Crumpled Tarpaper Lichen (Collema Coniophilum)
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Insights Into the Ecology and Genetics of Lichens with a Cyanobacterial Photobiont
Insights into the Ecology and Genetics of Lichens with a Cyanobacterial Photobiont Katja Fedrowitz Faculty of Natural Resources and Agricultural Sciences Department of Ecology Uppsala Doctoral Thesis Swedish University of Agricultural Sciences Uppsala 2011 Acta Universitatis agriculturae Sueciae 2011:96 Cover: Lobaria pulmonaria, Nephroma bellum, and fallen bark in an old-growth forest in Finland with Populus tremula. Part of the tRNALeu (UAA) sequence in an alignment. (photos: K. Fedrowitz) ISSN 1652-6880 ISBN 978-91-576-7640-5 © 2011 Katja Fedrowitz, Uppsala Print: SLU Service/Repro, Uppsala 2011 Insights into the Ecology and Genetics of Lichens with a Cyanobacterial Photobiont Abstract Nature conservation requires an in-depth understanding of the ecological processes that influence species persistence in the different phases of a species life. In lichens, these phases comprise dispersal, establishment, and growth. This thesis aimed at increasing the knowledge on epiphytic cyanolichens by studying different aspects linked to these life stages, including species colonization extinction dynamics, survival and vitality of lichen transplants, and the genetic symbiont diversity in the genus Nephroma. Paper I reveals that local colonizations, stochastic, and deterministic extinctions occur in several epiphytic macrolichens. Species habitat-tracking metapopulation dynamics could partly be explained by habitat quality and size, spatial connectivity, and possibly facilitation by photobiont sharing. Simulations of species future persistence suggest stand-level extinction risk for some infrequent sexually dispersed species, especially when assuming low tree numbers and observed tree fall rates. Forestry practices influence the natural occurrence of species, and retention of trees at logging is one measure to maintain biodiversity. However, their long-term benefit for biodiversity is still discussed. -
Biological Soil Crust Community Types Differ in Key Ecological Functions
UC Riverside UC Riverside Previously Published Works Title Biological soil crust community types differ in key ecological functions Permalink https://escholarship.org/uc/item/2cs0f55w Authors Pietrasiak, Nicole David Lam Jeffrey R. Johansen et al. Publication Date 2013-10-01 DOI 10.1016/j.soilbio.2013.05.011 Peer reviewed eScholarship.org Powered by the California Digital Library University of California Soil Biology & Biochemistry 65 (2013) 168e171 Contents lists available at SciVerse ScienceDirect Soil Biology & Biochemistry journal homepage: www.elsevier.com/locate/soilbio Short communication Biological soil crust community types differ in key ecological functions Nicole Pietrasiak a,*, John U. Regus b, Jeffrey R. Johansen c,e, David Lam a, Joel L. Sachs b, Louis S. Santiago d a University of California, Riverside, Soil and Water Sciences Program, Department of Environmental Sciences, 2258 Geology Building, Riverside, CA 92521, USA b University of California, Riverside, Department of Biology, University of California, Riverside, CA 92521, USA c Biology Department, John Carroll University, 1 John Carroll Blvd., University Heights, OH 44118, USA d University of California, Riverside, Botany & Plant Sciences Department, 3113 Bachelor Hall, Riverside, CA 92521, USA e Department of Botany, Faculty of Science, University of South Bohemia, Branisovska 31, 370 05 Ceske Budejovice, Czech Republic article info abstract Article history: Soil stability, nitrogen and carbon fixation were assessed for eight biological soil crust community types Received 22 February 2013 within a Mojave Desert wilderness site. Cyanolichen crust outperformed all other crusts in multi- Received in revised form functionality whereas incipient crust had the poorest performance. A finely divided classification of 17 May 2013 biological soil crust communities improves estimation of ecosystem function and strengthens the Accepted 18 May 2013 accuracy of landscape-scale assessments. -
Lichens and Associated Fungi from Glacier Bay National Park, Alaska
