Molecular Phylogeny of Blaberidae (Dictyoptera, Blattodea), with Implications for Taxonomy and Evolutionary Scenarios
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
Long Rdna Amplicon Sequencing of Insect-Infecting Nephridiophagids
www.nature.com/scientificreports OPEN Long rDNA amplicon sequencing of insect‑infecting nephridiophagids reveals their afliation to the Chytridiomycota and a potential to switch between hosts Jürgen F. H. Strassert 1*, Christian Wurzbacher 2, Vincent Hervé 3, Taraha Antany1, Andreas Brune 3 & Renate Radek 1* Nephridiophagids are unicellular eukaryotes that parasitize the Malpighian tubules of numerous insects. Their life cycle comprises multinucleate vegetative plasmodia that divide into oligonucleate and uninucleate cells, and sporogonial plasmodia that form uninucleate spores. Nephridiophagids are poor in morphological characteristics, and although they have been tentatively identifed as early‑branching fungi based on the SSU rRNA gene sequences of three species, their exact position within the fungal tree of live remained unclear. In this study, we describe two new species of nephridiophagids (Nephridiophaga postici and Nephridiophaga javanicae) from cockroaches. Using long‑read sequencing of the nearly complete rDNA operon of numerous further species obtained from cockroaches and earwigs to improve the resolution of the phylogenetic analysis, we found a robust afliation of nephridiophagids with the Chytridiomycota—a group of zoosporic fungi that comprises parasites of diverse host taxa, such as microphytes, plants, and amphibians. The presence of the same nephridiophagid species in two only distantly related cockroaches indicates that their host specifcity is not as strict as generally assumed. Insects are the most diverse group of all animals. So far, about one million species have been described and recent estimates for extant species range from 2.6 to 7.8 million1,2. Tey are globally distributed and impact human life at numerous levels. In agriculture, for instance, insects play a major role as both pollinators (e.g., honey bees) and pests that feed on crops (e.g., grasshoppers). -
Thesis (PDF, 13.51MB)
Insects and their endosymbionts: phylogenetics and evolutionary rates Daej A Kh A M Arab The University of Sydney Faculty of Science 2021 A thesis submitted in fulfilment of the requirements for the degree of Doctor of Philosophy Authorship contribution statement During my doctoral candidature I published as first-author or co-author three stand-alone papers in peer-reviewed, internationally recognised journals. These publications form the three research chapters of this thesis in accordance with The University of Sydney’s policy for doctoral theses. These chapters are linked by the use of the latest phylogenetic and molecular evolutionary techniques for analysing obligate mutualistic endosymbionts and their host mitochondrial genomes to shed light on the evolutionary history of the two partners. Therefore, there is inevitably some repetition between chapters, as they share common themes. In the general introduction and discussion, I use the singular “I” as I am the sole author of these chapters. All other chapters are co-authored and therefore the plural “we” is used, including appendices belonging to these chapters. Part of chapter 2 has been published as: Bourguignon, T., Tang, Q., Ho, S.Y., Juna, F., Wang, Z., Arab, D.A., Cameron, S.L., Walker, J., Rentz, D., Evans, T.A. and Lo, N., 2018. Transoceanic dispersal and plate tectonics shaped global cockroach distributions: evidence from mitochondrial phylogenomics. Molecular Biology and Evolution, 35(4), pp.970-983. The chapter was reformatted to include additional data and analyses that I undertook towards this paper. My role was in the paper was to sequence samples, assemble mitochondrial genomes, perform phylogenetic analyses, and contribute to the writing of the manuscript. -
Phylogeny and Life History Evolution of Blaberoidea (Blattodea)
