Extraction and Screening of Bioactive Compounds with Antimicrobial
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Investigating Genetic, Gene Expression and Proteomic Changes Over Temperature Gradients in Intertidal Nerita Species
INVESTIGATING GENETIC, GENE EXPRESSION AND PROTEOMIC CHANGES OVER TEMPERATURE GRADIENTS IN INTERTIDAL NERITA SPECIES Shorash Amin Bachelor of Biomedical Science (1A Honours) Submitted in fulfilment of the requirements for the degree of Doctor of Philosophy School of Biomedical Sciences Faculty of Health Queensland University of Technology 2018 Investigating genetic, gene expression and proteomic changes over temperature gradients in intertidal Nerita species i Keywords De novo assembly; digital gene expression; genomics; heat shock protein; Ion torrent; transcriptome; Nerita albicilla; Nerita melanotragus; molluscs; proteome; RNAseq; thermal stress; Nerita melanotragus, Illumina. ii Investigating genetic, gene expression and proteomic changes over temperature gradients in intertidal Nerita species Abstract A key area of research in physiological genomics is understanding the gene expression and proteomic responses of specific species to abiotic change in their habitat. In order to investigate these responses, an appropriate group of organisms is required that is distributed across an environmental gradient. One such group of organisms that meet this requirement are class Gastropoda, which are distributed globally in a range of different environments. This highly speciose group are important socially, economically and ecologically. Species from this taxonomic group form a large component of intertidal zone fauna in many areas, globally. The intertidal zone is amongst the harshest of environments on Earth, with constant changes in temperature, pH, sea level and UV exposure. Furthermore, species inhabiting these areas are periodically submerged due to the tidal cycle. The intertidal zone can be further subdivided into the spray, upper, mid and lower intertidal sub zones. Abiotic stresses also vary across these habitats as does the level of submergence. -
2347-503X Assessment of Coastal Pollution Using Faunal Composit
Research Chronicler, International Multidisciplinary Refereed Peer Reviewed Indexed Research Journal ISSN: Print: 2347-5021 www.research-chronicler.com ISSN: Online: 2347-503X Assessment of Coastal Pollution Using Faunal Composition of Macrobenthos from Panvel Creek, Navi Mumbai, West Coast of India Prabhakar Ramchandra Pawar,1 Leena N. Meshram,2 Sunil M. Udawant,3 Rauphunnisa F. Inamdar4 1,2,3Mahatma Phule Arts, Science & Commerce College, Panvel, Dist. – Raigad, Navi Mumbai, (M.S.) India 4Veer Wajekar Arts, Science & Commerce College, Phunde, Uran, Dist. – Raigad, Navi Mumbai, (M.S.) India Abstract Diversity of macrobenthos from Panvel creek remain poorly known. Here, the species composition and abundance of macrobenthos is explored from June 2018 to May 2019 to assess the ecological status of the creek. 18 species of macrobenthic fauna consisting of 14 genera, 12 families, 06 orders and 05 classes were recorded. The most abundant taxa were polychaetes, crustaceans, gastropods and pelecypods. Species belonging to Polynoidae, Cerithiidae, Potamididae, Neritidae and Trapezidae shows highest distribution and abundance. The creek is dominated by Perinereis cultrifera, Clypeomorus bifasciata, Potamides cingulatus, Nerita oryzarum and Neotrapezium sublaevigatum. N. sublaevigatum of the family Trapezidae from the class Bivalvia is recorded as an opportunistic taxa which exploits disturbed condition due to environmental stress. This study showed that at present though the creek is resourceful and supports the coastal marine life, is under considerable stress of anthropogenic inputs. Coastal environment of Panvel creek is deteriorating due to ongoing construction of Navi Mumbai International Airport and unplanned development activities. Present information could be helpful as a baseline data for further study of anthropogenic inputs on coastal ecosystem of Panvel creek. -
(Harmful) Algal Blooms (H)Abs