The Lichenologist (2020), 52,61–181 doi:10.1017/S0024282920000079 Standard Paper Lichens and associated fungi from Glacier Bay National Park, Alaska Toby Spribille1,2,3 , Alan M. Fryday4 , Sergio Pérez-Ortega5 , Måns Svensson6, Tor Tønsberg7, Stefan Ekman6 , Håkon Holien8,9, Philipp Resl10 , Kevin Schneider11, Edith Stabentheiner2, Holger Thüs12,13 , Jan Vondrák14,15 and Lewis Sharman16 1Department of Biological Sciences, CW405, University of Alberta, Edmonton, Alberta T6G 2R3, Canada; 2Department of Plant Sciences, Institute of Biology, University of Graz, NAWI Graz, Holteigasse 6, 8010 Graz, Austria; 3Division of Biological Sciences, University of Montana, 32 Campus Drive, Missoula, Montana 59812, USA; 4Herbarium, Department of Plant Biology, Michigan State University, East Lansing, Michigan 48824, USA; 5Real Jardín Botánico (CSIC), Departamento de Micología, Calle Claudio Moyano 1, E-28014 Madrid, Spain; 6Museum of Evolution, Uppsala University, Norbyvägen 16, SE-75236 Uppsala, Sweden; 7Department of Natural History, University Museum of Bergen Allégt. 41, P.O. Box 7800, N-5020 Bergen, Norway; 8Faculty of Bioscience and Aquaculture, Nord University, Box 2501, NO-7729 Steinkjer, Norway; 9NTNU University Museum, Norwegian University of Science and Technology, NO-7491 Trondheim, Norway; 10Faculty of Biology, Department I, Systematic Botany and Mycology, University of Munich (LMU), Menzinger Straße 67, 80638 München, Germany; 11Institute of Biodiversity, Animal Health and Comparative Medicine, College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow G12 8QQ, UK; 12Botany Department, State Museum of Natural History Stuttgart, Rosenstein 1, 70191 Stuttgart, Germany; 13Natural History Museum, Cromwell Road, London SW7 5BD, UK; 14Institute of Botany of the Czech Academy of Sciences, Zámek 1, 252 43 Průhonice, Czech Republic; 15Department of Botany, Faculty of Science, University of South Bohemia, Branišovská 1760, CZ-370 05 České Budějovice, Czech Republic and 16Glacier Bay National Park & Preserve, P.O. -
Lichens and Allied Fungi of the Indiana Forest Alliance
2017. Proceedings of the Indiana Academy of Science 126(2):129–152 LICHENS AND ALLIED FUNGI OF THE INDIANA FOREST ALLIANCE ECOBLITZ AREA, BROWN AND MONROE COUNTIES, INDIANA INCORPORATED INTO A REVISED CHECKLIST FOR THE STATE OF INDIANA James C. Lendemer: Institute of Systematic Botany, The New York Botanical Garden, Bronx, NY 10458-5126 USA ABSTRACT. Based upon voucher collections, 108 lichen species are reported from the Indiana Forest Alliance Ecoblitz area, a 900 acre unit in Morgan-Monroe and Yellowwood State Forests, Brown and Monroe Counties, Indiana. The lichen biota of the study area was characterized as: i) dominated by species with green coccoid photobionts (80% of taxa); ii) comprised of 49% species that reproduce primarily with lichenized diaspores vs. 44% that reproduce primarily through sexual ascospores; iii) comprised of 65% crustose taxa, 29% foliose taxa, and 6% fruticose taxa; iv) one wherein many species are rare (e.g., 55% of species were collected fewer than three times) and fruticose lichens other than Cladonia were entirely absent; and v) one wherein cyanolichens were poorly represented, comprising only three species. Taxonomic diversity ranged from 21 to 56 species per site, with the lowest diversity sites concentrated in riparian corridors and the highest diversity sites on ridges. Low Gap Nature Preserve, located within the study area, was found to have comparable species richness to areas outside the nature preserve, although many species rare in the study area were found only outside preserve boundaries. Sets of rare species are delimited and discussed, as are observations as to the overall low abundance of lichens on corticolous substrates and the presence of many unhealthy foliose lichens on mature tree boles. -
A Field Guide to Biological Soil Crusts of Western U.S. Drylands Common Lichens and Bryophytes
A Field Guide to Biological Soil Crusts of Western U.S. Drylands Common Lichens and Bryophytes Roger Rosentreter Matthew Bowker Jayne Belnap Photographs by Stephen Sharnoff Roger Rosentreter, Ph.D. Bureau of Land Management Idaho State Office 1387 S. Vinnell Way Boise, ID 83709 Matthew Bowker, Ph.D. Center for Environmental Science and Education Northern Arizona University Box 5694 Flagstaff, AZ 86011 Jayne Belnap, Ph.D. U.S. Geological Survey Southwest Biological Science Center Canyonlands Research Station 2290 S. West Resource Blvd. Moab, UT 84532 Design and layout by Tina M. Kister, U.S. Geological Survey, Canyonlands Research Station, 2290 S. West Resource Blvd., Moab, UT 84532 All photos, unless otherwise indicated, copyright © 2007 Stephen Sharnoff, Ste- phen Sharnoff Photography, 2709 10th St., Unit E, Berkeley, CA 94710-2608, www.sharnoffphotos.com/. Rosentreter, R., M. Bowker, and J. Belnap. 