Temperature Impact on Reproduction and Development of Congener Copepod Populations
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Species of the Genera Temora and Tortanus from Indonesian Coastal Waters
Berk. Penel. Hayati: 14 (125–135), 2009 SPECIES OF THE GENERA TEMORA AND TORTANUS FROM INDONESIAN COASTAL WATERS Mulyadi Division of Zoology, Research Center for Biology, Indonesian Institute of Sciences Jl. Raya Bogor Km. 46 Cibinong 16911, Indonesia E-mail: [email protected] ABSTRACT During taxonomic studies on the pelagic copepods of Indonesian waters, three species of Temora, T. discaudata Giesbrecht, 1882, T. discaudata n. var. and T. turbinata (Dana, 1849), and three species of Tortanus, T. (Tortanus) barbatus, T. (Tortanus) forcipatus and T. (Tortanus) gracilis were described and figured on specimens collected from 8 sites along Indonesian coastal waters. Descriptions, measurements and figures are given for those species, along with a review of their distribution over the world oceans, and with taxonomic remarks, ecological notes, and restricted synonymies. Key words: taxonomy, Temora, Tortanus, Indonesian waters INTRODUCTION MATERIALS AND METHODS Family Temoridae Giesbrecht, 1893 comprises of The present plankton samples were obtained from 8 35 species from four genera, Epischura Forbes, 1882; sites during 1994–2007 (Figure 1). Sampling was done Eurytemora Giesbrecht, 1881; Heterocope Sars, 1863; and by surface and vertical hauls (10 m and 20 m depth to the Temora Baird, 1850. The genus Temora presently comprises surface) with plankton net (0.33 mm mesh size, 0.45 m of five species (Boxshall & Halsey, 2004). Among them two mouth diameter). The samples were fixed and preserved species, T. discaudata Giesbrecht, 1882 and T. turbinata in 5% buffered formaldehyde/sea water solution. As far (Dana, 1849) have been reported from Indonesian waters as possible, the specimens were identified to species level. -
Molecular Species Delimitation and Biogeography of Canadian Marine Planktonic Crustaceans
Molecular Species Delimitation and Biogeography of Canadian Marine Planktonic Crustaceans by Robert George Young A Thesis presented to The University of Guelph In partial fulfilment of requirements for the degree of Doctor of Philosophy in Integrative Biology Guelph, Ontario, Canada © Robert George Young, March, 2016 ABSTRACT MOLECULAR SPECIES DELIMITATION AND BIOGEOGRAPHY OF CANADIAN MARINE PLANKTONIC CRUSTACEANS Robert George Young Advisors: University of Guelph, 2016 Dr. Sarah Adamowicz Dr. Cathryn Abbott Zooplankton are a major component of the marine environment in both diversity and biomass and are a crucial source of nutrients for organisms at higher trophic levels. Unfortunately, marine zooplankton biodiversity is not well known because of difficult morphological identifications and lack of taxonomic experts for many groups. In addition, the large taxonomic diversity present in plankton and low sampling coverage pose challenges in obtaining a better understanding of true zooplankton diversity. Molecular identification tools, like DNA barcoding, have been successfully used to identify marine planktonic specimens to a species. However, the behaviour of methods for specimen identification and species delimitation remain untested for taxonomically diverse and widely-distributed marine zooplanktonic groups. Using Canadian marine planktonic crustacean collections, I generated a multi-gene data set including COI-5P and 18S-V4 molecular markers of morphologically-identified Copepoda and Thecostraca (Multicrustacea: Hexanauplia) species. I used this data set to assess generalities in the genetic divergence patterns and to determine if a barcode gap exists separating interspecific and intraspecific molecular divergences, which can reliably delimit specimens into species. I then used this information to evaluate the North Pacific, Arctic, and North Atlantic biogeography of marine Calanoida (Hexanauplia: Copepoda) plankton. -
