FAUSTINO JOVITA MALAGUTI Sugar, Substitution Theory, and Amides
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Proceedings of the Indiana Academy of Science
The Nitrogen Dioxide Oxidation of Starch* J. W. Mench, with Ed F. Degering, Purdue University Although the literature contains over two hundred references to the oxidation of starch, little is known concerning the structures of the products because various oxidants may simultaneously attack one or more of the hydroxl groups to produce a complicated structure containing car- boxyl, aldehyde, and ketone groupings. An exception appears to result when periodic acid is used, since this oxidant seemingly exhibits a specificity towards parts of the carbohydrate molecule containing adja- 1 2 cent, secondary hydroxyl groupings. - The observations of Unruh, Yec- kel, and Kenyon,M that cellulose can be oxidized with nitrogen dioxide to a polyanhydroglucuronic acid, indicate that this reagent preferentially attacks the primary hydroxyl groups in certain glycosides. We have attempted to apply to starch both the static and cyclic method of oxidation reported by these men, in an effort to produce the alpha-linked polyanhydroglucuronic acids. However, the tendency of the powdered carbohydrate to pack made these procedures unsatisfactory, since the reactions were difficult to control and at least partial hydrolysis of the starch frequently occurred. We have found, however, that under suitable conditions, starch may be oxidized by nitrogen dioxide to produce a new type of oxidized starch containing, predominately, uronic acid residues. This point was con- firmed, qualitatively, by a positive beta-naphthol test,5 which indicated the presence of glucuronic acid, although attempts to hydrolyze the prod- ucts to glucuronic acid, and to prepare the cinchonine salt or oxime of this compound were without success. The procedure and diluent utilized in this work was suggested by the work of Maurer and Drefahl,6 who oxidized galactose, methyl gluco- side, and methyl galactoside with nitrogen dioxide in carbon tetrachloride or chloroform—obtaining mucic acid and the corresponding substituted uronic acids, respectively. -
Elimination of Galactaric Acid Catabolism by Using RNA Sequencing and CRISPR/Cas9 Joosu Kuivanen*†, Y.‑M
Kuivanen et al. Microb Cell Fact (2016) 15:210 DOI 10.1186/s12934-016-0613-5 Microbial Cell Factories RESEARCH Open Access Engineering Aspergillus niger for galactaric acid production: elimination of galactaric acid catabolism by using RNA sequencing and CRISPR/Cas9 Joosu Kuivanen*†, Y.‑M. Jasmin Wang† and Peter Richard Abstract Background: meso-Galactaric acid is a dicarboxylic acid that can be produced by the oxidation of D-galacturonic acid, the main constituent of pectin. Mould strains can be engineered to perform this oxidation by expressing the bacterial enzyme uronate dehydrogenase. In addition, the endogenous pathway for D-galacturonic acid catabolism has to be inactivated. The filamentous fungus Aspergillus niger would be a suitable strain for galactaric acid produc‑ tion since it is efficient in pectin hydrolysis, however, it is catabolizing the resulting galactaric acid via an unknown catabolic pathway. Results: In this study, a transcriptomics approach was used to identify genes involved in galactaric acid catabolism. Several genes were deleted using CRISPR/Cas9 together with in vitro synthesized sgRNA. As a result, galactaric acid catabolism was disrupted. An engineered A. niger strain combining the disrupted galactaric and D-galacturonic acid catabolism with an expression of a heterologous uronate dehydrogenase produced galactaric acid from D-galactu‑ ronic acid. The resulting strain was also converting pectin-rich biomass to galactaric acid in a consolidated bioprocess. Conclusions: In the present study, we demonstrated the use of CRISPR/Cas9 mediated gene deletion technology in A. niger in an metabolic engineering application. As a result, a strain for the efficient production of galactaric acid from D-galacturonic acid was generated. -
Trichoderma Reesei Toni Paasikallio, Anne Huuskonen and Marilyn G
