Diversity and Physiology of Marine Lignicolous Fungi in Arctic Waters: a Preliminary Account Ka-Lai Pang1, Raymond K.K
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Morphological and Phylogenetic Analyses of Nia Vibrissa, a Marine
Regional Studies in Marine Science ( ) – Contents lists available at ScienceDirect Regional Studies in Marine Science journal homepage: www.elsevier.com/locate/rsma Morphological and phylogenetic analyses of Nia vibrissa, a marine Basidiomycota collected in Portuguese waters Egídia Azevedo a,b, *, Margarida Barata b,c , Maria Filomena Caeiro a,c a Centro de Estudos do Ambiente e do Mar (CESAM), Faculdade de Ciências, Universidade de Lisboa, Campo Grande, 1749-016 Lisboa, Portugal b Centro de Ecologia, Evolução e Alterações climáticas (CE3C), Faculdade de Ciências, Universidade de Lisboa, Campo Grande, 1749-016 Lisboa, Portugal c Departamento de Biologia Vegetal, Faculdade de Ciências, Universidade de Lisboa, 1749-016 Lisboa, Portugal article info a b s t r a c t Article history: This study presents morphological and phylogenetic characterizations of Nia vibrissa specimens detected Received 1 March 2017 on Fagus sylvatica baits, after six months of incubation in moist chambers at the laboratory. The baits had Received in revised form 19 December 2017 been submerged at Cascais marina, Portugal, during a survey carried out in 2006–2008. Morphological Accepted 28 December 2017 observations evidenced differences in basidiocarp color and in the morphology of the peridial hairs, Available online xxxx varying from straight to curved and with bifurcate to non-bifurcate ends. Morphological variability has Keywords: often been reported, associated to the suggestion that N. vibrissa is a species complex. We addressed Basidiocarp this subject through the evaluation of pairwise distances and phylogenetic analyses applying Bayesian Marine fungi and Maximum Likelihood methods, to multi-sequence alignments involving the large subunit (LSU) of Nuc LSU region the nuclear ribosomal DNA. -
Jéssica Beatriz Anastácio Jacinto Zalerion Maritimum and Nia
Universidade de Departamento de Química Aveiro 2017-2018 Jéssica Beatriz Zalerion maritimum and Nia vibrissa potential for Anastácio Jacinto expanded polystyrene (EPS) biodegradation Avaliação do potencial de Zalerion maritimum e Nia vibrissa para a biodegradação de poliestireno expandido (EPS) Universidade de Departamento de Química Aveiro 2017-2018 Jéssica Beatriz Avaliação do potencial de Zalerion maritimum e Anastácio Jacinto Nia vibrissa para a biodegradação de poliestireno expandido (EPS) Zalerion maritimum and Nia vibrissa potential for expanded polystyrene (EPS) biodegradation Dissertação apresentada à Universidade de Aveiro para cumprimento dos requisitos necessários à obtenção do grau de Mestre em Biotecnologia Industrial e Ambiental realizada sob a orientação científica do Doutor João Pinto da Costa, Investigador em Pós-Doutoramento do Departamento de Química da Universidade de Aveiro e da Doutora Teresa Rocha Santos, Investigadora Principal do Departamento de Química e do Laboratório Associado CESAM (Centro de Estudos do Ambiente e do Mar) da Universidade de Aveiro Este trabalho foi financiado pelo CESAM (UID/AMB/50017) e FCT/MEC através de fundos nacionais e co-financiado pela FEDER, dentro do programa PT2020 Partnership Agreement e Compete 2020. Foi ainda financiado por fundos nacionais através da FCT/MEC (PIDDAC) sob o projeto IF/00407/2013/CP1162/CT0023 e co-financiado pela FEDER, ao abrigo do projeto PT2020 Partnership Agreement e Compete2020 POCI- 01-0145-FEDER-028740. Realizado ainda graças ao apoio da FCT através da bolsa SFRH/BPD/122538/2016 sob os fundos POCH, co- financiada pela European Social Fund e Portuguese National Funds, MEC. ii Azul poético Ela está morta. Morta em azul poético, azul revolucionário. -
Biodiversity and Characterization of Marine Mycota from Portuguese Waters