Temora Baird, 1850
Temora Baird, 1850 Iole Di Capua Leaflet No. 195 I April 2021 ICES IDENTIFICATION LEAFLETS FOR PLANKTON FICHES D’IDENTIFICATION DU ZOOPLANCTON ICES INTERNATIONAL COUNCIL FOR THE EXPLORATION OF THE SEA CIEM CONSEIL INTERNATIONAL POUR L’EXPLORATION DE LA MER International Council for the Exploration of the Sea Conseil International pour l’Exploration de la Mer H. C. Andersens Boulevard 44–46 DK-1553 Copenhagen V Denmark Telephone (+45) 33 38 67 00 Telefax (+45) 33 93 42 15 www.ices.dk [email protected] Series editor: Antonina dos Santos and Lidia Yebra Prepared under the auspices of the ICES Working Group on Zooplankton Ecology (WGZE) This leaflet has undergone a formal external peer-review process Recommended format for purpose of citation: Di Capua, I. 2021. Temora Baird, 1850. ICES Identification Leaflets for Plankton No. 195. 17 pp. http://doi.org/10.17895/ices.pub.7719 ISBN number: 978-87-7482-580-7 ISSN number: 2707-675X Cover Image: Inês M. Dias and Lígia F. de Sousa for ICES ID Plankton Leaflets This document has been produced under the auspices of an ICES Expert Group. The contents therein do not necessarily represent the view of the Council. © 2021 International Council for the Exploration of the Sea. This work is licensed under the Creative Commons Attribution 4.0 International License (CC BY 4.0). For citation of datasets or conditions for use of data to be included in other databases, please refer to ICES data policy. i | ICES Identification Leaflets for Plankton 195 Contents 1 Summary ......................................................................................................................... 1 2 Introduction .................................................................................................................... 1 3 Distribution .................................................................................................................... -
The “Metacopepod” Project: Designing an Integrated DNA Metabarcoding and Image Analysis Approach to Study and Monitor Biodiversity of Zooplanktonic Copepods
The “MetaCopepod” project: Designing an integrated DNA metabarcoding and image analysis approach to study and monitor biodiversity of zooplanktonic copepods. PanagiotisPanagiotis KasapidisKasapidis HellenicHellenic CentreCentre forfor MarineMarine ResearchResearch (HCMR),(HCMR), InstituteInstitute ofof MarineMarine Biology,Biology, BiotechnologyBiotechnology andand AquacultureAquaculture P.O.Box 2214, 71003 Heraklion Crete, Greece 1 The “MetaCopepod” project Aim: to develop a novel methodology, based on the combination of DNA metabarcoding and image analysis, to assess and monitor the diversity of marine zooplanktonic copepods (and cladocera), in the Mediterranean and the Black Sea, in a high-throughput, cost- effective, accurate and quantitative way. Coordinator: Dr. Panagiotis Kasapidis, Hellenic Centre for Marine Research (HCMR), GREECE Study area: Mediterranean and the Black Sea Duration: Feb. 2014 – Oct. 2015 Budget: 180,000 euros Funding: European Social Fund (ESF) and National Funds through the National Strategic Reference Framework (NSRF) 2007-2013, Operational Programme "Education and Life-Long Learning", Action "ARISTEIA II", Greek Ministry of Education and Religious Affairs, General Secretary of Research and Technology. 2 Studying zooplankton diversity: limitations of traditional approaches ● Quite laborious (sorting, identification under stereoscope) → bottleneck in sample processing. ● Requires local taxonomic expertise ● Difficult to identify immature stages ● Misidentifications ● Cryptic species 3 Image analysis + Pros -
