De Fuca Ridge
MARINE ECOLOGY PROGRESS SERIES Vol. 255: 171–181, 2003 Published June 24 Mar Ecol Prog Ser Spatial variation in the reproductive biology of Paralvinella palmiformis (Polychaeta: Alvinellidae) from a vent field on the Juan de Fuca Ridge Jonathan T. P. Copley1,*, Paul A. Tyler 1, Cindy L. Van Dover 2, Steven J. Philp1 1School of Ocean and Earth Science, Southampton Oceanography Centre, University of Southampton, European Way, Southampton SO14 3ZH, United Kingdom 2Biology Department, College of William & Mary, Williamsburg, Virginia 23187, USA ABSTRACT: The microdistribution and dynamics of deep-sea hydrothermal vent communities often reflect the extreme heterogeneity of their environment. Here we present an assessment of spatial variation in the reproductive development of the alvinellid polychaete Paralvinella palmiformis at the High Rise vent field (Endeavour Segment, Juan de Fuca Ridge, NE Pacific). Samples collected from different locations across the vent field suggest patchy reproductive development for this species. Males and females from several locations contained few or no developing gametes, while gametes were abundant in samples collected at the same time from other locations. Samples lacking gametes were distinguished by body size-frequency distributions with peaks at smaller sizes and the presence or absence of other fauna consistent with early stage assemblages in a successional mosaic model previously proposed for Endeavour Segment communities. Where gametes were present, synchrony of reproductive development between females within samples and between samples was evident. Reproductive synchrony between pairs of samples initially declined over a 7 d interval between sam- ples, suggesting a rapid rate of reproductive development for P. palmiformis. Samples collected 1 mo apart, however, displayed similar frequency distributions of developing gametes. -
OREGON ESTUARINE INVERTEBRATES an Illustrated Guide to the Common and Important Invertebrate Animals
OREGON ESTUARINE INVERTEBRATES An Illustrated Guide to the Common and Important Invertebrate Animals By Paul Rudy, Jr. Lynn Hay Rudy Oregon Institute of Marine Biology University of Oregon Charleston, Oregon 97420 Contract No. 79-111 Project Officer Jay F. Watson U.S. Fish and Wildlife Service 500 N.E. Multnomah Street Portland, Oregon 97232 Performed for National Coastal Ecosystems Team Office of Biological Services Fish and Wildlife Service U.S. Department of Interior Washington, D.C. 20240 Table of Contents Introduction CNIDARIA Hydrozoa Aequorea aequorea ................................................................ 6 Obelia longissima .................................................................. 8 Polyorchis penicillatus 10 Tubularia crocea ................................................................. 12 Anthozoa Anthopleura artemisia ................................. 14 Anthopleura elegantissima .................................................. 16 Haliplanella luciae .................................................................. 18 Nematostella vectensis ......................................................... 20 Metridium senile .................................................................... 22 NEMERTEA Amphiporus imparispinosus ................................................ 24 Carinoma mutabilis ................................................................ 26 Cerebratulus californiensis .................................................. 28 Lineus ruber ......................................................................... -
The First Record of the Genus Lamellibrachia (Siboglinidae
J. Earth Syst. Sci. (2021) 130:94 Ó Indian Academy of Sciences https://doi.org/10.1007/s12040-021-01587-1 (0123456789().,-volV)(0123456789().,-volV) The Brst record of the genus Lamellibrachia (Siboglinidae) tubeworm along with associated organisms in a chemosynthetic ecosystem from the Indian Ocean: A report from the Cauvery–Mannar Basin 1, 1 1 1 AMAZUMDAR *, P DEWANGAN ,APEKETI ,FIROZ BADESAAB , 1,5 1,6 1 1,6 MOHD SADIQUE ,KALYANI SIVAN ,JITTU MATHAI ,ANKITA GHOSH , 1,6 1,5 2 1,6 1 AZATALE ,SPKPILLUTLA ,CUMA ,CKMISHRA ,WALSH FERNANDES , 3 4 ASTHA TYAGI and TANOJIT PAUL 1Gas Hydrate Research Group, CSIR-National Institute of Oceanography, Dona Paula, Goa 403 004, India. 2Kerala University of Fisheries and Ocean Studies, Kochi, Kerala 682 506, India. 