Project Summary: Thee River Rehabilitation
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Feature: INTRODUCED FISH and ECOLOGY
Feature: INTRODUCED FISH AND ECOLOGY Ecological Impacts of Non-native Freshwater Fishes Julien Cucherousset Centre for Conservation Ecology and Environmental Change, School of Applied Sciences, Bournemouth University, Poole, Dorset, United Kingdom Impactos Ecológicos de Peces Foráneos CNRS, UPS, ENFA, UMR5174 EDB (Laboratoire Évolution et Diversité de Agua Dulce Biologique), 118 route de Narbonne, F-31062 Toulouse, France Université de Toulouse, UPS, UMR5174 EDB, F-31062 Toulouse, France RESUMEN: Hay una larga historia de introducciones de especies de peces foráneos de agua dulce y la tasa Julian D. Olden de introducción se ha acelerado considerablemente a School of Aquatic and Fishery Sciences, University of Washington, través del tiempo. Si bien no todos los peces introduci- Box 355020, Seattle, Washington 98195, USA (Address correspondence dos tienen efectos notables en sus nuevos ecosistemas, to [email protected]) muchos de ellos ejercen importantes impactos ecológi- cos, evolutivos y económicos. Para los investigadores, ABSTRACT: There is a long history of introduction of non-native administradores y tomadores de decisiones que están in- fishes in fresh waters and the introduction rate has accelerated great- teresados en la conservación de la diversidad dulceacuí- ly over time. Although not all introduced fishes have appreciable cola, es de suma importancia entender la magnitud y effects on their new ecosystems, many exert significant ecological, alcance de los potenciales impactos de especies foráneas evolutionary, and economic impacts. For researchers, managers, de agua dulce. El presente estudio provee un panorama and policy makers interested in conserving freshwater diversity, un- de la literatura más reciente sobre impactos ecológicos derstanding the magnitude and array of potential impacts of non-na- asociados a la introducción de peces foráneos de agua tive fish species is of utmost importance. -
Freshwater Fishes
WESTERN CAPE PROVINCE state oF BIODIVERSITY 2007 TABLE OF CONTENTS Chapter 1 Introduction 2 Chapter 2 Methods 17 Chapter 3 Freshwater fishes 18 Chapter 4 Amphibians 36 Chapter 5 Reptiles 55 Chapter 6 Mammals 75 Chapter 7 Avifauna 89 Chapter 8 Flora & Vegetation 112 Chapter 9 Land and Protected Areas 139 Chapter 10 Status of River Health 159 Cover page photographs by Andrew Turner (CapeNature), Roger Bills (SAIAB) & Wicus Leeuwner. ISBN 978-0-620-39289-1 SCIENTIFIC SERVICES 2 Western Cape Province State of Biodiversity 2007 CHAPTER 1 INTRODUCTION Andrew Turner [email protected] 1 “We live at a historic moment, a time in which the world’s biological diversity is being rapidly destroyed. The present geological period has more species than any other, yet the current rate of extinction of species is greater now than at any time in the past. Ecosystems and communities are being degraded and destroyed, and species are being driven to extinction. The species that persist are losing genetic variation as the number of individuals in populations shrinks, unique populations and subspecies are destroyed, and remaining populations become increasingly isolated from one another. The cause of this loss of biological diversity at all levels is the range of human activity that alters and destroys natural habitats to suit human needs.” (Primack, 2002). CapeNature launched its State of Biodiversity Programme (SoBP) to assess and monitor the state of biodiversity in the Western Cape in 1999. This programme delivered its first report in 2002 and these reports are updated every five years. The current report (2007) reports on the changes to the state of vertebrate biodiversity and land under conservation usage. -
Evidence of Hidden Diversity and Taxonomic Conflicts in Five Stream Fishes from the Eastern Zimbabwe Highlands Freshwater Ecoregion