Paasikallio et al. Microb Cell Fact (2017) 16:119 DOI 10.1186/s12934-017-0736-3 Microbial Cell Factories RESEARCH Open Access Scaling up and scaling down the production of galactaric acid from pectin using Trichoderma reesei Toni Paasikallio, Anne Huuskonen and Marilyn G. Wiebe* Abstract Background: Bioconversion of D-galacturonic acid to galactaric (mucic) acid has previously been carried out in small scale (50–1000 mL) cultures, which produce tens of grams of galactaric acid. To obtain larger amounts of biologically produced galactaric acid, the process needed to be scaled up using a readily available technical substrate. Food grade pectin was selected as a readily available source of D-galacturonic acid for conversion to galactaric acid. Results: We demonstrated that the process using Trichoderma reesei QM6a Δgar1 udh can be scaled up from 1 L to 1 10 and 250 L, replacing pure D-galacturonic acid with commercially available pectin. T. reesei produced 18 g L− galac- 1 1 taric acid from food-grade pectin (yield 1.00 g [g D-galacturonate consumed]− ) when grown at 1 L scale, 21 g L− 1 1 galactaric acid (yield 1.11 g [g D-galacturonate consumed]− ) when grown at 10 L scale and 14 g L− galactaric acid 1 (yield 0.77 g [g D-galacturonate consumed]− ) when grown at 250 L scale. Initial production rates were similar to those observed in 500 mL cultures with pure D-galacturonate as substrate. Approximately 2.8 kg galactaric acid was precipitated from the 250 L culture, representing a recovery of 77% of the galactaric acid in the supernatant. -
Sigma Sugars and Carbohydrates
Sigma Sugars and Carbohydrates Library Listing – 614 spectra This library represents a material-specific subset of the larger Sigma Biochemical Condensed Phase Library relating to sugars and carbohydrates found in the Sigma Biochemicals and Reagents catalog. Spectra acquired by Sigma-Aldrich Co. which were examined and processed at Thermo Fisher Scientific. The spectra include compound name, molecular formula, CAS (Chemical Abstract Service) registry number, and Sigma catalog number. Sigma Sugars and Carbohydrates Index Compound Name Index Compound Name 255 (+/-)-Epi-inosose-2 475 2,3,4,6-Tetra-O-methyl-D-glucopyranose 468 1,2,3,4-Tetra-O-acetyl-6- 487 2,3,5-Tri-O-benzoyl-1-O-p-nitrobenzoyl diphenylphosphoryl-b-D-manopyranose D-ribofuranoside 471 1,2,3,4-Tetra-O-acetyl-b-D- 490 2,3,5-Tri-O-benzyl-1-O-p-nitrobenzoyl- glucopyranose D-arabinofuranoside 472 1,2,3,5-Tetra-O-acetyl-b-D-ribofuranose 488 2,3,5-Tri-O-benzyl-b-D-arabinofuranose 473 1,2,3,5-Tetra-O-benzoyl-a-D- 489 2,3,5-Tri-O-benzyl-b-L-arabinofuranose xylofuranose 107 2,3-Dehydro-2-deoxy-N- 258 1,2-O-Isopropylidene-3-O-benzyl-rac- acetylneuraminic acid glycerol 142 2,3-Diphospho-D-glyceric acid, 261 1,2-O-Isopropylidene-5-O-p-tosyl-a-D- penta(CHA) salt xylofuranose 143 2,3-Diphospho-D-glyceric acid, 259 1,2-O-Isopropylidene-D-glucofuranose pentasodium salt 262 1,2-O-Isopropylidene-D-xylofuranose 144 2,3-Diphospho-D-glyceric acid, tris salt 135 1,2:3,4-Di-O-isopropylidene-D- 260 2,3-O-Isopropylidene-b-D- galactopyranose ribofuranosylamine, tosylate salt 141 1,2:3,5-Di-O-isopropylidene-D- -
OXAMYL (126) First Draft Prepared by Ursula Banasiak, Federal Biological Research Centre for Agriculture and Forestry (BBA), Kleinmachnow, Germany
1007 OXAMYL (126) First draft prepared by Ursula Banasiak, Federal Biological Research Centre for Agriculture and Forestry (BBA), Kleinmachnow, Germany EXPLANATION Oxamyl was listed by the 1997 CCPR (29th Session, ALINORM 97/24A) for periodic re-evaluation for residues by the 2002 JMPR. IDENTITY ISO common name: oxamyl Chemical name IUPAC: N,N-dimethyl-2-methylcarbamoyloxyimino-2-(methylthio)acetamide CAS: methyl 2-(dimethylamino)-N-[[(methylamino)carbonyl]oxy]-2-oxoethanimidothioate CAS Registry No: 23135-22-0 CIPAC No: 342 Synonyms: DPX-D1410, oxamil Structural formula: CH3 S H 3 C N O N O H 3 C O NH H 3 C Molecular formula: C7H13N3O3S Molecular weight: 219.3 Physical and chemical properties Pure active ingredient Appearance: White crystalline solid (Tuffy, 2000a) Vapour pressure (at 25°C): 5.12 x 10-5 Pa (Barefoot, 1989a) Henry’s law constant (at 25°C): 3.96 x 10-8 Pa m3 x mol-1 (Barefoot, 1989b) Melting point: 99.8°C (Silveira, 1988) Octanol/water partition coefficient (at 25°C): 0.36 (Melander, 1988) Solubility in water (at 25°C): 28.2 g/100 g (Hoffmann, 1988) Solubility in organic solvents (at 20°C): acetone: >250 g/kg dichloromethane: >250 g/kg methanol: >250 g/kg n-heptane: 10.5 mg/l ethyl acetate: 4.13 x 104 mg/l 1008 oxamyl o-xylene: 3.14 x 103 mg/l (Hansen, 2000) Relative density: 1.313 g/cm3 (1313 kg/m3) (Tuffy, 2000b) Hydrolysis (half-life at 25°C): pH 5: <31 days, pH 7: 7.9 days, pH 9: 0.12 days (McNally and Wheeler, 1988a) Photolysis (half-life at 25°C): 7 days (McNally and Wheeler, 1988b) Technical material Appearance: no information. -
