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Strategies to Increase ß-Cell Mass Expansion
This electronic thesis or dissertation has been downloaded from the King’s Research Portal at https://kclpure.kcl.ac.uk/portal/ Strategies to increase -cell mass expansion Drynda, Robert Lech Awarding institution: King's College London The copyright of this thesis rests with the author and no quotation from it or information derived from it may be published without proper acknowledgement. END USER LICENCE AGREEMENT Unless another licence is stated on the immediately following page this work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International licence. https://creativecommons.org/licenses/by-nc-nd/4.0/ You are free to copy, distribute and transmit the work Under the following conditions: Attribution: You must attribute the work in the manner specified by the author (but not in any way that suggests that they endorse you or your use of the work). Non Commercial: You may not use this work for commercial purposes. No Derivative Works - You may not alter, transform, or build upon this work. Any of these conditions can be waived if you receive permission from the author. Your fair dealings and other rights are in no way affected by the above. Take down policy If you believe that this document breaches copyright please contact [email protected] providing details, and we will remove access to the work immediately and investigate your claim. Download date: 02. Oct. 2021 Strategies to increase β-cell mass expansion A thesis submitted by Robert Drynda For the degree of Doctor of Philosophy from King’s College London Diabetes Research Group Division of Diabetes & Nutritional Sciences Faculty of Life Sciences & Medicine King’s College London 2017 Table of contents Table of contents ................................................................................................. -
CDKN1B-Y88 Antibody Purified Rabbit Polyclonal Antibody (Pab) Catalog # Ap20721b
10320 Camino Santa Fe, Suite G San Diego, CA 92121 Tel: 858.875.1900 Fax: 858.622.0609 CDKN1B-Y88 Antibody Purified Rabbit Polyclonal Antibody (Pab) Catalog # AP20721b Specification CDKN1B-Y88 Antibody - Product Information Application WB,E Primary Accession P46527 Other Accession Q60439 Reactivity Human Predicted Hamster Host Rabbit Clonality Polyclonal Isotype Rabbit IgG CDKN1B-Y88 Antibody - Additional Information Gene ID 1027 Other Names Cyclin-dependent kinase inhibitor 1B, Cyclin-dependent kinase inhibitor p27, Western blot analysis of lysate from MCF-7 p27Kip1, CDKN1B, KIP1 cell line, using CDKN1B-Y88 (Cat. #AP20721b). AP20721b was diluted at Target/Specificity 1:1000. A goat anti-rabbit IgG H&L(HRP) at This antibody is generated from a rabbit 1:5000 dilution was used as the secondary immunized with a KLH conjugated synthetic antibody. Lysate at 35ug. peptide between 81-113 amino acids from human. CDKN1B-Y88 Antibody - Background Dilution WB~~1:1000 Important regulator of cell cycle progression. Involved in G1 arrest. Potent inhibitor of cyclin Format E- and cyclin A-CDK2 complexes. Forms a Purified polyclonal antibody supplied in PBS complex with cyclin type D-CDK4 complexes with 0.09% (W/V) sodium azide. This antibody is purified through a protein A and is involved in the assembly, stability, and column, followed by peptide affinity modulation of CCND1- CDK4 complex purification. activation. Acts either as an inhibitor or an activator of cyclin type D-CDK4 complexes Storage depending on its phosphorylation state and/or Maintain refrigerated at 2-8°C for up to 2 stoichometry. weeks. For long term storage store at -20°C in small aliquots to prevent freeze-thaw CDKN1B-Y88 Antibody - References cycles. -