Centre National d’Etudes Spatiales Cyanobacteria in Baltic sea, 30-June-2003, MODIS. State of the Art Remote Sensing for Health applications N° Ref.: 044-R755-v1.1-a 15 July 2010 Centre National d’Etudes Spatiales Page: 1/43 State of the art: remote sensing for health applications Date: 15 July 2010 Ref. 044-R755-v1.1-a All rights reserved - 2009-2010 ACRI-ST – All rights reserved CONFIDENTIAL Centre National d’Etudes Spatiales Page: 2/43 State of the art: remote sensing for health applications Date: 15 July 2010 Ref. 044-R755-v1.1-a All rights reserved - 2009-2010 ACRI-ST – All rights reserved CONFIDENTIAL Control document table Nom et Fonction Date Signature Prepared by Jérôme Bruniquel 15/07/2010 Chloé Vincent 15/07/2010 Reviewed by Antoine Mangin 15/07/2010 Authorised Odile Fanton d’Andon 15/07/2010 by Change log Version Date Description Modification 1.0 15/07/2010 Final report on the state of the art – Remote Translation of the Sensing applied to Health French version Centre National d’Etudes Spatiales Page: 3/43 State of the art: remote sensing for health applications Date: 15 July 2010 Ref. 044-R755-v1.1-a All rights reserved - 2009-2010 ACRI-ST – All rights reserved CONFIDENTIAL Centre National d’Etudes Spatiales Page: 4/43 State of the art: remote sensing for health applications Date: 15 July 2010 Ref. 044-R755-v1.1-a All rights reserved - 2009-2010 ACRI-ST – All rights reserved CONFIDENTIAL Table of content 1 INTRODUCTION ....................................................................................................................................... 7 2 INFECTIOUS DISEASES TRANSMITTED BY AGENTS OR BY WATER ..................................... -
Checklist of Marine Gastropods Around Tarapur Atomic Power Station (TAPS), West Coast of India Ambekar AA1*, Priti Kubal1, Sivaperumal P2 and Chandra Prakash1
www.symbiosisonline.org Symbiosis www.symbiosisonlinepublishing.com ISSN Online: 2475-4706 Research Article International Journal of Marine Biology and Research Open Access Checklist of Marine Gastropods around Tarapur Atomic Power Station (TAPS), West Coast of India Ambekar AA1*, Priti Kubal1, Sivaperumal P2 and Chandra Prakash1 1ICAR-Central Institute of Fisheries Education, Panch Marg, Off Yari Road, Versova, Andheri West, Mumbai - 400061 2Center for Environmental Nuclear Research, Directorate of Research SRM Institute of Science and Technology, Kattankulathur-603 203 Received: July 30, 2018; Accepted: August 10, 2018; Published: September 04, 2018 *Corresponding author: Ambekar AA, Senior Research Fellow, ICAR-Central Institute of Fisheries Education, Off Yari Road, Versova, Andheri West, Mumbai-400061, Maharashtra, India, E-mail: [email protected] The change in spatial scale often supposed to alter the Abstract The present study was carried out to assess the marine gastropods checklist around ecologically importance area of Tarapur atomic diversity pattern, in the sense that an increased in scale could power station intertidal area. In three tidal zone areas, quadrate provide more resources to species and that promote an increased sampling method was adopted and the intertidal marine gastropods arein diversity interlinks [9]. for Inthe case study of invertebratesof morphological the secondand ecological largest group on earth is Mollusc [7]. Intertidal molluscan communities parameters of water and sediments are also done. A total of 51 were collected and identified up to species level. Physico chemical convergence between geographically and temporally isolated family dominant it composed 20% followed by Neritidae (12%), intertidal gastropods species were identified; among them Muricidae communities [13]. -
Bab Iv Hasil Penelitian Dan Pembahasan
BAB IV HASIL PENELITIAN DAN PEMBAHASAN A. Hasil Penelitian dan Pembahasan Tahap 1 1. Kondisi Faktor Abiotik Ekosistem perairan dapat dipengaruhi oleh suatu kesatuan faktor lingkungan, yaitu biotik dan abiotik. Faktor abiotik merupakan faktor alam non-organisme yang mempengaruhi proses perkembangan dan pertumbuhan makhluk hidup. Dalam penelitian ini, dilakukan analisis faktor abiotik berupa faktor kimia dan fisika. Faktor kimia meliputi derajat keasaman (pH). Sedangkan faktor fisika meliputi suhu dan salinitas air laut. Hasil pengukuran suhu, salinitas, dan pH dapat dilihat sebagai tabel berikut: Tabel 4.1 Faktor Abiotik Pantai Peh Pulo Kabupaten Blitar Faktor Abiotik No. Letak Substrat Suhu Salinitas Ph P1 29,8 20 7 Berbatu dan Berpasir S1 1. P2 30,1 23 7 Berbatu dan Berpasir P3 30,5 28 7 Berbatu dan Berpasir 2. P1 29,7 38 8 Berbatu dan Berpasir S2 P2 29,7 40 7 