78 (1): 29 – 67 2020 © Senckenberg Gesellschaft für Naturforschung, 2020. Phylogeny and life history evolution of Blaberoidea (Blattodea) Marie Djernæs *, 1, 2, Zuzana K otyková Varadínov á 3, 4, Michael K otyk 3, Ute Eulitz 5, Kla us-Dieter Klass 5 1 Department of Life Sciences, Natural History Museum, London SW7 5BD, United Kingdom — 2 Natural History Museum Aarhus, Wilhelm Meyers Allé 10, 8000 Aarhus C, Denmark; Marie Djernæs * [[email protected]] — 3 Department of Zoology, Faculty of Sci- ence, Charles University, Prague, 12844, Czech Republic; Zuzana Kotyková Varadínová [[email protected]]; Michael Kotyk [[email protected]] — 4 Department of Zoology, National Museum, Prague, 11579, Czech Republic — 5 Senckenberg Natural History Collections Dresden, Königsbrücker Landstrasse 159, 01109 Dresden, Germany; Klaus-Dieter Klass [[email protected]] — * Corresponding author Accepted on February 19, 2020. Published online at www.senckenberg.de/arthropod-systematics on May 26, 2020. Editor in charge: Gavin Svenson Abstract. Blaberoidea, comprised of Ectobiidae and Blaberidae, is the most speciose cockroach clade and exhibits immense variation in life history strategies. We analysed the phylogeny of Blaberoidea using four mitochondrial and three nuclear genes from 99 blaberoid taxa. Blaberoidea (excl. Anaplectidae) and Blaberidae were recovered as monophyletic, but Ectobiidae was not; Attaphilinae is deeply subordinate in Blattellinae and herein abandoned. Our results, together with those from other recent phylogenetic studies, show that the structuring of Blaberoidea in Blaberidae, Pseudophyllodromiidae stat. rev., Ectobiidae stat. rev., Blattellidae stat. rev., and Nyctiboridae stat. rev. (with “ectobiid” subfamilies raised to family rank) represents a sound basis for further development of Blaberoidea systematics. -
Chapter 1: Global Spread of the German Cockroach
ORIGIN AND SPREAD OF THE GERMAN COCKROACH, BLATTELLA GERMANICA TANG QIAN (B.Sc. (Hons), Wuhan University, China) A THESIS SUBMITTED FOR THE DEGREE OF DOCTOR OF PHILOSOPHY DEPARTMENT OF BIOLOGICAL SCIENCES NATIONAL UNIVERSITY OF SINGAPORE 2015 Declaration Declaration I hereby declare that this thesis is my original work and it has been written by me in its entirety. I have duly acknowledged all the sources of information which have been used in the thesis. This thesis has also not been submitted for any degree in any university previously. Tang Qian 31 Dec 2015 i Acknowledgement Acknowledgement My Ph.D. was supported by the NUS Research Scholarship from the Singapore Ministry of Education. The research project was funded by the Lee Hiok Kwee Endowed Fund of the Department of Biological Sciences, the National University of Singapore to Associate Professor Theodore Evans. I would like to thank the Singapore Ministry of Education and the National University of Singapore for providing me such opportunity to enter the academic world. This thesis could not be finished without the effort of my supervisors: Associate Professor Theodore Evans and Assistant Professor Frank Rheindt. Associate Prof. Evans initiated this ambitious research project with confidence and insights. Assistant Prof. Rheindt supported this project with professional advice and knowledge in the field of population genetics. This project requires much effort to collect samples. Associate Prof. Evans and Assistant Prof. Rheindt always offered me their advice and time. There are many people involved in my Ph.D. project, so I would like to cite their contribution by chapter: For chapter one, I would like to thank those who spent days in museums retrieving German cockroach specimens for my review. -
Phylogeny and Life History Evolution of Blaberoidea (Blattodea) 29-67 78 (1): 29 – 67 2020
ZOBODAT - www.zobodat.at Zoologisch-Botanische Datenbank/Zoological-Botanical Database Digitale Literatur/Digital Literature Zeitschrift/Journal: Arthropod Systematics and Phylogeny Jahr/Year: 2020 Band/Volume: 78 Autor(en)/Author(s): Djernaes Marie, Varadinova Zuzana Kotykova, Kotyk Michael, Eulitz Ute, Klass Klaus-Dieter Artikel/Article: Phylogeny and life history evolution of Blaberoidea (Blattodea) 29-67 78 (1): 29 – 67 2020 © Senckenberg Gesellschaft für Naturforschung, 2020. Phylogeny and life history evolution of Blaberoidea (Blattodea) Marie Djernæs *, 1, 2, Zuzana Kotyková Varadínová 3, 4, Michael Kotyk 3, Ute Eulitz 5, Klaus-Dieter Klass 5 1 Department of Life Sciences, Natural History Museum, London SW7 5BD, United Kingdom — 2 Natural History Museum Aarhus, Wilhelm