Smchd1-Dependent and -Independent Pathways Determine Developmental Dynamics of Cpg Island Methylation on The
Edinburgh Research Explorer Smchd1-Dependent and -Independent Pathways Determine Developmental Dynamics of CpG Island Methylation on the Inactive X Chromosome Citation for published version: Gendrel, AV, Apedaile, A, Coker, H, Termanis, A, Zvetkova, I, Godwin, J, Montana, G, Taylor, S, Giannoulatou, E, Heard, E, Stancheva, I & Brockdorff, N 2012, 'Smchd1-Dependent and -Independent Pathways Determine Developmental Dynamics of CpG Island Methylation on the Inactive X Chromosome', Developmental Cell, vol. 23, no. 2, pp. 265–279. https://doi.org/10.1016/j.devcel.2012.06.011 Digital Object Identifier (DOI): 10.1016/j.devcel.2012.06.011 Link: Link to publication record in Edinburgh Research Explorer Document Version: Publisher's PDF, also known as Version of record Published In: Developmental Cell General rights Copyright for the publications made accessible via the Edinburgh Research Explorer is retained by the author(s) and / or other copyright owners and it is a condition of accessing these publications that users recognise and abide by the legal requirements associated with these rights. Take down policy The University of Edinburgh has made every reasonable effort to ensure that Edinburgh Research Explorer content complies with UK legislation. If you believe that the public display of this file breaches copyright please contact [email protected] providing details, and we will remove access to the work immediately and investigate your claim. Download date: 07. Oct. 2021 Developmental Cell Article Smchd1-Dependent and -Independent Pathways Determine Developmental Dynamics of CpG Island Methylation on the Inactive X Chromosome Anne-Valerie Gendrel,1,7,8 Anwyn Apedaile,3,8 Heather Coker,1 Ausma Termanis,4 Ilona Zvetkova,3,9 Jonathan Godwin,1 Y. -
Replace This with the Actual Title Using All Caps
UNDERSTANDING THE GENETICS UNDERLYING MASTITIS USING A MULTI-PRONGED APPROACH A Dissertation Presented to the Faculty of the Graduate School of Cornell University In Partial Fulfillment of the Requirements for the Degree of Doctor of Philosophy by Asha Marie Miles December 2019 © 2019 Asha Marie Miles UNDERSTANDING THE GENETICS UNDERLYING MASTITIS USING A MULTI-PRONGED APPROACH Asha Marie Miles, Ph. D. Cornell University 2019 This dissertation addresses deficiencies in the existing genetic characterization of mastitis due to granddaughter study designs and selection strategies based primarily on lactation average somatic cell score (SCS). Composite milk samples were collected across 6 sampling periods representing key lactation stages: 0-1 day in milk (DIM), 3- 5 DIM, 10-14 DIM, 50-60 DIM, 90-110 DIM, and 210-230 DIM. Cows were scored for front and rear teat length, width, end shape, and placement, fore udder attachment, udder cleft, udder depth, rear udder height, and rear udder width. Independent multivariable logistic regression models were used to generate odds ratios for elevated SCC (≥ 200,000 cells/ml) and farm-diagnosed clinical mastitis. Within our study cohort, loose fore udder attachment, flat teat ends, low rear udder height, and wide rear teats were associated with increased odds of mastitis. Principal component analysis was performed on these traits to create a single new phenotype describing mastitis susceptibility based on these high-risk phenotypes. Cows (N = 471) were genotyped on the Illumina BovineHD 777K SNP chip and considering all 14 traits of interest, a total of 56 genome-wide associations (GWA) were performed and 28 significantly associated quantitative trait loci (QTL) were identified. -
Environmental Influences on Endothelial Gene Expression
