4.2 Nomenclature of Alkenes 131
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Common Names for Selected Aromatic Groups
More Nomenclature: Common Names for Selected Aromatic Groups Phenyl group = or Ph = C6H5 = Aryl = Ar = aromatic group. It is a broad term, and includes any aromatic rings. Benzyl = Bn = It has a -CH2- (methylene) group attached to the benzene ring. This group can be used to name particular compounds, such as the one shown below. This compound has chlorine attached to a benzyl group, therefore it is called benzyl chloride. Benzoyl = Bz = . This is different from benzyl group (there is an extra “o” in the name). It has a carbonyl attached to the benzene ring instead of a methylene group. For example, is named benzoyl chloride. Therefore, it is sometimes helpful to recognize a common structure in order to name a compound. Example: Nomenclature: 3-phenylpentane Example: This is Amaize. It is used to enhance the yield of corn production. The systematic name for this compound is 2,4-dinitro-6-(1-methylpropyl)phenol. Polynuclear Aromatic Compounds Aromatic rings can fuse together to form polynuclear aromatic compounds. Example: It is two benzene rings fused together, and it is aromatic. The electrons are delocalized in both rings (think about all of its resonance form). Example: This compound is also aromatic, including the ring in the middle. All carbons are sp2 hybridized and the electron density is shared across all 5 rings. Example: DDT is an insecticide and helped to wipe out malaria in many parts of the world. Consequently, the person who discovered it (Muller) won the Nobel Prize in 1942. The systematic name for this compound is 1,1,1-trichloro-2,2-bis-(4-chlorophenyl)ethane. -
Chapter 21 the Chemistry of Carboxylic Acid Derivatives
Instructor Supplemental Solutions to Problems © 2010 Roberts and Company Publishers Chapter 21 The Chemistry of Carboxylic Acid Derivatives Solutions to In-Text Problems 21.1 (b) (d) (e) (h) 21.2 (a) butanenitrile (common: butyronitrile) (c) isopentyl 3-methylbutanoate (common: isoamyl isovalerate) The isoamyl group is the same as an isopentyl or 3-methylbutyl group: (d) N,N-dimethylbenzamide 21.3 The E and Z conformations of N-acetylproline: 21.5 As shown by the data above the problem, a carboxylic acid has a higher boiling point than an ester because it can both donate and accept hydrogen bonds within its liquid state; hydrogen bonding does not occur in the ester. Consequently, pentanoic acid (valeric acid) has a higher boiling point than methyl butanoate. Here are the actual data: INSTRUCTOR SUPPLEMENTAL SOLUTIONS TO PROBLEMS • CHAPTER 21 2 21.7 (a) The carbonyl absorption of the ester occurs at higher frequency, and only the carboxylic acid has the characteristic strong, broad O—H stretching absorption in 2400–3600 cm–1 region. (d) In N-methylpropanamide, the N-methyl group is a doublet at about d 3. N-Ethylacetamide has no doublet resonances. In N-methylpropanamide, the a-protons are a quartet near d 2.5. In N-ethylacetamide, the a- protons are a singlet at d 2. The NMR spectrum of N-methylpropanamide has no singlets. 21.9 (a) The first ester is more basic because its conjugate acid is stabilized not only by resonance interaction with the ester oxygen, but also by resonance interaction with the double bond; that is, the conjugate acid of the first ester has one more important resonance structure than the conjugate acid of the second. -
Metabolic-Hydroxy and Carboxy Functionalization of Alkyl Moieties in Drug Molecules: Prediction of Structure Influence and Pharmacologic Activity
