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Molecular and Anatomical Analyses Reveal That Peronia Verruculata (Gastropoda: Onchidiidae) Is a Cryptic Species Complex
Contributions to Zoology, 87 (3) 149-165 (2018) Molecular and anatomical analyses reveal that Peronia verruculata (Gastropoda: Onchidiidae) is a cryptic species complex Jia Jin Marc Chang1,4, Ywee Chieh Tay2, Hui Ping Ang3, Karenne Phyu Phyu Tun3, Loke Ming Chou2, Rudolf Meier1,2, Danwei Huang1,2 1 Department of Biological Sciences, National University of Singapore, Singapore 117558, Singapore 2 Tropical Marine Science Institute, National University of Singapore, Singapore 119227, Singapore 3 National Biodiversity Centre, National Parks Board, Singapore 259569, Singapore 4 E-mail: [email protected] Keywords: DNA barcoding, cytochrome c oxidase subunit I (COI), scanning electron microscopy (SEM), cryptic diversity, integrative taxonomy, Singapore Abstract Introduction Recent years have seen an increase in the number of Species delimitation is the sine qua non for biology. studies that use DNA sequence information in addition to After all, what is defined as species often has material morphological methods, as the latter alone can be inadequate for morphologically similar, cryptic species. Marine onchidiid slugs implications on areas such as biodiversity conservation (Mollusca: Gastropoda: Onchidiidae), which commonly inhabit or invasive species management (Mace, 2004; intertidal environments and have a near-global distribution, Armstrong and Ball, 2005; Bickford et al., 2007; comprise 11 genera and 86 described species. Singapore has Hendrixon et al., 2015). Molecular evidence is becoming 19 recorded species of onchidiids with Peronia verruculata more important for taxonomic work (Hajibabaei et (Cuvier, 1830) being the most abundant. Here we present mitochondrial DNA sequence data from 63 P. verruculata- al., 2007; Kress et al., 2015; Meier et al., 2016). The like specimens to show that they constitute two closely-related technique of DNA barcoding, which is predicated on clades with distinct sequence signatures and a clear barcode gap. -
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Rec. West. Aust. Mus., Suppl. no. 11, 1981 CAMAENID LAND SNAILS FROM WESTERN AND CENTRAL AUSTRALIA (MOLLUSCA: PULMONATA: CAMAENIDAE) III TAXA FROM THE NINGBING RANGES AND NEARBY AREAS ALAN SOLEM* [Received 26 June 1979. Accepted 2 July 1980. Published 30 Apri11981.1 INTRODUCTION This is the third report on the semi-arid zone dominant land snails of Western and central Australia, which belong to the Camaenidae, sensu lato. It reviews 19 species-level taxa in four new genera, Ningbingia, Turgenitubulus, Cristilabrum and Prymnbriareus. Part I (Solem, 1979) covered the genera with trans-Australian northern distributions (Hadra Albers, 1860; Xanthomelon von Martens, 1860; Damochlora Iredale, 1938; and Torresitrachia Iredale, 1939), plus some related Chloritis-like genera from eastern Australia. Part 11 (see above) revised the genus Amplirhagada Iredale, 1933, which is restricted to the Kimberley and has undergone extensive complex speciation. Major financial sponsorship of this co-operative project between the Western Australian Museum, Perth (hereafter WAM) and Field Museum of Natural History, Chicago (hereafter FMNH) has been provided by National Science Foundation grants DEB 75-20113 and DEB 78-21444 to FMNH for fieldwork and subsequent study of collected materials, and National Science Foundation grant BMS 72-02149 that established a scanning electron microscope laboratory at FMNH. Grateful acknowledgment is made of this support. Nearly all line illustrations are by Elizabeth A. Liebman, formerly Illustrator, Division of Invertebrates. The map of collecting localities (Fig. 110) was drafted by Elizabeth Lizzio. Volunteer Illustrator, Division of Invertebrates. The pilaster details of Fig. 109 were prepared and. mounted by Marjorie M. Connors, Illustrator, Division of Invertebrates. -
Prioritising Threatened Species and Threatening Processes Across Northern Australia: User Guide for Data