A peer-reviewed open-access journal ZooKeys 768: 69–95Evidence (2018) of hidden diversity and taxonomic conflicts in five stream fishes... 69 doi: 10.3897/zookeys.768.21944 RESEARCH ARTICLE http://zookeys.pensoft.net Launched to accelerate biodiversity research Evidence of hidden diversity and taxonomic conflicts in five stream fishes from the Eastern Zimbabwe Highlands freshwater ecoregion Albert Chakona1,2, Wilbert T. Kadye2, Taurai Bere3, Daniel N. Mazungula1,2, Emmanuel Vreven4,5 1 South African Institute for Aquatic Biodiversity, Private Bag 1015, Grahamstown, South Africa, 6140 2 Department of Ichthyology and Fisheries Science, Rhodes University, P.O. Box 94, Grahamstown, South Africa, 6140 3 School of Wildlife, Ecology and Conservation, Chinhoyi University of Technology, P. Bag 7724, Chinhoyi, Zimbabwe 4 Royal Museum for Central Africa, Section of Vertebrates, Ichthyology, Leuvensesteenweg 13, 3080, Tervuren, Belgium 5 KU Leuven, Department of Biology, Laboratory of Biodiversity and Evolutio- nary Genomics, Deberiotstraat 32, 3000 Leuven, Belgium Corresponding author: Albert Chakona ([email protected]) Academic editor: N. Bogutskaya | Received 30 October 2018 | Accepted 25 April 2018 | Published 19 June 2018 http://zoobank.org/9621930C-8C43-40D0-8554-684035E99FAA Citation: Chakona A, Kadye WT, Bere T, Mazungula DN, Vreven E (2018) Evidence of hidden diversity and taxonomic conflicts in five stream fishes from the Eastern Zimbabwe Highlands freshwater ecoregion. ZooKeys 768: 69–95. https://doi.org/10.3897/zookeys.768.21944 Abstract -
DNA Barcoding Discriminates Freshwater Fishes from Southeastern Nigeria and Provides River System-Level Phylogeographic Resoluti
Mitochondrial DNA, 2011; Early Online: 1–9 DNA barcoding discriminates freshwater fishes from southeastern Nigeria and provides river system-level phylogeographic resolution within some species CHRISTOPHER D. NWANIa, SVEN BECKERb, HEATHER E. BRAIDb, EMMANUEL F. UDEc, OKECHUKWU I. OKOGWUa, & ROBERT HANNERb aDepartment of Applied Biology, Ebonyi State University, Abakaliki, Nigeria, bDepartment of Integrative Biology, Biodiversity Institute of Ontario, University of Guelph, Guelph, Ontario, Canada, and cFisheries and Aquaculture, Ebonyi State University, Abakaliki, Nigeria (Received 17 August 2010; revised 28 October 2010; accepted 28 October 2010) Abstract Background and aims: Fishes are the main animal protein source for human beings and play a vital role in aquatic ecosystems and food webs. Fish identification can be challenging, especially in the tropics (due to high diversity), and this is particularly true for larval forms or fragmentary remains. DNA barcoding, which uses the 50 region of the mitochondrial cytochrome c oxidase subunit I (cox1) as a target gene, is an efficient method for standardized species-level identification for biodiversity assessment and conservation, pending the establishment of reference sequence libraries. Materials and methods: In this study, fishes were collected from three rivers in southeastern Nigeria, identified morphologically, and imaged digitally. DNA was extracted, PCR-amplified, and the standard barcode region was bidirectionally sequenced for 363 individuals belonging to 70 species in 38 genera. All specimen provenance data and associated sequence information were For personal use only. recorded in the barcode of life data systems (BOLD; www.barcodinglife.org). Analytical tools on BOLD were used to assess the performance of barcoding to identify species. Results: Using neighbor-joining distance comparison, the average genetic distance was 60-fold higher between species than within species, as pairwise genetic distance estimates averaged 10.29% among congeners and only 0.17% among conspecifics. -
The Thermal Tolerance and Preference Of
The thermal tolerances and preferences of native fish in the Cape Floristic Region: towards understanding the effect of climate change on native fish species by Jody-Lee Reizenberg Town Thesis presented for the Degree of Master of Science Cape in the Department of Biological Sciences University of Cape Town March 2017 Supervisors: Dr Helen Dallas, Dr Jeremy Shelton, and Dr Cecile Reed University The copyright of this thesis vests in the author. No quotation from it or information derived from it is to be published without full acknowledgement of the source. The thesis is to be used for private study or non- commercial research purposes only. Published by the University of Cape Town (UCT) in terms of the non-exclusive license granted to UCT by the author. University of Cape Town DECLARATION I hereby declare that the work on which this thesis is based is my original work (except where acknowledgements indicate otherwise) and that neither the whole work nor any part of it has been, is being, or is to be submitted for another degree in this or any other university. I authorise the University to reproduce for the purpose of research either the whole or any portion of the contents in any manner whatsoever. This thesis reports original research carried out under the Department of Biological Sciences, Faculty of Science, University of Cape Town, between 2015 and 2016 for the M.Sc. study purpose. The data presented here are my own. I have fully acknowledged any assistance received. I know the meaning of plagiarism and declare that all of the work in the dissertation, save for that which is properly acknowledged, is my own. -
