Young, L.J., & Hammock E.A.D. (2007)
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High Levels of Gene Flow in the California Vole (Microtus Californicus) Are Consistent Across Spatial Scales," Western North American Naturalist: Vol
Western North American Naturalist Volume 70 Number 3 Article 3 10-11-2010 High levels of gene flow in the California olev (Microtus californicus) are consistent across spatial scales Rachel I. Adams Stanford University, Stanford, California, [email protected] Elizabeth A. Hadly Stanford University, Stanford, California, [email protected] Follow this and additional works at: https://scholarsarchive.byu.edu/wnan Recommended Citation Adams, Rachel I. and Hadly, Elizabeth A. (2010) "High levels of gene flow in the California vole (Microtus californicus) are consistent across spatial scales," Western North American Naturalist: Vol. 70 : No. 3 , Article 3. Available at: https://scholarsarchive.byu.edu/wnan/vol70/iss3/3 This Article is brought to you for free and open access by the Western North American Naturalist Publications at BYU ScholarsArchive. It has been accepted for inclusion in Western North American Naturalist by an authorized editor of BYU ScholarsArchive. For more information, please contact [email protected], [email protected]. Western North American Naturalist 70(3), © 2010, pp. 296–311 HIGH LEVELS OF GENE FLOW IN THE CALIFORNIA VOLE (MICROTUS CALIFORNICUS) ARE CONSISTENT ACROSS SPATIAL SCALES Rachel I. Adams1,2 and Elizabeth A. Hadly1 ABSTRACT.—Gene flow links the genetic and demographic structures of species. Despite the fact that similar genetic and demographic patterns shape both local population structure and regional phylogeography, the 2 levels of population connectivity are rarely studied simultaneously. Here, we studied gene flow in the California vole (Microtus californicus), a small-bodied rodent with limited vagility but high local abundance. Within a 4.86-km2 preserve in central California, genetic diversity in 6 microsatellites was high, and Bayesian methods indicated a single genetic cluster. -
Mammals of the California Desert
MAMMALS OF THE CALIFORNIA DESERT William F. Laudenslayer, Jr. Karen Boyer Buckingham Theodore A. Rado INTRODUCTION I ,+! The desert lands of southern California (Figure 1) support a rich variety of wildlife, of which mammals comprise an important element. Of the 19 living orders of mammals known in the world i- *- loday, nine are represented in the California desert15. Ninety-seven mammal species are known to t ':i he in this area. The southwestern United States has a larger number of mammal subspecies than my other continental area of comparable size (Hall 1981). This high degree of subspeciation, which f I;, ; leads to the development of new species, seems to be due to the great variation in topography, , , elevation, temperature, soils, and isolation caused by natural barriers. The order Rodentia may be k., 2:' , considered the most successful of the mammalian taxa in the desert; it is represented by 48 species Lc - occupying a wide variety of habitats. Bats comprise the second largest contingent of species. Of the 97 mammal species, 48 are found throughout the desert; the remaining 49 occur peripherally, with many restricted to the bordering mountain ranges or the Colorado River Valley. Four of the 97 I ?$ are non-native, having been introduced into the California desert. These are the Virginia opossum, ' >% Rocky Mountain mule deer, horse, and burro. Table 1 lists the desert mammals and their range 1 ;>?-axurrence as well as their current status of endangerment as determined by the U.S. fish and $' Wildlife Service (USWS 1989, 1990) and the California Department of Fish and Game (Calif. -
Safe Harbor Agreement