ENDOTHELIAL CELL GENE EXPRESSION John Matthew Jeff Herbert Supervisors: Prof. Roy Bicknell and Dr. Victoria Heath PhD thesis University of Birmingham August 2012 University of Birmingham Research Archive e-theses repository This unpublished thesis/dissertation is copyright of the author and/or third parties. The intellectual property rights of the author or third parties in respect of this work are as defined by The Copyright Designs and Patents Act 1988 or as modified by any successor legislation. Any use made of information contained in this thesis/dissertation must be in accordance with that legislation and must be properly acknowledged. Further distribution or reproduction in any format is prohibited without the permission of the copyright holder. ABSTRACT Tumour angiogenesis is a vital process in the pathology of tumour development and metastasis. Targeting markers of tumour endothelium provide a means of targeted destruction of a tumours oxygen and nutrient supply via destruction of tumour vasculature, which in turn ultimately leads to beneficial consequences to patients. Although current anti -angiogenic and vascular targeting strategies help patients, more potently in combination with chemo therapy, there is still a need for more tumour endothelial marker discoveries as current treatments have cardiovascular and other side effects. For the first time, the analyses of in-vivo biotinylation of an embryonic system is performed to obtain putative vascular targets. Also for the first time, deep sequencing is applied to freshly isolated tumour and normal endothelial cells from lung, colon and bladder tissues for the identification of pan-vascular-targets. Integration of the proteomic, deep sequencing, public cDNA libraries and microarrays, delivers 5,892 putative vascular targets to the science community. -
Myopia in African Americans Is Significantly Linked to Chromosome 7P15.2-14.2
Genetics Myopia in African Americans Is Significantly Linked to Chromosome 7p15.2-14.2 Claire L. Simpson,1,2,* Anthony M. Musolf,2,* Roberto Y. Cordero,1 Jennifer B. Cordero,1 Laura Portas,2 Federico Murgia,2 Deyana D. Lewis,2 Candace D. Middlebrooks,2 Elise B. Ciner,3 Joan E. Bailey-Wilson,1,† and Dwight Stambolian4,† 1Department of Genetics, Genomics and Informatics and Department of Ophthalmology, University of Tennessee Health Science Center, Memphis, Tennessee, United States 2Computational and Statistical Genomics Branch, National Human Genome Research Institute, National Institutes of Health, Baltimore, Maryland, United States 3The Pennsylvania College of Optometry at Salus University, Elkins Park, Pennsylvania, United States 4Department of Ophthalmology, University of Pennsylvania, Philadelphia, Pennsylvania, United States Correspondence: Joan E. PURPOSE. The purpose of this study was to perform genetic linkage analysis and associ- Bailey-Wilson, NIH/NHGRI, 333 ation analysis on exome genotyping from highly aggregated African American families Cassell Drive, Suite 1200, Baltimore, with nonpathogenic myopia. African Americans are a particularly understudied popula- MD 21131, USA; tion with respect to myopia. [email protected]. METHODS. One hundred six African American families from the Philadelphia area with a CLS and AMM contributed equally to family history of myopia were genotyped using an Illumina ExomePlus array and merged this work and should be considered co-first authors. with previous microsatellite data. Myopia was initially measured in mean spherical equiv- JEB-W and DS contributed equally alent (MSE) and converted to a binary phenotype where individuals were identified as to this work and should be affected, unaffected, or unknown. -
Richard P. Ebstein