INDIGENOUS FISH for a GARDEN POND by Ernst Van Jaarsveld, Kirstenbosch
The Otjikoto tilapia (Tilapia guinasana) an endangered fish endemic to Lakes Guinas and Otjikoto in northern Namibia. Illustration by Dave Voorvelt from Paul Skeltons book Freshwater fishes ofsouthern Africa. Below left. Kirstenbosch Visitor's Centre fishpond. Photo: E. van Jaarsveld. INDIGENOUS FISH FOR A GARDEN POND by Ernst van Jaarsveld, Kirstenbosch ccording to Freshwater fishes of southern Africa (like running water). The behaviour of fish, when stocked (Skelton 1993) there are 245 indigenous freshwater with more than one species, must also be taken into A fish species in southern Africa. Some are very consideration as some are aggressive and will kill other fish attractive and suitable for fishponds and aquariums. In species. Traditionally goldfish (Carassius auratus) and khoi selecting indigenous fish for a pond, just as it is with (Cyprinus carpio) are the most popular ornamental fish plants, it is always better to choose a local indigenous species throughout the world. They are hardy, and tolerant species. Like plants, some fish are easy to keep and breed of a wide range of conditions, brightly coloured and easy to from, while others require specialized conditions breed from. The Otjikoto tilapia When the fishpond of the new Visitor's Centre at Kirstenbosch was completed, we had to decide what indigenous plants and indigenous fish species to put in it. The other ponds at Kirstenbosch have the vleikurper (Tilapia sparrmanii), Cape kurper (Sandelia capensis) and the small inconspicuous local indigenous Cape galaxias (Galaxias .zebrata). All these species are highly successful and self sustaining. But we wanted to introduce an indigenous fish that was colourful, interesting and bred easily, yet was also a rare endemic, so that visitors could see that it is not only plants that are often endemic to a small region. -
Indigenous Fish Fact Sheet
FACT SHEET What a landowner should know about the INDIGENOUS FISH of the Cape Floristic Region: DIVERSITY, THREATS AND MANAGEMENT INTERVENTIONS The majority of the freshwater The Cape Floristic Region, mainly within the Western Cape Province, fish of the Cape Floristic is one of the six plant kingdoms of the world. This area, however, is Region are listed as either not only home to a remarkable number of plant species but also has a Endangered or Critically Endangered and face a very number of unique indigenous freshwater fish species. real risk of extinction! INDIGENOUS FISH are a critical component of healthy aquatic ecosystems as they form an important part of the aquatic food web and fulfill several important ecological functions. These fish need suitable habitat and good quality water, free of sediment and agrichemicals, in order to survive. The presence of indigenous fish is one of the signs of a healthy riverine Cape kurper ecosystem, making indigenous fish good bio-indicators of healthy rivers. There are four main river systems in the Western Cape, namely the Berg, Breede, Gourits and Olifants, and each system has unique fish species which only occur in ecologically healthy parts of these rivers. A good example is Burchell’s redfin in the Breede and neighbouring river systems. Genetic research on this species indicates that there could be three distinct species in the Cape galaxias Breede system. The Olifants River system is however recognised as the hotspot for indig- enous fish diversity as this system has the highest number of unique indigenous species. Research is ongoing and further genetic diversity is being uncovered for other species such as the Cape kurper and the Cape galaxias. -
Proceedings of the 8Th Yellowfish Working Group Conference
