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Some ABCA3 Mutations Elevate ER Stress and Initiate Apoptosis of Lung Epithelial Cells
Some ABCA3 mutations elevate ER stress and initiate apoptosis of lung epithelial cells Nina Weichert Aus der Kinderklinik und Kinderpoliklinik im Dr. von Haunerschen Kinderspital der Ludwig-Maximilians-Universität München Direktor: Prof. Dr. med. Dr. sci. nat. Christoph Klein Some ABCA3 mutations elevate ER stress and initiate apoptosis of lung epithelial cells Dissertation zum Erwerb des Doktorgrades der Humanmedizin an der Medizinischen Fakultät der Ludwig-Maximilians-Universität zu München Vorgelegt von Nina Weichert aus Heidelberg 2011 Mit Genehmigung der Medizinischen Fakultät der Universität München 1. Berichterstatter: Prof. Dr. Matthias Griese 2. Berichterstatter: Prof. Dr. Dennis Nowak Mitberichterstatter: Priv. Doz. Dr. Angela Abicht Prof. Dr. Michael Schleicher Mitbetreuung durch den promovierten Mitarbeiter: Dr. Suncana Kern Dekan: Herr Prof. Dr. med. Dr. h. c. Maximilian Reiser, FACR, FRCR Tag der mündlichen Prüfung: 24.11.2011 Table of Contents 1.Abstract ................................................................................................................... 1 2.Zusammenfassung................................................................................................. 2 3.Intoduction .............................................................................................................. 3 3.1 Pediatric interstitial lung disease ............................................................................... 3 3.1.1 Epidemiology of pILD.............................................................................................. -
Commonly Used Lipidcentric ICD-10 (ICD-9) Codes
Commonly Used Lipidcentric ICD-10 (ICD-9) Codes *This is not an all inclusive list of ICD-10 codes R.LaForge 11/2015 E78.0 (272.0) Pure hypercholesterolemia E78.3 (272.3) Hyperchylomicronemia (Group A) (Group D) Familial hypercholesterolemia Grütz syndrome Fredrickson Type IIa Chylomicronemia (fasting) (with hyperlipoproteinemia hyperprebetalipoproteinemia) Hyperbetalipoproteinemia Fredrickson type I or V Hyperlipidemia, Group A hyperlipoproteinemia Low-density-lipoid-type [LDL] Lipemia hyperlipoproteinemia Mixed hyperglyceridemia E78.4 (272.4) Other hyperlipidemia E78.1 (272.1) Pure hyperglyceridemia Type 1 Diabetes Mellitus (DM) with (Group B) hyperlipidemia Elevated fasting triglycerides Type 1 DM w diabetic hyperlipidemia Endogenous hyperglyceridemia Familial hyperalphalipoproteinemia Fredrickson Type IV Hyperalphalipoproteinemia, familial hyperlipoproteinemia Hyperlipidemia due to type 1 DM Hyperlipidemia, Group B Hyperprebetalipoproteinemia Hypertriglyceridemia, essential E78.5 (272.5) Hyperlipidemia, unspecified Very-low-density-lipoid-type [VLDL] Complex dyslipidemia hyperlipoproteinemia Elevated fasting lipid profile Elevated lipid profile fasting Hyperlipidemia E78.2 (272.2) Mixed hyperlipidemia (Group C) Hyperlipidemia (high blood fats) Broad- or floating-betalipoproteinemia Hyperlipidemia due to steroid Combined hyperlipidemia NOS Hyperlipidemia due to type 2 diabetes Elevated cholesterol with elevated mellitus triglycerides NEC Fredrickson Type IIb or III hyperlipoproteinemia with E78.6 (272.6) -
Pathology of Tangier Disease
J Clin Pathol: first published as 10.1136/jcp.24.7.609 on 1 October 1971. Downloaded from J. clin. Path., 1971, 24, 609-616 Pathology of Tangier disease PATRICIA M. BALE, P. CLIFTON-BLIGH, B. N. P. BENJAMIN, AND H. M. WHYTE From the Institute of Pathology, Royal Alexandra Hospital for Children, Camperdown, Sydney, and the Department of Clinical Science, Australian National University, Canberra sYNoPsis Two cases of Tangier disease are described in children from families unrelated to each other. Necropsy in one case, the first to be reported in this condition, showed large collections of cholesterol-laden macrophages in