molecules Review Metabolic-Hydroxy and Carboxy Functionalization of Alkyl Moieties in Drug Molecules: Prediction of Structure Influence and Pharmacologic Activity Babiker M. El-Haj 1,* and Samrein B.M. Ahmed 2 1 Department of Pharmaceutical Sciences, College of Pharmacy and Health Sciences, University of Science and Technology of Fujairah, Fufairah 00971, UAE 2 College of Medicine, Sharjah Institute for Medical Research, University of Sharjah, Sharjah 00971, UAE; [email protected] * Correspondence: [email protected] Received: 6 February 2020; Accepted: 7 April 2020; Published: 22 April 2020 Abstract: Alkyl moieties—open chain or cyclic, linear, or branched—are common in drug molecules. The hydrophobicity of alkyl moieties in drug molecules is modified by metabolic hydroxy functionalization via free-radical intermediates to give primary, secondary, or tertiary alcohols depending on the class of the substrate carbon. The hydroxymethyl groups resulting from the functionalization of methyl groups are mostly oxidized further to carboxyl groups to give carboxy metabolites. As observed from the surveyed cases in this review, hydroxy functionalization leads to loss, attenuation, or retention of pharmacologic activity with respect to the parent drug. On the other hand, carboxy functionalization leads to a loss of activity with the exception of only a few cases in which activity is retained. The exceptions are those groups in which the carboxy functionalization occurs at a position distant from a well-defined primary pharmacophore. Some hydroxy metabolites, which are equiactive with their parent drugs, have been developed into ester prodrugs while carboxy metabolites, which are equiactive to their parent drugs, have been developed into drugs as per se. -
Methyl Substitution Effects on the Proton Chemical Shifts in Benzene *
Methyl Substitution Effects on the Proton Chemical Shifts in Benzene * G. S. REDDY E. I. du Pont de Nemours & Company, Inc. Explosives Department, Eastern Laboratory, Gibbstown, New Jersey, U.S.A. (Z. Naturforschg. 21 a, 609—615 [1966] ; received 16 December 1965) Methyl substitution effects on aromatic and methyl proton chemical shifts in several mono-, di-, and trimethyl benzenes are studied. A new method for obtaining the changes in the ring proton chemical shifts from those of methyl proton shifts at the corresponding positions is used. The extra jr-electron densities in toluene are calculated using the already known relation between the jr-elec- tron densities and the proton shifts in aromatic systems. An inverse relationship is obtained between the ionization potentials and the total methyl effects on the chemical shifts in this series of com- pounds as one would expect. Dipole moment of toluene is calculated, and a reasonably good agree- ment is found between the experimentally observed and the calculated dipole moment. Several efforts have been made from time to Considerable work has also been done in estimat- time to study the substitution effects on chemical ing ir-electron densities from chemical shift meas- shifts and coupling constants. One of the earliest urements in unsaturated systems. This study in- attempts in this line are those of CAVANAUGH and volves extension of the substitution effects and also DAILEY 1 who tried to study the effect of multiple estimating jr-electron densities in methyl benzenes. methyl substitution in methane. They encountered Eight mono-, di-, and trimethyl substituted benzenes negative shifts contrary to expectations based on have been studied, and a new technique has been inductive and hyperconjugative effects of the methyl deployed to obtain the methyl substitution effects group which eventually was attributed to the an- on the chemical shifts of ring protons from proton isotropy effect of the added C — C bonds 2-7. -
Aldehydes and Ketones
12 Aldehydes and Ketones Ethanol from alcoholic beverages is first metabolized to acetaldehyde before being broken down further in the body. The reactivity of the carbonyl group of acetaldehyde allows it to bind to proteins in the body, the products of which lead to tissue damage and organ disease. Inset: A model of acetaldehyde. (Novastock/ Stock Connection/Glow Images) KEY QUESTIONS 12.1 What Are Aldehydes and Ketones? 12.8 What Is Keto–Enol Tautomerism? 12.2 How Are Aldehydes and Ketones Named? 12.9 How Are Aldehydes and Ketones Oxidized? 12.3 What Are the Physical Properties of Aldehydes 12.10 How Are Aldehydes and Ketones Reduced? and Ketones? 12.4 What Is the Most Common Reaction Theme of HOW TO Aldehydes and Ketones? 12.1 How to Predict the Product of a Grignard Reaction 12.5 What Are Grignard Reagents, and How Do They 12.2 How to Determine the Reactants Used to React with Aldehydes and Ketones? Synthesize a Hemiacetal or Acetal 12.6 What Are Hemiacetals and Acetals? 