Meyers Allé 10, 8000 Aarhus C, Denmark; Marie Djernæs * [[email protected]] — 3 Department of Zoology, Faculty of Sci- ence, Charles University, Prague, 12844, Czech Republic; Zuzana Kotyková Varadínová [[email protected]]; Michael Kotyk [[email protected]] — 4 Department of Zoology, National Museum, Prague, 11579, Czech Republic — 5 Senckenberg Natural History Collections Dresden, Königsbrücker Landstrasse 159, 01109 Dresden, Germany; Klaus-Dieter Klass [[email protected]] — * Corresponding author Accepted on February 19, 2020. Published online at www.senckenberg.de/arthropod-systematics on May 26, 2019. Editor in charge: Gavin Svenson Abstract. Blaberoidea, comprised of Ectobiidae and Blaberidae, is the most speciose cockroach clade and exhibits immense variation in life history strategies. We analysed the phylogeny of Blaberoidea using four mitochondrial and three nuclear genes from 99 blaberoid taxa. Blaberoidea (excl. Anaplectidae) and Blaberidae were recovered as monophyletic, but Ectobiidae was not; Attaphilinae is deeply subordinate in Blattellinae and herein abandoned. -
Transoceanic Dispersal and Plate Tectonics Shaped
Transoceanic Dispersal and Plate Tectonics Shaped Global Cockroach Distributions: Evidence from Mitochondrial Phylogenomics Thomas Bourguignon,*,†,1,2,3 Qian Tang,†,4 Simon Y.W. Ho,1 Frantisek Juna,3 Zongqing Wang,5 Daej A. Arab,1 Stephen L. Cameron,6 James Walker,7 David Rentz,8 Theodore A. Evans,9 and Nathan Lo1 1School of Life and Environmental Sciences, University of Sydney, Sydney, NSW, Australia 2Okinawa Institute of Science and Technology Graduate University, Tancha, Onna-son, Okinawa, Japan 3Faculty of Forestry and Wood Sciences, Czech University of Life Sciences, Prague, Czech Republic 4Department of Biological Sciences, National University of Singapore, Singapore, Singapore 5 College of Plant Protection, Southwest University, Beibei, Chongqing, China Downloaded from https://academic.oup.com/mbe/article-abstract/35/4/970/4827068 by guest on 13 October 2019 6Department of Entomology, Purdue University, West Lafayette, IN 7Department of Agriculture and Water Resources, Cairns, QLD, Australia 8School of Marine and Tropical Biology, James Cook University, Townsville, QLD, Australia 9School of Animal Biology, University of Western Australia, Perth, WA, Australia †These authors contributed equally to this work. *Corresponding author: E-mail: [email protected]. Associate editor: Claudia Russo Abstract Following the acceptance of plate tectonics theory in the latter half of the 20th century, vicariance became the dominant explanation for the distributions of many plant and animal groups. In recent years, however, molecular-clock analyses have challenged a number of well-accepted hypotheses of vicariance. As a widespread group of insects with a fossil record dating back 300 My, cockroaches provide an ideal model for testing hypotheses of vicariance through plate tectonics versus transoceanic dispersal. -
Transoceanic Dispersal and Plate Tectonics Shaped Global Cockroach Distributions: Evidence from Mitochondrial Phylogenomics
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by OIST Institutional Repository Transoceanic Dispersal and Plate Tectonics Shaped Global Cockroach Distributions: Evidence from Mitochondrial Phylogenomics Author Thomas Bourguignon, Qian Tang, Simon Y W Ho, Frantisek Juna, Zongqing Wang, Daej A Arab, Stephen L Cameron, James Walker, David Rentz, Theodore A Evans, Nathan Lo journal or Molecular Biology and Evolution publication title volume 35 number 4 page range 970-983 year 2018-02-06 Publisher Oxford University Press on behalf of the Society for Molecular Biology and Evolution Rights (C) 2018 The Author(s). This is a pre-copyedited, author-produced version of an article accepted for publication in Molecular Biology and Evolution following peer review. The version of record [Thomas Bourguignon, Qian Tang, Simon Y W Ho, Frantisek Juna, Zongqing Wang, Daej A Arab, Stephen L Cameron, James Walker, David Rentz, Theodore A Evans, Nathan Lo; Transoceanic Dispersal and Plate Tectonics Shaped Global Cockroach Distributions: Evidence from Mitochondrial Phylogenomics, Molecular Biology and Evolution, Volume 35, Issue 4, 1 April 2018, Pages 970 983] is available online at: https://academic.oup.com/mbe/article/35/4/970/ 4827068, http://dx.doi.org/10.1093/molbev/msy013. Author's flag author URL http://id.nii.ac.jp/1394/00000654/ doi: info:doi/10.1093/molbev/msy013 Article: Discoveries “CFP-Tree” Transoceanic dispersal and plate tectonics shaped global cockroach distributions: evidence from mitochondrial phylogenomics Thomas Bourguignon1,2,3*†, Tang Qian4†, Simon Y. W. Ho1, Frantisek Juna2, Zongqing Wang5, Daej A. Arab1, Stephen L. Cameron6, James Walker7, David Rentz8, Theodore A. -