Rare Sexual Anomalies in Temora Stylifera (Dana, 1849) (Copepoda: Calanoida)
See discussions, stats, and author profiles for this publication at: https://www.researchgate.net/publication/26737274 Rare sexual anomalies in Temora stylifera (Dana, 1849) (Copepoda: Calanoida) ARTICLE in BRAZILIAN JOURNAL OF BIOLOGY · JUNE 2009 Impact Factor: 0.78 · DOI: 10.1590/S1519-69842009000200031 · Source: PubMed CITATIONS READS 3 20 4 AUTHORS, INCLUDING: José Eduardo Martinelli-Filho Federal University of Pará 8 PUBLICATIONS 28 CITATIONS SEE PROFILE Rubens M Lopes University of São Paulo 76 PUBLICATIONS 699 CITATIONS SEE PROFILE Available from: José Eduardo Martinelli-Filho Retrieved on: 06 April 2016 ID Artigo: 098-08 envio: 18/05/2009 Diagramador: Alexandra cubomultimidia publicações e-mail: [email protected] Rare sexual anomalies in Temora stylifera (Dana, 1849) (Copepoda: Calanoida) Martinelli-Filho, JE.*, Melo-Júnior M., Cunha, DR. and Lopes, RM. Departamento de Oceanografia Biológica, Instituto Oceanográfico – IO, Universidade de São Paulo – USP, Praça do Oceanográfico, 191, Cidade Universitária, CEP 05508-120, São Paulo, SP, Brazil *e-mail: [email protected] Received September 5, 2008 – Accepted October 8, 2008 – Distributed May 30, 2009 (With 2 figures) Temora stylifera (Dana, 1849) is one of the most sexual characters such as A1 and fifth leg (P5) abundant species of calanoid copepods in neritic waters were typically male (Figure 2); and off Brazil (e.g. Neumann-Leitão et al., 1999). This species 2) Male bearing geniculation in both antennules: has a circumglobal distribution in tropical and subtropical the specimen was observed alive in microcosms waters (Bradford-Grieve et al., 1999), and has been stud- and displayed similar swimming behavior when ied in several aspects such as morphology, feeding ecol- compared to normal males. -
Oithona Similis (Copepoda: Cyclopoida) - a Cosmopolitan Species?
OITHONA SIMILIS (COPEPODA: CYCLOPOIDA) - A COSMOPOLITAN SPECIES? DISSERTATION Zur Erlangung des akademischen Grades eines Doktors der Naturwissenschaften -Dr. rer. nat- Am Fachbereich Biologie/Chemie der Universität Bremen BRITTA WEND-HECKMANN Februar 2013 1. Gutachter: PD. Dr. B. Niehoff 2. Gutachter: Prof. Dr. M. Boersma Für meinen Vater Table of contents Summary 3 Zusammenfassung 6 1. Introduction 9 1.1 Cosmopolitan and Cryptic Species 9 1.2 General introduction to the Copepoda 12 1.3 Introduction to the genus Oithona 15 1.4 Feeding and role of Oithona spp in the food web 15 1.5 Geographic and vertical distribution of Oithona similis 16 1.6. Morphology 19 1.6.1 General Morphology of the Subclass Copepoda 19 1.6.1.1 Explanations and Abbrevations 31 1.6.2 Order Cyclopoida 33 1.6.2.1 Family Oithonidae Dana 1853 35 1.6.2.2 Subfamily Oithoninae 36 1.6.2.3 Genus Oithona Baird 1843 37 1.7 DNA Barcoding 42 2. Aims of the thesis (Hypothesis) 44 3. Material and Methods 45 3.1. Investigation areas and sampling 45 3.1.1 The Arctic Ocean 46 3.1.2 The Southern Ocean 50 3.1.3 The North Sea 55 3.1.4 The Mediterranean Sea 59 3.1.5 Sampling 62 3.1.6 Preparation of the samples 62 3.2 Morphological studies and literature research 63 3.3 Genetic examinations 71 3.4 Sequencing 73 4 Results 74 4.1 Morphology of Oithona similis 74 4.1.1 Literature research 74 4.1.2 Personal observations 87 4.2. -
Checklist of Species Within the CCBNEP Study Area: References, Habitats, Distribution, and Abundance
