Crustacea: Decapoda: Thalassinidea)
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National Monitoring Program for Biodiversity and Non-Indigenous Species in Egypt
UNITED NATIONS ENVIRONMENT PROGRAM MEDITERRANEAN ACTION PLAN REGIONAL ACTIVITY CENTRE FOR SPECIALLY PROTECTED AREAS National monitoring program for biodiversity and non-indigenous species in Egypt PROF. MOUSTAFA M. FOUDA April 2017 1 Study required and financed by: Regional Activity Centre for Specially Protected Areas Boulevard du Leader Yasser Arafat BP 337 1080 Tunis Cedex – Tunisie Responsible of the study: Mehdi Aissi, EcApMEDII Programme officer In charge of the study: Prof. Moustafa M. Fouda Mr. Mohamed Said Abdelwarith Mr. Mahmoud Fawzy Kamel Ministry of Environment, Egyptian Environmental Affairs Agency (EEAA) With the participation of: Name, qualification and original institution of all the participants in the study (field mission or participation of national institutions) 2 TABLE OF CONTENTS page Acknowledgements 4 Preamble 5 Chapter 1: Introduction 9 Chapter 2: Institutional and regulatory aspects 40 Chapter 3: Scientific Aspects 49 Chapter 4: Development of monitoring program 59 Chapter 5: Existing Monitoring Program in Egypt 91 1. Monitoring program for habitat mapping 103 2. Marine MAMMALS monitoring program 109 3. Marine Turtles Monitoring Program 115 4. Monitoring Program for Seabirds 118 5. Non-Indigenous Species Monitoring Program 123 Chapter 6: Implementation / Operational Plan 131 Selected References 133 Annexes 143 3 AKNOWLEGEMENTS We would like to thank RAC/ SPA and EU for providing financial and technical assistances to prepare this monitoring programme. The preparation of this programme was the result of several contacts and interviews with many stakeholders from Government, research institutions, NGOs and fishermen. The author would like to express thanks to all for their support. In addition; we would like to acknowledge all participants who attended the workshop and represented the following institutions: 1. -
High Level Environmental Screening Study for Offshore Wind Farm Developments – Marine Habitats and Species Project
High Level Environmental Screening Study for Offshore Wind Farm Developments – Marine Habitats and Species Project AEA Technology, Environment Contract: W/35/00632/00/00 For: The Department of Trade and Industry New & Renewable Energy Programme Report issued 30 August 2002 (Version with minor corrections 16 September 2002) Keith Hiscock, Harvey Tyler-Walters and Hugh Jones Reference: Hiscock, K., Tyler-Walters, H. & Jones, H. 2002. High Level Environmental Screening Study for Offshore Wind Farm Developments – Marine Habitats and Species Project. Report from the Marine Biological Association to The Department of Trade and Industry New & Renewable Energy Programme. (AEA Technology, Environment Contract: W/35/00632/00/00.) Correspondence: Dr. K. Hiscock, The Laboratory, Citadel Hill, Plymouth, PL1 2PB. [email protected] High level environmental screening study for offshore wind farm developments – marine habitats and species ii High level environmental screening study for offshore wind farm developments – marine habitats and species Title: High Level Environmental Screening Study for Offshore Wind Farm Developments – Marine Habitats and Species Project. Contract Report: W/35/00632/00/00. Client: Department of Trade and Industry (New & Renewable Energy Programme) Contract management: AEA Technology, Environment. Date of contract issue: 22/07/2002 Level of report issue: Final Confidentiality: Distribution at discretion of DTI before Consultation report published then no restriction. Distribution: Two copies and electronic file to DTI (Mr S. Payne, Offshore Renewables Planning). One copy to MBA library. Prepared by: Dr. K. Hiscock, Dr. H. Tyler-Walters & Hugh Jones Authorization: Project Director: Dr. Keith Hiscock Date: Signature: MBA Director: Prof. S. Hawkins Date: Signature: This report can be referred to as follows: Hiscock, K., Tyler-Walters, H. -
The Role of Neaxius Acanthus