tonsils, thymus, lymph nodes, and colon, and moderate numbers in pyelonephritic scars and ureter. As the storage cells may be scanty in marrow, jejunum, and liver, the rectum is suggested as the site of choice for biopsy. The diagnosis was confirmed by demonstrating the absence of a-lipoproteins from the plasma of the living child, and by finding low plasma levels in both parents of both cases. The disease can be distinguished from other lipidoses by differences in the predominant sites of storage, staining re- actions, and serum lipid studies. Tangier disease is a familial storage disorder in necropsied case. The 12 subjects (Table I) have come which esterified cholesterol accumulates in macro- from eight families, the first of which lived on copyright. phages, while plasma cholesterol is low, and plasma Tangier Island, Chesapeake Bay, Virginia. Males high density lipoprotein is virtually absent. and females have been equally represented, and Ten cases have been reported, and we have studied affected relatives have always oeen siblings, never two additional patients, one of whom is the first parent and child, suggesting an autosomal recessive Received for publication 27 November 1970. -
Mutation of the ABCA1 Gene in Hypoalphalipoproteinemia with Corneal Lipidosis
4600/366J Hum Genet (2002) 47:366–369 N. Matsuda et al.: © Jpn EGF Soc receptor Hum Genet and osteoblastic and Springer-Verlag differentiation 2002 SHORT COMMUNICATION Jun Ishii · Makoto Nagano · Takeshi Kujiraoka Mitsuaki Ishihara · Tohru Egashira · Daisuke Takada Masahiro Tsuji · Hiroaki Hattori · Mitsuru Emi Clinical variant of Tangier disease in Japan: mutation of the ABCA1 gene in hypoalphalipoproteinemia with corneal lipidosis Received: March 1, 2002 / Accepted: March 15, 2002 Abstract Despite progress in molecular characterization, hypoalphalipoproteinemia syndromes have hampered their specific diagnoses of disorders belonging to a group of in- classification into distinct disease entities. From a clinical herited hypoalphalipoproteinemias, i.e., apolipoprotein AI standpoint, the term “inherited hypoalphalipoproteinemia” deficiency, lecithin-cholesterol acyltransferase deficiency, can apply to apolipoprotein AI (apoAI) deficiency, lecithin- Tangier disease (TD), and familial high-density lipoprotein cholesterol acyltransferase (LCAT) deficiency, Tangier (HDL) deficiency, remain difficult on a purely clinical basis. disease (TD), or so-called familial high-density lipoprotein Several TD patients were recently found to be homozygous (HDL) deficiency (Assmann et al. 1995). Despite some for mutations in the ABCA1 gene. We have documented progress in molecular characterization, specific diagnoses of here a clinical variant of TD in a Japanese patient who these disorders remain difficult because of their phenotypic manifested corneal lipidosis and premature coronary artery spectra overlap and because the penetrance of some symp- disease as well as an almost complete absence of HDL- toms is age related. cholesterol, by identifying a novel homozygous ABCA1 Mutation in ABCA1, a gene mapping to 9q31 and encod- mutation (R1680W). We propose that patients with ap- ing an ATP-binding cassette transporter, confers suscepti- parently isolated HDL deficiency who are found to carry bility to TD, a recessive disease (Bodzioch et al. -
Transient Dyslipidemia Mimicking the Plasma Lipid Profile of Tangier Disease in a Diabetic Patient with Gram Negative Sepsis