2007. A Field Guide to Biological Soil Crusts of Western U.S. Drylands. U.S. Government Printing Office, Denver, Colorado. Cover photos: Biological soil crust in Canyonlands National Park, Utah, cour- tesy of the U.S. Geological Survey. 2 Table of Contents Acknowledgements ....................................................................................... 4 How to use this guide .................................................................................... 4 Introduction ................................................................................................... 4 Crust composition .................................................................................. -
Extended Phylogeny and a Revised Generic Classification of The
The Lichenologist 46(5): 627–656 (2014) 6 British Lichen Society, 2014 doi:10.1017/S002428291400019X Extended phylogeny and a revised generic classification of the Pannariaceae (Peltigerales, Ascomycota) Stefan EKMAN, Mats WEDIN, Louise LINDBLOM and Per M. JØRGENSEN Abstract: We estimated phylogeny in the lichen-forming ascomycete family Pannariaceae. We specif- ically modelled spatial (across-site) heterogeneity in nucleotide frequencies, as models not incorpo- rating this heterogeneity were found to be inadequate for our data. Model adequacy was measured here as the ability of the model to reconstruct nucleotide diversity per site in the original sequence data. A potential non-orthologue in the internal transcribed spacer region (ITS) of Degelia plumbea was observed. We propose a revised generic classification for the Pannariaceae, accepting 30 genera, based on our phylogeny, previously published phylogenies, as well as available morphological and chemical data. Four genera are established as new: Austroparmeliella (for the ‘Parmeliella’ lacerata group), Nebularia (for the ‘Parmeliella’ incrassata group), Nevesia (for ‘Fuscopannaria’ sampaiana), and Pectenia (for the ‘Degelia’ plumbea group). Two genera are reduced to synonymy, Moelleropsis (included in Fuscopannaria) and Santessoniella (non-monophyletic; type included in Psoroma). Lepido- collema, described as monotypic, is expanded to include 23 species, most of which have been treated in the ‘Parmeliella’ mariana group. Homothecium and Leightoniella, previously treated in the Collemataceae, are here referred to the Pannariaceae. We propose 41 new species-level combinations in the newly described and re-circumscribed genera mentioned above, as well as in Leciophysma and Psoroma. Key words: Collemataceae, lichen taxonomy, model adequacy, model selection Accepted for publication 13 March 2014 Introduction which include c. -
Revisions of British and Irish Lichens
Revisions of British and Irish Lichens Volume 2 September 2020 Peltigerales: Collemataceae Cover image: Scytinium turgidum, on a limestone grave monument, Abney Park cemetery, Stoke Newington, Middlesex, England. Revisions of British and Irish Lichens is a free-to-access serial publication under the auspices of the British Lichen Society, that charts changes in our understanding of the lichens and lichenicolous fungi of Great Britain and Ireland. Each volume will be devoted to a particular family (or group of families), and will include descriptions, keys, habitat and distribution data for all the species included. The maps are based on information from the BLS Lichen Database, that also includes data from the historical Mapping Scheme and the Lichen Ireland database. The choice of subject for each volume will depend on the extent of changes in classification for the families concerned, and the number of newly recognized species since previous treatments. To date, accounts of lichens from our region have been published in book form. However, the time taken to compile new printed editions of the entire lichen biota of Britain and Ireland is extensive, and many parts are out-of-date even as they are published. Issuing updates as a serial electronic publication means that important changes in understanding of our lichens can be made available with a shorter delay. The accounts may also be compiled at intervals into complete printed accounts, as new editions of the Lichens of Great Britain and Ireland. Editorial Board Dr P.F. Cannon (Department of Taxonomy & Biodiversity, Royal Botanic Gardens, Kew, Surrey TW9 3AB, UK). Dr A. -
