Zoologische Verhandelingen
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Abundance and Clonal Replication in the Tropical Corallimorpharian Rhodactis Rhodostoma
Invertebrate Biology 119(4): 351-360. 0 2000 American Microscopical Society, Inc. Abundance and clonal replication in the tropical corallimorpharian Rhodactis rhodostoma Nanette E. Chadwick-Furmana and Michael Spiegel Interuniversity Institute for Marine Science, PO. Box 469, Eilat, Israel, and Faculty of Life Sciences, Bar Ilan University, Ramat Gan, Israel Abstract. The corallimorpharian Rhodactis rhodostoma appears to be an opportunistic species capable of rapidly monopolizing patches of unoccupied shallow substrate on tropical reefs. On a fringing coral reef at Eilat, Israel, northern Red Sea, we examined patterns of abundance and clonal replication in R. rhodostoma in order to understand the modes and rates of spread of polyps across the reef flat. Polyps were abundant on the inner reef flat (maximum 1510 polyps m-* and 69% cover), rare on the outer reef flat, and completely absent on the outer reef slope at >3 m depth. Individuals cloned throughout the year via 3 distinct modes: longitudinal fission, inverse budding, and marginal budding. Marginal budding is a replicative mode not previously described. Cloning mode varied significantly with polyp size. Approximately 9% of polyps cloned each month, leading to a clonal doubling time of about 1 year. The rate of cloning varied seasonally and depended on day length and seawater temperature, except for a brief reduction in cloning during midsummer when polyps spawned gametes. Polyps of R. rhodo- stoma appear to have replicated extensively following a catastrophic low-tide disturbance in 1970, and have become an alternate dominant to stony corals on parts of the reef flat. Additional key words: Cnidaria, coral reef, sea anemone, asexual reproduction, Red Sea Soft-bodied benthic cnidarians such as sea anemo- & Chadwick-Furman 1999a). -
The Earliest Diverging Extant Scleractinian Corals Recovered by Mitochondrial Genomes Isabela G
www.nature.com/scientificreports OPEN The earliest diverging extant scleractinian corals recovered by mitochondrial genomes Isabela G. L. Seiblitz1,2*, Kátia C. C. Capel2, Jarosław Stolarski3, Zheng Bin Randolph Quek4, Danwei Huang4,5 & Marcelo V. Kitahara1,2 Evolutionary reconstructions of scleractinian corals have a discrepant proportion of zooxanthellate reef-building species in relation to their azooxanthellate deep-sea counterparts. In particular, the earliest diverging “Basal” lineage remains poorly studied compared to “Robust” and “Complex” corals. The lack of data from corals other than reef-building species impairs a broader understanding of scleractinian evolution. Here, based on complete mitogenomes, the early onset of azooxanthellate corals is explored focusing on one of the most morphologically distinct families, Micrabaciidae. Sequenced on both Illumina and Sanger platforms, mitogenomes of four micrabaciids range from 19,048 to 19,542 bp and have gene content and order similar to the majority of scleractinians. Phylogenies containing all mitochondrial genes confrm the monophyly of Micrabaciidae as a sister group to the rest of Scleractinia. This topology not only corroborates the hypothesis of a solitary and azooxanthellate ancestor for the order, but also agrees with the unique skeletal microstructure previously found in the family. Moreover, the early-diverging position of micrabaciids followed by gardineriids reinforces the previously observed macromorphological similarities between micrabaciids and Corallimorpharia as -
Ibdiocc- Scor Wg
PROPOSAL FOR IBDIOCC- SCOR WG Submitted to: Dr. Edward Urban, Executive Secretary, Scientific Committee for Oceanic Research (SCOR) Submitted by: Dr. Robert Y. George, President, George Institute for Biodiversity and Sustainability (GIBS), 1320 Vanagrif Ct., Wake Forest, North Carolina. Date of Submission: April 15, 2016. IBDIOCC Interaction Between Drivers Impacting Ocean Carbonate Chemistry: How can Deep-Sea Coral Ecosystems respond to ASH/CSH Shoaling in Seamounts that pose imminent threats from Ocean Acidification? Summary/Abstract: We propose a new SCOR Working Group IBDIOCC (2017 to 2019) that seeks to assess new impacts on seamount ecosystems from ocean acidification (OA), that essentially looks at the impact of shoaling of ASH and CSH on the biota that include communities/species associated