Available online at www.annclinlabsci.org 150 Annals of Clinical & Laboratory Science, vol. 41, no. 2, 2011 Transient Dyslipidemia Mimicking the Plasma Lipid Profile of Tangier Disease in a Diabetic Patient with Gram Negative Sepsis Carlos Palacio, M.D.,1 Irene Alexandraki, M.D.,1 Roger L. Bertholf, Ph.D.,2 and Arshag D. Mooradian, M.D.1 Department of Medicine1 and the Department of Pathology2, University of Florida - College of Medicine, Jacksonville, FL Abstract. Tangier disease is a rare genetic disorder of lipid metabolism characterized by low concentrations of plasma high density lipoprotein (HDL) and low density lipoprotein (LDL) cholesterol with normal or elevated levels of triglycerides. In this case report we describe a patient with diabetes who experienced an episode of urosepsis with a plasma lipid profile resembling Tangier disease. Experimental evidence in the literature suggests that similar lipid changes may occur due to cytokines released during sepsis. Clinicians should be aware of these changes to avoid misdiagnosis of lipid disorders. Introduction Tangier disease during an episode of urosepsis. Within two weeks post recovery the dyslilpidemia Tangier disease (familial alpha lipoprotein resolved and the plasma lipid profile returned to deficiency) is a rare genetic disorder of lipid baseline values. metabolism characterized principally by a severe deficiency of high density lipoprotein (HDL), Clinical History accompanied by low plasma levels of low density lipoprotein (LDL) cholesterol, normal or elevated The patient was a 58-year-old woman presenting plasma levels of triglycerides, and accumulation of with the chief complaint of generalized abdominal cholesteryl ester in reticuloendothelial tissue [1, 2]. pain with nausea, vomiting, and fever for four Phenotypically, patients with Tangier disease may days. -
Download CGT Exome V2.0
CGT Exome version 2. -
Genetic Dyslipidemia and Cardiovascular Diseases
Sultan Qaboos University Genetic Dyslipidemia and Cardiovascular Diseases Fahad AL Zadjali, PhD [email protected] We care 1 2/14/18 DISCLOSURE OF CONFLICT No financial relationships with commercial interests 2 2/14/18 Lipoprotein metabolism Genetic diseases: - LDL-cholesterol - HDL-cholesterol - Triglycerides - Combines WHO / Fredrickson classification of primary hyperlipidaemias Familial hypercholestrolemia Genetics defects in ApoB: synthesis and truncated apoB Familial hypobetalipoproteinemia (FHBL) VLDL TG VLDL B MTP & CE lipid B B TG CE ApoB synthesis B TG CE LDL Familial hypobetalipoproteinemia LDL-C very low in homozygotes and fat malabsoprion retinitis pigmentosa Acanthocytosis Heterozygotes have decreased levels of LDL-C and apoB usually asymptomatic and have a decreased risk of CVD Abetalipoproteinemia (ABL): deficiency of MTP - Recessive disorder - Deficiency of all apoB containing lipoproteins (chylomicrons, VLDL and LDL Fat malabsorption Acanthocytosis Retinitis pigmentosa Familial Combined Hypolipidemia - Mutation in Angiopoietin-like protein 3 (ANGPTL3) - increased activity of lipoprotein lipase - Increase clearance of VLDL LDL and HDL - Low TG and low T.Cholesteorl - No evidence of atherosclerosis Defects in HDL cholesterol levels Complete deficiency of HDL: APOAI LCAT ABCA1 Hyperalphalipoproteinemia HL CETP Lecithin:Cholesterol Acyl Transferase Deficiency (LCAT) - Convert cholesterol into cholesterol ester in HDL - deficiency results in accumulation of free cholesterol: corneal opacities Anemia Renal failure Atherosclerosis -
ABCA1) in Human Disease
International Journal of Molecular Sciences Review The Role of the ATP-Binding Cassette A1 (ABCA1) in Human Disease Leonor Jacobo-Albavera 1,† , Mayra Domínguez-Pérez 1,† , Diana Jhoseline Medina-Leyte 1,2 , Antonia González-Garrido 1 and Teresa Villarreal-Molina 1,* 1 Laboratorio de Genómica de Enfermedades Cardiovasculares, Dirección de Investigación, Instituto Nacional de Medicina Genómica (INMEGEN), Mexico City CP14610, Mexico; [email protected] (L.J.-A.); [email protected] (M.D.-P.); [email protected] (D.J.M.-L.); [email protected] (A.G.