February 2020 Richard P. Ebstein Professor: C2BEF (China Center for Behavior Economics and Finance), Sourthwestern University of Finance and Economics, Chengdu, China Professor: Zhejiang University of Technology, College of Economics and Management DEGREES/DIPLOMAS/PROFESSIONAL QUALIFICATION 1963 BSc Union College, Schenectady, New York 1965 MS Yale University, New Haven 1968 PhD Yale University, New Haven PREVIOUS EMPLOYMENT 1968 1972 Lecturer, Hebrew University, Rehovot 1972 1973 Assistant Professor, New York University Medical Center 1972 1974 Assistant Research Scientist, New York University Medical Center 1974 1982 Senior Scientist, Herzog-Ezrat Nashim Hospital 1980 1981 Visiting Expert, National Institutes of Health, Bethesda 1982 2010 Director of Research & Clinical Lab, Sarah Herzog-(Ezrath Nashim) Hospital 1991 1992 DAAD Fellow, Dept of Neurochemistry, Munich, Germany 1997 2002 Professor (Chaver-Adjunct), Ben-Gurion University 2001 2002 Visiting Professor, Hebrew University 2002 2010 Professor, Hebrew University 2010 2018 Professor, National University of Singapore CITATION ANALYSIS All Since 2014 Citations 28076 11207 h-index 88 53 i10-index 323 177 PUBLICATIONS Relating to Behavioral and Biological Economics and the Social Sciences 1. Y. Huang et al., “Successful aging, cognitive function, socioeconomic status, and leukocyte telomere length,” Psychoneuroendocrinology, vol. 103, pp. 180–187, 2019. 2. Zhong S, Shalev I, Koh D, Ebstein RP, Chew SH. Competitiveness and stress. Int Econ Rev (Philadelphia). 2018;59(3):1263-1281. 3. Yim O-S, Zhang X, Shalev I, Monakhov M, Zhong S, Hsu M, et al. Delay discounting, genetic sensitivity, and leukocyte telomere length. Proc Natl Acad Sci U S A. 2016;113(10). 4. Shen Q, Teo M, Winter E, Hart E, Chew SH, Ebstein RP. -
Identification of Ovarian Cancer Gene Expression Patterns Associated
ORIG I NAL AR TI CLE JOURNALSECTION IdentifiCATION OF Ovarian Cancer Gene Expression PATTERNS Associated WITH Disease Progression AND Mortality Md. Ali Hossain1,2 | Sheikh Muhammad Saiful Islam3 | Julian Quinn4 | Fazlul Huq5 | Mohammad Ali Moni4,5 1Dept OF CSE, ManarAT International UnivERSITY, Dhaka-1212, Bangladesh Ovarian CANCER (OC) IS A COMMON CAUSE OF DEATH FROM can- 2Dept OF CSE, Jahangirnagar UnivERSITY, CER AMONG WOMEN worldwide, SO THERE IS A PRESSING NEED SaVAR, Dhaka, Bangladesh TO IDENTIFY FACTORS INflUENCING MORTALITY. Much OC PATIENT 3Dept. OF Pharmacy, ManarAT International UnivERSITY, Dhaka-1212, Bangladesh CLINICAL DATA IS NOW PUBLICALLY ACCESSIBLE (including PATIENT 4Bone BIOLOGY divisions, Garvan Institute OF age, CANCER SITE STAGE AND SUBTYPE), AS ARE LARGE DATASETS OF Medical Research, SyDNEY, NSW 2010, OC GENE TRANSCRIPTION PROfiles. These HAVE ENABLED STUDIES AustrALIA CORRELATING OC PATIENT SURVIVAL WITH CLINICAL VARIABLES AND 5The UnivERSITY OF SyDNEY, SyDNEY Medical School, School OF Medical Science, WITH GENE EXPRESSION BUT IT IS NOT WELL UNDERSTOOD HOW THESE Discipline OF Biomedical Sciences, NSW TWO ASPECTS INTERACT TO INflUENCE MORTALITY. TO STUDY THIS 1825, AustrALIA WE INTEGRATED CLINICAL AND TISSUE TRANSCRIPTOME DATA FROM Correspondence THE SAME PATIENTS AVAILABLE FROM THE Broad Institute Cancer Dept OF CSE, Jahangirnagar UnivERSITY, Dhaka, Bangladesh Genome Atlas (TCGA) portal. WE INVESTIGATED OC mRNA The UnivERSITY OF SyDNEY, SyDNEY Medical EXPRESSION LEVELS (relativE TO NORMAL PATIENT TISSUE) OF 26 School, School OF Medical Science, Discipline OF Biomedical Sciences, NSW GENES ALREADY STRONGLY IMPLICATED IN OC, ASSESSED HOW THEIR 1825, AustrALIA EXPRESSION IN OC TISSUE PREDICTS PATIENT SURVIVAL THEN em- Email: al i :hossai n@manarat :ac:bd , mohammad :moni @sydney :eduau PLOYED CoX Proportional Hazard REGRESSION MODELS TO anal- YSE BOTH CLINICAL FACTORS AND TRANSCRIPTOMIC INFORMATION TO FUNDING INFORMATION DETERMINE RELATIVE RISK OF DEATH ASSOCIATED WITH EACH FACTOR. -
