Specialized Specialists and the Narrow Niche Fallacy: a Tale of Scale
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Novel Trophic Niches Drive Variable Progress Towards Ecological Speciation Within an Adaptive Radiation of Pupfishes
Molecular Ecology (2014) 23, 1846–1862 doi: 10.1111/mec.12658 Novel trophic niches drive variable progress towards ecological speciation within an adaptive radiation of pupfishes CHRISTOPHER H. MARTIN*† and LAURA C. FEINSTEIN†‡ *Department of Environmental Science, Policy, and Management, University of California, Berkeley, CA 94720, USA, †Department of Evolution & Ecology, University of California, Davis, CA 94616, USA, ‡California Council on Science and Technology, 1130 K Street, Sacramento, CA 95814, USA Abstract Adaptive radiation is recognized by a rapid burst of phenotypic, ecological and species diversification. However, it is unknown whether different species within an adaptive radiation evolve reproductive isolation at different rates. We compared patterns of genetic differentiation between nascent species within an adaptive radiation of Cyprin- odon pupfishes using genotyping by sequencing. Similar to classic adaptive radiations, this clade exhibits rapid morphological diversification rates and two species are novel trophic specialists, a scale-eater and hard-shelled prey specialist (durophage), yet the radiation is <10 000 years old. Both specialists and an abundant generalist species all coexist in the benthic zone of lakes on San Salvador Island, Bahamas. Based on 13 912 single-nucleotide polymorphisms (SNPs), we found consistent differences in genetic differentiation between each specialist species and the generalist across seven lakes. The scale-eater showed the greatest genetic differentiation and clustered by species across lakes, whereas durophage populations often clustered with sympatric generalist populations, consistent with parallel speciation across lakes. However, we found strong evidence of admixture between durophage populations in different lakes, sup- porting a single origin of this species and genome-wide introgression with sympatric generalist populations. -
Los Peces Caribes De Venezuela.Pdf
Bol. Acad. C. Fís., Mat. y Nat. Vol. LXII No. 1 Marzo, 2002: 35-88. Antonio Machado-Allison: Los Peces Caribes de Venezuela LOS PECES CARIBES DE VENEZUELA: UNA APROXIMACIÓN A SU ESTUDIO TAXONÓMICO Antonio Machado Allison* El Trabajo presenta una sinopsis detallada de las diez y seis especies de caribes (pirañas) de Venezuela, incluidas en los géneros: Pygopristis (1 especie), Pristobrycon (4 especies), Pygocentrus (1 especie) y Serrasalmus (10 especies). Se discuten los aspectos histórico-taxonómico de cada especie, desde las Crónicas de Indias, los primeros naturalistas, hasta las contribuciones científicas más recientes. Se discute la validez de los nombres utilizados tradicionalmente y sus sinonimias. Se sugieren aspectos evolutivos y de relaciones filogenéticas intra y entre los diferentes géneros. Se ilustra cada especie con dibujos y fotografías y se incorporan claves para la identificación de los géneros y las especies. This paper present a detailed sinopsis of the piranha sixteen species of Venezuela, included in the genera: Pygopristis (1 species), Pristobrycon (4 species), Pygocentrus (1 species) y Serrasalmus (10 species). Discussions on historical-taxonomic aspects of each species are included from the Indian Crónicas de Indias, the first naturalists, to recent scientific contributions. Names traditionally used and sinonomies of each species are discussed. Suggestions on hypothesis of relationships and evolution inside groups and among genera are given. Each species is illustrated with drawings and photographs. Keys for the identification of species are included. Palabras Clave: Peces, Caribes, Venezuela, Clasificación Keywords: Fish, Piranha, Venezuela, Clasification I. INTRODUCCION mundial, gracias a la proliferación de historias, leyendas y fantasías muchas veces sin sentido. -
The Etyfish Project © Christopher Scharpf and Kenneth J