Wattenmeerstation Sylt The role of Neaxius acanthus (Thalassinidea: Strahlaxiidae) and its burrows in a tropical seagrass meadow, with some remarks on Corallianassa coutierei (Thalassinidea: Callianassidae) Diplomarbeit Institut für Biologie / Zoologie Fachbereich Biologie, Chemie und Pharmazie Freie Universität Berlin vorgelegt von Dominik Kneer Angefertigt an der Wattenmeerstation Sylt des Alfred-Wegener-Instituts für Polar- und Meeresforschung in der Helmholtz-Gemeinschaft In Zusammenarbeit mit dem Center for Coral Reef Research der Hasanuddin University Makassar, Indonesien Sylt, Mai 2006 1. Gutachter: Prof. Dr. Thomas Bartolomaeus Institut für Biologie / Zoologie Freie Universität Berlin Berlin 2. Gutachter: Prof. Dr. Walter Traunspurger Fakultät für Biologie / Tierökologie Universität Bielefeld Bielefeld Meinen Eltern (wem sonst…) Table of contents 4 Abstract ...................................................................................................................................... 6 Zusammenfassung...................................................................................................................... 8 Abstrak ..................................................................................................................................... 10 Abbreviations ........................................................................................................................... 12 1 Introduction .......................................................................................................................... -
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https://theses.gla.ac.uk/ Theses Digitisation: https://www.gla.ac.uk/myglasgow/research/enlighten/theses/digitisation/ This is a digitised version of the original print thesis. Copyright and moral rights for this work are retained by the author A copy can be downloaded for personal non-commercial research or study, without prior permission or charge This work cannot be reproduced or quoted extensively from without first obtaining permission in writing from the author The content must not be changed in any way or sold commercially in any format or medium without the formal permission of the author When referring to this work, full bibliographic details including the author, title, awarding institution and date of the thesis must be given Enlighten: Theses https://theses.gla.ac.uk/ [email protected] ASPECTS OF THE BIOLOGY OF THE SQUAT LOBSTER, MUNIDA RUGOSA (FABRICIUS, 1775). Khadija Abdulla Yousuf Zainal, BSc. (Cairo). A thesis submitted for the degree of Doctor of Philosophy to the Faculty of Science at the University of Glasgow. August 1990 Department of Zoology, University of Glasgow, Glasgow, G12 8QQ. University Marine Biological Station, Millport, Isle of Cumbrae, Scotland KA28 OEG. ProQuest Number: 11007559 All rights reserved INFORMATION TO ALL USERS The quality of this reproduction is dependent upon the quality of the copy submitted. In the unlikely event that the author did not send a com plete manuscript and there are missing pages, these will be noted. Also, if material had to be removed, a note will indicate the deletion. uest ProQuest 11007559 Published by ProQuest LLC(2018). -
Evolutionary History of Inversions in the Direction of Architecture-Driven
bioRxiv preprint doi: https://doi.org/10.1101/2020.05.09.085712; this version posted May 10, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC 4.0 International license. Evolutionary history of inversions in the direction of architecture- driven mutational pressures in crustacean mitochondrial genomes Dong Zhang1,2, Hong Zou1, Jin Zhang3, Gui-Tang Wang1,2*, Ivan Jakovlić3* 1 Key Laboratory of Aquaculture Disease Control, Ministry of Agriculture, and State Key Laboratory of Freshwater Ecology and Biotechnology, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan 430072, China. 2 University of Chinese Academy of Sciences, Beijing 100049, China 3 Bio-Transduction Lab, Wuhan 430075, China * Corresponding authors Short title: Evolutionary history of ORI events in crustaceans Abbreviations: CR: control region, RO: replication of origin, ROI: inversion of the replication of origin, D-I skew: double-inverted skew, LBA: long-branch attraction bioRxiv preprint doi: https://doi.org/10.1101/2020.05.09.085712; this version posted May 10, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC 4.0 International license. Abstract Inversions of the origin of replication (ORI) of mitochondrial genomes produce asymmetrical mutational pressures that can cause artefactual clustering in phylogenetic analyses. It is therefore an absolute prerequisite for all molecular evolution studies that use mitochondrial data to account for ORI events in the evolutionary history of their dataset. -