Integrative Genomics Discoveries and Development at the Center for Applied Genomics at CHOP
The Children’s Hospital of Philadelphia Integrative Genomics Discoveries and Development at The Center for Applied Genomics at CHOP Novel Genome-based Therapeutic Approaches Hakon Hakonarson, MD, PhD, Professor of Pediatrics CHOP’s Endowed Chair in Genetic Research Director, Center for Applied Genomics The Children’s Hospital of Philadelphia University of Pennsylvania, School of Medicine Duke Center for Applied Genomics and Precision Medicine 2019 Genomic and Precision Medicine Forum Nov 07, 2019 Genomics in the 21st Century Disclosures Dr. Hakonarson and CHOP own stock in Aevi Genomic Medicine Inc. developing anti-LIGHT therapy for IBD. Dr. Hakonarson is an inventor of technology involving therapeutic development of ADHD, GLA and HCCAA Novel Therapeutic Stem Cell/Gene Editing Approaches § iPS and stem cell therapy shows early promise § Gene therapy for LCA (RPE65) at CHOP via AAV § Targeted T cell therapy for cancer (UPENN/CHOP) § CRISPR-cas9 gene editing § Single cell sequencing The Center for Applied Genomics (CAG) at CHOP u Founded in June 2006 u Staff of 70 u Over 100 active disease projects with CHOP/Penn collaborators u TARGET: Genotype 100,000 children u ~450k GWAS samples >130k kids u IC - participation in future studies >85% u Database u Electronic Health Records u extensive information on each child u >1.2 million visits per year to Population Genomics Research CHOP Recruitment of CHOP/PENN HealthCare Network Patients u High-level of automation ADHD, Autism, Diabetes, IBD, Autoimmunity, Asthma/Atopy, Cancer, RDs - all high priority -
Human Lectins, Their Carbohydrate Affinities and Where to Find Them
biomolecules Review Human Lectins, Their Carbohydrate Affinities and Where to Review HumanFind Them Lectins, Their Carbohydrate Affinities and Where to FindCláudia ThemD. Raposo 1,*, André B. Canelas 2 and M. Teresa Barros 1 1, 2 1 Cláudia D. Raposo * , Andr1 é LAQVB. Canelas‐Requimte,and Department M. Teresa of Chemistry, Barros NOVA School of Science and Technology, Universidade NOVA de Lisboa, 2829‐516 Caparica, Portugal; [email protected] 12 GlanbiaLAQV-Requimte,‐AgriChemWhey, Department Lisheen of Chemistry, Mine, Killoran, NOVA Moyne, School E41 of ScienceR622 Co. and Tipperary, Technology, Ireland; canelas‐ [email protected] NOVA de Lisboa, 2829-516 Caparica, Portugal; [email protected] 2* Correspondence:Glanbia-AgriChemWhey, [email protected]; Lisheen Mine, Tel.: Killoran, +351‐212948550 Moyne, E41 R622 Tipperary, Ireland; [email protected] * Correspondence: [email protected]; Tel.: +351-212948550 Abstract: Lectins are a class of proteins responsible for several biological roles such as cell‐cell in‐ Abstract:teractions,Lectins signaling are pathways, a class of and proteins several responsible innate immune for several responses biological against roles pathogens. such as Since cell-cell lec‐ interactions,tins are able signalingto bind to pathways, carbohydrates, and several they can innate be a immuneviable target responses for targeted against drug pathogens. delivery Since sys‐ lectinstems. In are fact, able several to bind lectins to carbohydrates, were approved they by canFood be and a viable Drug targetAdministration for targeted for drugthat purpose. delivery systems.Information In fact, about several specific lectins carbohydrate were approved recognition by Food by andlectin Drug receptors Administration was gathered for that herein, purpose. plus Informationthe specific organs about specific where those carbohydrate lectins can recognition be found by within lectin the receptors human was body. -