Berbatu dan Berpasir P3 29,7 33 7 Berbatu dan Berpasir 3. P1 30,9 41 7 Berbatu dan Berpasir S3 P2 30,3 42 8 Berbatu dan Berpasir P3 30,1 41 7 Berbatu dan Berpasir 77 78 Tabel 4.2 Rentang Nilai Faktor Abiotik Pantai Peh Pulo Faktor Abiotik Nilai Suhu (˚C) 29,7-30,9 Salinitas (%) 20-42 Ph 7-8 Berdasarkan pengukuran faktor abiotik lingkungan, masing-masing stasiun pengambilan data memiliki nilai yang berbeda. Hal ini juga mempengaruhi kehidupan gastropoda yang ditemukan. Kehidupan gastropoda sangat dipengaruhi oleh besarnya nilai suhu. Suhu normal untuk kehidupan gastropoda adalah 26-32˚C.80 Sedangkan menurut Sutikno, suhu sangat mempengaruhi proses metabolisme suatu organisme, gastropoda dapat melakukan proses metabolisme optimal pada kisaran suhu antara 25- 32˚C. -
Some Central Pacific Crustaceans by CHARLES HOWARD EDMONDSON Bernice P
OCCASIONAL PAPERS OF BERNICE P. BISHOP MUSEUM HONOLULU, HAWAII I Volume XX August 29, 1951 NumJ>er 13 Some Central Pacific Crustaceans By CHARLES HOWARD EDMONDSON BERNIce P. BtSHOJ' MOSEtrM INTRODUCTION The following report on crustaceans selected from materia1lwhich has accumulated in Bishop Museum for several years inc1uder (1), new species, (2) known species as new Hawaiian records, an,(i (3) known species rarely recorded in the central Pacific. Recently, valuable collections have been received as a result of the current dredging operations of the M alliin, a boat of the Fi hand Game Division, Territorial Board of Agriculture and Forestry. These collections clearly reveal the presence of a crustacean fauna a ut the Hawaiian Islands. at depths of about 10 fathoms and beyond, which is not seen on the shallow reefs. Many of the unique species taken nearly 50 years ago by the Albatross of the United States Fis Com~ mission have again been brought to view. Other rare crustaceans recorded in the report were receive1 from the Honolulu Aquarium and came from fish traps operated b~ com mercial fishermen off the coast of Oahu at depths ranging aro~nd 16 fathoms. These specimens show that fauna at these depths har close affinities with that of the western Pacific and the Indian Ocej. It is well known that many organisms, both land and marine ~orrns, have been introduced into the Hawaiian area within recent I.years, chiefly as a result of war activities. Ocean-going craft returning to Hawaii from forward areas in the Pacific transport on theil' hulls marine organisms not previously recognized among local shore fauna, and some of these inunigrants become established in the new e9viron ment. -
Annotated Checklist of New Zealand Decapoda (Arthropoda: Crustacea)
Tuhinga 22: 171–272 Copyright © Museum of New Zealand Te Papa Tongarewa (2011) Annotated checklist of New Zealand Decapoda (Arthropoda: Crustacea) John C. Yaldwyn† and W. Richard Webber* † Research Associate, Museum of New Zealand Te Papa Tongarewa. Deceased October 2005 * Museum of New Zealand Te Papa Tongarewa, PO Box 467, Wellington, New Zealand ([email protected]) (Manuscript completed for publication by second author) ABSTRACT: A checklist of the Recent Decapoda (shrimps, prawns, lobsters, crayfish and crabs) of the New Zealand region is given. It includes 488 named species in 90 families, with 153 (31%) of the species considered endemic. References to New Zealand records and other significant references are given for all species previously recorded from New Zealand. The location of New Zealand material is given for a number of species first recorded in the New Zealand Inventory of Biodiversity but with no further data. Information on geographical distribution, habitat range and, in some cases, depth range and colour are given for each species. KEYWORDS: Decapoda, New Zealand, checklist, annotated checklist, shrimp, prawn, lobster, crab. Contents Introduction Methods Checklist of New Zealand Decapoda Suborder DENDROBRANCHIATA Bate, 1888 ..................................... 178 Superfamily PENAEOIDEA Rafinesque, 1815.............................. 178 Family ARISTEIDAE Wood-Mason & Alcock, 1891..................... 178 Family BENTHESICYMIDAE Wood-Mason & Alcock, 1891 .......... 180 Family PENAEIDAE Rafinesque, 1815 .................................. -
Lamellidens Marginalis