Animal Biodiversity and Conservation 34.1 (2011) 205 Biodiversity and characterization of marine mycota from Portuguese waters E. Azevedo, M. F. Caeiro, R. Rebelo & M. Barata Azevedo, E., Caeiro, M. F., Rebelo, R. & Barata, M., 2011. Biodiversity and characterization of marine mycota from Portuguese waters. Animal Biodiversity and Conservation, 34.1: 205–215. Abstract Biodiversity and characterization of marine mycota from Portuguese waters.— The occurrence, diversity and similarity of marine fungi detected by the sum of direct and indirect observations in Fagus sylvatica and Pinus pinaster baits submerged at two Portuguese marinas are analyzed and discussed. In comparison with the data already published in 2010, the higher number of specimens considered in this study led to the higher number of very frequent taxa for these environments and substrata; the significant difference in substrata and also in fungal diversity detected at the two environments is also highlighted, in addition to the decrease in fungal similarity. Because the identification of Lulworthia spp., Fusarium sp., Graphium sp., Phoma sp. and Stachybotrys sp. down to species level was not possible, based only on the morphological characterization, a molecular approach based on the amplification of the LSU rDNA region was performed with isolates of these fungi. This was achieved for three isolates, identified as Fusarium solani, Graphium eumorphum and Stachybotrys chartarum. To achieve this with the other isolates which are more complex taxa, the sequencing of more regions will be considered. Key words: Marine fungi, Wood baits, Fungal diversity, Ascomycota, Anamorphic fungi, Sequence alignment. Resumen Biodiversidad y caracterización de los hongos marinos de las aguas portuguesas.— Se analiza y discute la presencia, la diversidad y la similitud de los hongos marinos detectados mediante la suma de observaciones directas e indirectas utilizando cebos de Fagus sylvatica y Pinus pinaster sumergidos en dos puertos deportivos portugueses. -
Fungal Cannons: Explosive Spore Discharge in the Ascomycota Frances Trail
MINIREVIEW Fungal cannons: explosive spore discharge in the Ascomycota Frances Trail Department of Plant Biology and Department of Plant Pathology, Michigan State University, East Lansing, MI, USA Correspondence: Frances Trail, Department Abstract Downloaded from https://academic.oup.com/femsle/article/276/1/12/593867 by guest on 24 September 2021 of Plant Biology, Michigan State University, East Lansing, MI 48824, USA. Tel.: 11 517 The ascomycetous fungi produce prodigious amounts of spores through both 432 2939; fax: 11 517 353 1926; asexual and sexual reproduction. Their sexual spores (ascospores) develop within e-mail: [email protected] tubular sacs called asci that act as small water cannons and expel the spores into the air. Dispersal of spores by forcible discharge is important for dissemination of Received 15 June 2007; revised 28 July 2007; many fungal plant diseases and for the dispersal of many saprophytic fungi. The accepted 30 July 2007. mechanism has long been thought to be driven by turgor pressure within the First published online 3 September 2007. extending ascus; however, relatively little genetic and physiological work has been carried out on the mechanism. Recent studies have measured the pressures within DOI:10.1111/j.1574-6968.2007.00900.x the ascus and quantified the components of the ascus epiplasmic fluid that contribute to the osmotic potential. Few species have been examined in detail, Editor: Richard Staples but the results indicate diversity in ascus function that reflects ascus size, fruiting Keywords body type, and the niche of the particular species. ascus; ascospore; turgor pressure; perithecium; apothecium. 2 and 3). Each subphylum contains members that forcibly Introduction discharge their spores. -
A New Poroid Species of Resupinatus from Puerto Rico, with a Reassessment of the Cyphelloid Genus Stigmatolemma
Mycologia, 97(5), 2005, pp. 000–000. # 2005 by The Mycological Society of America, Lawrence, KS 66044-8897 A new poroid species of Resupinatus from Puerto Rico, with a reassessment of the cyphelloid genus Stigmatolemma R. Greg Thorn1 their place in the cyphellaceous genus Stigmatolemma…’’ Department of Biology, University of Western Ontario, (Donk 1966) London, Ontario, N6A 5B7 Canada Jean-Marc Moncalvo INTRODUCTION Centre for Biodiversity and Conservation Biology, Royal Ontario Museum and Department of Botany, University Resupinatus S.F. Gray is a small genus of euagarics of Toronto, Toronto, Ontario, M5S 2C6 Canada (Hibbett and Thorn 2001) with 49 specific and Scott A. Redhead varietal epithets as of Apr 2005, excluding autonyms Systematic Mycology and Botany Section, Eastern Cereal and invalid names (www.indexfungorum.org). Fruit- and Oilseed Research, Agriculture and Agri-Food ing bodies of Resupinatus are small—a few mm to Canada, Ottawa, Ontario, K1A 0C6 Canada 2 cm in breadth—and generally pendent or resupi- D. Jean Lodge nate on