From Ghost and Mud Shrimp
Zootaxa 4365 (3): 251–301 ISSN 1175-5326 (print edition) http://www.mapress.com/j/zt/ Article ZOOTAXA Copyright © 2017 Magnolia Press ISSN 1175-5334 (online edition) https://doi.org/10.11646/zootaxa.4365.3.1 http://zoobank.org/urn:lsid:zoobank.org:pub:C5AC71E8-2F60-448E-B50D-22B61AC11E6A Parasites (Isopoda: Epicaridea and Nematoda) from ghost and mud shrimp (Decapoda: Axiidea and Gebiidea) with descriptions of a new genus and a new species of bopyrid isopod and clarification of Pseudione Kossmann, 1881 CHRISTOPHER B. BOYKO1,4, JASON D. WILLIAMS2 & JEFFREY D. SHIELDS3 1Division of Invertebrate Zoology, American Museum of Natural History, Central Park West @ 79th St., New York, New York 10024, U.S.A. E-mail: [email protected] 2Department of Biology, Hofstra University, Hempstead, New York 11549, U.S.A. E-mail: [email protected] 3Department of Aquatic Health Sciences, Virginia Institute of Marine Science, College of William & Mary, P.O. Box 1346, Gloucester Point, Virginia 23062, U.S.A. E-mail: [email protected] 4Corresponding author Table of contents Abstract . 252 Introduction . 252 Methods and materials . 253 Taxonomy . 253 Isopoda Latreille, 1817 . 253 Bopyroidea Rafinesque, 1815 . 253 Ionidae H. Milne Edwards, 1840. 253 Ione Latreille, 1818 . 253 Ione cornuta Bate, 1864 . 254 Ione thompsoni Richardson, 1904. 255 Ione thoracica (Montagu, 1808) . 256 Bopyridae Rafinesque, 1815 . 260 Pseudioninae Codreanu, 1967 . 260 Acrobelione Bourdon, 1981. 260 Acrobelione halimedae n. sp. 260 Key to females of species of Acrobelione Bourdon, 1981 . 262 Gyge Cornalia & Panceri, 1861. 262 Gyge branchialis Cornalia & Panceri, 1861 . 262 Gyge ovalis (Shiino, 1939) . 264 Ionella Bonnier, 1900 . -
Zootaxa: Systematics of the Genus Scleroplax Rathbun, 1893
Zootaxa 1344: 33–41 (2006) ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ ZOOTAXA 1344 Copyright © 2006 Magnolia Press ISSN 1175-5334 (online edition) Systematics of the genus Scleroplax Rathbun, 1893 (Crustacea: Brachyura: Pinnotheridae) ERNESTO CAMPOS Facultad de Ciencias, Universidad Autónoma de Baja California, Apartado Postal 2300, Ensenada, Baja California, 22800 México. E-mail: [email protected]; [email protected] Abstract The taxonomic status of the monotypic genus Scleroplax Rathbun, 1893, is evaluated and separated from other genera of the Pinnixa White, 1846, complex. Distinguishing characters of Scleroplax are a hard, subheptagonal and dorsally, highly convex carapace, and a third maxilliped with a propodus that extends to the end of the dactylus. The genera Scleroplax, Pinnixa, Austinixa Heard & Manning, 1997, Glassella Campos & Wicksten, 1997, Indopinnixa Manning & Morton, 1987, and Tetrias Rathbun, 1898, share a carapace than is wider than long and a distinct lateral exopod lobe on the third maxilliped, all of which may represent monophyletic characters. Updated information on the distribution and hosts of S. granulata Rathbun, 1893, indicate that the species now ranges from Vancouver Island, British Columbia, Canada to El Coyote estuary, Punta Abreojos, Baja California Sur, México. It inhabits burrows of the echiuroid Urechis caupo Fisher & MacGinitie, 1928, and the mud shrimps Neotrypaea californiensis (Dana, 1854), N. gigas (Dana, 1852) (new host record), Upogebia pugettensis (Dana, 1852), and occasionally U. macginiteorum Williams, 1986 (new host record). Key words: Crustacea, Brachyura, Pinnotheridae, Scleroplax, systematics, geographic distribution, new hosts Resumen El estatus taxonómico del género monotípico Scleroplax Rathbun, 1893, es evaluado y separado de otros géneros del complejo Pinnixa White, 1846. -
The Mediterranean Decapod and Stomatopod Crustacea in A