Prioritising threatened species and threatening processes across northern Australia User guide for data by Anna Pintor, Mark Kennard, Jorge G. Álvarez-Romero and Stephanie Hernandez © James Cook University, 2019 Prioritising threatened species and threatening processes across northern Australia: User guide for data is licensed by James Cook University for use under a Creative Commons Attribution 4.0 Australia licence. For licence conditions see creativecommons.org/licenses/by/4.0 This report should be cited as: Pintor A,1 Kennard M,2 Álvarez-Romero JG,1,3 and Hernandez S.1 2019. Prioritising threatened species and threatening processes across northern Australia: User guide for data. James Cook University, Townsville. 1. James Cook University 2. Griffith University 3. ARC Centre of Excellence for Coral Reef Studies Cover photographs Front cover: Butler’s Dunnart is a threatened species which is found only on the Tiwi Islands in the Northern Territory, photo Alaric Fisher. Back cover: One of the spatially explicit maps created during this project. This report is available for download from the Northern Australia Environmental Resources (NAER) Hub website at nespnorthern.edu.au The Hub is supported through funding from the Australian Government’s National Environmental Science Program (NESP). The NESP NAER Hub is hosted by Charles Darwin University. ISBN 978-1-925800-44-9 December, 2019 Printed by Uniprint Contents Acronyms....................................................................................................................................vi -
Niiwalarra Islands and Lesueur Island
Niiwalarra Islands (Sir Graham Moore Islands) National Park and Lesueur Island Nature Reserve Joint management plan 2019 Management plan 93 Conservation and Parks Commission Department of Biodiversity, Conservation and Attractions Department of Biodiversity, Conservation and Attractions Parks and Wildlife Service 17 Dick Perry Avenue Technology Park, Western Precinct KENSINGTON WA 6151 Phone (08) 9219 9000 Fax (08) 9334 0498 dbca.wa.gov.au © State of Western Australia 2019 December 2019 ISBN 978-1-925978-03-2 (print) ISBN 978-1-921703-94-2 (online) WARNING: This plan may show photographs of, and refer to quotations from people who have passed away. This work is copyright. All traditional and cultural knowledge in this joint management plan is the cultural and intellectual property of Kwini Traditional Owners and is published with the consent of Balanggarra Aboriginal Corporation on their behalf. Written consent from Balanggarra Aboriginal Corporation must be obtained for use or reproduction of any such materials. Any unauthorised dealing may be in breach of the Copyright Act 1968 (Cth). All other non-traditional and cultural content in this joint management plan may be downloaded, displayed, printed and reproduced in unaltered form for personal use, non-commercial use or use within your organisation. Apart from any use as permitted under the Copyright Act 1968, all other rights are reserved. Requests and enquiries concerning reproduction and rights should be addressed to the Department of Biodiversity, Conservation and Attractions. NB: The spelling of some of the words for country, and species of plants and animals in language are different in various documents. This is primarily due to the fact that establishing a formal and consistent ‘sounds for spelling’ system for a language that did not have a written form takes time to develop and refine. -
BS4 Marra Mamba Targeted Fauna Survey V2.2.Docx 3
Brockman Syncline 4 Marra Mamba Targeted Fauna Survey Prepared for Rio Tinto March 2013 Brockman Syncline 4 Marra Mamba Targeted Fauna Survey © Biota Environmental Sciences Pty Ltd 2013 ABN 49 092 687 119 Level 1, 228 Carr Place Leederville Western Australia 6007 Ph: (08) 9328 1900 Fax: (08) 9328 6138 Project No.: 817 Prepared by: David Keirle Zoë Hamilton Penny Brooshooft Document Quality Checking History Version: 1.3 Peer review: Nicola Watson Version: 2.2 Director review: Garth Humphreys Version: 2.2 Format review: Fiona Hedley Approved for issue: Garth Humphreys This document has been prepared to the requirements of the client identified on the cover page and no representation is made to any third party. It may be cited for the purposes of scientific research or other fair use, but it may not be reproduced or distributed to any third party by any physical or electronic means without the express permission of the client for whom it was prepared or Biota Environmental Sciences Pty Ltd. This report has been designed for double-sided printing. Hard copies supplied by Biota are printed on recycled paper. Cube:Current:817 (Marra Mamba Fauna):Documents:BS4 Marra Mamba Targeted Fauna Survey v2.2.docx 3 Brockman Syncline 4 Marra Mamba Targeted Fauna Survey 4 Cube:Current:817 (Marra Mamba Fauna):Documents:BS4 Marra Mamba Targeted Fauna Survey v2.2.docx Brockman Syncline 4 Marra Mamba Targeted Fauna Survey Brockman Syncline 4 Marra Mamba Targeted Fauna Survey Contents 1.0 Summary 9 1.1 Introduction 9 1.2 Methodology 9 1.3 Results 10 1.4 Conservation -
