Extraction, Isolation, Purification and Sructure
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Rubiaceae) in Africa and Madagascar
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Springer - Publisher Connector Plant Syst Evol (2010) 285:51–64 DOI 10.1007/s00606-009-0255-8 ORIGINAL ARTICLE Adaptive radiation in Coffea subgenus Coffea L. (Rubiaceae) in Africa and Madagascar Franc¸ois Anthony • Leandro E. C. Diniz • Marie-Christine Combes • Philippe Lashermes Received: 31 July 2009 / Accepted: 28 December 2009 / Published online: 5 March 2010 Ó The Author(s) 2010. This article is published with open access at Springerlink.com Abstract Phylogeographic analysis of the Coffea subge- biogeographic differentiation of coffee species, but they nus Coffea was performed using data on plastid DNA were not congruent with morphological and biochemical sequences and interpreted in relation to biogeographic data classifications, or with the capacity to grow in specific on African rain forest flora. Parsimony and Bayesian analyses environments. Examples of convergent evolution in the of trnL-F, trnT-L and atpB-rbcL intergenic spacers from 24 main clades are given using characters of leaf size, caffeine African species revealed two main clades in the Coffea content and reproductive mode. subgenus Coffea whose distribution overlaps in west equa- torial Africa. Comparison of trnL-F sequences obtained Keywords Africa Á Biogeography Á Coffea Á Evolution Á from GenBank for 45 Coffea species from Cameroon, Phylogeny Á Plastid sequences Á Rubiaceae Madagascar, Grande Comore and the Mascarenes revealed low divergence between African and Madagascan species, suggesting a rapid and radial mode of speciation. A chro- Introduction nological history of the dispersal of the Coffea subgenus Coffea from its centre of origin in Lower Guinea is pro- Coffeeae tribe belongs to the Ixoroideae monophyletic posed. -
Re-Issue 2018
SEED LEAFLETS Re-issue 2018 Environment , Forest and Climate Change Commission Õ¢^]ŃΎÜΎÕ0Ύ`+pΎ ¼ČΎ¥@ SEED LEAFLET No. 2 March 2000 Re-issue 2018 Acacia auriculiformis Cunn. ex Benth. Taxonomy and nomenclature Botanical description Family: Fabaceae (Mimosoideae) A large shrub or medium-sized, evergreen tree, usu- Synonyms: Acacia auriculaeformis A. Cunn. ex Benth., ally 8-20 m tall, on good sites up to 35 m. Bark grey Racosperma auriculiforme (A. Cunn. ex Benth.) Pedley. or brown, longitudinally fissured. Leaves (phyllodes) Vernacular/common names: Northern black wattle 8-20 cm long, glabrous and curved, with 3 prominent (Australian trade name); coast wattle, ear pod wattle. nerves (four in A. mangium). Flowers bisexual, creamy yellow, scented, in up to 8.5 cm long spikes. Distribution and habitat Native to Australia, Papua New Guinea and Indo- nesia in hot humid and sub-humid lowlands with mean annual rainfall of 800-2500 mm and mean an- nual temperature of 20-30°C. Often found on river banks and in coastal areas. It is cultivated widely in the tropics within an altitude range of 0-500 (-1000) masl, and even though frost does not occur in its natural range, it tolerates light frost. It is exceptionally tolerant to soil type in regard to fertility, salinity and pH. It can grow on acid mine spoils with pH 3 and on alkaline beach sands with pH 8-9. It does not tolerate shade or strong winds. Isoenzyme analysis has revealed a marked genetic variation with 3 distinct groups corresponding to the geographic distribution in Papua New Guinea, Queensland and Northern Territory. -
SABONET Report No 18