CYPRINODONTIFORMES (part 3) · 1 The ETYFish Project © Christopher Scharpf and Kenneth J. Lazara COMMENTS: v. 3.0 - 13 Nov. 2020 Order CYPRINODONTIFORMES (part 3 of 4) Suborder CYPRINODONTOIDEI Family PANTANODONTIDAE Spine Killifishes Pantanodon Myers 1955 pan(tos), all; ano-, without; odon, tooth, referring to lack of teeth in P. podoxys (=stuhlmanni) Pantanodon madagascariensis (Arnoult 1963) -ensis, suffix denoting place: Madagascar, where it is endemic [extinct due to habitat loss] Pantanodon stuhlmanni (Ahl 1924) in honor of Franz Ludwig Stuhlmann (1863-1928), German Colonial Service, who, with Emin Pascha, led the German East Africa Expedition (1889-1892), during which type was collected Family CYPRINODONTIDAE Pupfishes 10 genera · 112 species/subspecies Subfamily Cubanichthyinae Island Pupfishes Cubanichthys Hubbs 1926 Cuba, where genus was thought to be endemic until generic placement of C. pengelleyi; ichthys, fish Cubanichthys cubensis (Eigenmann 1903) -ensis, suffix denoting place: Cuba, where it is endemic (including mainland and Isla de la Juventud, or Isle of Pines) Cubanichthys pengelleyi (Fowler 1939) in honor of Jamaican physician and medical officer Charles Edward Pengelley (1888-1966), who “obtained” type specimens and “sent interesting details of his experience with them as aquarium fishes” Yssolebias Huber 2012 yssos, javelin, referring to elongate and narrow dorsal and anal fins with sharp borders; lebias, Greek name for a kind of small fish, first applied to killifishes (“Les Lebias”) by Cuvier (1816) and now a -
Building Trophic Specializations That Result in Substantial Niche
Journal of Anatomy J. Anat. (2017) doi: 10.1111/joa.12742 Building trophic specializations that result in substantial niche partitioning within a young adaptive radiation Luz Patricia Hernandez,1 Dominique Adriaens,2 Christopher H. Martin,3 Peter C. Wainwright,4 Bert Masschaele5 and Manuel Dierick5 1Department of Biological Sciences, The George Washington University, Washington, DC, USA 2Evolutionary Morphology of Vertebrates, Ghent University, Ghent, Belgium 3Department of Biology, University of North Carolina, Chapel Hill, Chapel Hill, NC, USA 4Department of Evolution & Ecology, University of California, Davis, Davis, CA, USA 5Department of Subatomic and Radiation Physics, Ghent University, Ghent, Belgium Abstract Dietary partitioning often accompanies the increased morphological diversity seen during adaptive radiations within aquatic systems. While such niche partitioning would be expected in older radiations, it is unclear how significant morphological divergence occurs within a shorter time period. Here we show how differential growth in key elements of the feeding mechanism can bring about pronounced functional differences among closely related species. An incredibly young adaptive radiation of three Cyprinodon species residing within hypersaline lakes in San Salvador Island, Bahamas, has recently been described. Characterized by distinct head shapes, gut content analyses revealed three discrete feeding modes in these species: basal detritivory as well as derived durophagy and lepidophagy (scale-feeding). We dissected, cleared and stained, and micro-CT scanned species to assess functionally relevant differences in craniofacial musculoskeletal elements. The widespread feeding mode previously described for cyprinodontiforms, in which the force of the bite may be secondary to the requisite dexterity needed to pick at food items, is modified within both the scale specialist and the durophagous species. -
Lecture 6 – Integument ‐ Scale • a Scale Is a Small Rigid Plate That Grows out of an Animal’ S Skin to Provide Protection
Lecture 6 – Integument ‐ Scale • A scale is a small rigid plate that grows out of an animal’s skin to provide protection. • Scales are quite common and have evolved multiple times with varying structure and function. • Scales are generally classified as part of an organism's integumentary system. • There are various types of scales according to shape and to class of animal. • Although the meat and organs of some species of fish are edible by humans, the scales are usually not eaten. Scale structure • Fish scales Fish scales are dermally derived, specifically in the mesoderm. This fact distinguishes them from reptile scales paleontologically. Genetically, the same genes involved in tooth and hair development in mammals are also involved in scale development. Earliest scales – heavily armoured thought to be like Chondrichthyans • Fossil fishes • ion reservoir • osmotic control • protection • Weighting Scale function • Primary function is protection (armor plating) • Hydrodynamics Scales are composed of four basic compounds: ((gmoving from inside to outside in that order) • Lamellar bone • Vascular or spongy bone • Dentine (dermis) and is always associated with enamel. • Acellular enamel (epidermis) • The scales of fish lie in pockets in the dermis and are embeded in connective tissue. • Scales do not stick out of a fish but are covered by the Epithelial layer. • The scales overlap and so form a protective flexible armor capable of withstanding blows and bumping. • In some catfishes and seahorses, scales are replaced by bony plates. • In some other species there are no scales at all. Evolution of scales Placoid scale – (Chondricthyes – cartilagenous fishes) develop in dermis but protrude through epidermis. -