Dithiooxamide As an Analytical Reagent
DITHIOOXAMIDB AS AH ANALYTICAL HKAGJSHT by OHLANi) WILLIAM KOLLING B* A«, Prlends University, 1948 M. A,, Washington University, 1950 A TBSBIE submitted in partial fulfillment of the requirements for the degree MASTEfi Oy eCISNCB Department of Chemistry KANSAS STATE COLLEGS OP AGHICULTUi'ia AND APPLIED iiCUBOB 1958 L9 2 bQ>S ii acu^eA^f S SAILS OF CONTMTS INTHODUCTION 1 AHALITIOAL APPLICATIOITS OF RDBIAHIC ACID 4 fiUBBAHIC ACID AS AH ACID IN A^UBOUS AND NOHAQUBOUS MEDIA. 7 Method of Back and fJteenberg 7 Bvalurition of K„, K ^, and Molar Solubility by the Method of Back and Steenberg 9 Direct Determination of Molar Solubility as a Function of Ionic Strength 10 Squilibria In Dimethylformamide and Methanol 12 Experimental Details. ••••••••.. 16 Results and Discussion • 17 Determination of the libctinction Coefficients for Band Peaks •....••.•.•• 30 RBAOTION OF DITHIOOXAMIDB ACID WITH METALLIC IONS 39 Copper Rubeanate •••• ••••••••••• 39 qualitative Solubility in Various Organic Solvents. 39 Evaluation of the Molar Solubility of Copper ttubeanate in Aqueous Solution.. 4-2 Cobalt and Nickel Rubeanates 43 Solubility in Organic Solvents . 48 v^uantitotive Determination of the Solubility of Cobalt and Nickel Rubeanates •.•••••.•• 50 Structures for the Rubeanates •• 52 SUMMARY 57 ACKHOWLBDGMiafT 60 BIBLIOGRAPHY 61 .jd • » imROJliOTlOM Slthiooxamide, which is coniuonly called rubeanic acid, ie a weakly acidic compound, capable of chelate formation with a nuiaber of aetallic ions* Presiisiablj, the acidic character of rubeanic acid is attributable to the tautosierissi existing be- tween the diamido (base)| aoidoiaido (se£ii-acid), and dliaido (acid) forms (12) S - C-HHo W>-Q » RH HS-C » M 1 2 -V 1 -> , S-C-NHp^ S.C--NH2 ilS-C - HH H ^ + - » HH S-G ml" rs-C 7h^ S-C— HH^ ^ HS-C « NH n ^_ » Nil S-C +H^ S-C « NH It follows from these equilibria that to increase the con- centration of the rubeanate ion, removal of hydrogen ion is re- quired, and that as an analytical reagent rubeanic acid is most sensitive in basic solutions. -
Experiment 20 Identification of Some Carbohydrates
Experiment 20 Identification of Some Carbohydrates Carbohydrates are the direct product of the photosynthetic combination of carbon dioxide and water. By weight, they are the most common organic compounds on earth. Since most have the empirical formula CnH2nOn = Cn(H2O)n it was initially believed that they were hydrates of carbon. Hence the name. In actuality they are polyhydroxylaldehydes and ketones and exist as cyclic hemi- and full acetals. The cyclic forms may be five-membered rings (furanose) or six-membered rings (pyranose). They are classified as mono-, di-, and polysaccharides. The term sugar applies to mono-, di-, and oligosaccharides, which are all soluble in water and thereby distinguished from polysaccharides, which are not soluble in water. The most commonly encountered carbohydrates are starch, glycogen, inulin, cellulose, sucrose, fructose, arabinose, mannose, glucose, maltose, galactose, and lactose. The method of analysis used in this experiment is one of elimination. The assumption is made that the compound is a single carbohydrate and tests are applied sequentially until a positive result is obtained. The carbohydrate giving the positive test is thus identified. The sugars that we will identify are shown below. Figure 20.1 Monosaccharides Aldohexoses O H C O H CH OH 2 O H C OH C HO OH HO C H HO HO C H OH H C OH HOCH OH HO C H 2 O H C OH D-glucose H C OH HO OH HO H C OH CH2OH D-mannose CH2OH O H C OH H C OH CH2OH CH2OH ketohexose O O C OH HO C H HO HOCH2 O OH HO C H HO C H HO D-galactose H C OH HO H C OH CH2OH CH OH -