ii Quick Guide This book is divided into two sections: the first part provides descriptions of some common trees and shrubs of Botswana, and the second is the complete checklist. The scientific names of the families, genera, and species are arranged alphabetically. Vernacular names are also arranged alphabetically, starting with Setswana and followed by English. Setswana names are separated by a semi-colon from English names. A glossary at the end of the book defines botanical terms used in the text. Species that are listed in the Red Data List for Botswana are indicated by an ® preceding the name. The letters N, SW, and SE indicate the distribution of the species within Botswana according to the Flora zambesiaca geographical regions. Flora zambesiaca regions used in the checklist. Administrative District FZ geographical region Central District SE & N Chobe District N Ghanzi District SW Kgalagadi District SW Kgatleng District SE Kweneng District SW & SE Ngamiland District N North East District N South East District SE Southern District SW & SE N CHOBE DISTRICT NGAMILAND DISTRICT ZIMBABWE NAMIBIA NORTH EAST DISTRICT CENTRAL DISTRICT GHANZI DISTRICT KWENENG DISTRICT KGATLENG KGALAGADI DISTRICT DISTRICT SOUTHERN SOUTH EAST DISTRICT DISTRICT SOUTH AFRICA 0 Kilometres 400 i ii Trees of Botswana: names and distribution Moffat P. Setshogo & Fanie Venter iii Recommended citation format SETSHOGO, M.P. & VENTER, F. 2003. Trees of Botswana: names and distribution. Southern African Botanical Diversity Network Report No. 18. Pretoria. Produced by University of Botswana Herbarium Private Bag UB00704 Gaborone Tel: (267) 355 2602 Fax: (267) 318 5097 E-mail: [email protected] Published by Southern African Botanical Diversity Network (SABONET), c/o National Botanical Institute, Private Bag X101, 0001 Pretoria and University of Botswana Herbarium, Private Bag UB00704, Gaborone. -
Phylogeny of Euclinia and Allied Genera of Gardenieae (Rubiaceae), and Description of Melanoxerus, an Endemic Genus of Madagascar
TAXON 63 (4) • August 2014: 819–830 Kainulainen & Bremer • Systematics of Euclinia Phylogeny of Euclinia and allied genera of Gardenieae (Rubiaceae), and description of Melanoxerus, an endemic genus of Madagascar Kent Kainulainen1,2 & Birgitta Bremer1,2 1 The Bergius Foundation at the Royal Swedish Academy of Sciences 2 Department of Ecology, Environment and Plant Sciences, Stockholm University, 106 91 Stockholm, Sweden Author for correspondence: Kent Kainulainen, [email protected] DOI http://dx.doi.org/10.12705/634.2 Abstract We performed molecular phylogenetic analyses of the Randia clade of the tribe Gardenieae using both plastid and nuclear DNA data. In the phylogenetic hypotheses presented, the African genera Calochone, Euclinia, Macrosphyra, Oligo- codon, Pleiocoryne, and Preussiodora are resolved as a monophyletic group. Support is also found for a clade of the Neotropical genera Casasia, Randia, Rosenbergiodendron, Sphinctanthus, and Tocoyena. This Neotropical clade is resolved as sister group to the African clade in analyses of combined plastid and nuclear data. The genus Euclinia appears polyphyletic. The species described from Madagascar represent an independent lineage, the position of which is moreover found to be incongruent between datasets. Plastid and ribosomal DNA data support a sistergroup relationship to the mainland African clade, whereas the lowcopy nuclear gene Xdh supports a closer relationship to the Neotropical genera. The phylogenetic reconstructions also indicate that Casasia and Randia are not monophyletic as presently circumscribed. A taxonomic proposal is made for the recognition of the Malagasy taxon at generic level as Melanoxerus. Keywords Euclinia; Gardenieae; Ixoroideae; Madagascar; molecular phylogenetics; Randia; Rubiaceae; systematics; Xdh INTRODUCTION bilocular [Randia] or unilocular [Gardenia]), and that both genera were “polymorphic”. -
Diversity and Structure of an Arid Woodland in Southwest Angola, with Comparison to the Wider Miombo Ecoregion