ANNALES DU MUSEUM D'HISTOIRE NATURELLE DE NICE Tome V, 1977, pp. 37-88. THE MEDITERRANEAN DECAPOD AND STOMATOPOD CRUSTACEA IN A. RISSO'S PUBLISHED WORKS AND MANUSCRIPTS by L. B. HOLTHUIS Rijksmuseum van Natuurlijke Historie, Leiden, Netherlands CONTENTS Risso's 1841 and 1844 guides, which contain a simple unannotated list of Crustacea found near Nice. 1. Introduction 37 Most of Risso's descriptions are quite satisfactory 2. The importance and quality of Risso's carcino- and several species were figured by him. This caused logical work 38 that most of his names were immediately accepted by 3. List of Decapod and Stomatopod species in Risso's his contemporaries and a great number of them is dealt publications and manuscripts 40 with in handbooks like H. Milne Edwards (1834-1840) Penaeidea 40 "Histoire naturelle des Crustaces", and Heller's (1863) Stenopodidea 46 "Die Crustaceen des siidlichen Europa". This made that Caridea 46 Risso's names at present are widely accepted, and that Macrura Reptantia 55 his works are fundamental for a study of Mediterranean Anomura 58 Brachyura 62 Decapods. Stomatopoda 76 Although most of Risso's descriptions are readily 4. New genera proposed by Risso (published and recognizable, there is a number that have caused later unpublished) 76 authors much difficulty. In these cases the descriptions 5. List of Risso's manuscripts dealing with Decapod were not sufficiently complete or partly erroneous, and Stomatopod Crustacea 77 the names given by Risso were either interpreted in 6. Literature 7S different ways and so caused confusion, or were entirely ignored. It is a very fortunate circumstance that many of 1. -
Upogebia Pugettensis Class: Malacostraca Order: Decapoda Section: Anomura, Paguroidea the Blue Mud Shrimp Family: Upogebiidae
Phylum: Arthropoda, Crustacea Upogebia pugettensis Class: Malacostraca Order: Decapoda Section: Anomura, Paguroidea The blue mud shrimp Family: Upogebiidae Taxonomy: Dana described Gebia (on either side of the mouth), two pairs of pugettensis in 1852 and this species was later maxillae and three pairs of maxillipeds. The redescribed as Upogebia pugettensis maxillae and maxillipeds attach posterior to (Stevens 1928; Williams 1986). the mouth and extend to cover the mandibles (Ruppert et al. 2004). Description Carapace: Bears two rows of 11–12 Size: The type specimen was 50.8 mm in teeth laterally (Fig. 1) in addition to a small length and the illustrated specimen (ovigerous distal spines (13 distal spines, 20 lateral teeth female from Coos Bay, Fig. 1) was 90 mm in on carapace shoulder, see Wicksten 2011). length. Individuals are often larger and reach Carapace with thalassinidean line extending sizes to 100 mm (range 75–112 mm) and from anterior to posterior margin (Wicksten northern specimens are larger than those in 2011). southern California (MacGinitie and Rostrum: Large, tridentate, obtuse, MacGinitie 1949; Wicksten 2011). rough and hairy (Schmitt 1921), the sides Color: Light blue green to deep olive brown bear 3–5 short conical teeth (Wicksten 2011). with brown fringes on pleopods and pleon. Rostral tip shorter than antennular peduncle. Individual color variable and may depend on Two short processes extending on either side feeding habits (see Fig. 321, Kozloff 1993; each with 0–2 dorsal teeth (Wicksten 2011). Wicksten 2011). Teeth: General Morphology: The body of decapod Pereopods: Two to five simple crustaceans can be divided into the walking legs. -
Systematics, Phylogeny, and Taphonomy of Ghost Shrimps (Decapoda): a Perspective from the Fossil Record
73 (3): 401 – 437 23.12.2015 © Senckenberg Gesellschaft für Naturforschung, 2015. Systematics, phylogeny, and taphonomy of ghost shrimps (Decapoda): a perspective from the fossil record Matúš Hyžný *, 1, 2 & Adiël A. Klompmaker 3 1 Geological-Paleontological Department, Natural History Museum Vienna, Burgring 7, 1010 Vienna, Austria; Matúš Hyžný [hyzny.matus@ gmail.com] — 2 Department of Geology and Paleontology, Faculty of Natural Sciences, Comenius University, Mlynská dolina, Ilkovičova 6, SVK-842 15 Bratislava, Slovakia — 3 Florida Museum of Natural History, University of Florida, 1659 Museum Road, PO Box 117800, Gaines- ville, FL 32611, USA; Adiël A. Klompmaker [[email protected]] — * Correspond ing author Accepted 06.viii.2015. Published online at www.senckenberg.de/arthropod-systematics on 14.xii.2015. Editor in charge: Stefan Richter. Abstract Ghost shrimps of Callianassidae and Ctenochelidae are soft-bodied, usually heterochelous decapods representing major bioturbators of muddy and sandy (sub)marine substrates. Ghost shrimps have a robust fossil record spanning from the Early Cretaceous (~ 133 Ma) to the Holocene and their remains are present in most assemblages of Cenozoic decapod crustaceans. Their taxonomic interpretation is in flux, mainly because the generic assignment is hindered by their insufficient preservation and disagreement in the biological classification. Fur- thermore, numerous taxa are incorrectly classified within the catch-all taxonCallianassa . To show the historical patterns in describing fos- sil ghost shrimps and to evaluate taphonomic aspects influencing the attribution of ghost shrimp remains to higher level taxa, a database of all fossil species treated at some time as belonging to the group has been compiled: 250 / 274 species are considered valid ghost shrimp taxa herein. -