Detection of Atmospheric Gaseous Amines and Amides by a High Resolu
RE: A point-to-point response to Reviewer #1’s comments “Detection of atmospheric gaseous amines and amides by a high resolution time-of-flight chemical ionization mass spectrometer with protonated ethanol reagent ions” (acp-2016-484) by Lei Yao, Ming-Yi Wang, Xin-Ke Wang, Yi-Jun Liu, Hang-Fei Chen, Jun Zheng, Wei Nie, Ai-Jun Ding, Fu-Hai Geng, Dong-Fang Wang, Jian-Min Chen, Douglas R. Worsnop, and Lin Wang We are grateful to the helpful comments from this anonymous referee, and have carefully revised our manuscript accordingly. A point-to-point response to Reviewer #1’s comments, which are repeated in italic, is given below. Reviewer #1’s comments: The authors make simultaneous measurements of amines and amides using a recently developed online instrument, the HR-ToF-CIMS. They use ethanol as the reagent ion to optimize the detection of nitrogen-containing molecules. The instrument characteristics within the laboratory context are thorough and well presented, and include calibrations, relative humidity dependence measurements and organic effect on the measured concentrations. The calibrated HR-ToF-CIMS was then employed to make ambient air measurements of a wide range of amines and amides at an urban site in Shanghai. The ambient measurements answer some questions about sources, sinks and transport of amines and amides and has the potential to be a useful reference for future work on the fate of organic nitrogen compounds in the atmosphere. In particular, the manuscript is well presented with clear experimental detail. However, the referencing is generally incomplete and careful attention should be taken to research the literature accurately. -
Food Waste Conversion to Galactaric Acid
Food waste conversion to Galactaric acid KT Consortium Maria do Carmo Cabral Sacadura, John Woodley, Rafiqul Gani Annual Meeting KT Consortium, Department of Chemical and Biochemical Engineering, Technical University of Denmark June 2017 Introduction Galactaric acid (GA), also known as mucic acid, is a symmetrical six carbon diacid. GA is used as a chelator and in skin care products and has the potential application in polymer synthesis as a platform chemical. Its market is limited to the pharmaceutical and cosmetic industry. Currently, GA is commercially produced by oxidation of galactose with nitric acid or from D-galacturonic acid (D-galUA) by electrolytic oxidation. An alternative source of D-galUA is pectin, an abundant component in non- woody plant biomass such as in fruit peels. Citrus Processing Waste (CPW) is mainly generated from the industry of juice production which generates 10 million tonnes of wet CPW. Thus, it represents an available and inexpensive source for production of GA. The present project suggests an alternative route for production of GA through extraction of pectin from dry citrus peel, and its hydrolysis releasing D-galUA which is later oxidized to GA. An innovative, sustainable and environment-friendly solution is sought and analyzed through an economical and environmental assessment based on calculations done with simple derived models. The aim is to produce 2000 tonnes per year of GA. Figure 1. Chemical structure of Galactaric acid. For the extraction of pectin from dry citrus peel (TK1), citric acid and water are used as solvents (TK2) and the operation runs for 60 min at the solution’s boiling point (around 100 Process flowsheet ºC) and pH 2.3. -
Oxamide (U.S.) (800)-424-9300 DATA Sheet (International) (703)-527-3887
Hummel Croton Inc. 10 Harmich Road South Plainfield, NJ 07080 MSDS Tel:908-754-1800 / Fax 908-754-1815 In case of Emergengy Call Chemtrec ® Printable Version Oxamide (U.S.) (800)-424-9300 DATA Sheet (International) (703)-527-3887 Section I. Chemical Product and Company Identification Supplier: Hummel Croton Inc. 10 Harmich Road HMIS Rating South Plainfield, NJ 07080 (908)-754-1800 Health 1 Flammability 0 Chemical Name: Oxamide Reactivity 0 Synonym: Oxalic Acid Amide, Ethane Diamide CAS Number: 471-46-5 Personal Protection E Chemical Formula: NH2COCONH2 Section II. Composition and Information on Ingredients Material CAS# % OSHA ACGIH Oxamide 471-46-5 100% Not Established Not Established Since no Exposure