diversity Article Diversity and Structure of an Arid Woodland in Southwest Angola, with Comparison to the Wider Miombo Ecoregion John L. Godlee 1,* , Francisco Maiato Gonçalves 2 , José João Tchamba 2 , Antonio Valter Chisingui 2 , Jonathan Ilunga Muledi 3, Mylor Ngoy Shutcha 3 , Casey M. Ryan 1 , Thom K. Brade 1 and Kyle G. Dexter 1,4 1 School of GeoSciences, University of Edinburgh, Edinburgh EH9 3FF, UK 2 Herbarium of Lubango, ISCED Huíla, Sarmento Rodrigues Str. No. 2, CP. 230, Lubango, Angola 3 Ecologie, Restauration Ecologique et Paysage, Faculté des Sciences Agronomique, Université de Lubumbashi, Route Kasapa BP 1825, Congo 4 Royal Botanic Garden Edinburgh, Edinburgh EH3 5LR, UK * Correspondence: [email protected] Received: 16 March 2020; Accepted: 31 March 2020; Published: 3 April 2020 Abstract: Seasonally dry woodlands are the dominant land cover across southern Africa. They are biodiverse, structurally complex, and important for ecosystem service provision. Species composition and structure vary across the region producing a diverse array of woodland types. The woodlands of the Huíla plateau in southwest Angola represent the extreme southwestern extent of the miombo ecoregion and are markedly drier than other woodlands within this ecoregion. They remain understudied, however, compared to woodlands further east in the miombo ecoregion. We aimed to elucidate further the tree diversity found within southwestern Angolan woodlands by conducting a plot-based study in Bicuar National Park, comparing tree species composition and woodland structure with similar plots in Tanzania, Mozambique, and the Democratic Republic of Congo. We found Bicuar National Park had comparatively low tree species diversity, but contained 27 tree species not found in other plots. -
Bioprospecting the Flora of Southern Africa: Optimising Plant Selections
Bioprospecting the flora of southern Africa: optimising plant selections Dissertation for Master of Science Errol Douwes 2005 Submitted in fulfilment of the requirements for the degree of Master of Science in the School of Biological and Conservation Sciences at the University of KwaZulu-Natal Pietermaritzburg, South Africa ii Preface The work described in this dissertation was carried out at the Ethnobotany Unit, South African National Biodiversity Institute, Durban and at the School of Biological and Conservation Sciences, University of KwaZulu-Natal, Pietermaritzburg from January 2004 to November 2005 under the supervision of Professor TJ. Edwards (School of Biological and Conservation Sciences, University of KwaZulu-Natal, Pietermaritzburg) and Dr N. R. Crouch (Ethnobotany Unit, South African National Biodiversity Institute, Durban). These studies, submitted for the degree of Master of Science in the School of Biological and Conservation Sciences, University of KwaZulu-Natal, Pietermaritzburg, represent the original work of the author and have not been submitted in any form to another university. Use of the work of others has been duly acknowledged in the text. We certify that the above statement is correct Novem:RE. Douwes Professor T.J. Edwards /JIo-~rA ..............................~ ...~ Dr N.R. Crouch iii Acknowledgements Sincere thanks are due to my supervisors Prof. Trevor Edwards and Dr Neil Crouch for their guidance and enthusiasm in helping me undertake this project. Dr Neil Crouch is thanked for financial support provided by way of SANSI (South African National Siodiversity Institute) and the NDDP (Novel Drug Development Platform). Prof. Trevor Edwards and Prof. Dulcie Mulholland are thanked for financial support provided by way of NRF (National Research Foundation) grant-holder bursaries. -
Distance Dispersal and Species Radiation in the Western Indian Ocean