Short-Range Endemic Invertebrate Fauna Impact Assessment
Miralga Creek: SRE Invertebrate Fauna Impact Assessment Miralga Creek Project: Short-Range Endemic Invertebrate Fauna Impact Assessment Biologic Environmental Survey DRAFT Report to Atlas Iron Ltd February 2020 Miralga Creek: SRE Invertebrate Fauna Impact Assessment DOCUMENT STATUS Version Review / Approved for Approved for Issue to Author No. Issue Name Date N. Gunawardene, 1 M. Lythe, T. Wild Monica Goggin 01/02/2020 B. Durrant 2 N. Gunawardene B. Durrant Monica Goggin 20/02/2020 F. Jones, M. 3 M. Lythe N. Gunawardene 26/02/2020 Goggin IMPORTANT NOTE Apart from fair dealing for the purposes of private study, research, criticism, or review as permitted under the Copyright Act, no part of this report, its attachments or appendices may be reproduced by any process without the written consent of Biologic Environmental Survey Pty Ltd (“Biologic”). All enquiries should be directed to Biologic. We have prepared this report for the sole purposes of Atlas Iron Pty Ltd (“Client”) for the specific purpose only for which it is supplied. This report is strictly limited to the Purpose and the facts and matters stated in it do not apply directly or indirectly and will not be used for any other application, purpose, use or matter. In preparing this report we have made certain assumptions. We have assumed that all information and documents provided to us by the Client or as a result of a specific request or enquiry were complete, accurate and up to date. Where we have obtained information from a government register or database, we have assumed that the information is accurate. -
Biodiversity Summary: Cape York, Queensland
Biodiversity Summary for NRM Regions Species List What is the summary for and where does it come from? This list has been produced by the Department of Sustainability, Environment, Water, Population and Communities (SEWPC) for the Natural Resource Management Spatial Information System. The list was produced using the AustralianAustralian Natural Natural Heritage Heritage Assessment Assessment Tool Tool (ANHAT), which analyses data from a range of plant and animal surveys and collections from across Australia to automatically generate a report for each NRM region. Data sources (Appendix 2) include national and state herbaria, museums, state governments, CSIRO, Birds Australia and a range of surveys conducted by or for DEWHA. For each family of plant and animal covered by ANHAT (Appendix 1), this document gives the number of species in the country and how many of them are found in the region. It also identifies species listed as Vulnerable, Critically Endangered, Endangered or Conservation Dependent under the EPBC Act. A biodiversity summary for this region is also available. For more information please see: www.environment.gov.au/heritage/anhat/index.html Limitations • ANHAT currently contains information on the distribution of over 30,000 Australian taxa. This includes all mammals, birds, reptiles, frogs and fish, 137 families of vascular plants (over 15,000 species) and a range of invertebrate groups. Groups notnot yet yet covered covered in inANHAT ANHAT are notnot included included in in the the list. list. • The data used come from authoritative sources, but they are not perfect. All species names have been confirmed as valid species names, but it is not possible to confirm all species locations. -
Rangelands, Western Australia