History and Function of Scale Microornamentation in Lacertid Lizards
JOURNALOFMORPHOLOGY252:145–169(2002) HistoryandFunctionofScaleMicroornamentation inLacertidLizards E.N.Arnold* NaturalHistoryMuseum,CromwellRoad,LondonSW75BD,UK ABSTRACTDifferencesinsurfacestructure(ober- mostfrequentlyinformsfromdryhabitatsorformsthat hautchen)ofbodyscalesoflacertidlizardsinvolvecell climbinvegetationawayfromtheground,situations size,shapeandsurfaceprofile,presenceorabsenceoffine wheredirtadhesionislessofaproblem.Microornamen- pitting,formofcellmargins,andtheoccurrenceoflongi- tationdifferencesinvolvingotherpartsofthebodyand tudinalridgesandpustularprojections.Phylogeneticin- othersquamategroupstendtocorroboratethisfunctional formationindicatesthattheprimitivepatterninvolved interpretation.Microornamentationfeaturescandevelop narrowstrap-shapedcells,withlowposteriorlyoverlap- onlineagesindifferentordersandappeartoactadditively pingedgesandrelativelysmoothsurfaces.Deviations inreducingshine.Insomecasesdifferentcombinations fromthisconditionproduceamoresculpturedsurfaceand maybeoptimalsolutionsinparticularenvironments,but havedevelopedmanytimes,althoughsubsequentovert lineageeffects,suchaslimitedreversibilityanddifferent reversalsareuncommon.Likevariationsinscaleshape, developmentalproclivities,mayalsobeimportantintheir differentpatternsofdorsalbodymicroornamentationap- peartoconferdifferentandconflictingperformancead- genesis.Thefinepitsoftenfoundoncellsurfacesare vantages.Theprimitivepatternmayreducefrictiondur- unconnectedwithshinereduction,astheyaresmaller inglocomotionandalsoenhancesdirtshedding,especially thanthewavelengthsofmostvisiblelight.J.Morphol. -
1 Stomach Content Analysis of the Invasive Mayan Cichlid
Stomach Content Analysis of the Invasive Mayan Cichlid (Cichlasoma urophthalmus) in the Tampa Bay Watershed Ryan M. Tharp1* 1Department of Biology, The University of Tampa, 401 W. Kennedy Blvd. Tampa, FL 33606. *Corresponding Author – [email protected] Abstract - Throughout their native range in Mexico, Mayan Cichlids (Cichlasoma urophthalmus) have been documented to have a generalist diet consisting of fishes, invertebrates, and mainly plant material. In the Everglades ecosystem, invasive populations of Mayan Cichlids displayed an omnivorous diet dominated by fish and snails. Little is known about the ecology of invasive Mayan Cichlids in the fresh and brackish water habitats in the Tampa Bay watershed. During the summer and fall of 2018 and summer of 2019, adult and juvenile Mayan Cichlids were collected via hook-and-line with artificial lures or with cast nets in seven sites across the Tampa Bay watershed. Fish were fixed in 10% formalin, dissected, and stomach contents were sorted and preserved in 70% ethanol. After sorting, stomach contents were identified to the lowest taxonomic level possible and an Index of Relative Importance (IRI) was calculated for each taxon. The highest IRI values calculated for stomach contents of Mayan Cichlids collected in the Tampa Bay watershed were associated with gastropod mollusks in adults and ctenoid scales in juveniles. The data suggest that Mayan Cichlids in Tampa Bay were generalist carnivores. Introduction The Mayan Cichlid (Cichlasoma urophthalmus) was first described by Günther (1862) as a part of his Catalog of the Fishes in the British Museum. They are a tropical freshwater fish native to the Atlantic coast of Central America and can be found in habitats such as river drainages, lagoonal systems, and offshore cays (Paperno et al. -
Evolutionary Morphology of Trichomycterid Catfishes: About Hanging on and Digging In