Diversity and Distribution Patterns of Endolichenic Fungi in Jeju Island, South Korea
sustainability Article Diversity and Distribution Patterns of Endolichenic Fungi in Jeju Island, South Korea Seung-Yoon Oh 1,2 , Ji Ho Yang 1, Jung-Jae Woo 1,3, Soon-Ok Oh 3 and Jae-Seoun Hur 1,* 1 Korean Lichen Research Institute, Sunchon National University, 255 Jungang-Ro, Suncheon 57922, Korea; [email protected] (S.-Y.O.); [email protected] (J.H.Y.); [email protected] (J.-J.W.) 2 Department of Biology and Chemistry, Changwon National University, 20 Changwondaehak-ro, Changwon 51140, Korea 3 Division of Forest Biodiversity, Korea National Arboretum, 415 Gwangneungsumok-ro, Pocheon 11186, Korea; [email protected] * Correspondence: [email protected]; Tel.: +82-61-750-3383 Received: 24 March 2020; Accepted: 1 May 2020; Published: 6 May 2020 Abstract: Lichens are symbiotic organisms containing diverse microorganisms. Endolichenic fungi (ELF) are one of the inhabitants living in lichen thalli, and have potential ecological and industrial applications due to their various secondary metabolites. As the function of endophytic fungi on the plant ecology and ecosystem sustainability, ELF may have an influence on the lichen diversity and the ecosystem, functioning similarly to the influence of endophytic fungi on plant ecology and ecosystem sustainability, which suggests the importance of understanding the diversity and community pattern of ELF. In this study, we investigated the diversity and the factors influencing the community structure of ELF in Jeju Island, South Korea by analyzing 619 fungal isolates from 79 lichen samples in Jeju Island. A total of 112 ELF species was identified and the most common species belonged to Xylariales in Sordariomycetes. -
Collemataceae, Peltigerales, Lecanoromycetes)
Studies in Fungi 2 (1): 208–209 (2017) www.studiesinfungi.org ISSN 2465-4973 Article Doi 10.5943/sif/2/1/23 Copyright © Mushroom Research Foundation The genus Paracollema validated (Collemataceae, Peltigerales, Lecanoromycetes) Wedin M1, Otalora MAG2 and Jørgensen PM3 1 Department of Botany, Swedish Museum of Natural History, P.O. Box 50007, SE-104 05 Stockholm, Sweden. 2 Institute of Integrative Biology, ETH Zürich, Universitätsstrasse 16, CHN G 28.1, 8092 Zürich, Switzerland. 3 Museum of Natural History, University of Bergen, Allégt. 41, Box 7800, N-5020 Bergen, Norway. Wedin M, Otalora MAG, Jørgensen PM 2017 – The genus Paracollema validated (Collemataceae, Peltigerales, Lecanoromycetes). Studies in Fungi 2(1), 208–209, Doi 10.5943/sif/2/1/23 Abstract The invalid generic name Paracollema Otálora & Wedin is validated, as are the combinations Paracollema almbornii (Degel.) Otálora, P.M. Jørg. & Wedin and Paracollema italicum (de Lesd.) Otálora, P.M. Jørg. & Wedin. Key words – lichens – nomenclature – taxonomy Introduction In the recent treatment of the Collemataceae by Otálora et al. (2013[“2014”]) the new genus Paracollema Otálora & Wedin was not validly published due to an unfortunate misprint of the required identifier number (Art. 42.1). As a consequence, the two combinations made in Paracollema in the same publications were also invalid (Art. 35.1). We rectify all these errors below. Nomenclature Paracollema Otálora & Wedin gen. nov. MycoBank: MB805692 Type species – Paracollema italicum (B. de Lesd.) Otálora, P.M. Jørg. & Wedin, holotype. Etymology – Paracollema, a derivation of Collema. Icon – Otálora et al. 2013 (“2014”), Fig. 5J (habitus) Thallus foliose, small (up to 1cm diam.), homoiomerous, dark olive green to brownish; lobes small, entire and rounded, up to 3 (1.0-2.5) mm wide; lobe surface smooth or slightly wrinkled; cortex absent; isidia present or absent; tomentum absent. -
Checklist of the Iichens of Israel