SAFE HARBOR AGREEMENT FOR THE RE-INTRODUCTION OF THE AMARGOSA VOLE (Microtus californicus scirpensis), IN SHOSHONE, CALIFORNIA Prepared by U.S. Fish and Wildlife Service, Carlsbad Fish and Wildlife Office and Susan Sorrells July 7, 2020 2 Table of Contents 1.0 INTRODUCTION ............................................................................................................ 5 Purpose .................................................................................................................................... 5 Enrolled Lands and Core Area ................................................................................................ 5 Regulatory Framework ........................................................................................................... 5 SHA Standard and Background .............................................................................................. 6 Assurances Provided ............................................................................................................... 6 Relationship to Other Agreements .......................................................................................... 6 2.0 STATUS AND BACKGROUND OF AMARGOSA VOLE .......................................... 7 2.1 Status and Distribution ................................................................................................. 7 2.2 Life History and Habitat Requirements ........................................................................ 8 2.3 Threats ....................................................................................................................... -
Retrotransposon- and Microsatellite Sequence-Associated Genomic Changes in Early Generations of a Newly Synthesized Allotetraploid Cucumis 3 Hytivus Chen & Kirkbride
Plant Mol Biol DOI 10.1007/s11103-011-9804-y Retrotransposon- and microsatellite sequence-associated genomic changes in early generations of a newly synthesized allotetraploid Cucumis 3 hytivus Chen & Kirkbride Biao Jiang • Qunfeng Lou • Zhiming Wu • Wanping Zhang • Dong Wang • Kere George Mbira • Yiqun Weng • Jinfeng Chen Received: 27 May 2011 / Accepted: 27 June 2011 Ó Springer Science+Business Media B.V. 2011 Abstract Allopolyploidization is considered an essential generations of a newly synthesized allotetraploid Cucum- evolutionary process in plants that could trigger genomic is 9 hytivus Chen & Kirkbride (2n = 4x = 38) which was shock in allopolyploid genome through activation of tran- derived from crossing between cultivated cucumber scription of retrotransposons, which may be important in C. sativus L. (2n = 2x = 14) and its wild relative C. hystrix plant evolution. Two retrotransposon-based markers, inter- Chakr. (2n = 2x = 24). Extensive genomic changes were retrotransposon amplified polymorphism and retro- observed, most of which involved the loss of parental DNA transposon-microsatellite amplified polymorphism and a fragments and gain of novel fragments in the allotetraploid. microsatellite-based marker, inter simple sequence repeat Among the 28 fragments examined, 24 were lost while four were employed to investigate genomic changes in early were novel, suggesting that DNA sequence elimination is a relatively frequent event during polyploidization in Cucumis. Interestingly, of the 24 lost fragments, 18 were of C. hystrix origin, four were C. sativus-specific, and the Electronic supplementary material The online version of this remaining two were shared by both species, implying that article (doi:10.1007/s11103-011-9804-y) contains supplementary material, which is available to authorized users. -
Ecological Niche Evolution and Its Relation To
514 G. Shenbrot Сборник трудов Зоологического музея МГУ им. М.В. Ломоносова Archives of Zoological Museum of Lomonosov Moscow State University Том / Vol. 54 Cтр. / Pр. 514–540 ECOLOGICAL NICHE EVOLUTION AND ITS RELATION TO PHYLOGENY AND GEOGRAPHY: A CASE STUDY OF ARVICOLINE VOLES (RODENTIA: ARVICOLINI) Georgy Shenbrot Mitrani Department of Desert Ecology, Jacob Blaustein Institutes for Desert Research, Ben-Gurion University of the Negev; [email protected] Relations between ecological niches, genetic distances and geographic ranges were analyzed by pair-wise comparisons of 43 species and 38 intra- specifi c phylogenetic lineages of arvicoline voles (genera Alexandromys, Chi onomys, Lasiopodomys, Microtus). The level of niche divergence was found to be positively correlated with the level of genetic divergence and negatively correlated with the level of differences in position of geographic ranges of species and intraspecifi c forms. Frequency of different types of niche evolution (divergence, convergence, equivalence) was found to depend on genetic and geographic relations of compared forms. Among the latter with allopatric distribution, divergence was less frequent and convergence more