Current Status and Historical Trends of the Estuarine Living Resources within the Corpus Christi Bay National Estuary Program Study Area Volume 4 of 4 Checklist of Species Within the CCBNEP Study Area: References, Habitats, Distribution, and Abundance Corpus Christi Bay National Estuary Program CCBNEP-06D • January 1996 This project has been funded in part by the United States Environmental Protection Agency under assistance agreement #CE-9963-01-2 to the Texas Natural Resource Conservation Commission. The contents of this document do not necessarily represent the views of the United States Environmental Protection Agency or the Texas Natural Resource Conservation Commission, nor do the contents of this document necessarily constitute the views or policy of the Corpus Christi Bay National Estuary Program Management Conference or its members. The information presented is intended to provide background information, including the professional opinion of the authors, for the Management Conference deliberations while drafting official policy in the Comprehensive Conservation and Management Plan (CCMP). The mention of trade names or commercial products does not in any way constitute an endorsement or recommendation for use. Volume 4 Checklist of Species within Corpus Christi Bay National Estuary Program Study Area: References, Habitats, Distribution, and Abundance John W. Tunnell, Jr. and Sandra A. Alvarado, Editors Center for Coastal Studies Texas A&M University - Corpus Christi 6300 Ocean Dr. Corpus Christi, Texas 78412 Current Status and Historical Trends of Estuarine Living Resources of the Corpus Christi Bay National Estuary Program Study Area January 1996 Policy Committee Commissioner John Baker Ms. Jane Saginaw Policy Committee Chair Policy Committee Vice-Chair Texas Natural Resource Regional Administrator, EPA Region 6 Conservation Commission Mr. -
BIO Review This Year
Bedford Institute of Oceanography The Bedford Institute of Oceanography (BIO) is the principal oceanographic institution in Canada; it is operated within the framework of several federal government de- partments; its staff, therefore, are public servants. BIO facilities (buildings, ships, computers, library, workshops, etc.) are operated by the Department of Fisheries and Oceans, through its Director-General, Ocean Science and Surveys (Atlantic). The principal laboratories and departments are: Department of Fisheries and Oceans (DFO) = Canadian Hydrographic Service (Atlantic Region) = Atlantic Oceanographic Laboratory = Marine Ecology Laboratory = Marine Fish Division Department of Energy, Mines and Resources (DEMR) = Atlantic Geoscience Centre Department of the Environment (DOE) = Seabird Research Unit BIO operates a fleet of three research vessels, together with several smaller craft. The two larger scientific ships, Hudson and Baffin, have global capability, extremely long endurance, and are Lloyds Ice Class I vessels able to work throughout the Canadian Arctic. BIO has four objectives: (1) To perform fundamental long-term research in all fields of the marine sciences (and to act as the principal Canadian repository of expertise). (2) To perform shorter-term applied research in response to present national needs, and to advise on the management of our marine environment including its fisheries and offshore hydrocarbon resources. (3) To perform necessary surveys and cartographic work to ensure a supply of suitable navigational charts for the region from George’s Bank to the Northwest Passage in the Canadian Arctic. (4) To respond with all relevant expertise and assistance to any major marine emergen- cy within the same region W.D. Bowen - Chief, Marine Fish Division, DFO M.J. -
A Comprehensive List of Chesapeake Bay Basin Species 1997