HAEMATOLOGlCAL STUDIES ON THE FRESHWATER MUSSEL Lamellidens marginal is (Lamark, 1819) THESIS SUBMITTED TO COCHIN UNIVERSITY OF SCIENCE AND TECHNOLOGY IN PARTIAL FULFILMENT OF THE REQUIREMENTS FOR THE DEGREE OF DOCTOR OF PHILOSOPHY UNDER THE FACULTY OF ENVIRONMENTAL STUDIES BY K· RAMANATHAN SCHOOL OF ENVIRONMENTAL STUDIES COCHIN UNIVERSITY OF SCIENCE AND TECHNOLOGY COCHIN 682 016 1993 CERTIFICATE This is to certify that this thesis is a bonafide record of the research work carried out by Mr.K.Ramanathan, full-time research scholar, under my scientific supervision and guidance, in partial fulfilment of the requirements for the degree of Doctor of Philosophy of the Cochin University of Science and Technology under the School of Environmental Studies. and no part thereof has been presented for the award of any other degree, diploma, or associateship in any University. Dr.A.l~~H HEAD 0 THE DEPARTMENT, School of Environmental Studies, Cochin University of Science and Technology, COCHIN-682 016. DECLARATION I, K.Ramanathan, do here by declare that this thesis entitled " HAEMATOLOGICAL STUDIES ON FRESHWATER MUSSEL- Lamellidens marginalis (Lamarck,1819'" is a genuine record of the research work carried out by me under the guidance and supervision of Dr.A.Mohandas, Head, School of Environmental Studies, Cochin University of Science and Technology, and no part has been previously formed the basis for the award of any degree, diploma, or associateship of any university. • 1 Cochin-682 016 K.Ramanathan ACKNOWLEDGEMENTS I wish to express my Slncere gratitude to Dr.A.Mohandas, Head, School of Environmental Studies, Cochin University of Science and Technology, for giving me an opportunity to work under his supervision, encouragement, and for critical evaluation of the manuscript. -
Larval Development of the Xanthid Crab, Ozius Rugulosus Rugulosus Stimpson (Decapoda, Brachyura) Under Laboratory Conditions
Indian Journal of Marine Sciences Vol. 6, June 1977, pp. 26-30 Larval Development of the Xanthid Crab, Ozius rugulosus rugulosus Stimpson (Decapoda, Brachyura) under Laboratory Conditions v. s. KAKATI* & v. N. NAYAK Karnatak University Marine Station, Postgraduate Department of Marine Biology, Kodibag,Karwar 581303 Received 3 January 1977; revised received 11 April 1977 Complete life history of the O. rugulosus rugutosus, as observed in the laboratory, compris- ing 4 zoeal and a megalopa stages, is described. Comparisons are made with the larvae of O. truncatus from New Zealand, the only other species of the genus in which the larvae are so far known. Important generic features suggested, based on the present work, are dorsal spine on 1st abdominal segment in zoeal stages and ventral spine on ischium of chiliped of rnegalopa. HE crab family Xanthidae is one of the most 0·53 mm : abdomen length, 1·12 mm; and duration predominant families of rocky shore crabs, of stage, 3-5 days. T represented by number of genera, including Carapace with rostral, dorsal and lateral spines, Ozius. Larvae of many of the genera are fairly dorsal spine curved posteriorly and with a pair of well known from different regions of the worldv+, small setae basally on carapace; a medio-dorsal As far as the genus Ozius is concerned, however, ann a medic-frontal tubercles (Figs. 1 and 2). larval information is restricted only to 2 species- Eyes sessile. Al (Fig. 3): Uniramous, with 2 O. truncaius from New Zealand described by Wear" aesthetascs and a seta. A2 (Fig. 4) : Spinous process who deals with the complete life history of this well developed with 2 rows of spinules ; exopod half species reared in the laboratory. -
The Stalk-Eyed Crustacea of Peru and the Adjacent Coast
\\ ij- ,^y j 1 ^cj^Vibon THE STALK-EYED CRUSTACEA OF PERU AND THE ADJACENT COAST u ¥' A- tX %'<" £ BY MARY J. RATHBUN Assistant Curator, Division of Marine Invertebrates, U. S. National Museur No. 1766.—From the Proceedings of the United States National Museum, '<•: Vol.