with deep sea scleractinian corals e.g. Lophelia pertusa and Solenosmilia variabilis) The WG, with members from both southern and northern hemispheres, seeks to re-evaluate and augment the science priorities defined in 2012 by the Census of the Marine Life, but taking into account the new climate change threats and challenges from shifts in ocean carbonate chemistry. The WG will incorporate recommendations from ‘Ocean In High Carbon World-Ocean Acidification international symposium which will be participated by Dr. George (chairman of WG) who will also present a paper on vulnerable deep sea ecosystems to ocean carbonate chemistry, especially seamounts southeast of Australia and New Zealand. The WG plans to develop a follow-on capacity building workshop in the ASLO annual meeting in Hawaii (2017) and in the AGU Ocean Sciences meeting in Portland, Oregon (2018). In 2017, the WG will meet for three days in 2017 at the ASLO annual meeting to generate two open-access publications; 1) the first global assessment of OA on seamount fauna, and 2) a peer-reviewed multi-authored paper to be submitted to NATURE CLIMATE. -
CNIDARIA Corals, Medusae, Hydroids, Myxozoans
FOUR Phylum CNIDARIA corals, medusae, hydroids, myxozoans STEPHEN D. CAIRNS, LISA-ANN GERSHWIN, FRED J. BROOK, PHILIP PUGH, ELLIOT W. Dawson, OscaR OcaÑA V., WILLEM VERvooRT, GARY WILLIAMS, JEANETTE E. Watson, DENNIS M. OPREsko, PETER SCHUCHERT, P. MICHAEL HINE, DENNIS P. GORDON, HAMISH J. CAMPBELL, ANTHONY J. WRIGHT, JUAN A. SÁNCHEZ, DAPHNE G. FAUTIN his ancient phylum of mostly marine organisms is best known for its contribution to geomorphological features, forming thousands of square Tkilometres of coral reefs in warm tropical waters. Their fossil remains contribute to some limestones. Cnidarians are also significant components of the plankton, where large medusae – popularly called jellyfish – and colonial forms like Portuguese man-of-war and stringy siphonophores prey on other organisms including small fish. Some of these species are justly feared by humans for their stings, which in some cases can be fatal. Certainly, most New Zealanders will have encountered cnidarians when rambling along beaches and fossicking in rock pools where sea anemones and diminutive bushy hydroids abound. In New Zealand’s fiords and in deeper water on seamounts, black corals and branching gorgonians can form veritable trees five metres high or more. In contrast, inland inhabitants of continental landmasses who have never, or rarely, seen an ocean or visited a seashore can hardly be impressed with the Cnidaria as a phylum – freshwater cnidarians are relatively few, restricted to tiny hydras, the branching hydroid Cordylophora, and rare medusae. Worldwide, there are about 10,000 described species, with perhaps half as many again undescribed. All cnidarians have nettle cells known as nematocysts (or cnidae – from the Greek, knide, a nettle), extraordinarily complex structures that are effectively invaginated coiled tubes within a cell. -
Species Delimitation in Sea Anemones (Anthozoa: Actiniaria): from Traditional Taxonomy to Integrative Approaches
Preprints (www.preprints.org) | NOT PEER-REVIEWED | Posted: 10 November 2019 doi:10.20944/preprints201911.0118.v1 Paper presented at the 2nd Latin American Symposium of Cnidarians (XVIII COLACMAR) Species delimitation in sea anemones (Anthozoa: Actiniaria): From traditional taxonomy to integrative approaches Carlos A. Spano1, Cristian B. Canales-Aguirre2,3, Selim S. Musleh3,4, Vreni Häussermann5,6, Daniel Gomez-Uchida3,4 1 Ecotecnos S. A., Limache 3405, Of 31, Edificio Reitz, Viña del Mar, Chile 2 Centro i~mar, Universidad de Los Lagos, Camino a Chinquihue km. 6, Puerto Montt, Chile 3 Genomics in Ecology, Evolution, and Conservation Laboratory, Facultad de Ciencias Naturales y Oceanográficas, Universidad de Concepción, P.O. Box 160-C, Concepción, Chile. 4 Nucleo Milenio de Salmonidos Invasores (INVASAL), Concepción, Chile 5 Huinay Scientific Field Station, P.O. Box 462, Puerto Montt, Chile 6 Escuela de Ciencias del Mar, Pontificia Universidad Católica de Valparaíso, Avda. Brasil 2950, Valparaíso, Chile Abstract The present review provides an in-depth look into the complex topic of delimiting species in sea anemones. For most part of history this has been based on a small number of variable anatomic traits, many of which are used indistinctly across multiple taxonomic ranks. Early attempts to classify this group succeeded to comprise much of the diversity known to date, yet numerous taxa were mostly characterized by the lack of features rather than synapomorphies. Of the total number of species names within Actiniaria, about 77% are currently considered valid and more than half of them have several synonyms. Besides the nominal problem caused by large intraspecific variations and ambiguously described characters, genetic studies show that morphological convergences are also widespread among molecular phylogenies. -
