Carbon Cycling and Biosequestration Workshop Report, March 2008

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Carbon Cycling and Biosequestration Workshop Report, March 2008 DOE/SC-108 Carbon Cycling and Biosequestration Integrating Biology and Climate Through Systems Science Report from the March 2008 Workshop U.S. Department of Energy Office of Science Office of Biological and Environmental Research DOE/SC-108 Carbon Cycling and Biosequestration Integrating Biology and Climate Through Systems Science Report from the March 2008 Workshop Workshop Dates: March 4–6 and 17–18, 2008 Report Publication Date: December 2008 U.S. Department of Energy Office of Science Office of Biological and Environmental Research Carbon Cycling and Biosequestration Workshop Report: http://genomicsgtl.energy.gov/carboncycle/ U.S. Department of Energy Office of Science Carbon Cycling and Biosequestration Workshop ii Contents Executive Summary .............................................................................................................................................................................v Overview ..............................................................................................................................................................................................1 DOE Workshop on Biological Carbon Cycling and Biosequestration Research ............................................................................................................ 1 Introduction ............................................................................................................................................................................................................. 4 Accurate Climate Projections, Effective Mitigation and Adaptation Strategies Depend on Understanding the Global Carbon Cycle .......................... 4 Biology’s Critical Role in the Carbon Cycle ................................................................................................................................................................. 7 Ecosystem Response in a Changing Climate ............................................................................................................................................................ 10 Technical Strategy .............................................................................................................................................................................13 Integrated Science for Predicting Carbon Cycle Responses ...................................................................................................................................... 13 Summary of Research Requirements for Biological Carbon Cycling and Biosequestration ...................................................................................... 23 Interdisciplinary Projects and Training .................................................................................................................................................................... 26 Carbon Flows in Ecosystems—Ecosystem Processes .......................................................................................................................27 Plant Productivity, Partitioning, Respiration, Recalcitrance, Plant-Soil Interactions, and Carbon Biosequestration ................................................ 27 Carbon Flows and Stocks in Soils ............................................................................................................................................................................ 33 Controlling Factors of Carbon Recalcitrance and Biosequestration .......................................................................................................................... 47 Ecosystem and Plant Response to Environmental Variables and Climate Change ........................................................................59 Biotic and Abiotic Interactions in Ecosystems ......................................................................................................................................................... 59 Experimental Responses of Different Biomes to Atmospheric and Climatic Change ................................................................................................ 63 Plant-Soil Interactions (Soil Physicochemistry) ...................................................................................................................................................... 65 Ecosystem Dynamics .........................................................................................................................................................................71 Stand Development in Forests: Baseline Maturation and Aging of Ecosystems ....................................................................................................... 71 The Role of Plant-Trait Variation in Ecosystem Response to Chronic Stress Arising from Climate Change ................................................................ 72 Interannual Variability: Episodic Stress ................................................................................................................................................................... 74 Disturbance and the Dynamics of Carbon Cycling and Biosequestration ................................................................................................................. 75 Biogeochemical Cycling of Carbon in Oceans and Climate Change .................................................................................................79 Marine Carbon “Pumps” and Potential Consequences of Climate Change ............................................................................................................... 79 Linking Microbial Community Structure to Biogeochemical Cycling of Carbon in Marine Systems .......................................................................... 83 Interactions Between the Marine Carbon Cycle and Other Relevant Biogeochemical Cycles (Nitrogen, Phosphorus, Iron, and Sulfur) .................... 84 Omic and Systems Biology Approaches to Understanding the Marine Carbon Cycle ............................................................................................... 85 Integration of Experiments, Observations, and Modeling Efforts ............................................................................................................................ 86 Integrating Biology and Climate Through Systems Science ...........................................................................................................95 Genomics and Systems Biology .............................................................................................................................................................................. 95 Knowledge Integration and Synthesis with Biogeochemical Models .................................................................................................................... 101 Crosscutting Issues, Measurement Methods, and Strategies ................................................................................................................................. 107 Carbon Cycling and Biosequestration Workshop Participants and Agendas ................................................................................113 Glossary............................................................................................................................................................................................117 Bibliography ....................................................................................................................................................................................125 Acronyms and Abbreviations .....................................................................................................................................Inside back cover Carbon Cycling and Biosequestration Workshop U.S. Department of Energy Office of Science iii U.S. Department of Energy Office of Science Carbon Cycling and Biosequestration Workshop iv E Executive Summary XECUTIVE ne of the most daunting challenges facing science in the 21st Century is to predict how Earth’s ecosystems will respond to global climate change. The global carbon cycle plays a central role in regulating atmospheric Ocarbon dioxide (CO ) levels and thus Earth’s climate, but our basic understand­ S 2 ing of the myriad of tightly interlinked biological processes that drive the global U M M A R Y carbon cycle remains limited at best. Whether terrestrial and ocean ecosystems will capture, store, or release carbon is highly dependent on how changing climate conditions affect processes performed by the organisms that form Earth’s bio­ sphere. Advancing our knowledge of biological components of the global carbon cycle is thus crucial to predicting potential climate change impacts, assessing the viability of climate change adaptation and mitigation strategies, and informing relevant policy decisions. Global carbon cycling is dominated by the paired biological processes of pho­ tosynthesis and respiration. Photosynthetic plants and microbes of Earth’s land­ masses and oceans use solar energy to transform atmospheric CO2 into organic carbon. The majority of this organic carbon is rapidly consumed by plants or microbial decomposers for respiration and returned to the atmosphere as CO2. Coupling between the two processes results in a near equilibrium between photo­ synthesis and respiration at the global scale, but some fraction of organic carbon also remains in stabilized forms such as biomass, soil, and deep ocean sediments. This process, known as carbon biosequestration, temporarily removes
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