Journal of Biogeography (J. Biogeogr.) (2017) 44, 1966–1979 ORIGINAL Island hopping, long-distance dispersal ARTICLE and species radiation in the Western Indian Ocean: historical biogeography of the Coffeeae alliance (Rubiaceae) Kent Kainulainen1,3,* , Sylvain G. Razafimandimbison2,3 , Niklas Wikstrom€ 3 and Birgitta Bremer3 1University of Michigan Herbarium, ABSTRACT Department of Ecology and Evolutionary Aim The Western Indian Ocean region (WIOR) is home to a very diverse and Biology, Ann Arbor, MI 48108, USA, 2 largely unique flora that has mainly originated via long-distance dispersals. The Department of Botany, Swedish Museum of Natural History, SE-10405 Stockholm, aim of this study is to gain insight into the origins of the WIOR biodiversity Sweden, 3The Bergius Foundation, The Royal and to understand the dynamics of colonization events between the islands. Swedish Academy of Sciences, Department of We investigate spatial and temporal hypotheses of the routes of dispersal, and Ecology, Environment and Plant Sciences, compare the dispersal patterns of plants of the Coffeeae alliance (Rubiaceae) Stockholm University, SE-106 91 Stockholm, and their dispersers. Rubiaceae is the second most species-rich plant family in Sweden Madagascar, and includes many endemic genera. The neighbouring archipela- gos of the Comoros, Mascarenes and Seychelles also harbour several endemic Rubiaceae. Location The islands of the Western Indian Ocean. Methods Phylogenetic relationships and divergence times were reconstructed from plastid DNA data of an ingroup sample of 340 species, using Bayesian inference. Ancestral areas and range evolution history were inferred by a maxi- mum likelihood method that takes topological uncertainty into account. Results At least 15 arrivals to Madagascar were inferred, the majority of which have taken place within the last 10 Myr. -
FITOQUÍMICA DE Borreria Verticillata (L.) G
UNIVERSIDADE FEDERAL DA PARAÍBA CENTRO DE CIÊNCIAS DA SAÚDE PROGRAMA DE PÓS-GRADUAÇÃO EM PRODUTOS NATURAIS E SINTÉTICOS BIOATIVOS FÁBIO HENRIQUE TENÓRIO DE SOUZA FITOQUÍMICA DE Borreria verticillata (L.) G. MEY., Borreria ocymoides (BURM. F.) DC. E Richardia brasiliensis GOMES (RUBIACEAE) João Pessoa – PB 2013 FÁBIO HENRIQUE TENÓRIO DE SOUZA FITOQUÍMICA DE Borreria verticillata (L.) G. MEY., Borreria ocymoides (BURM. F.) DC. E Richardia brasiliensis GOMES (RUBIACEAE) Tese apresentada ao Programa de Pós- Graduação em Produtos Naturais e Sintéticos Bioativos do Centro de Ciências da Saúde da Universidade Federal da Paraíba, em cumprimento às exigências para obtenção do título de Doutor em Produtos Naturais e Sintéticos Bioativos, Área de Concentração Farmacoquímica. ORIENTADORA: Profa. Dra. Celidarque da Silva Dias João Pessoa – PB 2013 S729f Souza, Fábio Henrique Tenório de. Fitoquímica de Borreria verticillata (L.) G. Mey., Borreria ocymoides (Burm. f.) DC. e Richardia brasiliensis Gomes (Rubiaceae) / Fábio Henrique Tenório de Souza.- João Pessoa, 2013. 202f. : il. Orientadora: Celidarque da Silva Dias Tese (Doutorado) – UFPB/CCS 1. Produtos naturais. 2. Farmacoquímica. 3. Rubiaceae. 4.Borreria verticillata. 5. Borreria ocymoides. 6. Richardia brasiliensis. 7. Fitoquímica. UFPB/BC CDU: 547.9(043) FÁBIO HENRIQUE TENÓRIO DE SOUZA FITOQUÍMICA DE Borreria verticillata (L.) G. MEY., Borreria ocymoides (BURM. F.) DC. E Richardia brasiliensis GOMES (RUBIACEAE) Tese defendida em 27 de Setembro de 2013 COMISSÃO EXAMINADORA ____________________________________ Profa. Dra. Celidarque da Silva Dias PhD em Produtos Naturais e Sintéticos Bioativos (Farmacoquímica) Departamento de Ciências Farmacêuticas – Centro de Ciências da Saúde Universidade Federal da Paraíba – Campus I (Orientadora) _______________________________ _______________________________ Profa. Dra. Liana Clébia de Morais Pordeus Profa. -