Biodiversity Summary for NRM Regions Species List What is the summary for and where does it come from? This list has been produced by the Department of Sustainability, Environment, Water, Population and Communities (SEWPC) for the Natural Resource Management Spatial Information System. The list was produced using the AustralianAustralian Natural Natural Heritage Heritage Assessment Assessment Tool Tool (ANHAT), which analyses data from a range of plant and animal surveys and collections from across Australia to automatically generate a report for each NRM region. Data sources (Appendix 2) include national and state herbaria, museums, state governments, CSIRO, Birds Australia and a range of surveys conducted by or for DEWHA. For each family of plant and animal covered by ANHAT (Appendix 1), this document gives the number of species in the country and how many of them are found in the region. It also identifies species listed as Vulnerable, Critically Endangered, Endangered or Conservation Dependent under the EPBC Act. A biodiversity summary for this region is also available. For more information please see: www.environment.gov.au/heritage/anhat/index.html Limitations • ANHAT currently contains information on the distribution of over 30,000 Australian taxa. This includes all mammals, birds, reptiles, frogs and fish, 137 families of vascular plants (over 15,000 species) and a range of invertebrate groups. Groups notnot yet yet covered covered in inANHAT ANHAT are notnot included included in in the the list. list. • The data used come from authoritative sources, but they are not perfect. All species names have been confirmed as valid species names, but it is not possible to confirm all species locations. -
View Preprint
An ontogenetic perspective on the evolution of shell size and shell shape in the land snail genus Plectostoma (unpublished manuscript) Thor-Seng Liew and Menno Schilthuizen 1 Institute Biology Leiden, Leiden University, P.O. Box 9516, 2300 RA Leiden, The Netherlands. 2 Naturalis Biodiversity Center, P.O. Box 9517, 2300 RA Leiden, The Netherlands. s 3 Institute for Tropical Biology and Conservation, Universiti Malaysia Sabah, Jalan UMS, t n 88400, Kota Kinabalu, Sabah, Malaysia. i r Email: T-S L: [email protected] P MS: [email protected] e r P Author Contributions Conceived and designed the experiments: LTS. Performed the experiments: LTS. Analyzed the data: LTS. Contributed reagents/materials/analysis tools: LTS MS. Wrote the paper: LTS MS. Supplementary Information (https://drive.google.com/a/naturalis.nl/#folders/0BwCpl3C2XSo9Zi1mQ0swal9xelU) PeerJ PrePrints | http://dx.doi.org/10.7287/peerj.preprints.420v1 | CC-BY 4.0 Open Access | received: 24 Jun 2014, published: 24 Jun 2014 1 Abstract The rampant convergent and parallel evolution in shell form in the Gastropoda is well known. Many studies focus on the functional drivers which have been regarded as a major force in shell evolution. There is, however, a scarcity in studies that aim at understanding shell form evolution with respect to their ontogeny. Hence, we investigated the evolution of shell form in the micro-landsnail genus Plectostoma (Diplommatinidae) from the viewpoint of shell ontogeny. We examined the aperture ontogeny profiles that describe how aperture form and growth trajectory change along the shell ontogeny, and how the aperture ontogeny profiles relate to the observed shell forms. -
Biodiversity Summary: Rangelands, Western Australia
Biodiversity Summary for NRM Regions Guide to Users Background What is the summary for and where does it come from? This summary has been produced by the Department of Sustainability, Environment, Water, Population and Communities (SEWPC) for the Natural Resource Management Spatial Information System. It highlights important elements of the biodiversity of the region in two ways: • Listing species which may be significant for management because they are found only in the region, mainly in the region, or they have a conservation status such as endangered or vulnerable. • Comparing the region to other parts of Australia in terms of the composition and distribution of its species, to suggest components of its biodiversity which may be nationally significant. The summary was produced using the Australian Natural Natural Heritage Heritage Assessment Assessment Tool Tool (ANHAT), which analyses data from a range of plant and animal surveys and collections from across Australia to automatically generate a report for each NRM region. Data sources (Appendix 2) include national and state herbaria, museums, state governments, CSIRO, Birds Australia and a range of surveys conducted by or for DEWHA. Limitations • ANHAT currently contains information on the distribution of over 30,000 Australian taxa. This includes all mammals, birds, reptiles, frogs and fish, 137 families of vascular plants (over 15,000 species) and a range of invertebrate groups. The list of families covered in ANHAT is shown in Appendix 1. Groups notnot yet yet covered covered in inANHAT ANHAT are are not not included included in the in the summary. • The data used for this summary come from authoritative sources, but they are not perfect. -