Bocconea 6 - 1996 149 Margalith Galun & A vihay Mukhtar Checklist of the Iichens of Israel Abstract Galun, M, & Mukhtar, A.: Checklist of the Lichens of lsrael. - Bocconea 6: 149 - 171. 1996. - ISSN I 120-4060. This checklist of the lichens of lsrael (including the Sinai Peninsula) is based on a screening of relevant literature and on the analysis of originai material; it includes 234 infrageneric taxa. The following taxa were not reported from lsrael in the previous literature: Bacidia naegelii, Clauzadea chondrodes, Collerna eoecophorum, C.jlaceidum, Dermatocarpon wa/thekii, Hyperphyscia adg/u/inata, Leeanora eh/aro/era, Lecidea lurida, Leptogium comieu/atum, Oehro/echia palleseens, Pelru/a eup/oca, Physcia semipinnata, P/acidiopsis dalmatica, Te/oschis/es vi//osus and The/enella hassei. Introduction Lichenology in Israel is relatively recent, the first rekvant paper dating back to 1936 (Reiehert 1936). L Reichert was the first leading plant pathologist of what was at that ti me Palestine. After his retirement, he donated his unique liehen colleetion, eomprising speeimens from Lebanon, Syria, lordan, Egypt and Israel, together with his liehenological library, to the Department of Botany of the Tel-Aviv University. The Iibrary included the c1assieal works by E. Aeharius, Abbé Hue, Th. Fries, A. von Krempelhuber, W. Nylander, A. Zahlbruekner and others. These served as basis for the liehenologieal studies by M. Galun and her students. Thc exploration of the liehen flora of Israel, and the publieation of the book: "The liehens of Israel" (Gal un 1970), were supported by The Aeademy of Seienee and Humanities, eneouragcd by the late Professor Aharon Katzir, then president of the Aeademy. -
2014 Newsletter
2014 Newsletter Events: Upcoming: NWL / NWSA Meeting………………………….......….…………….2 Recent: Moses Coulee Soil Crust Survey…………...….………………………3 2013 Certification Program…..……………………………………………....5 Workshops / Courses: Upcoming: Siskiyou Field Institute………………………………..……………….....6 Northwest Botanical Institute.………………………………………...7 Cryptogam Biodiversity Observatory and Northwest Lichenologists ……………………………………………....8 News and Projects from NW Lichenologists at Home and Abroad: Trevor Goward: Edgewood Lichen Revival II..…………………….....9 Fred Rhoades: lichen stereocards……..……………...…..…………..11 Bruce McCune: Nomenclatural Changes in Collema and Leptogium in the PacificNorthwest………………………………………13 Jeanne Ponzetti: Washington’s Rare Lichens.………………………..15 Steve Sheehy: Lichen Survey at Lava beds National Monument.……16 John Villella: updated bio......………...…...………………………….17 Lichen Apparel and Publications ...………………………………………...18 Miscellaneous: Lichen Blitz…………………………………………………………...20 1 Upcoming Events NWL Annual General Meeting Our annual general meeting is generally held in conjunction with the Northwest Scientific Association. The 85th Annual Conference of the Northwest Scientific Association / Plum Creek Distinguished Lecture Series Our program schedule and conference details are at http://www.northwestscience.org/ (Select Annual Meeting, then At A Glance & Program Technical Sessions) The Future of Forests & Forest Management: Change, Uncertainty, and Adaptation, University of Montana – Missoula, March 26-29, 2014. Our Invited speakers for the Plum Creek Distinguished -
The Nostoc Symbiont of Lichens
Comprehensive Summaries of Uppsala Dissertations from the Faculty of Science and Technology 662 The Nostoc Symbiont of Lichens Diversity, Specificity and Cellular Modifications BY PER PAULSRUD ACTA UNIVERSITATIS UPSALIENSIS UPPSALA 2001 Dissertation for the Degree of Doctor of Philosophy in Physiological Botany presented at Uppsala University in 2001 ABSTRACT Paulsrud, P. 2001. The Nostoc Symbiont of Lichens. Diversity, Specicity and Cellular Modications. Acta Universitatis Upsaliensis. Comprehensive Summaries of Uppsala Disser- tations from the Faculty of Science and Technology 662. 55 pp. Uppsala. ISBN 91-554- 5136-5. Cyanobacteria belonging to the genus Nostoc have the capacity to form symbiotic associa- tions with a wide range of organisms. Diversity, specificity and cellular modifications of the symbiosis between Nostoc and fungi in the formation of lichens were investigated in this thesis. The use of the tRNALeuuaa intron as a genetic marker for the subgeneric identifica- tion of Nostoc in complex field material was developed. Lichens belonging to the genera Peltigera and Nephroma show limited variability in their Nostoc symbionts. The in situ symbiont consists of a single strain rather than a community of different Nostocs, and single thalli consistently contained the same symbiont. Patterns in symbiont identity were found in geographically remote populations and the lichen species, rather than growth locality, was shown to be important for the identity of the Nostoc symbiont. Examination of a P. aphthosa photosymbiodeme revealed that one Nostoc has the capacity to perform the physiological roles found in both bipartite and tripartite lichens. The symbiotic association between bryophytes and Nostoc on the other hand exhibited a much greater variation of Nostoc symbionts.