the undersides of rotting logs and other Center for Forest Mycology Research, USDA Forest woody materials or herbaceous debris. Historically, Service-FPL, P.O. Box 1377, Luquillo, Puerto Rico, members of Resupinatus were treated within the USA 00773-1377 broad concept of Pleurotus (Fr.) P. Kumm. (e.g. Pila´t 1935, Coker, 1944). In modern times, the genus has Marı´a P. Martı´n been characterized by a gelatinous zone in the pileus, Real Jardı´n Bota´nico, CSIC, Plaza de Murillo 2, 28014 Madrid, Spain hyaline inamyloid spores and the absence of metuloid cystidia. The genus Hohenbuehelia Schulzer shares the gelatinized layer and inamyloid spores, but has Abstract: A fungus with gelatinous poroid fruiting metuloid cystidia (Singer 1986, Thorn and Barron bodies was found in Puerto Rico and determined by 1986). -
Re-Thinking the Classification of Corticioid Fungi
mycological research 111 (2007) 1040–1063 journal homepage: www.elsevier.com/locate/mycres Re-thinking the classification of corticioid fungi Karl-Henrik LARSSON Go¨teborg University, Department of Plant and Environmental Sciences, Box 461, SE 405 30 Go¨teborg, Sweden article info abstract Article history: Corticioid fungi are basidiomycetes with effused basidiomata, a smooth, merulioid or Received 30 November 2005 hydnoid hymenophore, and holobasidia. These fungi used to be classified as a single Received in revised form family, Corticiaceae, but molecular phylogenetic analyses have shown that corticioid fungi 29 June 2007 are distributed among all major clades within Agaricomycetes. There is a relative consensus Accepted 7 August 2007 concerning the higher order classification of basidiomycetes down to order. This paper Published online 16 August 2007 presents a phylogenetic classification for corticioid fungi at the family level. Fifty putative Corresponding Editor: families were identified from published phylogenies and preliminary analyses of unpub- Scott LaGreca lished sequence data. A dataset with 178 terminal taxa was compiled and subjected to phy- logenetic analyses using MP and Bayesian inference. From the analyses, 41 strongly Keywords: supported and three unsupported clades were identified. These clades are treated as fam- Agaricomycetes ilies in a Linnean hierarchical classification and each family is briefly described. Three ad- Basidiomycota ditional families not covered by the phylogenetic analyses are also included in the Molecular systematics classification. All accepted corticioid genera are either referred to one of the families or Phylogeny listed as incertae sedis. Taxonomy ª 2007 The British Mycological Society. Published by Elsevier Ltd. All rights reserved. Introduction develop a downward-facing basidioma. -
Fishery Circular
398 NOAA Technical Report NMFS Circular 398 Marine Flora and Fauna of the Northeastern United States ^^ Higher Fungi: Ascomycetes, ^^ATEs OV Deuteromycetes, and Basidiomycetes A. R. Cavaliere March 1977 U.S. DEPARTMENT OF COMMERCE National Oceanic and Atmospheric Administration National Marine Fisheries Service NOAA TECHNICAL REPORTS National Marine Fisheries Service, Circulars The major responsibilities of the National Marine Fisheries Service (NMFSl are to monitor and assess the abundance and geographic distribution of fishery resources, to understand and predict fluctuations in the quantity and distribution of these resources, and to establish levels for optimum use of the resources. NMFS is also charged with the development and implementation of policies for managing national fishing grounds, development and enforcement of domestic fisheries regulations, surveillance of foreign fishing off United States coastal waters, and the development and enforcement of international fishePi' agreements and policies. NMFS also assists the fishing industry through marketing service and economic analysis programs, and mortgage insurance and vessel construction subsidies. It collects, analyzes, and publishes statistics on various phases of the industry. The NOAA Technical Report NMFS Circular series continues a series that has been in existence since 1941. The Circulars are technical publications of general interest intended to aid conservation and management. Publications that review in considerable detail and at a high technical level certain broad areas of research appear in this series. Technical papers originating in economics studies and from management in- vestigations appear in the Circular series. NOAA Technical Report NMFS Circulars are available free in limited numbers to governmental agencies, both Federal and State. They are also available in exchange for other scientific and technical publications in the marine sciences. -