*38, pages 531-620, with Plates 36-56 * Published October 20, 1910 Washington Government Printing Office 1910 UQS3> THE STALK-EYED CRUSTACEA OF PERU AND THE ADJA CENT COAST. By MARY J. RATHBUN, Assistant Curator, Division of Marine Invertebrates, U. S. National Museum. INTKODUCTION. Among the collections obtained by Dr. Robert E. Coker during his investigations of the fishery resources of Peru during 1906-1908 were a large number of Crustacea, representing 80 species. It was the original intention to publish the reports on the Crustacea under one cover, but as it has not been feasible to complete them at the same time, the accounts of the barnacles a and isopods b have been issued first. There remain the decapods, which comprise the bulk of the collection, the stomatopods, and two species of amphipods. One of these, inhabiting the sea-coast, has been determined by Mr. Alfred O. Walker; the other, from Lake Titicaca, by Miss Ada L. Weckel. See papers immediately following. Throughout this paper, the notes printed in smaller type were con tributed by Doctor Coker. One set of specimens has been returned to the Peruvian Government; the other has been given to the United States National Museum. Economic value.—The west coast of South America supports an unusual number of species of large crabs, which form an important article of food. -
Predatory Shore Crab Ozius Truncutus (Decapoda: Xanthidae)
d 0 The Feeding Ecology and Behaviour of a predatory shore crab Ozius truncutus (Decapoda: Xanthidae) Kalayarasy Sivaguru ,r$Bi-, $ tu.r \"i1;*" lil ilIillililili liltilillIlt til Thesis Library- EUSL A thesis submitted in fulfilment of the requirements for the degree of Master of Science in Biological Sciences, University of Auckland, New Zealand, 1997 37 421 Abstract $,1FfJ'l rlIl fr[][NC Pr 1;1:i11r This thesis documents some aspects of the population ecology, feeding biology and behaviour of the shore crab Ozius truncatus (Decapod: Brachyura: Xanthidae), both in laboratory experiments and field sampling. Field research was carried out at Echinoderm Reef near the University of Auckland's Leigh Marine Laboratory in nofih-eastem New Zealand. 0.truncatus is a predator, sparsely distributed in patches of cobbles in mid to upper regions of the shore. Its distribution overlaps with a wide range of food items in the habitat, including other crabs, coiled gastropods, limpets and chitons. It forages primarily within the cobble patches. Prey species in this habitat on Echinoderm Reef appear to be abundant and crab numbers are considered too low to have a major impact on prey populations. The crab size most frequently encountered on Echinodem Reef was between 20-45 mm carapace length (C[,) but there was no clear size structure to indicate particular age groups. Strong recruitment occurred from January to March 1997 and was much higher in 1!97 than in the corresponding period of 1996. Ovigerous females were observed from October 1996 to February 1997, with a peak in November 1996. The cheiipeds of male and female O.trurtcalus are dimorphic, as in most other molluscivorous crabs, and are used to break open the shells of prey. -
Neaiiionnn A
() neaiiionnn a ZJiA wzuxiwtitn rim iír'iVA ,IriVJ,ir,JrViQiri,t!r,4 !rtw,iimnrAiI!tFtkx,HriiItiY) UNEP Regional Seas Reports and Studies No. 116 Prepared in co-operation with , s1 4t Association of Sojtheast Asian Marine Scientists i1llaI1DI Note: This document was prepared for the United Nations Environment Progranme (UNEP) with the editorial assistance of the Association of Southeast Asian Marine Scientists (ASEAMS) under the project FP/5102-82--05 as a contribution to the development of the action plan for the protection and development of the marine and coastal areas of the East Asian Seas Region. The designations employed and the presentation of the material in this document do not imply the expression of any opinion whatsoever on the part of UNEP concerning the legal status of any State, Territory, city or area, or of its authorities, or concerning the delimitations of its frontiers or boundaries. For bibliographic purposes this document may be cited as: ASEAMS/UNEP: Proceedings of the First ASEAMS Symposium on Southeast Asian Marine Science and Environmental Protection. UNEP Regional Seas Reports and Studies No. 116. UNEP, 1990. p eoz-O®R iL V - : - I.-.-- - - A9A ZS UNITED NATIONS ENVIRONMENT PROGRAMME Proceedings of the Finil A SEA MS Symposium on Southeast Asian Marine Science and Environmental Protection UNEP Regional Seas Reports and Studies No. 116 Prepared in co—operation with C9 = Association of Southeast Asian Marine Scientists IJNEP 1990 PREFACE The United Nations Conference on the HtNnan Envirorinent (Stockholm, 5-16 June 1912) adopted the Action Plan for the Hisnan Environment, including the General Principles for Assessment and Control of Marine Pollution.