Roach Crossing's Cockroach Husbandry Guide V1.1
Version 1.1, Updated 8 Oct. 2016 1 Roach Crossing’s Cockroach Husbandry Guide By Kyle Kandilian, Roach Crossing LLC Distribution prohibited; please link to the download page to share. Introduction Of all organisms reared in captivity, few rival the humble cockroach in its durability, prolificness, and tenacity. The ancient association of Homo sapiens and several species commonly referred to as pests extends thousands of years back in time, perhaps even to the very beginning of human civilizations. More archaic than this relatively recent union, it is not unlikely that the often commensal relationship between roaches and a mammalian host extends millions of years into the past, evidenced by present-day relationships between ancient roach lineages (such as the Corydiidae, or sand roaches) and modern hosts (burrowing mammals). It is on the basic premises of providing adequate food, water, shelter, heat, and space that most roaches thrive. Within the stable indoor microclimate of a properly equipped aquarium or plastic bin, it is easy and inexpensive to rear a thriving roach colony for feeding other organisms, watching, for research, and as an exciting and engaging hobby. Description Cockroaches are members of the taxonomic class Insecta, order Blattodea. Within this fascinating order are several families and similar groupings, outlined below. Of these groups, the most frequently cultured species belong to the families Blaberidae, Ectobiidae, Blattidae, and Corydiidae. Cockroach taxonomy information acquired from the Blattodea Species File Online. Roach Crossing © 2016. All Rights Reserved. Distribution prohibited; please access the file at www.RoachCrossing.com Version 1.1, Updated 8 Oct. 2016 2 In general, cockroaches are dorsolaterally flattened insects with chewing mouthparts, long, filamentous antennae, large pronota (head shields) hiding a sizable head, robust abdomens, and legs adapted to running or burrowing. -
Long Rdna Amplicon Sequencing of Insect-Infecting Nephridiophagids
bioRxiv preprint doi: https://doi.org/10.1101/2020.10.14.339143; this version posted October 14, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. 1 Long rDNA amplicon sequencing of insect-infecting nephridiophagids 2 reveals their affiliation to the Chytridiomycota (Fungi) and a potential to 3 switch between hosts 4 5 Jürgen F. H. Strassert1*, Christian Wurzbacher2, Vincent Hervé3, Taraha Antany1, Andreas 6 Brune3, Renate Radek1* 7 8 1 Evolutionary Biology, Institute of Biology, Free University of Berlin, Berlin, Germany 9 2 Chair of Urban Water Systems Engineering, Technical University of Munich, Garching, 10 Germany 11 3 Research Group Insect Gut Microbiology and Symbiosis, Max Planck Institute for 12 Terrestrial Microbiology, Marburg, Germany 13 14 ORCIDs: 15 Jürgen F. H. Strassert: 0000-0001-6786-7563; Christian Wurzbacher: 0000-0001-7418-0831; 16 Vincent Hervé: 0000-0002-3495-561X; Andreas Brune: 0000-0002-2667-4391; Renate 17 Radek: 0000-0001-7605-7546 18 19 *Corresponding authors. Evolutionary Biology, Institute for Biology/Zoology, Free University 20 of Berlin, Berlin, Germany. 21 E-mail addresses: 22 Jürgen F. H. Strassert: [email protected] 23 Renate Radek: [email protected] bioRxiv preprint doi: https://doi.org/10.1101/2020.10.14.339143; this version posted October 14, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. -
Diet Is Not the Primary Driver of Bacterial Community Structure in the Gut of Litter- Feeding Cockroaches Niclas Lampert1, Aram Mikaelyan1,2 and Andreas Brune1*