3K.J. Somaiya College of Science and Commerce, University of Mumbai, Mumbai, Maharashtra 400 077, India. 4Manipal Institute of Technology, Manipal, Karnataka 576 104, India. 5School of Earth, Ocean, and Atmospheric Sciences, Goa University, Taleigao Plateau, Goa 403 001, India. 6Academy of ScientiBc and Innovative Research (AcSIR), Ghaziabad, Uttar Pradesh 201 002, India. *Corresponding author. e-mail: [email protected] MS received 2 October 2020; revised 23 January 2021; accepted 25 January 2021 Here, we report for the Brst time, the genus Lamellibrachia tubeworm and associated chemosynthetic ecosystem from a cold-seep site in the Indian Ocean. The discovery of cold-seep was made oA the Cauvery–Mannar Basin onboard ORV Sindhu Sadhana (SSD-070; 13th to 22nd February 2020). The chemosymbiont bearing polychaete worm is also associated with squat lobsters (Munidposis sp.) and Gastropoda belonging to the family Buccinidae. -
Filogranula Cincta (Goldfuss, 1831), a Serpulid Worm (Polychaeta, Sedentaria, Serpulidae) from the Bohemian Cretaceous Basin
SBORNÍK NÁRODNÍHO MUZEA V PRAZE ACTA MUSEI NATIONALIS PRAGAE Řada B – Přírodní vědy • sv. 71 • 2015 • čís. 3–4 • s. 293–300 Series B – Historia Naturalis • vol. 71 • 2015 • no. 3–4 • pp. 293–300 FILOGRANULA CINCTA (GOLDFUSS, 1831), A SERPULID WORM (POLYCHAETA, SEDENTARIA, SERPULIDAE) FROM THE BOHEMIAN CRETACEOUS BASIN TOMÁŠ KOČÍ Department of Palaeontology, Natural History Museum, National Museum, Václavské náměstí 68, 115 79 Praha 1, the Czech Republic; Ivančická 581, Praha 9 – Letňany 199 00, the Czech Republic; e-mail: [email protected] MANFRED JÄGER Lindenstrasse 53, D-72348 Rosenfeld, Germany; e-mail: [email protected] Kočí, T., Jäger, M. (2015): Filogranula cincta (GOLDFUSS, 1831), a serpulid worm (Polychaeta, Sedentaria, Serpulidae) from the Bohemian Cretaceous Basin. – Acta Mus. Nat. Pragae, Ser. B Hist. Nat., 71(3-4): 293–300, Praha. ISSN 1804-6479. Abstract. Tubes of the serpulid worm Filogranula cincta (GOLDFUSS, 1831) were found in several rocky coast facies and other nearshore / shallow water localities in the Bohemian Cretaceous Basin ranging in geological age from the Late Cenomanian to the Late Turonian. A mor - phological description, discussion regarding systematics and taxonomy and notes on palaeoecology and stratigraphy are presented. ■ Late Cretaceous, Polychaeta, Filogranula, Serpulidae, Palaeoecology Received April 24, 2015 Issued December, 2015 Introduction any Filogranula cincta specimen. It seems that, apart from the vague mention from Strehlen by Wegner (1913), for more Filogranula cincta (GOLDFUSS, 1831) is a small and than a hundred years no additional finds of Filogranula inconspicuous but nevertheless common serpulid species in cincta from the BCB had been published until the present the Bohemian Cretaceous Basin (BCB). -
A Probable Oligochaete from an Early Triassic Lagerstätte of the Southern Cis-Urals and Its Evolutionary Implications
Editors' choice A probable oligochaete from an Early Triassic Lagerstätte of the southern Cis-Urals and its evolutionary implications DMITRY E. SHCHERBAKOV, TARMO TIMM, ALEXANDER B. TZETLIN, OLEV VINN, and ANDREY Y. ZHURAVLEV Shcherbakov, D.E., Timm, T., Tzetlin, A.B., Vinn, O., and Zhuravlev, A.Y. 2020. A probable oligochaete from an Early Triassic Lagerstätte of the southern Cis-Urals and its evolutionary implications. Acta Palaeontologica Polonica 65 (2): 219–233. Oligochaetes, despite their important role in terrestrial ecosystems and a tremendous biomass, are extremely rare fossils. The palaeontological record of these worms is restricted to some cocoons, presumable trace fossils and a few body fossils the most convincing of which are discovered in Mesozoic and Cenozoic strata. The Olenekian (Lower Triassic) siliciclastic lacustrine Petropavlovka Lagerstätte of the southern Cis-Urals yields a number of extraordinary freshwater fossils including an annelid. The segmented body with a secondary annulation of this fossil, a subtriangular prostomium, a relatively thick layered body wall and, possibly, the presence of a genital region point to its oligochaete affinities. Other fossil worms which have been ascribed to clitellates are reviewed and, with a tentative exception of two Pennsylvanian finds, affinities of any pre-Mesozoic forms to clitellate annelids are rejected. The new fossil worm allows tracing of a persuasive oligochaete record to the lowermost Mesozoic and confirms a plausibility of the origin of this annelid group in freshwater conditions. Key words: Annelida, Clitellata, Oligochaeta, Mesozoic, Lagerstätte, Russia. Dmitry E. Shcherbakov [[email protected]], Borissiak Palaeontological Institute, Russian Academy of Sciences, Profso- yuz naya St 123, Moscow 117647, Russia. -