frequent between intra-specifi c genetic lineages than between either clo sely-related or distant species. Among the forms with parapatric dis- tri bution, frequency of divergence gradually increased and frequencies of both convergence and equivalence gradually decreased from intra-specifi c genetic lineages via closely related to distant species. Among species with allopatric distribution, frequencies of niche divergence, con vergence and equivalence in closely related and distant species were si milar. The results obtained allowed suggesting that the main direction of the niche evolution was their divergence that gradually increased with ti me since population split. -
Emory Health
Health care for the working poor 8 After cancer, what next? 12 Smallpox chronicles 25 PATIENT CARE, RESEARCH, AND EDUCATION FROM Spring 2010 THE WOODRUFF HEALTH SCIENCES CENTER Why do voles fall in love? And what that means for human health. 2 FEATURE LISTENING TO THE HORMONES CouplingBy Sylvia Wrobel Monogamy—vole style What does love—or at least monogamy—have to do with autism, schizophrenia, and other conditions with deficits in socialcial awarenessawareness and attachment? Larry Young (left) believes his quirky little prairie voles hold some answers. Once mating is over, fidelity does not come naturally to the vast majority of species.. Even within species whose members do engage in social bonding, like humans, some individuals are better at it than others. The popular question was, “Why do voles fall In the 1990s, Young (William P. Timmie in love?” The answer, said the scientists, was that oxytocin created lifelong attachment. Professor of Psychiatry at Emory and chief of behavioral neuroscience at Yerkes National Primate Research Center) and Tom Insel (then director of Yerkes and now director of the National Institute of Mental Health) created a scientific and media storm when they reported that the surprisingly ubiquitous and long-lasting monogamy exhibited by a species of voles is attributable to hormones. The popular ques- tion was, “Why do voles fall in love?” The answer, said the scientists, was that oxytocin—the same hormone released during labor, delivery, and breast feeding in humans and that promotes mother-infant bonding— creates the female prairie vole’s lifelong attachment to her male partner. -
Microtus Ochrogaster) from the Southern Plains of Texas and Oklahoma
OCCASIONAL PAPERS Museum of Texas Tech University Number 235 5 May 2004 HISTORICAL ZOOGEOGRAPHY AND TAXONOMIC STATUS OF THE PRAIRIE VOLE (MICROTUS OCHROGASTER) FROM THE SOUTHERN PLAINS OF TEXAS AND OKLAHOMA FREDERICK B. STANGL, JR., JIM R. GOETZE, AND KIMBERLY D. SPRADLING The prairie vole (Microtus ochrogaster) today is with distinct cranial characters andpale pelage colora considered a species ofthe Great Plains, whose range tion, they described M. o. taylori. extends from the interior grasslands ofsouthern Canada to central Oklahoma and the northernTexas Panhandle, Choate and Williams (1978) perfonned a mor and is generally bordered by the Rocky Mountains to phometric analysis ofthe prairie vole, which included the west and the eastern deciduous woodlands (Bee et material reported onby Hibbard and Rinker (1943) as al. 1981; Hall 1981; Hoffmann andKoeppl 1985; Caire M. o. taylori. Each of their external body measure et al. 1990; Stalling 1990). Duringthe late Pleistocene, ments and four of the seven cranial characters (skull the species occurred throughout much ofTexas, leav length, zygomatic breadth, mastoidal breadth, and least ing fossil evidence as far south as the Edwards Pla interorbital breadth) exhibited significant geographic teau and parts ofthe GulfCoast (Dalquest and Schultz variation. While no geographic patterns were evident 1992; Graham 1987). The species retreated north to suggest subspecific levels of differentiation, popu ward with the advent ofincreasingly arid climate dur lations from the Dakotas to Kansas demonstrated a ing the Holocene. At least one isolated population, M. slight north-to-south elinal increase in size of cranial o. ludovicianus, was stranded during this time, and is characters. -
Water Vole (Arvicola Amphibius) Abundance in Grassland Habitats of Glasgow