CORE Metadata, citation and similar papers at core.ac.uk Provided by Ghent University Academic Bibliography 21/06/2011 - 10:33:20 Evolutionary morphology of trichomycterid catfishes: about hanging on and digging in Dominique Adriaens1, Jonathan N. Baskin2 & Hendrik Coppens1 1 Evolutionary Morphology of Vertebrates, Ghent University, K.L. Ledeganckstraat 35, B-9000 Gent, Belgium ([email protected]); 2 Biological Sciences Department, California State Polytechnic University Pomona, 3801 West Temple Avenue, Pomona, CA 91768, U.S.A ([email protected]) Number of pages: 39 Number of figures: 10 Number of tables: 0 Running title: Trichomycterid evolutionary morphology Key words: evolutionary morphology, Trichomycteridae, opercular system, Vandelliinae, Glanapteryginae, body elongation, fossorial Corresponding author: Dominique Adriaens Evolutionary Morphology of Vertebrates, Ghent University K.L. Ledeganckstraat 35, B-9000 Gent, Belgium [email protected] 1 21/06/2011 - 10:33:20 Abstract The catfishes (Siluriformes) comprise a particularly diverse teleost clade, from a taxonomic, morphological, biogeographical, ecological and behavioural perspective. The Neotropical Trichomycteridae (the “parasitic” catfishes) are emblematic of this diversity, including fishes with some of the most specialized habits and habitats among teleosts (e.g. hematophagy, lepidophagy, miniaturization, fossorial habitats, altitudinal extremes). Relatively little information is available on general trichomycterid morphology, as most work so far has concentrated on phylogenetically informative characters, with little concern about general descriptive anatomy. In this paper we provide a synthesis of new and previously-available data in order to build a general picture of basal crown group trichomycterid morphology and of its main modifications. We focus on the evolutionary morphology in two relatively distal trichomycterid lineages, i.e. -
Towards a Regional Information Base for Lake Tanganyika Research
RESEARCH FOR THE MANAGEMENT OF THE FISHERIES ON LAKE GCP/RAF/271/FIN-TD/Ol(En) TANGANYIKA GCP/RAF/271/FIN-TD/01 (En) January 1992 TOWARDS A REGIONAL INFORMATION BASE FOR LAKE TANGANYIKA RESEARCH by J. Eric Reynolds FINNISH INTERNATIONAL DEVELOPMENT AGENCY FOOD AND AGRICULTURE ORGANIZATION OF THE UNITED NATIONS Bujumbura, January 1992 The conclusions and recommendations given in this and other reports in the Research for the Management of the Fisheries on Lake Tanganyika Project series are those considered appropriate at the time of preparation. They may be modified in the light of further knowledge gained at subsequent stages of the Project. The designations employed and the presentation of material in this publication do not imply the expression of any opinion on the part of FAO or FINNIDA concerning the legal status of any country, territory, city or area, or concerning the determination of its frontiers or boundaries. PREFACE The Research for the Management of the Fisheries on Lake Tanganyika project (Tanganyika Research) became fully operational in January 1992. It is executed by the Food and Agriculture organization of the United Nations (FAO) and funded by the Finnish International Development Agency (FINNIDA). This project aims at the determination of the biological basis for fish production on Lake Tanganyika, in order to permit the formulation of a coherent lake-wide fisheries management policy for the four riparian States (Burundi, Tanzania, Zaïre and Zambia). Particular attention will be also given to the reinforcement of the skills and physical facilities of the fisheries research units in all four beneficiary countries as well as to the buildup of effective coordination mechanisms to ensure full collaboration between the Governments concerned. -
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CICHLIFORMES: Cichlidae (part 5) · 1 The ETYFish Project © Christopher Scharpf and Kenneth J. Lazara COMMENTS: v. 10.0 - 11 May 2021 Order CICHLIFORMES (part 5 of 8) Family CICHLIDAE Cichlids (part 5 of 7) Subfamily Pseudocrenilabrinae African Cichlids (Palaeoplex through Yssichromis) Palaeoplex Schedel, Kupriyanov, Katongo & Schliewen 2020 palaeoplex, a key concept in geoecodynamics representing the total genomic variation of a given species in a given landscape, the analysis of which theoretically allows for the reconstruction of that species’ history; since the distribution of P. palimpsest is tied to an ancient landscape (upper Congo River drainage, Zambia), the name refers to its potential to elucidate the complex landscape evolution of that region via its palaeoplex Palaeoplex palimpsest Schedel, Kupriyanov, Katongo & Schliewen 2020 named for how its palaeoplex (see genus) is like a palimpsest (a parchment manuscript page, common in medieval times that has been overwritten after layers of old handwritten letters had been scraped off, in which the old letters are often still visible), revealing how changes in its landscape and/or ecological conditions affected gene flow and left genetic signatures by overwriting the genome several times, whereas remnants of more ancient genomic signatures still persist in the background; this has led to contrasting hypotheses regarding this cichlid’s phylogenetic position Pallidochromis Turner 1994 pallidus, pale, referring to pale coloration of all specimens observed at the time; chromis, a name -