Savanna Fire and the Origins of the “Underground Forests” of Africa
SAVANNA FIRE AND THE ORIGINS OF THE “UNDERGROUND FORESTS” OF AFRICA Olivier Maurin1, *, T. Jonathan Davies1, 2, *, John E. Burrows3, 4, Barnabas H. Daru1, Kowiyou Yessoufou1, 5, A. Muthama Muasya6, Michelle van der Bank1 and William J. Bond6, 7 1African Centre for DNA Barcoding, Department of Botany & Plant Biotechnology, University of Johannesburg, PO Box 524 Auckland Park 2006, Johannesburg, Gauteng, South Africa; 2Department of Biology, McGill University, 1205 ave Docteur Penfield, Montreal, QC H3A 0G4, Quebec, Canada; 3Buffelskloof Herbarium, P.O. Box 710, Lydenburg, 1120, South Africa; 4Department of Plant Sciences, University of Pretoria, Private Bag X20 Hatfield 0028, Pretoria, South Africa; 5Department of Environmental Sciences, University of South Africa, Florida campus, Florida 1710, Gauteng, South Africa; 6Department of Biological Sciences and 7South African Environmental Observation Network, University of Cape Town, Rondebosch, 7701, Western Cape, South Africa *These authors contributed equally to the study Author for correspondence: T. Jonathan Davies Tel: +1 514 398 8885 Email: [email protected] Manuscript information: 5272 words (Introduction = 1242 words, Materials and Methods = 1578 words, Results = 548 words, Discussion = 1627 words, Conclusion = 205 words | 6 figures (5 color figures) | 2 Tables | 2 supporting information 1 SUMMARY 1. The origin of fire-adapted lineages is a long-standing question in ecology. Although phylogeny can provide a significant contribution to the ongoing debate, its use has been precluded by the lack of comprehensive DNA data. Here we focus on the ‘underground trees’ (= geoxyles) of southern Africa, one of the most distinctive growth forms characteristic of fire-prone savannas. 2. We placed geoxyles within the most comprehensive dated phylogeny for the regional flora comprising over 1400 woody species. -
242 Genus Deudorix Hewitson, 1863
AFROTROPICAL BUTTERFLIES. MARK C. WILLIAMS. http://www.lepsocafrica.org/?p=publications&s=atb Updated 15 August 2021 Genus Deudorix Hewitson, [1863] Playboys Illustrations of diurnal lepidoptera. Lycaenidae 1: [i-viii], [1-228]; 2: 1-95; Supplement: 1-48. London. = Virachola Moore, [1881]. In: Moore, [1880-2]. The lepidoptera of Ceylon 1: 104 (190 pp.). London. Type-species: Deudorix perse Hewitson, by original designation [extralimital]. The genus Deudorix belongs to the Family Lycaenidae Leach, 1815; Subfamily Theclinae Swainson, 1831; Tribe Deudorigini Doherty, 1886. The other genera in the Tribe Deudorigini in the Afrotropical Region are Hypomyrina, Paradeudorix, Pilodeudorix and Capys. Deudorix (Playboys) is an Old World genus with 23 Afrotropical species. Revision of the Afrotropical taxa by Libert, 2004c. antalus species group antalus sub-group antalus, livia, ungemachi suk sub-group suk, vansoni, ecaudata batikeli species group batikeli sub-group batikeli, lorisona, dariaves, vansomereni, diopolis, edwardsi, ufipa, diocles, kayonza dinochares sub-group dinochares, dinomenes galathea sub-group galathea, odana, caliginosa, nicephora renidens sub-group renidens Taxon of indeterminate status batikelides 1 *Deudorix antalus (Hopffer, 1855)# Brown Playboy Male (left) and female (right) Brown Playboy (Deudorix antalus). Images courtesy Steve Woodhall. Dipsas antalus Hopffer, 1855. Berichte über die zur Bekanntmachung geeigneten Verhandlungen der Königl. Preuss. Akademie der Wissenschaften zu Berlin 1855: 641 (639-643). Deudorix antalus (Hopffer, 1855). Hewitson, 1863 comb. nov. Deudorix antalus (Hopffer, 1855). Trimen & Bowker, 1887b. Deudorix antalus Hopffer. Swanepoel, 1953a. Deudorix antalus (Hopffer, 1855). Dickson & Kroon, 1978. Deudorix (Virachola) antalus (Hopffer, 1855). Pringle et al., 1994: 166. Virachola antalus Hopffer, 1855. d’Abrera, 2009: 771. Deudorix antalus (Hopffer, 1855). -