Two New Paleogene Species of Mud Shrimp (Crustacea, Decapoda, Upogebiidae) from Europe and North America
Bulletin of the Mizunami Fossil Museum, no. 33 (2006), p. 77–85, 2 pls., 1 fig. © 2006, Mizunami Fossil Museum Two new Paleogene species of mud shrimp (Crustacea, Decapoda, Upogebiidae) from Europe and North America Rene H. B. Fraaije1, Barry W. M. van Bakel1, John W. M. Jagt2, and Yvonne Coole3 1Oertijdmuseum De Groene Poort, Bosscheweg 80, NL-5283 WB Boxtel, the Netherlands <[email protected]> 2Natuurhistorisch Museum Maastricht, de Bosquetplein 6-7, NL-6211 KJ Maastricht, the Netherlands <[email protected]> 3St. Maartenslaan 88, NL-6039 BM Stramproy, the Netherlands Abstract Two new species of the mud shrimp genus Upogebia (Callianassoidea, Upogebiidae) are described; U. lambrechtsi sp. nov. from the lower Eocene (Ypresian) of Egem (northwest Belgium), and U. barti sp. nov. from the upper Oligocene (Chattian) of Washington State (USA). Both new species here described have been collected from small, ball-shaped nodules; they are relatively well preserved and add important new data on the palaeobiogeographic distribution of fossil upogebiids. Key words: Crustacea, Decapoda, Upogebiidae, Eocene, Oligocene, Belgium, USA, new species Introduction Jurassic species of Upogebia have been recorded, in stratigraphic order: On modern tidal flats, burrowing upogebiid shrimps constitute the dominant decapod crustacean group. For instance, in the 1 – Upogebia rhacheochir Stenzel, 1945 (p. 432, text-fig. 12; pl. intertidal zone of the northern Adriatic (Mediterranean, southern 42); Britton Formation (Eagle Ford Group), northwest of Dallas Europe) up to 200 individuals per square metre have been recorded (Texas, USA). Stenzel (1945, p. 408) dated the Britton (Dworschak, 1987). Worldwide, several dozens of species of Formation as early Turonian, but a late Cenomanian age is Upogebia and related genera are known, and their number is still more likely (compare Jacobs et al., 2005). -
OREGON ESTUARINE INVERTEBRATES an Illustrated Guide to the Common and Important Invertebrate Animals
OREGON ESTUARINE INVERTEBRATES An Illustrated Guide to the Common and Important Invertebrate Animals By Paul Rudy, Jr. Lynn Hay Rudy Oregon Institute of Marine Biology University of Oregon Charleston, Oregon 97420 Contract No. 79-111 Project Officer Jay F. Watson U.S. Fish and Wildlife Service 500 N.E. Multnomah Street Portland, Oregon 97232 Performed for National Coastal Ecosystems Team Office of Biological Services Fish and Wildlife Service U.S. Department of Interior Washington, D.C. 20240 Table of Contents Introduction CNIDARIA Hydrozoa Aequorea aequorea ................................................................ 6 Obelia longissima .................................................................. 8 Polyorchis penicillatus 10 Tubularia crocea ................................................................. 12 Anthozoa Anthopleura artemisia ................................. 14 Anthopleura elegantissima .................................................. 16 Haliplanella luciae .................................................................. 18 Nematostella vectensis ......................................................... 20 Metridium senile .................................................................... 22 NEMERTEA Amphiporus imparispinosus ................................................ 24 Carinoma mutabilis ................................................................ 26 Cerebratulus californiensis .................................................. 28 Lineus ruber .........................................................................