-G.) 2 Posgrado en Ciencias Biológicas, Universidad Nacional Autónoma de México (UNAM), Coyoacán, Mexico City CP04510, Mexico * Correspondence: [email protected] † These authors contributed equally to this work. Abstract: Cholesterol homeostasis is essential in normal physiology of all cells. One of several proteins involved in cholesterol homeostasis is the ATP-binding cassette transporter A1 (ABCA1), a transmembrane protein widely expressed in many tissues. One of its main functions is the efflux of intracellular free cholesterol and phospholipids across the plasma membrane to combine with apolipoproteins, mainly apolipoprotein A-I (Apo A-I), forming nascent high-density lipoprotein- cholesterol (HDL-C) particles, the first step of reverse cholesterol transport (RCT). In addition, ABCA1 regulates cholesterol and phospholipid content in the plasma membrane affecting lipid rafts, microparticle (MP) formation and cell signaling. Thus, it is not surprising that impaired ABCA1 function and altered cholesterol homeostasis may affect many different organs and is involved in the Citation: Jacobo-Albavera, L.; pathophysiology of a broad array of diseases. This review describes evidence obtained from animal Domínguez-Pérez, M.; Medina-Leyte, models, human studies and genetic variation explaining how ABCA1 is involved in dyslipidemia, D.J.; González-Garrido, A.; Villarreal- coronary heart disease (CHD), type 2 diabetes (T2D), thrombosis, neurological disorders, age-related Molina, T. -
Dyslipidemia Infosheet 6-10-19
Genetic Testing for Dyslipidemias Clinical Features: Dyslipidemias are a clinically and genetically heterogenous group of disorders associated with abnormal levels of lipids and lipoproteins, including increased or decreased levels of LDL or HDL cholesterol or increased levels of triglycerides [1]. Dyslipidemias can have a monogenic cause, or may be associated with other conditions such as diabetes and thyroid disease, or lifestyle factors. The most common subset of monogenic dyslipidemia is familial hypercholesterolemia (FH), which has an estimated prevalence of 1 in 200 in the Caucasian population [2]. Our Dyslipidemia Panes includes analysis of all 23 genes listed below. Dyslipidemia Panel Genes ABCA1 APOA1 CETP LDLR LMF1 SAR1B ABCG5 APOA5 GPD1 LDLRAP1 LPL SCARB1 ABCG8 APOB GPIHBP1 LIPA MTTP STAP1 ANGPTL3 APOC2 LCAT LIPC PCSK9 Gene OMIM# Associated disorders Dyslipidemia Inheritance Reference phenotype s ABCA1 60004 Tangier disease; High Low HDL-C Recessive; [3, 4] 6 density lipoprotein (HDL) Dominant deficiency ABCG5 60545 Sitosterolemia Hypercholesterolemia Recessive [5] 9 , hypersitosterolemia ABCG8 60546 Sitosterolemia Hypercholesterolemia Recessive [5] 0 , hypersitosterolemia ANGPTL 60501 Familial Low LDL-C Recessive [6] 3 9 hypobetalipoproteinemia- 2 APOA1 10768 Apolipoprotein A-I Low HDL-C Recessive; [7, 8] 0 deficiency; HDL Dominant deficiency APOA5 60636 Hyperchylomicronemia; Hypertriglyceridemia Dominant/Recessive [9, 10] 8 Hypertriglyceridemia ; Dominant APOB 10773 Familial High LDL-C; Low Co-dominant [1, 11] 0 hypercholesterolemia; -
Studies on the Protein Defect in Tangier Disease
Studies on the Protein Defect in Tangier Disease ISOLATION AND CHARACTERIZATION OF AN ABNORMAL HIGH DENSITY LIPOPROTEIN SAMUEL E. Lux, ROBERT I. LEVY, ANTONIO M. Gorro, and DONALD S. FREDRICKSON From the Molecular Disease Branch, National Heart and Lung Institute, Bethesda, Maryland 20014 A B S T R A CT High density lipoproteins (d 1.063-1.210 centration of apoLp-Gln-II about 17-fold. The decrease g/ml) were isolated from the plasma of normal indi- in these apoproteins was not due to preferential segrega- viduals (HDL) and seven homozygous patients with tion with the lipoprotein fractions of d < 1.063 g/ml or Tangier disease (HDLT). In Tangier patients., the con- with the plasma proteins of d > 1.21 g/ml. Tangier centration of protein in the high density region (HDLT) apoLp-Gln-I and apoLp-Gln-II appeared to be immuno- was only 0.5-4.5% of normal. Immunochemical studies, chemically identical with their normal counterparts, and including mixing experiments conducted in vivo and in no differences between the two sets of apoproteins were vitro, indicated that HDLT was different from HDL. detected on polyacrylamide gel electrophoresis at pH HDLT was the only high density lipoprotein detectable 9.4 or 2.9. These results are most compatible with the in the plasma of Tangier homozygotes. In heterozygotes hypothesis that the hereditary defect in Tangier disease both HDL and HDLT were present. HDLT was not de- is a mutation in an allele-regulating synthesis of tected in the plasma of over 300 normal persons and apoLp-Gln-I. -