An Annotated Checklist of the Vascular Flora of South and North Nandi Forests, Kenya
A peer-reviewed open-access journal PhytoKeys 155: 87–139An (2020) annotated checklist of the vascular flora of Nandi Forests, Kenya 87 doi: 10.3897/phytokeys.155.51966 CHECKLIST http://phytokeys.pensoft.net Launched to accelerate biodiversity research An annotated checklist of the vascular flora of South and North Nandi Forests, Kenya David Kimutai Melly1,2,3,4, Solomon Kipkoech1,2,3,4, Benjamin Watuma Muema1,2,3,4, Peris Kamau4, Itambo Malombe4, Guangwan Hu1,2,3, Qing-Feng Wang1,2,3 1 CAS Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan 430074, Hubei, China 2 University of Chinese Academy of Sciences. Bei- jing 100049, China 3 Sino-Africa Joint Research Center, Chinese Academy of Sciences, Wuhan 430074, Hu- bei, China 4 East African Herbarium, National Museums of Kenya, P.O. Box 45166 00100, Nairobi, Kenya Corresponding author: Guangwan Hu ([email protected]) Academic editor: Ricarda Riina | Received 13 March 2020 | Accepted 19 June 2020 | Published 7 August 2020 Citation: Melly DK, Kipkoech S, Muema BW, Kamau P, Malombe I, Hu G, Wang Q-F (2020) An annotated checklist of the vascular flora of South and North Nandi Forests, Kenya. PhytoKeys 155: 87–139. https://doi.org/10.3897/ phytokeys.155.51966 Abstract We compiled a checklist of the flora of South and North Nandi forests based on literature, online data- bases, herbarium collections and floristic field surveys. A combination of general walk-over surveys and plotless landscape sampling for plant collection and sight observation was used. We recorded 628 plant species representing 118 families and 392 genera, which almost double the latest results of the previous most recent survey. -
Genus Deudorix Hewitson, [1863]
16th edition (2017) Genus Deudorix Hewitson, [1863] Illustrations of diurnal lepidoptera. Lycaenidae 1: [i-viii], [1-228]; 2: 1-95; Supplement: 1-48. London. = Virachola Moore, [1881]. In: Moore, [1880-2]. The lepidoptera of Ceylon 1: 104 (190 pp.). London. Type-species: Deudorix perse Hewitson, by original designation [extralimital]. The genus Deudorix belongs to the Family Lycaenidae Leach, 1815; Subfamily Theclinae Swainson, 1831; Tribe Deudoricini Doherty, 1886. The other genera in the Tribe Deudoricini in the Afrotropical Region are Hypomyrina, Paradeudorix, Pilodeudorix and Capys. Deudorix (Playboys) is an Old World genus with 23 Afrotropical species. Revision of the Afrotropical taxa by Libert, 2004c. *Deudorix antalus (Hopffer, 1855)# Brown Playboy Male (left) and female (right) Brown Playboy (Deudorix antalus). Images courtesy Steve Woodhall. Dipsas antalus Hopffer, 1855. Berichte über die zur Bekanntmachung geeigneten Verhandlungen der Königl. Preuss. Akademie der Wissenschaften zu Berlin 1855: 641 (639-643). Deudorix antalus (Hopffer, 1855). Hewitson, 1863 comb. nov. Deudorix antalus (Hopffer, 1855). Trimen & Bowker, 1887b. Deudorix antalus Hopffer. Swanepoel, 1953a. Deudorix antalus (Hopffer, 1855). Dickson & Kroon, 1978. Deudorix (Virachola) antalus (Hopffer, 1855). Pringle et al., 1994: 166. Virachola antalus Hopffer, 1855. d’Abrera, 2009: 771. Deudorix antalus (Hopffer, 1855). Collins et al., 2014. 1 Deudorix antalus. Male (Wingspan 28 mm). Left – upperside; right – underside. Thabazimbi, Limpopo Province, South Africa. 26 May 2012. M. Williams. Images M.C. Williams ex Williams Collection. Deudorix antalus. Female (Wingspan 32 mm). Left – upperside; right – underside. La Lucia, Durban, KwaZulu-Natal, South Africa. March, 2000. M. Williams. Images M.C. Williams ex Williams Collection. Alternative common name: Common Brown Playboy.