The Glasgow Naturalist (online 2018) Volume 27, Part 1 Water vole (Arvicola amphibius) abundance in grassland habitats of Glasgow R.A. Stewart1, C. Jarrett1, C. Scott2, S.A. White1 & D.J. McCafferty3 1 Institute of Biodiversity, Animal Health and Comparative Medicine, College of Medical, Veterinary and Life Sciences, University of Glasgow, G12 8QQ, Scotland, UK 2 Land and Environmental Services, Glasgow City Council, 231 George Street, Glasgow, G1 1RX, Scotland, UK 3 Scottish Centre for Ecology and the Natural Environment, Institute of Biodiversity, Animal Health and Comparative Medicine, College of Medical, Veterinary and Life Sciences, Rowardennan, Glasgow, G63 0AW, Scotland, UK 1 E-mail: [email protected] ABSTRACT breeding season, demarcating the area with piles of Water vole (Arvicola amphibius) populations have droppings (latrines) and actively excluding other undergone a serious decline throughout the UK, and yet females, in contrast to the larger home range of the a stronghold of these small mammals is found in the males (Strachan & Moorhouse, 2006). The length of greater Easterhouse area of Glasgow. The water voles in habitat occupied is dependent on population density this location are mostly fossorial, living a largely with mean territory size measuring 30-150 m for subterranean existence in grasslands, rather than the females and 60-300 m for male home ranges at high and more typical semi-aquatic lifestyle in riparian habitats. low densities, respectively (Strachan & Moorhouse, In this study, we carried out capture-mark-recapture 2006). The mating season is triggered by increasing day surveys on water voles at two sites: Cranhill Park and length in early spring and extends from March through Tillycairn Drive. -
Guidelines for Wildlife and Traffic in the Carpathians
Wildlife and Traffic in the Carpathians Guidelines how to minimize the impact of transport infrastructure development on nature in the Carpathian countries Wildlife and Traffic in the Carpathians Guidelines how to minimize the impact of transport infrastructure development on nature in the Carpathian countries Part of Output 3.2 Planning Toolkit TRANSGREEN Project “Integrated Transport and Green Infrastructure Planning in the Danube-Carpathian Region for the Benefit of People and Nature” Danube Transnational Programme, DTP1-187-3.1 April 2019 Project co-funded by the European Regional Development Fund (ERDF) www.interreg-danube.eu/transgreen Authors Václav Hlaváč (Nature Conservation Agency of the Czech Republic, Member of the Carpathian Convention Work- ing Group for Sustainable Transport, co-author of “COST 341 Habitat Fragmentation due to Trans- portation Infrastructure, Wildlife and Traffic, A European Handbook for Identifying Conflicts and Designing Solutions” and “On the permeability of roads for wildlife: a handbook, 2002”) Petr Anděl (Consultant, EVERNIA s.r.o. Liberec, Czech Republic, co-author of “On the permeability of roads for wildlife: a handbook, 2002”) Jitka Matoušová (Nature Conservation Agency of the Czech Republic) Ivo Dostál (Transport Research Centre, Czech Republic) Martin Strnad (Nature Conservation Agency of the Czech Republic, specialist in ecological connectivity) Contributors Andriy-Taras Bashta (Biologist, Institute of Ecology of the Carpathians, National Academy of Science in Ukraine) Katarína Gáliková (National -
Evaluation of the Effects of Sequence Length and Microsatellite Instability
Int. J. Biol. Sci. 2019, Vol. 15 2641 Ivyspring International Publisher International Journal of Biological Sciences 2019; 15(12): 2641-2653. doi: 10.7150/ijbs.37152 Research Paper Evaluation of the effects of sequence length and microsatellite instability on single-guide RNA activity and specificity Changzhi Zhao1*, Yunlong Wang2*, Xiongwei Nie1, Xiaosong Han1, Hailong Liu1, Guanglei Li1, Gaojuan Yang1, Jinxue Ruan1, Yunlong Ma1, Xinyun Li1, 3, Huijun Cheng1, Shuhong Zhao1, 3, Yaping Fang2, Shengsong Xie1, 3 1. Key Laboratory of Agricultural Animal Genetics, Breeding and Reproduction of Ministry of Education & Key Lab of Swine Genetics and Breeding of Ministry of Agriculture and Rural Affairs, Huazhong Agricultural University, Wuhan 430070, P. R. China; 2. Agricultural Bioinformatics Key Laboratory of Hubei Province, Hubei Engineering Technology Research Center of Agricultural Big Data, College of Informatics, Huazhong Agricultural University, Wuhan 430070, P. R. China; 