The Mechanism of Ascus Firing
fungal biology reviews 28 (2014) 70e76 journal homepage: www.elsevier.com/locate/fbr Review The mechanism of ascus firing e Merging biophysical and mycological viewpoints Frances TRAILa,*, Agnese SEMINARAb aDepartment of Plant Biology, Department of Plant, Soil and Microbial Sciences, Michigan State University, East Lansing, MI 48824, USA bCNRS, Laboratoire de physique de la matiere condensee, Parc Valrose, 06108, Nice, France article info abstract Article history: The actively discharging ascus is the unique spore-bearing cell that is responsible to Received 4 November 2012 dispatch spores into the atmosphere. From a physical perspective, this type of ascus is a Received in revised form sophisticated pressure gun that reliably discharges the spores at an extremely high veloc- 19 March 2014 ity, without breaking apart. We identify four essential steps in discharge of spores whose Accepted 17 July 2014 order and timing may vary across species. First, asci that fire are mature, so a cue must be present that prevents discharge of immature spores and signals maturity. Second, pres- Keywords: sure within the ascus serves to propel the spores forward; therefore a mechanism should Apothecia be present to pressurize the ascus. Third, in ostiolate fruiting bodies (e.g. perithecia), the Ascospore ascus extends through an opening to fire spores into the air. The extension process is a Locule relatively unique aspect of the ascus and must be structurally facilitated. Fourth, the ascus Paraphyses must open at its tip for spore release in a controlled rupture. Here we discuss each of these Perithecia aspects in the context of understanding the process of ascus and fruiting body function. -
Ascospore Morphology and Ultrastructure of Species Assigned to the Genus Lipornyces Lodder Et Kreger-Van Rij M
INTERNATIONALJOURNAL OF SYSTEMATICBACTERIOLOGY, Jan, 1984, p. 80-86 Vol. 34, No. 1 0020-7713/84/010080-07$02 .OO/O Copyright 0 1984, International Union of Microbiological Societies Ascospore Morphology and Ultrastructure of Species Assigned to the Genus Lipornyces Lodder et Kreger-van Rij M. T. SMITH* AND W. H. BATENBURG-VAN DER VEGTE Centraalbureau voor Schimmelcultures, Yeast Division, and Laboratory of Microbiology, Dert University of Technology, 2628 BC Delft, The Netherlands Ascospores of Lipomyces species were examined by transmission electron microscopy. The following four types of ascospore morphology were found in replicas: (i) ascospores with longitudinal ridges; (ii) ascospores with irregular folds; (iii) ascospores with slightly undulating surfaces; and (iv) ascospores with smooth surfaces. In contrast, on the basis of ultrastructure of thin sections, only three types of ascospores were identified. In 1974 Nieuwdorp et al. (4) studied the genus Lipomyces 3% glutaraldehyde in 0.1 M cacodylate buffer (pH 7.0). A Lodder et Kreger-van Rij and recognized the following three solution containing 3.5 g of potassium bichromate in 100 ml types of ascospores: (i) smooth ascospores in Lipomyces of 25% H2S04 was used to dissolve the copper grid and kononenkoae Nieuwdorp et al. and Lipomyces lipofer Lod- spores within 2 h. The specimens were shadowed with der et Kreger-van Rij; (ii) warty ascospores in Lipomyces platinum at an angle of 30” and examined with a Philips starkeyi Lodder et Kreger-van Rij; and (iii) ridged asco- model EM 201 electron microscope at 60 kV. spores in Lipomyces tetrasporus (Krassilnikov et al.) For ultrathin sections the following two methods of fixa- Nieuwdorp et al. -
Improvement of Fruiting Body Production in Cordyceps Militaris by Molecular Assessment