FOSAF THE FEDERATION OF SOUTHERN AFRICAN FLYFISHERS PROCEEDINGS OF THE 8TH YELLOWFISH WORKING GROUP CONFERENCE LE PARADISE RESORT, BADPLAAS 13 – 15 MAY 2004 Edited by Peter Arderne PRINTING & DISTRIBUTION SPONSORED BY: sappi CONTENTS Page List of Participants 2 Press Release 4 Welcome address -Bill Mincher (presented by Peter Mills) 6 Fishing Strategies & Tactics for the Nine Yellowfish species – Turner Wilkinson 8 Keynote Address: Mpumalanga Parks Board – Andre Coetzee 10 South African Freshwater Resources: Rights, Duties & Remedies – Morne Viljoen 11 Towards the fomulation of a Waste Discharge Charge System for South Africa - 24 Pieter Viljoen Catchment Management Approach to Conservation: What does it mean? – 34 Dr Wynand Vlok Establishment of the Elands River Conservation Area (ERYCA) – Gordon O’Brien 38 The Effect of Alien Plant Species on the Riparian Zone Water Management – 43 Hannes de Lange & Tony Poulter Fish kills in the Olifants River: Any Solution? – Dr Thomas Gyedu-Ababio 45 Yellowfish Sport Fisheries: Opportunities & Responsibilities – Kobus Fourie 48 Conservancies – A tool for river conservation involving the landowner – Peter Mills 49 Proposed project: Radio Telemetry on Labeobarbus marequensis in the Crocodile River, 54 Kruger National Park – Francois Roux The yellowfish fishery on the upper Komati: A landowners perspective – John Clarke 56 River Health: Managing and Monitoring Rivers on Sappi Plantations – Douglas 60 Macfarlane Iscor Newcastle: Water Strategy – Martin Bezuidenhout 63 Aquatic Biodiversity Conservation in South Africa – Pierre de Villiers 66 Field research update: Assessing the impact of smallmouth bass on the indigenous 67 fish community of the Rondegat River, Western Cape – Darragh Woodford Threatened fishes of Swaziland – Richard Boycott 70 Yellowfishes of Zambia & Mozambique – Roger Bills 76 Identification of conservation units of two yellowfish species: Labeobarbus 78 kimberleyensis & L. -
Deficiencies in Our Understanding of the Hydro-Ecology of Several Native Australian Fish: a Rapid Evidence Synthesis
Marine and Freshwater Research, 2018, 69, 1208–1221 © CSIRO 2018 https://doi.org/10.1071/MF17241 Supplementary material Deficiencies in our understanding of the hydro-ecology of several native Australian fish: a rapid evidence synthesis Kimberly A. MillerA,D, Roser Casas-MuletB,A, Siobhan C. de LittleA, Michael J. StewardsonA, Wayne M. KosterC and J. Angus WebbA,E ADepartment of Infrastructure Engineering, The University of Melbourne, Parkville, Vic. 3010, Australia. BWater Research Institute, Cardiff University, The Sir Martin Evans Building, Museum Avenue, Cardiff, CF10 3AX, UK. CArthur Rylah Institute for Environmental Research, Department of Environment, Land, Water and Planning, Heidelberg, Vic. 3084, Australia. DPresent address: Healesville Sanctuary, Badger Creek Road, Healesville, Vic. 3777, Australia. ECorresponding author. Email address: [email protected] Page 1 of 30 Marine and Freshwater Research © CSIRO 2018 https://doi.org/10.1071/MF17241 Table S1. All papers located by standardised searches and following citation trails for the two rapid evidence assessments All papers are marked as Relevant or Irrelevant based on a reading of the title and abstract. Those deemed relevant on the first screen are marked as Relevant or Irrelevant based on a full assessment of the reference.The table contains incomplete citation details for a number of irrelevant papers. The information provided is as returned from the different evidence databases. Given that these references were not relevant to our review, we have not sought out the full citation details. Source Reference Relevance Relevance (based on title (after reading and abstract) full text) Pygmy perch & carp gudgeons Search hit Anon (1998) Soy protein-based formulas: recommendations for use in infant feeding. -
Historical Abiotic Events Or Human‐Aided Dispersal
Historical abiotic events or human-aided dispersal: inferring the evolutionary history of a newly discovered galaxiid fish Gamuchirai Chakona1,2, Ernst R. Swartz2 & Albert Chakona2 1Department of Ichthyology and Fisheries Science, Rhodes University, P. O. Box 94, Grahamstown 6140, South Africa 2South African Institute for Aquatic Biodiversity, Private Bag 1015, Grahamstown 6140, South Africa Keywords Abstract Cape Floristic Region, Galaxias, interbasin dispersal, mitochondrial DNA, nuclear DNA, Range expansion of obligate freshwater fishes in the Cape Floristic Region phylogeography. (CFR) of South Africa has mostly been attributed to river capture events and confluence of rivers following sea-level regression. The role of low drainage Correspondence divides and interbasin water transfers has received less attention. This study Gamuchirai Chakona, South African Institute analyzed mitochondrial and nuclear DNA sequences to assess