Ontogeny of Scale Feeding in the Asian Glassfish, Chanda Nama
Copeia, 2004(4), pp. 903±907 Ontogeny of Scale Feeding in the Asian Glass®sh, Chanda nama (Ambassidae) ARCHIS R. GRUBH AND KIRK O. WINEMILLER Dietary analysis of a population of the glass®sh Chanda nama from a wetland in southwestern India revealed facultative scale feeding (lepidophagy). In addition to ®sh scales, microcrustacea and aquatic insects were consumed by all size classes, with juvenile diets containing larger fractions of invertebrates. More scales were consumed during the wet season, the period when abundance of juvenile ®shes was greatest. Aquarium observations revealed how the glass®sh uses stealth and ambush tactics. Scales are dislodged by raking the extended lower jaw, distally armed with four curved conical teeth, across the ¯anks of prey. PECIALIZED scale feeding, or lepidophagy, (Major, 1973; Sazima and Uieda, 1980; Sazima, S is de®ned as the ingestion of scales without 1983). bones or ¯esh (Sazima, 1983). Lepidophagy has Roberts (1989) brie¯y described the denti- been described for seven Neotropical characid tion of two Asian glass®shes (Ambassidae, Per- genera (Roberts, 1970; Sazima, 1983; Vari, ciformes), Chanda nama from India and Para- 1986), three Neotropical trichomycterid genera doxodacna piratica from the Malay Peninsula and (Baskin et al., 1980), at least six African cichlid Western Borneo, presumed to feed on scales. genera (Fryer et al., 1955; Eccles and Lewis, Although the species were described as scale 1976; Liem and Stewart, 1976), an Australian feeders, no assessment of the degree of lepido- ariid cat®sh (Roberts, 1978), an Australian ter- phagy was provided for either species. Here we aponid (Whit®eld and Blaber, 1978), two caran- report for the ®rst time ontogenetic diet shifts gid genera (Major, 1973; Sazima and Uieda, involving scale feeding in C. -
Hyperspectral Data As a Biodiversity Screening Tool Can Differentiate
www.nature.com/scientificreports OPEN Hyperspectral data as a biodiversity screening tool can diferentiate among diverse Neotropical fshes M. A. Kolmann1,2*, M. Kalacska3, O. Lucanus4, L. Sousa5, D. Wainwright6, J. P. Arroyo‑Mora7 & M. C. Andrade8 Hyperspectral data encode information from electromagnetic radiation (i.e., color) of any object in the form of a spectral signature; these data can then be used to distinguish among materials or even map whole landscapes. Although hyperspectral data have been mostly used to study landscape ecology, foral diversity and many other applications in the natural sciences, we propose that spectral signatures can be used for rapid assessment of faunal biodiversity, akin to DNA barcoding and metabarcoding. We demonstrate that spectral signatures of individual, live fsh specimens can accurately capture species and clade‑level diferences in fsh coloration, specifcally among piranhas and pacus (Family Serrasalmidae), fshes with a long history of taxonomic confusion. We analyzed 47 serrasalmid species and could distinguish spectra among diferent species and clades, with the method sensitive enough to document changes in fsh coloration over ontogeny. Herbivorous pacu spectra were more like one another than they were to piranhas; however, our method also documented interspecifc variation in pacus that corresponds to cryptic lineages. While spectra do not serve as an alternative to the collection of curated specimens, hyperspectral data of fshes in the feld should help clarify which specimens might be unique or undescribed, complementing existing molecular and morphological techniques. Te biological sciences face two dire and disturbing issues: (1) increases in extinctions of animals across all con- tinents and oceans1–4, as well as (2) a shrinking pool of taxonomists trained to identify these organisms 5–7.