limits have been established for Oxamide by OSHA & ACGIH, we recommend that our product should be treated as a nuisance dust 15 mg/m³. Section III Hazards Identification: Accute Health Effects: Irritating to the skin and eyes on contact. Inhalation will cause irritation to the lungs and mucus membrane. Irritation to the eyes will cause watering and redness. Reddening, scaling, and itching are characteristics of skin inflammation. Follow safe industrial hygiene practices and always wear protective equipment when handling this compound. Chronic Health Effects: This product has no known chronic effects. Repeated or prolong exposure to this compound is not known to aggravate medical conditions. Accute Health Effects: This product is not listed by NTP, IARC or regulated as a Carcinogen by OSHA. Section IV. First Aid Measures First Aid For Eye: In case of contact, immediately flush eyes with plenty of water for at least 15 minutes. Call a physician. -
UNITED STATES PATENT OFFICE 2,675,378 CYCLIC PROCESS for PREPARING OAZOALKANES Frank S
Patented Apr. 13, 1954 2,675,378 UNITED STATES PATENT OFFICE 2,675,378 CYCLIC PROCESS FOR PREPARING OAZOALKANES Frank S. Fawcett, Wilmington, Dei, assignor to E.I. du Pont de Nemours and Company, Wil mington, Del, a corporation of Delaware No Drawing. Application July 22, 1952, Serial No. 300,333 2 Claims. (CI. 260-239) 1. 2 This invention relates to the preparation of In practice, an N,N'-dialkyloxamide in Solution aliphatic diazo compounds and more particularly or as a slurry in a suitable solvent is nitroSated to a cyclic process for obtaining such products. by treating it with oxides of nitrogen, convenient The aliphatic diazo compounds are an excep ly generated by reacting 56% nitric acid with tional class of chemical intermediate character 5 arsenious oxide, or by other suitable means for ized by versatility in their reactions. Thus, diazo generating nitrogen oxides known to the art. methane is particularly useful in organic Syn The resulting N,N'-dialkyl-N,N'-dinitrosooX theses, for example, in the methylation of acidic amide is then treated with an alkylnonoamine, organic compounds, the lengthening of carbon preferably one whose alkyl group is the same as chains of carboxylic acids by the well-known 10 that attached to the nitrogen of the OXamide. Arndt-Eistert synthesis (“Organic Reactions,' The aliphatic diazo compound, if it boils lower vol. I, p. 38, John Wiley & Sons, Inc. (1942)), and than the solvent, continuously distills as it forms, in a variety of useful reactions with carbonyl and is collected in Suitably refrigerated traps. If compouilds and unsaturated Organic derivatives. -
Continuous Production of Oxamide by the Catalytic Oxidation of HCN
Europaisches Patentamt European Patent Office © Publication number: 0 571 041 A1 Office europeen des brevets EUROPEAN PATENT APPLICATION © Application number: 93201408.7408.7 © int. Ci.5; C07C 231/00, C07C 233/56 @ Date of filing: 18.05.93 ® Priority: 22.05.92 IT MI921248 © Applicant: Enichem Anic S.r.l. Via Ruggero Settimo 55 @ Date of publication of application: 1-90139 Palermo(IT) 24.11.93 Bulletin 93/47 @ Inventor: Messina, Giuseppe © Designated Contracting States: Via Perpignan 27, AT BE CH DE DK ES FR GB GR IE IT LI LU MC 1-07041, Alghero (Sassari)(IT) NL PT SE Inventor: Sechi, Giovanni Matteo Via Alessandro Volta 4 1-07014, Ozieri (Sassari)(IT) Inventor: De Micheli, Silvio Via Roma 112 I-20024, Garbagnate Milanese (Milan)(IT) © Representative: Roggero, Sergio Ing. Barzano & Zanardo Milano S.p.A. Via Borgonuovo 10 1-20121 Milano (IT) © Continuous production of oxamide by the catalytic oxidation of HCN. © A continuous process for the production of ox- ng.3 amide is based on the catalytic oxidation of hy- drogen cyanide with oxygen or air in a strong excess in a solution of copper nitrate in water-acetic acid. The process is carried out in a vertical tubular SR reactor, with continuous recycling of part of the V suspension of oxamides from the bottom to the top of the reactor. L5 < "•3 I- 6 5 Rank Xerox (UK) Business Services (3. 10/3.6/3.3. 1) 1 EP 0 571 041 A1 2 The present invention relates to a procedure 2 HCN + 1/2 02 -> (CN)2 + H20 for the preparation in continuous of oxamide.