Arch Microbiol (2013) 195:579–585 DOI 10.1007/s00203-013-0904-8 SHORT COMMUNICATION Improvement of fruiting body production in Cordyceps militaris by molecular assessment Guozhen Zhang · Yue Liang Received: 23 January 2013 / Revised: 16 May 2013 / Accepted: 19 May 2013 / Published online: 12 June 2013 © Springer-Verlag Berlin Heidelberg 2013 Abstract Cordyceps militaris is a heterothallic ascomy- Introduction cetous fungus that has been cultivated as a medicinal mush- room. This study was conducted to improve fruiting body Mushrooms have recently drawn considerable attention as production by PCR assessment. Based on single-ascospore attractive and abundant sources of useful natural products isolates selected from wild and cultivated populations, the (Smith et al. 2002). Among others, Cordyceps species have conserved sequences of α-BOX in MAT1-1 and HMG-BOX traditionally been used not only as a folk tonic food and in MAT1-2 were used as markers for the detection of mat- nutraceutical, but also as a restorative drug for longevity ing types by PCR. PCR results indicated that the ratio of and vitality (Paterson and Russell 2008). Mushrooms of mating types is consistent with a theoretical ratio of 1:1 this genus have also been used for dietary fiber, health sup- (MAT1-1:MAT1-2) in wild (66:70) and cultivated (71:60) plements, and maintenance as well as for prevention and populations. Cross-mating between the opposite mating treatment for human diseases for centuries in East Asian types produced over fivefold more well-developed fruiting countries (Paterson and Russell 2008). bodies than self- or cross-mating between strains within the Cordyceps militaris belongs to Cordycipitaceae, Hypo- same mating type. -
December 2013
Supplement to Mycologia Vol. 64(6) December 2013 Newsletter of the Mycological Society of America — In This Issue — The Global Fungal Red List Initiative Articles The Global Fungal Red List Initiative Fungal conservation is not yet commonly discussed, consid- IUCN Resolution: Increasing the Attention ered, or acted upon by the mycological community. Not coinci- Given to the Conservation of Fungi Third International Congress on Fungal dently, fungi are rarely included in broader conservation discus- Conservation sions, policy decisions, or land management plans. However, Micromycology from a Smartphone species of fungi are not immune to the threats that put species of and a Hand Lens Emerging Frontiers in Tropical Science Workshop animals and plants at risk. Fungal species are threated by habitat MSA Business loss, loss of symbiotic hosts, pollution, over exploitation, and cli- Executive Vice President’s Report mate change, but the conservation status of the vast majority of MSA Directory 2013-2014 fungal species has not been assessed. Editor’s Note: Julia Kerrigan New Inoculum Editor! Over 21,000 animal, fungal, and plant species are globally MSA Awards 2013 red-listed (IUCN 2013). However, only one macrofungus and two MSA Student Section lichenized fungi are included in that list. This is despite the fact Happy New Year Poster from the MSA Student Section that approximately 5000 macrofungi, 1000 lichenized fungi, and Mycological News some species of other fungal groups are included in individual Call for MSA Council Nominations country red-lists. In the USA, 4268 species (mostly lichenized MSA Awards 2014 Announcement fungi) are included in the NatureServe database. -
Dispersal of Fungal Spores
DISPERSAL OF FUNGAL SPORES D.W.Gover Dispersal for fungi, as with plants, is an important reproductive function, in order to maintain the species, extend the existing habitat range and also to spread genetic variability, when it occurs, throughout the population. Spore dispersal may be achieved by the physical mechanisms of gravity, wind, water and animals. Also, many fungi have active mechanisms to effect release of their spores, which are then dispersed by these external agencies. GENERAL FEATURES OF SPORES a. SPORE STRUCTURE AND GERMINATION A spore may be defined as a reproductive unit which lacks a preformed embryo and is produced by fungi, bacteria and cryptogamic i.e. non-flowering, plants. While the diversity of fungal spores makes it impossible to generalise, many fungal spores differ from that of vegetative cells in two major respects. The wall is often thick and is impregnated with melanin, lipids, etc. and there is little differentiation of the cytoplasm, the endoplasmic reticulum and mitochondria being poorly developed. Spore germination involves a number of metabolic and ultrastructural changes. Initially, the spore swells due to absorption of water, food reserves (lipids) are converted to metabolically active compounds, and there is a rapid increase in respiration. The spore continues to swell as a direct result of its metabolic activities, and a new wall layer is usually formed inside the existing spore wall. Ultimately, one or more germ tubes emerge by rupture of the old spore wall, and the wall of the germ tube arises as a direct extension of the newly formed wall of the spore.