University of Nebraska - Lincoln DigitalCommons@University of Nebraska - Lincoln U.S. Department of Agriculture: Agricultural Publications from USDA-ARS / UNL Faculty Research Service, Lincoln, Nebraska 5-6-2019 Using RNA-seq to characterize responses to 4 hydroxyphenylpyruvate dioxygenase (HPPD) inhibitor herbicide resistance in waterhemp (Amaranthus tuberculatus) Daniel R. Kohlhase Iowa State University Jamie A. O’Rourke (USDA)–Agricultural Research Service Micheal D. K. Owen Iowa State University,
[email protected] Michelle A. Graham (USDA)–Agricultural Research Service,
[email protected] Follow this and additional works at: https://digitalcommons.unl.edu/usdaarsfacpub Kohlhase, Daniel R.; O’Rourke, Jamie A.; Owen, Micheal D. K.; and Graham, Michelle A., "Using RNA-seq to characterize responses to 4 hydroxyphenylpyruvate dioxygenase (HPPD) inhibitor herbicide resistance in waterhemp (Amaranthus tuberculatus)" (2019). Publications from USDA-ARS / UNL Faculty. 2163. https://digitalcommons.unl.edu/usdaarsfacpub/2163 This Article is brought to you for free and open access by the U.S. Department of Agriculture: Agricultural Research Service, Lincoln, Nebraska at DigitalCommons@University of Nebraska - Lincoln. It has been accepted for inclusion in Publications from USDA-ARS / UNL Faculty by an authorized administrator of DigitalCommons@University of Nebraska - Lincoln. Kohlhase et al. BMC Plant Biology (2019) 19:182 https://doi.org/10.1186/s12870-019-1795-x RESEARCH ARTICLE Open Access Using RNA-seq to characterize responses to 4-hydroxyphenylpyruvate dioxygenase (HPPD) inhibitor herbicide resistance in waterhemp (Amaranthus tuberculatus) Daniel R. Kohlhase1, Jamie A. O’Rourke2, Micheal D. K. Owen1* and Michelle A. Graham2* Abstract Background: Waterhemp (Amaranthus tuberculatus (Moq.) J.D. Sauer) is a problem weed commonly found in the Midwestern United States that can cause crippling yield losses for both maize (Zea mays L.) and soybean (Glycine max L.