The State of Knowledge of Deep-Sea Corals in the New Zealand Region Di Tracey1 and Freya Hjorvarsdottir2 (Eds, Comps) © 2019
The state of knowledge of deep-sea corals in the New Zealand region Di Tracey1 and Freya Hjorvarsdottir2 (eds, comps) © 2019. All rights reserved. The copyright for this report, and for the data, maps, figures and other information (hereafter collectively referred to as “data”) contained in it, is held by NIWA is held by NIWA unless otherwise stated. This copyright extends to all forms of copying and any storage of material in any kind of information retrieval system. While NIWA uses all reasonable endeavours to ensure the accuracy of the data, NIWA does not guarantee or make any representation or warranty (express or implied) regarding the accuracy or completeness of the data, the use to which the data may be put or the results to be obtained from the use of the data. Accordingly, NIWA expressly disclaims all legal liability whatsoever arising from, or connected to, the use of, reference to, reliance on or possession of the data or the existence of errors therein. NIWA recommends that users exercise their own skill and care with respect to their use of the data and that they obtain independent professional advice relevant to their particular circumstances. NIWA SCIENCE AND TECHNOLOGY SERIES NUMBER 84 ISSN 1173-0382 Citation for full report: Tracey, D.M. & Hjorvarsdottir, F. (eds, comps) (2019). The State of Knowledge of Deep-Sea Corals in the New Zealand Region. NIWA Science and Technology Series Number 84. 140 p. Recommended citation for individual chapters (e.g., for Chapter 9.: Freeman, D., & Cryer, M. (2019). Current Management Measures and Threats, Chapter 9 In: Tracey, D.M. -
Spectral Diversity of Fluorescent Proteins from the Anthozoan Corynactis Californica
Mar Biotechnol (2008) 10:328–342 DOI 10.1007/s10126-007-9072-7 ORIGINAL ARTICLE Spectral Diversity of Fluorescent Proteins from the Anthozoan Corynactis californica Christine E. Schnitzler & Robert J. Keenan & Robert McCord & Artur Matysik & Lynne M. Christianson & Steven H. D. Haddock Received: 7 September 2007 /Accepted: 19 November 2007 /Published online: 11 March 2008 # Springer Science + Business Media, LLC 2007 Abstract Color morphs of the temperate, nonsymbiotic three to four distinct genetic loci that code for these colors, corallimorpharian Corynactis californica show variation in and one morph contains at least five loci. These genes pigment pattern and coloring. We collected seven distinct encode a subfamily of new GFP-like proteins, which color morphs of C. californica from subtidal locations in fluoresce across the visible spectrum from green to red, Monterey Bay, California, and found that tissue– and color– while sharing between 75% to 89% pairwise amino-acid morph-specific expression of at least six different genes is identity. Biophysical characterization reveals interesting responsible for this variation. Each morph contains at least spectral properties, including a bright yellow protein, an orange protein, and a red protein exhibiting a “fluorescent timer” phenotype. Phylogenetic analysis indicates that the Christine E. Schnitzler and Robert J. Keenan contributed equally to FP genes from this species evolved together but that this work. diversification of anthozoan fluorescent proteins has taken Data deposition footnote: -
The Cnidae of the Acrospheres of the Corallimorpharian Corynactis Carnea (Studer, 1878) (Cnidaria, Corallimorpharia, Corallimorp