Light Industrial Area, Workers' Accommodation
OCTOBER2012 WOODSIDEENERGYLTD JAMESPRICEPOINT:LIGHTINDUSTRIALAREA,WORKERS’ ACCOMMODATIONCAMPANDSOUTHERNPIPELINE SHORTRANGEENDEMICINVERTEBRATEFAUNAASSESSMENT Thispagehasbeenleftblankintentionally WOODSIDE ENERGY LTD JAMES PRICE POINT: LIGHT INDUSTRIAL AREA, WORKERS’ ACCOMMODATION CAMP AND SOUTHERN PIPELINE SHORT RANGE ENDEMIC INVERTEBRATE FAUNA ASSESSMENT REV D OCTOBER 2012 Woodside Energy Ltd James Price Point: Light Industrial Area, Workers’ Accommodation and Southern Pipeline Short Range Endemic Invertebrate Fauna Assessment ecologia Environment (2012). Reproduction of this report in whole or in part by electronic, mechanical or chemical means including photocopying, recording or by any information storage and retrieval system, in any language, is strictly prohibited without the express approval of Woodside Energy Ltd and/or ecologia Environment. Restrictions on Use This report has been prepared specifically for Woodside Energy Ltd. Neither the report nor its contents may be referred to or quoted in any statement, study, report, application, prospectus, loan, or other agreement document (with the exception of when this document is required to be publicly released as part of a statutory approval process), without the express approval of Woodside Energy Ltd and/or ecologia Environment. ecologia Environment 1025 Wellington Street WEST PERTH WA 6005 Phone: 08 9322 1944 Fax: 08 9322 1599 Email: [email protected] November 2012 i WoodsideEnergyLtd JamesPricePoint:LightIndustrialArea,Workers’AccommodationandSouthernPipeline -
Molecular Phylogenetics and Comparative Anatomy Of
Contributions to Zoology, 83 (4) 245-267 (2014) Molecular phylogenetics and comparative anatomy of Kimberleytrachia Köhler, 2011 – a genus of land snail endemic to the coastal Kimberley, Western Australia with description of new taxa (Gastropoda, Camaenidae) Francesco Criscione1, Frank Köhler1, 2 1 Australian Museum, 6 College Street, Sydney NSW 2010, Australia 2 E-mail: [email protected] Key words: genetic distances, Helicoidea, mitochondrial DNA, new species, Stylommatophora Abstract Acknowledgements ...................................................................... 256 Kimberleytrachia Köhler, 2011 is a genus of camaenid land snail References ...................................................................................... 256 endemic to the Western Australian Kimberley region. It com- Appendix ........................................................................................ 259 prises twelve previously recognised species, all of which occur within the high precipitation zone along the north-western coast between the Admiralty Gulf and King Sound and within less than about 50 km distance from the coast. By evaluating the Introduction variation in shell and genital anatomy as well as the differentia- tion in the mitochondrial markers 16S and COI, we assess the The Kimberley Region, a comparatively pristine region monophyly of Kimberleytrachia with respect to other camaenid in Western Australia has yet widely escaped the impacts genera from north-western Australia. In addition, we newly of urban, industrial and agricultural development due describe six species (K. jacksonensis n. sp., K. leopardus n. sp., K. nelsonensis n. sp., K. serrata n. sp., K. setosa n. sp. and K. to its remoteness and rugged terrain. As a result, the silvaepluvialis n. sp.) based on comparative morphology and Kimberley is an area of high significance for natural mitochondrial DNA differentiation. We found that a rather heritage conservation across terrestrial and marine smooth, weakly elevated shell and, in particular, the complex environments.