CBP/TRS 164/97 EPA 903R -97-004 A Comprehensive List of Chesapeake Bay Basin Species 1997 Chesapeake Bay Program February 1997 Chesapeake Bay Program The Chesapeake Bay Program is a unique regional partnership leading and directing restoration of Chesapeake Bay since 1983. The Chesapeake Bay Program partners include the states of Maryland, Pennsylvania, and Virginia; the District of Columbia; the Chesapeake Bay Commission, a tri-state legislative body; the U.S. Environmental Protection Agency (EPA), which represents the federal government; and participating citizen advisory groups. In the 1987 Chesapeake Bay Agreement, Chesapeake Bay Program partners set a goal to reduce the nutrients nitrogen and phosphorus entering the Bay by 40% by the year 2000. In the 1992 Amendments to the Chesapeake Bay Agreement, partners agreed to maintain the 40% goal beyond the year 2000 and to attack nutrients at their source--upstream in the tributaries. The Chesapeake Executive Council, made up of the governors of Maryland, Pennsylvania, and Virginia; the mayor of Washington, D.C.; the EPA administrator; and the chair of the Chesapeake Bay Commission, guided the restoration effort in 1993 with five directives addressing key areas of the restoration, including the tributaries, toxics, underwater bay grasses, fish passages, and agricultural nonpoint source pollution. In 1994, partners outlined initiatives for habitat restoration of aquatic, riparian, and upland environments; nutrient reduction in the Bay's tributaries; and toxics reductions, with an emphasis on pollution prevention. The 1995 Local Government Partnership Initiative engages the watershed’s 1,650 local governments in the Bay restoration effort. The Chesapeake Executive Council followed this in 1996 by adopting the Local Government Participation Action Plan and the Priorities for Action for Land, Growth and Stewardship in the Chesapeake Bay Region, which address land use management, growth and development, stream corridor protection, and infrastructure improvements. -
Diel Feeding Pattern and Diet of Rough Scad Trachurus Lathaminichols, 1920 (Carangidae) from the Southwestern Atlantic
Neotropical Ichthyology, 4(4):419-426, 2006 Copyright © 2006 Sociedade Brasileira de Ictiologia Diel feeding pattern and diet of rough scad Trachurus lathami Nichols, 1920 (Carangidae) from the Southwestern Atlantic Maria Raquel de Carvalho and Lucy Satiko Hashimoto Soares Diel changes in feeding activity and dietary composition of the rough scad Trachurus lathami were investigated through the analysis of stomach contents of 307 fish sampled over a 24-h period on the continental shelf off Ubatuba (23o 35´S 45oW). Stomach contents were analyzed by frequency of occurrence (O%), percent number (N%), percent mass (M%), and feeding index (FI% = O% * M%). Rough scad fed on mollusks (Gastropoda, Crepidula sp.), crustacean (Ostracoda, Copepoda, deca- pod larvae), chaetognat and teleostean fish. The main items were calanoid copepods (Eucalanus sp. and Centropages sp.). According to the analysis of the stomach fullness and prey digestion, T. lathami is both a diurnal and nocturnal feeder, showing some seasonal variation in feeding time. According to the Chronobiology concept, it was raised the hypothesis of circadian rhythm in feeding of this fish, probably synchronized by light/dark cycle. O estudo da dieta e do padrão diário e sazonal de atividade alimentar do chicharro Trachurus lathami foi realizado através de análises dos conteúdos estomacais de 307 peixes amostrados em estações fixas de coleta de 24 horas na plataforma continental ao largo de Ubatuba (23o 35´S 45oW). Os conteúdos estomacais foram analisados através da freqüência numérica (N%), massa porcentual (M%) e freqüência de ocorrência (O%) dos itens alimentares, e índice alimentar (O% * M%). A espécie caracterizou- se por ingerir principalmente copépodes calanóides (ex. -