Belg. J. Zool., 139 (1) : 50-57 January 2009 The cnidae of the acrospheres of the corallimorpharian Corynactis carnea (Studer, 1878) (Cnidaria, Corallimorpharia, Corallimorphidae): composition, abundance and biometry Fabián H. Acuña 1 & Agustín Garese Departamento de Ciencias Marinas. Facultad de Ciencias Exactas y Naturales. Universidad Nacional de Mar del Plata. Funes 3250. 7600 Mar del Plata. Argentina. 1 Researcher of CONICET. Corresponding author : [email protected] ABSTRACT. Corynactis carnea is a common corallimorpharian in the southwestern Atlantic Ocean, particularly in the Argentine Sea, and possesses spherical structures called acrospheres at the tips of its tentacles, characterized by particular cnidae. Twelve specimens were collected to identify and measure the types of cnidae present in the acrospheres, to estimate their abundance and to study the biometry of the different types. The cnidae of the acrospheres are spirocysts, holotrichs, two types of microbasic b-mas- tigophores and two types of microbasic p-mastigophores. Spirocysts were the most abundant type, followed by microbasic p-mas- tigophores and microbasic b-mastigophores; holotrichs were the least abundant. The size of only the spirocysts fitted well to a nor- mal distribution; the other types fitted to a gamma distribution. A high variability in length was observed for each type of cnida. R statistical software was employed for statistical treatments. The cnidae of the acrospheres of C. carnea are compared with those of other species of the genus . KEY WORDS : cnidocysts, biometry, acrospheres, Corallimorpharia, Argentina. INTRODUCTION daria. They vary in terms of their morphology and their functions, which include defence, aggression, feeding and The Corallimorpharia form a relatively small, taxo- larval settlement (F RANCIS , 2004). -
Tentacle Morphological Variation Coincides with Differential Expression of Toxins in Sea Anemones
toxins Article Tentacle Morphological Variation Coincides with Differential Expression of Toxins in Sea Anemones Lauren M. Ashwood 1,* , Michela L. Mitchell 2,3,4,5 , Bruno Madio 6, David A. Hurwood 1,7, Glenn F. King 6,8 , Eivind A. B. Undheim 9,10,11 , Raymond S. Norton 2,12 and Peter J. Prentis 1,7 1 School of Biology and Environmental Science, Faculty of Science, Queensland University of Technology, Brisbane, QLD 4000, Australia; [email protected] (D.A.H.); [email protected] (P.J.P.) 2 Medicinal Chemistry, Monash Institute of Pharmaceutical Sciences, Monash University, 381 Royal Parade, Parkville, VIC 3052, Australia; [email protected] (M.L.M.); [email protected] (R.S.N.) 3 Sciences Department, Museum Victoria, G.P.O. Box 666, Melbourne, VIC 3001, Australia 4 Queensland Museum, P.O. Box 3000, South Brisbane, QLD 4101, Australia 5 Bioinformatics Division, Walter & Eliza Hall Institute of Research, 1G Royal Parade, Parkville, VIC 3052, Australia 6 Institute for Molecular Bioscience, The University of Queensland, St Lucia, QLD 4072, Australia; [email protected] (B.M.); [email protected] (G.F.K.) 7 Centre for Agriculture and the Bioeconomy, Queensland University of Technology, Brisbane, QLD 4000, Australia 8 ARC Centre for Innovations in Peptide and Protein Science, The University of Queensland, St Lucia, QLD 4072, Australia 9 Centre for Advanced Imaging, The University of Queensland, St Lucia, QLD 4072, Australia; [email protected] 10 Centre for Biodiversity Dynamics, Department of Biology, Norwegian University of Science and Technology, NO-7491 Trondheim, Norway 11 Centre for Ecological and Evolutionary Synthesis, Department of Biosciences, University of Oslo, Blindern, NO-0316 Oslo, Norway Citation: Ashwood, L.M.; Mitchell, 12 ARC Centre for Fragment-Based Design, Monash University, Parkville, VIC 3052, Australia M.L.; Madio, B.; Hurwood, D.A.; * Correspondence: [email protected] King, G.F.; Undheim, E.A.B.; Norton, R.S.; Prentis, P.J. -
The Mitochondrial Genome of the Sea Anemone Stichodactyla Haddoni Reveals Catalytic Introns, Insertion-Like Element, and Unexpected Phylogeny
life Article The Mitochondrial Genome of the Sea Anemone Stichodactyla haddoni Reveals Catalytic Introns, Insertion-Like Element, and Unexpected Phylogeny Steinar Daae Johansen 1,2,*, Sylvia I. Chi 3, Arseny Dubin 1 and Tor Erik Jørgensen 1 1 Faculty of Biosciences and Aquaculture, Nord University, 8049 Bodø, Norway; [email protected] (A.D.); [email protected] (T.E.J.) 2 Department of Medical Biology, Faculty of Health Sciences, UiT—The Arctic University of Norway, 9037 Tromsø, Norway 3 Centre for Innovation, Canadian Blood Services, Ottawa, ON K1G 4J5, Canada; [email protected] * Correspondence: [email protected] Abstract: A hallmark of sea anemone mitochondrial genomes (mitogenomes) is the presence of complex catalytic group I introns. Here, we report the complete mitogenome and corresponding tran- scriptome of the carpet