Whole Exome Sequencing Gene Package Metabolic Disorders, Version 5.1, 31-1-2020
Whole Exome Sequencing Gene package Metabolic disorders, version 5.1, 31-1-2020 Technical information DNA was enriched using Agilent SureSelect DNA + SureSelect OneSeq 300kb CNV Backbone + Human All Exon V7 capture and paired-end sequenced on the Illumina platform (outsourced). The aim is to obtain 10 Giga base pairs per exome with a mapped fraction of 0.99. The average coverage of the exome is ~50x. Duplicate and non-unique reads are excluded. Data are demultiplexed with bcl2fastq Conversion Software from Illumina. Reads are mapped to the genome using the BWA-MEM algorithm (reference: http://bio-bwa.sourceforge.net/). Variant detection is performed by the Genome Analysis Toolkit HaplotypeCaller (reference: http://www.broadinstitute.org/gatk/). The detected variants are filtered and annotated with Cartagenia software and classified with Alamut Visual. It is not excluded that pathogenic mutations are being missed using this technology. At this moment, there is not enough information about the sensitivity of this technique with respect to the detection of deletions and duplications of more than 5 nucleotides and of somatic mosaic mutations (all types of sequence changes). HGNC approved Phenotype description including OMIM phenotype ID(s) OMIM median depth % covered % covered % covered gene symbol gene ID >10x >20x >30x AASS Hyperlysinemia, 238700 605113 63 100 97 90 Saccharopinuria, 268700 ABAT GABA-transaminase deficiency, 613163 137150 100 100 100 96 ABCA1 HDL deficiency, familial, 1, 604091 600046 92 100 100 97 Tangier disease, 205400 -
Genomic Organization and Identification of the Genetic Defect in the Original Tangier Disease Kindred
Human ATP-binding cassette transporter 1 (ABC1): Genomic organization and identification of the genetic defect in the original Tangier disease kindred Alan T. Remaley*†, Stephan Rust†‡, Marie Rosier†§, Cathy Knapper*, Laurent Naudin§, Cyril Broccardo¶, Katherine M. Peterson*, Christine Koch*, Isabelle Arnould§, Catherine Prades§, Nicholas Duverger§, Harald Funke‡, Gerd Assman‡, Maria Dinger*, Michael Deanʈ, Giovanna Chimini¶, Silvia Santamarina-Fojo*, Donald S. Fredrickson*, Patrice Denefle§, and H. Bryan Brewer, Jr.*,** *National Institutes of Health, National Heart, Lung and Blood Institute, Bethesda, MD 20892; §Core Genomics and Cardiovascular Department, Rhone-Poulenc Rorer, 91006 Every, France; ‡Institut fur Arterioskleroseforschung an der Westfalischen Wilhelms-Universitat Munster, Domagkstrabe, D-48149 Munster, Germany; ¶Centre d’Immunologie de Marseille-Luminy, 13288 Marseille, France; and ʈNational Institutes of Health, National Cancer Institute, Frederick, MD 21702 Contributed by Donald S. Frederickson, August 4, 1999 Tangier disease is characterized by low serum high density lipopro- apoE. Apolipoprotein-mediated efflux is an energy-dependent teins and a biochemical defect in the cellular efflux of lipids to high process that requires the direct interaction of the apolipoprotein density lipoproteins. ABC1, a member of the ATP-binding cassette with the cell surface, the lipidation of the apolipoprotein, and the family, recently has been identified as the defective gene in subsequent dissociation of the lipid-apolipoprotein complex Tangier disease. We report here the organization of the human from the cell (4, 8, 10, 15). Cholesterol loading of cells induces ABC1 gene and the identification of a mutation in the ABC1 gene the apolipoprotein-mediated cholesterol efflux pathway (4, 13, from the original Tangier disease kindred.