Evelyn Zoppi De Roa in Memoriam
PUBLICACIÓN ESPECIAL Evelyn Zoppi de Roa In Memoriam Editado por Brightdoom Márquez-Rojas, Luís Troccoli-Ghinaglia & Eduardo Suárez-Morales Boletín del Instituto Oceanográfico de Venezuela Vol. 59. Nº 1 1 ISSN 0798-0639 Bahía de Mochima, Sucre, Venezuela BOLETÍN DEL INSTITUTO OCEANOGRÁFICO DE VENEZUELA UNIVERSIDAD DE ORIENTE CUMANÁ – VENEZUELA COMITÉ EDITORIAL El Instituto Oceanográfico de Venezuela (IOV) constituye el núcleo primigenio de la Universidad de ANTONIO BAEZA Clemson University, Oriente, creada por el Decreto de la Junta de Gobierno Nº Clemson, United State of America. 459 de fecha 21 de noviembre de 1958. Sus actividades comenzaron el 12 de octubre de 1959, en la ciudad de ARTURO ACERO P. Cumaná estado Sucre, Venezuela y han continuado Instituto de Ciencias Naturales, Universidad Nacional de Colombia, Bogotá, Colombia. ininterrumpidamente desde entonces. JOSÉ MANUEL VIÉITEZ EL BOLETÍN DEL INSTITUTO OCEANOGRÁFICO Universidad de Alcalá, DE VENEZUELA es una revista arbitrada que tiene Alcalá de Henares, España. como objeto fundamental difundir el conocimiento MAURO NIRCHIO científico sobre la oceanografía del Mar Caribe y el Universidad de Oriente y Universidad Técnica de Océano Atlántico Tropical. Machala, Machala, Ecuador. El Boletín fue editado por primera vez en el mes LUÍS TROCCOLI Universidad de Oriente y Universidad Estatal Santa de octubre del año 1961, siendo publicado con el nombre Elena, Santa Elena, Ecuador. de “Boletín del Instituto Oceanográfico”. A partir del volumen n° 8 publicado en el año 1970, la portada, el CARMEN TERESA RODRÍGUEZ Universidad de Carabobo, formato y las normas editoriales fueron modificadas. En el Carabobo, Venezuela. año 1980 es rebautizado con el nombre actual de “Boletín JULIÁN CASTAÑEDA del Instituto Oceanográfico de Venezuela”. -
Automatic Image Analysis of Plankton: Future Perspectives
MARINE ECOLOGY PROGRESS SERIES Vol. 312: 297–309, 2006 Published April 24 Mar Ecol Prog Ser OPENPEN ACCESSCCESS AS WE SEE IT* Automatic image analysis of plankton: future perspectives Phil F. Culverhouse1,**, Robert Williams2, Mark Benfield3, Per R. Flood4, Anne F. Sell5, Maria Grazia Mazzocchi6, Isabella Buttino6, Mike Sieracki7 1Centre for Interactive Intelligent Systems, University of Plymouth, Plymouth PL4 8AA, UK 2Plymouth Marine Laboratory, Prospect Place, The Hoe, Plymouth PL1 3DH, UK 3Louisiana State University, Coastal Fisheries Institute, Dept. Oceanology and Coastal Sciences, Baton Rouge, Lousiana 70803, USA 4Bathybiologica A/S, Gerhard Grans vei 58, 5081 Bergen, Norway 5Institute for Hydrobiology and Fisheries Science, University of Hamburg, Olbersweg 24, 22767 Hamburg, Germany 6Stazione Zoologica ‘A Dohrn’, Villa Comunale, 80121 Naples, Italy 7J. J. MacIsaac Facility for Individual Particle Analysis, Bigelow Laboratory for Ocean Sciences, 180 McKown Point, PO Box 475, West Boothbay Harbor, Maine 04575-0475, USA ABSTRACT: In the future, if marine science is to achieve any progress in addressing biological diver- sity of ocean plankton, then it needs to sponsor development of new technology. One requirement is the development of high-resolution sensors for imaging field-collected and in situ specimens in a non-invasive manner. The rapid automatic categorisation of species must be accompanied by the creation of very large distributed databases in the form of high-resolution 3D rotatable images of species, which could become the standard reference source for automatic identification. These 3D images will serve as classification standards for field applications, and (in adjusted optical quality) as training templates for image analysis systems based on statistical and other pattern-matching processes.