12.7 How Do Aldehydes and Ketones React with CHEMICAL CONNECTIONS Ammonia and Amines? 12A A Green Synthesis of Adipic Acid IN THIS AND several of the following chapters, we study the physical and chemical properties of compounds containing the carbonyl group, C O. Because this group is the functional group of aldehydes, ketones, and carboxylic acids and their derivatives, it is one of the most important functional groups in organic chemistry and in the chemistry of biological systems. The chemical properties of the carbonyl group are straightforward, and an understanding of its characteristic reaction themes leads very quickly to an understanding of a wide variety of organic reactions. -
Methyl- 5/7- Substituted -2- (3,4-Dichloro) Benzoyl-4H-L,4- Benzothiazines As Bifunctional Anticancer Agents
Synthesis and Spectral studies of Nitrosourea derivatives of 3- Methyl- 5/7- Substituted -2- (3,4-dichloro) benzoyl-4H-l,4- Benzothiazines as Bifunctional Anticancer Agents. Rajni Gupta* and Vandana Gupta Department of Chemistry, University ofRajasthcm, Jaipur-302004, India Email: [email protected] Abstract: The synthesis of of 3-methyl-5/7- substituted-4- (N-propyl-N-nitrosoamido)- 2- (3,4-dichloro benzoyl) -4H- 1,4-Benzothiazines by the isocyanation and successive nitrosation of 3-methyl -5/7- substituted- 2- (3,4- dichlorobenzoyl) -4H-l,4-Benzothiazines has been reported. The synthesized compounds have been characterized by their elemental analyses and spectral characteristics. Introduction: Analogous to phenothiazines, benzothiazines possesss a wide spectrum of biological activities'. Their several derivatives are in clinical use2'7. They exhibit significant anticancer activities, which are assigned due to their interaction with DMA by complexation. Nitrosourea derivatives constitute an important class of anticancer agents and its several derivatives like MNNG, CNU, MNU, GANU, and CDL-7 etc. are clinically significant. They interact with DNA via alkylation 8"9. However their clinical use is limited because of cumulative and delayed side effects exerted by these compounds. Bone marrow toxicity being dose limiting, therefore it is worthwhile to develop a new series of nitrosoureas with minimum toxicity and side effects. 4H-1, 4- Benzothiazines are much less toxic and therefore it is anticipated that their nitrosourea derivatives will be potent anticancer agents with minimum toxicity, side effects etc. In 3-methyl-5/7- substituted-4- (N-propyl-N-nitrosoamido)- 2- (3,4-dichloro benzoyl) -4H-1.4- Benzothiazines heterocyclic nitrogen with a side chain at 4-position constitutes N-nitrosourea linkage and possess both 1,4-benzothiazines nucleus and a nitrosourea moiety . -
Fundamental Studies of Early Transition Metal-Ligand Multiple Bonds: Structure, Electronics, and Catalysis
Fundamental Studies of Early Transition Metal-Ligand Multiple Bonds: Structure, Electronics, and Catalysis Thesis by Ian Albert Tonks In Partial Fulfillment of the Requirements for the Degree of Doctor of Philosophy CALIFORNIA INSTITUTE OF TECHNOLOGY Pasadena, California 2012 Defended December 6th 2011 ii 2012 Ian A Tonks All Rights Reserved iii ACKNOWLEDGEMENTS I am extremely fortunate to have been surrounded by enthusiastic, dedicated, and caring mentors, colleagues, and friends throughout my academic career. A Ph.D. thesis is by no means a singular achievement; I wish to extend my wholehearted thanks to everyone who has made this journey possible. First and foremost, I must thank my Ph.D. advisor, Prof. John Bercaw. I think more so than anything else, I respect John for his character, sense of fairness, and integrity. I also benefitted greatly from John’s laissez-faire approach to guiding our research group; I’ve always learned best when left alone to screw things up, although John also has an uncanny ability for sensing when I need direction or for something to work properly on the high-vac line. John also introduced me to hiking and climbing in the Eastern Sierras and Owens Valley, which remain amongst my favorite places on Earth. Thanks for always being willing to go to the Pizza Factory in Lone Pine before and after all the group hikes! While I never worked on any of the BP projects that were spearheaded by our co-PI Dr. Jay Labinger, I must also thank Jay for coming to all of my group meetings, teaching me an incredible amount while I was TAing Ch154, and for always being willing to talk chemistry and answer tough questions. -