sea anemone Stichodactyla haddoni (family Stichodactylidae). The mitogenome is vertebrate-like in size, organization, and gene content. Two mitochondrial genes encoding NADH dehydrogenase subunit 5 (ND5) and cytochrome c oxidase subunit I (COI) are interrupted with complex group I introns, and one of the introns (ND5-717) harbors two conventional mitochondrial genes (ND1 and ND3) within its sequence. All the mitochondrial genes, including the group I introns, are expressed at the RNA level. Nonconventional and optional mitochondrial genes are present in Citation: Johansen, S.D.; Chi, S.I.; the mitogenome of S. haddoni. One of these gene codes for a COI-884 intron homing endonuclease Dubin, A.; Jørgensen, T.E. The Mitochondrial Genome of the Sea and is organized in-frame with the upstream COI exon. The insertion-like orfA is expressed as RNA Anemone Stichodactyla haddoni and translocated in the mitogenome as compared with other sea anemones. -
National Taxonomic Collections in New Zealand 2015
National Taxonomic Collections in New Zealand December 2015 Cover image: Close-up detail of Corallimorphus niwa Fautin, 2011. This unusual animal is between a sea anemone and a coral, featuring short rounded tentacles and a slit-like mouth. It was collected in 2007 on the Chatham Rise from its muddy deep-sea habitat as part of the Ocean Survey 20/20 Chatham / Challenger Biodiversity and Seabed Habitat Project, jointly funded by the New Zealand Ministry of Fisheries, Land Information New Zealand, National Institute of Water & Atmospheric Research (NIWA), and Department of Conservation. It was described as a new species in 2011 by Dr Daphne Fautin from the University of Kansas, following a visit to the NIWA Invertebrate Collection in 2008. Image credit: Owen Anderson, NIWA. Ocean Survey 20/20 Chatham / Challenger Biodiversity and Seabed Habitat Project. 1 A message from the President of the Royal Society of New Zealand It gives me great pleasure to release this report by the Royal Society of New Zealand’s Expert Panel on National Taxonomic Collections in New Zealand. Taxonomy - the essential science that identifies and names New Zealand’s diverse flora and fauna, and determines what is native and not native to New Zealand - is intrinsic to preserving biological heritage. New Zealanders’ national identity, economic prosperity, environmental management and health and wellbeing depend on this science along with the many millions of specimens in the collections that record this country’s flora and fauna. This report brings together a very wide range of inter-disciplinary evidence about the current state and future potential of our taxonomic collections and proposes what is needed to ensure they can continue to serve New Zealanders into the future. -
Fishery Ecosystem Plan II Live/Hardbottom Habitat March 2018
Fishery Ecosystem Plan II Live/Hardbottom Habitat March 2018 Summary The continental shelf off the southeastern United States, commonly called the South Atlantic Bight (SAB), extends from Cape Hatteras, North Carolina, to Cape Canaveral, Florida (or according to some researchers, to West Palm Beach, Florida). The northern part of the SAB is known as the Carolina Capes Region, while the middle and southern areas are called the Georgia Embayment, or Georgia Bight. The Carolina Capes Region is characterized by complex topography. The prominent shoals there extend to the shelf break and are effective in trapping Gulf Stream eddies, whereas the Georgia Embayment to the south is smoother. Shelf widths of the South Atlantic Bight vary from just a few kilometers off West Palm Beach, FL, to a maximum of 120 km off Brunswick and Savannah, Georgia. Gently sloping shelves (about 1m/km) can be divided into the following zones based on depth. The shallowest is the nearshore zone (0-5m) followed by the inner-shelf zone (5-20 m, 16-66 ft.), which is dominated by tidal currents, river runoff, local wind forcing and seasonal atmospheric changes (Table 1). The mid-shelf zone (20-30 m, 66-98 ft.) is dominated by winds but influenced by the Gulf Stream. Stratification of the water column changes seasonally; mixed conditions, in general, characterize fall and winter while vertical stratification prevails during spring and summer. Strong stratification allows offshore upwelled waters to advect farther onshore near the bottom and, at the same time, facilitates offshore spreading of lower-salinity water in surface layer.