(12) United States Patent (10) Patent No.: US 7.873,482 B2 Stefanon Et Al
US007873482B2 (12) United States Patent (10) Patent No.: US 7.873,482 B2 Stefanon et al. (45) Date of Patent: Jan. 18, 2011 (54) DIAGNOSTIC SYSTEM FOR SELECTING 6,358,546 B1 3/2002 Bebiak et al. NUTRITION AND PHARMACOLOGICAL 6,493,641 B1 12/2002 Singh et al. PRODUCTS FOR ANIMALS 6,537,213 B2 3/2003 Dodds (76) Inventors: Bruno Stefanon, via Zilli, 51/A/3, Martignacco (IT) 33035: W. Jean Dodds, 938 Stanford St., Santa Monica, (Continued) CA (US) 90403 FOREIGN PATENT DOCUMENTS (*) Notice: Subject to any disclaimer, the term of this patent is extended or adjusted under 35 WO WO99-67642 A2 12/1999 U.S.C. 154(b) by 158 days. (21)21) Appl. NoNo.: 12/316,8249 (Continued) (65) Prior Publication Data Swanson, et al., “Nutritional Genomics: Implication for Companion Animals'. The American Society for Nutritional Sciences, (2003).J. US 2010/O15301.6 A1 Jun. 17, 2010 Nutr. 133:3033-3040 (18 pages). (51) Int. Cl. (Continued) G06F 9/00 (2006.01) (52) U.S. Cl. ........................................................ 702/19 Primary Examiner—Edward Raymond (58) Field of Classification Search ................... 702/19 (74) Attorney, Agent, or Firm Greenberg Traurig, LLP 702/23, 182–185 See application file for complete search history. (57) ABSTRACT (56) References Cited An analysis of the profile of a non-human animal comprises: U.S. PATENT DOCUMENTS a) providing a genotypic database to the species of the non 3,995,019 A 1 1/1976 Jerome human animal Subject or a selected group of the species; b) 5,691,157 A 1 1/1997 Gong et al. -
Expression of Dopamine-Related Genes in Four Human Brain Regions
brain sciences Article Expression of Dopamine-Related Genes in Four Human Brain Regions Ansley Grimes Stanfill 1,* and Xueyuan Cao 2 1 Associate Professor and Associate Dean of Research, College of Nursing, University of Tennessee Health Science Center, Memphis, TN 38163, USA 2 Assistant Professor, College of Nursing, University of Tennessee Health Science Center, Memphis, TN 38163, USA; [email protected] * Correspondence: astanfi[email protected] Received: 1 July 2020; Accepted: 14 August 2020; Published: 18 August 2020 Abstract: A better understanding of dopaminergic gene expression will inform future treatment options for many different neurologic and psychiatric conditions. Here, we utilized the National Institutes of Health’s Genotype-Tissue Expression project (GTEx) dataset to investigate genotype by expression associations in seven dopamine pathway genes (ANKK1, DBH, DRD1, DRD2, DRD3, DRD5, and SLC6A3) in and across four human brain tissues (prefrontal cortex, nucleus accumbens, substantia nigra, and hippocampus). We found that age alters expression of DRD1 in the nucleus accumbens and prefrontal cortex, DRD3 in the nucleus accumbens, and DRD5 in the hippocampus and prefrontal cortex. Sex was associated with expression of DRD5 in substantia nigra and hippocampus, and SLC6A3 in substantia nigra. We found that three linkage disequilibrium blocks of SNPs, all located in DRD2, were associated with alterations in expression across all four tissues. These demographic characteristic associations and these variants should be further investigated for use in screening, diagnosis, and future treatment of neurological and psychiatric conditions. Keywords: dopamine; dopamine receptors; mesocortical; mesolimbic; nigrostrial; prefrontal cortex; nucleus accumbens; substantia nigra; hippocampus; human 1. Introduction Multiple neurological and psychiatric diseases result from alterations in the production, degradation, or improper signaling of dopamine in the brain.