Proton Nmr Spectroscopy
1H NMR Spectroscopy (#1c) The technique of 1H NMR spectroscopy is central to organic chemistry and other fields involving analysis of organic chemicals, such as forensics and environmental science. It is based on the same principle as magnetic resonance imaging (MRI). This laboratory exercise reviews the principles of interpreting 1H NMR spectra that you should be learning right now in Chemistry 302. There are four questions you should ask when you are trying to interpret an NMR spectrum. Each of these will be discussed in detail. The Four Questions to Ask While Interpreting Spectra 1. How many different environments are there? The number of peaks or resonances (signals) in the spectrum indicates the number of nonequivalent protons in a molecule. Chemically equivalent protons (magnetically equivalent protons) give the same signal in the NMR whereas nonequivalent protons give different signals. 1 For example, the compounds CH3CH3 and BrCH2CH2Br all have one peak in their H NMR spectra because all of the protons in each molecule are equivalent. The compound below, 1,2- dibromo-2-methylpropane, has two peaks: one at 1.87 ppm (the equivalent CH3’s) and the other at 3.86 ppm (the CH2). 1.87 1.87 ppm CH 3 3.86 ppm Br Br CH3 1.87 ppm 3.86 10 9 8 7 6 5 4 3 2 1 0 2. How many 1H are in each environment? The relative intensities of the signals indicate the numbers of protons that are responsible for individual signals. The area under each peak is measured in the form of an integral line. -
The Chemistry of Alkynes
14_BRCLoudon_pgs4-2.qxd 11/26/08 9:04 AM Page 644 14 14 The Chemistry of Alkynes An alkyne is a hydrocarbon containing a carbon–carbon triple bond; the simplest member of this family is acetylene, H C'C H. The chemistry of the carbon–carbon triple bond is similar in many respects toL that ofL the carbon–carbon double bond; indeed, alkynes and alkenes undergo many of the same addition reactions. Alkynes also have some unique chem- istry, most of it associated with the bond between hydrogen and the triply bonded carbon, the 'C H bond. L 14.1 NOMENCLATURE OF ALKYNES In common nomenclature, simple alkynes are named as derivatives of the parent compound acetylene: H3CCC' H L L methylacetylene H3CCC' CH3 dimethylacetyleneL L CH3CH2 CC' CH3 ethylmethylacetyleneL L Certain compounds are named as derivatives of the propargyl group, HC'C CH2 , in the common system. The propargyl group is the triple-bond analog of the allyl group.L L HC' C CH2 Cl H2CA CH CH2 Cl L L LL propargyl chloride allyl chloride 644 14_BRCLoudon_pgs4-2.qxd 11/26/08 9:04 AM Page 645 14.1 NOMENCLATURE OF ALKYNES 645 We might expect the substitutive nomenclature of alkynes to be much like that of alkenes, and it is. The suffix ane in the name of the corresponding alkane is replaced by the suffix yne, and the triple bond is given the lowest possible number. H3CCC' H CH3CH2CH2CH2 CC' CH3 H3C CH2 C ' CH L L L L L L L propyne 2-heptyne 1-butyne H3C CH C ' C CH3 HC' C CH2 CH2 C' C CH3 L L L L 1,5-heptadiyneLL L "CH3 4-methyl-2-pentyne Substituent groups that contain a triple bond (called alkynyl groups) are named by replac- ing the final e in the name of the corresponding alkyne with the suffix yl. -
Chemical Bonding Valence Electrons Are the Outer Shell Electrons of an Atom
Chapter 8 Chemical Bonding Valence electrons are the outer shell electrons of an atom. The valence electrons are the electrons that participate in chemical bonding. Group e- configuration # of valence e- 1 ns1 1 2 ns2 2 13 ns2np1 3 14 ns2np2 4 15 ns2np3 5 16 ns2np4 6 17 ns2np5 7 Lewis Dot Symbols for the Representative Elements & Noble Gases Lewis dot symbol consists of the symbol of the element and one dot for each valence electron in an atom of each element The Ionic Bond Ionic bond = the electrostatic force that holds ions Li + F Li+ F - together in an 2 1 2 2 5 [He]2[Ne]2 2 6 ionic compound 1s 2s1s 2s 2p 1s1s 2s 2p Li Li+ + e- e- + F F - Lithium fluoride, LiF Li+ + F - Li+ F - Ionic Bonds 3Mg (s) + N2 (g) → Mg3N2 (s) .. .. 