3. The Cooperative Innovation Center for Sustainable Pig Production, Huazhong Agricultural University, Wuhan 430070, P. R. China. *The authors wish it to be known that, in their opinion, the first two authors should be regarded as joint First Authors. Corresponding authors: Shengsong Xie, Tel: 086-027-87387480; Fax: 086-027-87280408; Email: [email protected]; Yaping Fang, Tel: 86-28-87285078; Fax: 86-28-87284285; Email: [email protected]. © The author(s). This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/). See http://ivyspring.com/terms for full terms and conditions. Received: 2019.07.21; Accepted: 2019.09.02; Published: 2019.10.03 Abstract Clustered regularly interspaced short palindromic repeats (CRISPR)/Cas9 technology is effective for genome editing and now widely used in life science research. -
Southern Bog Lemming, Synaptomys Cooperi,Andthe Mammals: Their Natural History, Classification, and Meadow Vole, Microtus Pennsylvanicus,Invirginia
Synaptomys cooperi (Baird, 1858) SBLE W. Mark Ford and Joshua Laerm CONTENT AND TAXONOMIC COMMENTS There are eight subspecies of the southern bog lem- ming (Synaptomys cooperi) recognized, four of which occur in the South: S. c. gossii, S. c. helaletes, S. c. kentucki, and S. c. stonei (Wetzel 1955, Barbour 1956, Hall 1981, Linzey 1983, Long 1987). However, Whitaker and Hamilton (1998) indicate that S. c. gossii, S. c. kentucki, and S. c. stonei could be referable to S. c. cooperi.The literature was reviewed by Linzey (1983). DISTINGUISHING CHARACTERISTICS The southern bog lemming is a robust, short-tailed vole with a broad head, small ears, and small eyes. Its measurements are: total length, 119–154 mm; tail, 13–25 mm; hind foot, 16–24 mm; ear, 8–14 mm; weight, 20–50 g. The dental formula for this species is: I 1/1, C 0/0, P 0/0, M 3/3 = 16 (Figure 1). The pel- age is bright chestnut to dark grizzled brown dor- sally, grading into silver grayish white ventrally, with gray to brown feet and tail. The southern bog lemming readily is distinguished from other voles by its short tail (usually less than hind foot length), pres- ence of a shallow longitudinal groove along upper incisors, and deep reentrant angles on molars. See keys for details. CONSERVATION STATUS The southern bog lemming has a global rank of Secure (NatureServe 2007). It is listed as Secure in Virginia and Apparently Secure in Kentucky and Tennessee. It is listed as Vulnerable in North Carolina, Imperiled in Arkansas, and Critically Imperiled in Georgia. -
TVERC.18.371 TVERC Office Biodiversity Report
Thames Valley Environmental Records Centre Sharing environmental information in Berkshire and Oxfordshire BIODIVERSITY REPORT Site: TVERC Office TVERC Ref: TVERC/18/371 Prepared for: TVERC On: 05/09/2018 By: Thames Valley Environmental Records Centre 01865 815 451 [email protected] www.tverc.org This report should not to be passed on to third parties or published without prior permission of TVERC. Please be aware that printing maps from this report requires an appropriate OS licence. TVERC is hosted by Oxfordshire County Council TABLE OF CONTENTS The following are included in this report: GENERAL INFORMATION: Terms & Conditions Species data statements PROTECTED & NOTABLE SPECIES INFORMATION: Summary table of legally protected and notable species records within 1km search area Summary table of Invasive species records within 1km search area Species status key Data origin key DESIGNATED WILDLIFE SITE INFORMATION: A map of designated wildlife sites within 1km search area Descriptions/citations for designated wildlife sites Designated wildlife sites guidance HABITAT INFORMATION: A map of section 41 habitats of principal importance within 1km search area A list of habitats and total area within the search area Habitat metadata TVERC is hosted by Oxfordshire County Council TERMS AND CONDITIONS The copyright for this document and the information provided is retained by Thames Valley Environmental Records Centre. The copyright for some of the species data will be held by a recording group or individual recorder. Where this is the case, and the group or individual providing the data in known, the data origin will be given in the species table. TVERC must be acknowledged if any part of this report or data derived from it is used in a report.