Polychaeta, Serpulidae) from the Hawaiian Islands1 JULIE H
Deepwater Tube Worms (Polychaeta, Serpulidae) from the Hawaiian Islands1 JULIE H. BAILEy-BROCK2 THREE SERPULID TUBE WORMS have been dis (1906), but no serpulids were found. Hart covered on shells and coral fragments taken in man (1966a) reviewed the literature in an dredges from around the Hawaiian Islands. The extensive analysis of the Hawaiian polychaete two serpulines Spirobranchus latiscapus Maren fauna. Straughan (1969), presented a more zeller and Vermiliopsis infundibulum Philippi recent survey of the littoral and upper sublit are new records for the islands. However, the toral Serpulidae. Other works by Vine (1972) small spirorbid Pileolaria (Duplicaria) dales and Vine, Bailey-Brock, and Straughan (1972) traughanae Vine has been described previously include ecological data collected from settle from within diving depths (Vine, 1972), but ment plates and by diving, but no records ex it is absent from shoal waters and intertidal re tend below 28 meters. Serpulids have been gions. 3 The occurrence of this species in the described from deepwater collections in other dredged collections indicates an extensive depth parts of the world. Southward (1963) found range in the Hawaiian Islands. 14 species of calcareous tube worms on hard The tube worms were obtained from col substrata dredged from depths as great as 1,755 lections taken during two separate oceano meters along the continental shelf off south graphic investigations in Hawaiian waters. western Britain. Antarctic collections yielded 14 Material consisting mostly of the pink serpuline genera and more than 23 species from depths Spirobranchus latiscapus was loaned by Dr. E. C. ranging from the littoral zone down to 4,930 Jones of the National Marine Fisheries Service 4,963 meters in the South Sandwich Trench (N.M.F.S.) and was taken from an average (Hartman, 1966b, 1967). -
Phylogenomics of Tubeworms (Siboglinidae, Annelida) and Comparative Performance of Different Reconstruction Methods
Zoologica Scripta Phylogenomics of tubeworms (Siboglinidae, Annelida) and comparative performance of different reconstruction methods YUANNING LI,KEVIN M. KOCOT,NATHAN V. WHELAN,SCOTT R. SANTOS,DAMIEN S. WAITS, DANIEL J. THORNHILL &KENNETH M. HALANYCH Submitted: 28 January 2016 Li, Y., Kocot, K.M., Whelan, N.V., Santos, S.R., Waits, D.S., Thornhill, D.J. & Halanych, Accepted: 18 June 2016 K.M. (2016). Phylogenomics of tubeworms (Siboglinidae, Annelida) and comparative perfor- doi:10.1111/zsc.12201 mance of different reconstruction methods. —Zoologica Scripta, 00: 000–000. Deep-sea tubeworms (Annelida, Siboglinidae) represent dominant species in deep-sea chemosynthetic communities (e.g. hydrothermal vents and cold methane seeps) and occur in muddy sediments and organic falls. Siboglinids lack a functional digestive tract as adults, and they rely on endosymbiotic bacteria for energy, making them of evolutionary and physi- ological interest. Despite their importance, inferred evolutionary history of this group has been inconsistent among studies based on different molecular markers. In particular, place- ment of bone-eating Osedax worms has been unclear in part because of their distinctive biol- ogy, including harbouring heterotrophic bacteria as endosymbionts, displaying extreme sexual dimorphism and exhibiting a distinct body plan. Here, we reconstructed siboglinid evolutionary history using 12 newly sequenced transcriptomes. We parsed data into three data sets that accommodated varying levels of missing data, and we evaluate effects of miss- ing data on phylogenomic inference. Additionally, several multispecies-coalescent approaches and Bayesian concordance analysis (BCA) were employed to allow for a compar- ison of results to a supermatrix approach. Every analysis conducted herein strongly sup- ported Osedax being most closely related to the Vestimentifera and Sclerolinum clade, rather than Frenulata, as previously reported.