2 3 3 Mg2 N 3Mg 2: N : (Mg3N2 ) . .. Electrostatic (Lattice) Energy Lattice energy (E) is the energy required to completely separate one mole of a solid ionic compound into gaseous ions. Coulomb’s Law: the potential energy between 2 ions is directly proportional to the product of their charges and inversely proportional to the distance of separation between them Q+ is the charge on the cation Q Q E = k + - Q is the charge on the anion r - r is the distance between the ions cmpd lattice energy MgF2 2957 Q= +2,-1 Lattice energy (E) increases MgO 3938 Q= +2,-2 as Q increases and/or as r decreases. LiF 1036 r F- < r Cl- LiCl 853 Born-Haber Cycle for Determining Lattice Energy The Born-Haber cycle relates lattice energies of ionic compounds to ionization energies, electron affinities, and other atomic & molecular properties o o o o o o DHoverall = DH1 + DH2 + DH3 + DH4 + DH5 Born-Haber cycle for lithium fluoride 1. -
Basic Concepts of Chemical Bonding
Basic Concepts of Chemical Bonding Cover 8.1 to 8.7 EXCEPT 1. Omit Energetics of Ionic Bond Formation Omit Born-Haber Cycle 2. Omit Dipole Moments ELEMENTS & COMPOUNDS • Why do elements react to form compounds ? • What are the forces that hold atoms together in molecules ? and ions in ionic compounds ? Electron configuration predict reactivity Element Electron configurations Mg (12e) 1S 2 2S 2 2P 6 3S 2 Reactive Mg 2+ (10e) [Ne] Stable Cl(17e) 1S 2 2S 2 2P 6 3S 2 3P 5 Reactive Cl - (18e) [Ar] Stable CHEMICAL BONDSBONDS attractive force holding atoms together Single Bond : involves an electron pair e.g. H 2 Double Bond : involves two electron pairs e.g. O 2 Triple Bond : involves three electron pairs e.g. N 2 TYPES OF CHEMICAL BONDSBONDS Ionic Polar Covalent Two Extremes Covalent The Two Extremes IONIC BOND results from the transfer of electrons from a metal to a nonmetal. COVALENT BOND results from the sharing of electrons between the atoms. Usually found between nonmetals. The POLAR COVALENT bond is In-between • the IONIC BOND [ transfer of electrons ] and • the COVALENT BOND [ shared electrons] The pair of electrons in a polar covalent bond are not shared equally . DISCRIPTION OF ELECTRONS 1. How Many Electrons ? 2. Electron Configuration 3. Orbital Diagram 4. Quantum Numbers 5. LEWISLEWIS SYMBOLSSYMBOLS LEWISLEWIS SYMBOLSSYMBOLS 1. Electrons are represented as DOTS 2. Only VALENCE electrons are used Atomic Hydrogen is H • Atomic Lithium is Li • Atomic Sodium is Na • All of Group 1 has only one dot The Octet Rule Atoms gain, lose, or share electrons until they are surrounded by 8 valence electrons (s2 p6 ) All noble gases [EXCEPT HE] have s2 p6 configuration. -
Functional Groups Kimberly Hatch Harrison
Functional Groups Kimberly Hatch Harrison Functional groups are those small chemical species you see hanging off the outside of a molecule. Just a handful of these functional groups de- termine most of the chemical reactions that happen between biological molecules. If you memorize the chemical behavior of these functional groups, you’ll be able to predict what kinds of reactions biological molecules can do. You can’t open a lock with a screwdriver–the shape of a screwdriver is quite different from a key, which means it has a dif- ferent function. "Form determines function" is something you’ll hear over and over in biochemistry, and that’s because it’s true. The over- all 3-dimensional shape of a molecule allows it to fit into another molecule, like how a key fits into a lock. But not all keys are the same. You have to look closely at the teeth of a key to see which lock it can open. Similarly, you need to look at the details of the outside of a molecule to understand what kinds of chemical interactions it can do with other molecules. How the carbon skeleton of a biological molecule is folded up de- termines its general 3D shape. So that’s one level of understanding– this molecule looks like a key, this one looks like a lock, etc. But then you must look closer, at the surface details, to understand exactly which key, exactly what kind of lock. When you examine the outside of a biological molecule, you can identify which functional groups are standing out on its surface, like little flags.