the processes that for Aquatic Biodiversity, Private Bag 1015, could have influenced the phylogeographic patterns of a newly discovered line- Grahamstown 6140, South Africa Tel: 046 6035800; Fax: +27 46 622 2403; age of Galaxias zebratus (hereafter Galaxias zebratus “Joubertina”) that occurs E-mail: [email protected] across two currently isolated river systems close to the Joubertina area in the eastern CFR. Results from both analyses revealed that observed genetic differen- Funding Information tiation cannot be explained by isolation between the two river systems. No Funding was provided by the South African genetic differentiation was found between the Krom River system and a popula- Institute for Aquatic Biodiversity (SAIAB) and tion from one of the Gamtoos tributaries. Shallow genetic differentiation was the Rhodes University Margaret Smith found between the Krom and the other Gamtoos populations. -
Aspects of the Phylogeny, Biogeography and Taxonomy of Galaxioid Fishes
Aspects of the phylogeny, biogeography and taxonomy of galaxioid fishes Jonathan Michael Waters, BSc. (Hons.) Submitted in fulfilment of the requirements for the degree of Doctor of Philosophy, / 2- Oo ( 01 f University of Tasmania (August, 1996) Paragalaxias dissim1/is (Regan); illustrated by David Crook Statements I declare that this thesis contains no material which has been accepted for the award of any other degree or diploma in any tertiary institution and, to the best of my knowledge and belief, this thesis contains no material previously published o:r written by another person, except where due reference is made in the text. This thesis is not to be made available for loan or copying for two years following the date this statement is signed. Following that time the thesis may be made available for loan and limited copying in accordance with the Copyright Act 1968. Signed Summary This study used two distinct methods to infer phylogenetic relationships of members of the Galaxioidea. The first approach involved direct sequencing of mitochondrial DNA to produce a molecular phylogeny. Secondly, a thorough osteological study of the galaxiines was the basis of a cladistic analysis to produce a morphological phylogeny. Phylogenetic analysis of 303 base pairs of mitochondrial cytochrome b _supported the monophyly of Neochanna, Paragalaxias and Galaxiella. This gene also reinforced recognised groups such as Galaxias truttaceus-G. auratus and G. fasciatus-G. argenteus. In a previously unrecognised grouping, Galaxias olidus and G. parvus were united as a sister clade to Paragalaxias. In addition, Nesogalaxias neocaledonicus and G. paucispondylus were included in a clade containing G. -
Alien Fish Removals: a New Beginning for the Rondegat River
Alien fish removals: A new beginning for the Rondegat River Olaf Weyl tells QUEST how rivers are being rehabilitated after alien invasions. he Cape Floristic Region of South Africa is a global biodiversity hotspot with an exceptional degree of Tbiodiversity and endemism. Better known for its rich plant communities, the region is also home to 17 fish species which occur nowhere else on earth. Most are restricted to a single river or tributary within a river, which makes them particularly vulnerable to human impacts such as alien fish introductions, habitat destruction, and pollution. Human impacts are particularly severe in lowland rivers which receive run- off from agricultural and urban areas or modified by canal and dam building. This has caused many of our indigenous fishes to now only occur in small headwater streams located high up in mountain catchments where these impacts are absent. More than half of the endemic fishes in A collage showing the indigenous fish of the Cape Floristic Region. Image: Olaf Weyl South Africa are considered to be in imminent danger of extinction Top: Rhodes University Department of Ichthyology and Fisheries Science BSc Honours class of 2015 and have been IUCN Red-listed assisting with electrofishing surveys to determine Clanwilliam rock catfish abundance. Image: Olaf Weyl 11|2 2015 11 A school of fiery redfin minnows (Pseudobarbus phlegethon). Image: Olaf Weyl as Endangered and Critically Endangered. The rivers in the Cape Floristic Region are key areas for conservation of biodiversity and in headwater refuges the main threat to the native fishes are alien fish introductions. Sport fishing Indigenous fish in the Cape Floristic Region are typically small, insectivorous species.