Lampert et al. BMC Microbiology (2019) 19:238 https://doi.org/10.1186/s12866-019-1601-9 RESEARCH ARTICLE Open Access Diet is not the primary driver of bacterial community structure in the gut of litter- feeding cockroaches Niclas Lampert1, Aram Mikaelyan1,2 and Andreas Brune1* Abstract Background: Diet is a major determinant of bacterial community structure in termite guts, but evidence of its importance in the closely related cockroaches is conflicting. Here, we investigated the ecological drivers of the bacterial gut microbiota in cockroaches that feed on lignocellulosic leaf litter. Results: The physicochemical conditions determined with microsensors in the guts of Ergaula capucina, Pycnoscelus surinamensis, and Byrsotria rothi were similar to those reported for both wood-feeding and omnivorous cockroaches. All gut compartments were anoxic at the center and showed a slightly acidic to neutral pH and variable but slightly reducing conditions. Hydrogen accumulated only in the crop of B. rothi. High-throughput amplicon sequencing of bacterial 16S rRNA genes documented that community structure in individual gut compartments correlated strongly with the respective microenvironmental conditions. A comparison of the hindgut microbiota of cockroaches and termites from different feeding groups revealed that the vast majority of the core taxa in cockroaches with a lignocellulosic diet were present also in omnivorous cockroaches but absent in wood- feeding higher termites. Conclusion: Our results indicate that diet is not the primary driver of bacterial community structure in the gut of wood- and litter-feeding cockroaches. The high similarity to the gut microbiota of omnivorous cockroaches suggests that the dietary components that are actually digested do not differ fundamentally between feeding groups. -
Molecular Phylogeny of Blaberidae
Molecular phylogeny of Blaberidae (Dictyoptera, Blattodea) with implications for taxonomy and evolutionary studies Frédéric Legendre, Philippe Grandcolas, France Thouzé To cite this version: Frédéric Legendre, Philippe Grandcolas, France Thouzé. Molecular phylogeny of Blaberidae (Dic- tyoptera, Blattodea) with implications for taxonomy and evolutionary studies. European Journal of Taxonomy, Consortium of European Natural History Museums, 2017, pp.1-13. 10.5852/ejt.2017.291. hal-01509672 HAL Id: hal-01509672 https://hal.sorbonne-universite.fr/hal-01509672 Submitted on 18 Apr 2017 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Distributed under a Creative Commons Attribution| 4.0 International License European Journal of Taxonomy 291: 1–13 ISSN 2118-9773 https://doi.org/10.5852/ejt.2017.291 www.europeanjournaloftaxonomy.eu 2017 · Legendre F. et al. This work is licensed under a Creative Commons Attribution 3.0 License. DNA Library of Life, research article urn:lsid:zoobank.org:pub:59ADAF1D-4704-49A2-9467-ADE8813F75FA Molecular phylogeny of Blaberidae (Dictyoptera, Blattodea), with implications for taxonomy and evolutionary scenarios Frédéric LEGENDRE 1,*, Philippe GRANDCOLAS 2 & France THOUZÉ 3 Institut de Systématique, Évolution, Biodiversité ISYEB – UMR 7205 – MNHN CNRS UPMC EPHE, Muséum national d’Histoire naturelle, Sorbonne Universités, 57 rue Cuvier, CP 50, 75005 Paris, France. -
A Survey of Genome Size Diversity Within Scale Insects (Hemiptera: Coccoidea) and Cockroaches and Termites (Blattodea)
A Survey of Genome Size Diversity Within Scale Insects (Hemiptera: Coccoidea) and Cockroaches and Termites (Blattodea) by Darren James Kelly A Thesis presented to The University of Guelph In partial fulfilment of requirements for the degree of Master of Science in Integrative Biology Guelph, Ontario, Canada © Darren James Kelly, May, 2018 ABSTRACT A SURVEY OF GENOME SIZE DIVERSITY WITHIN SCALE INSECTS (HEMIPTERA: COCCOIDEA) AND COCKROACHES AND TERMITES (BLATTODEA) Darren James Kelly Advisor: University of Guelph, 2018 Dr. T. Ryan Gregory This thesis is an investigation of the genome size diversity present within two diverse insect groups: the hemipteran superfamily Coccoidea (scale insects) and the order Blattodea (cockroaches and termites). Data have previously been lacking for these two groups, even though both present some intriguing potential patterns of genome size diversity related to unique aspects of their biology. More than 140 species from the two groups were estimated for genome size using Feulgen Image Analysis Densitometry (FIAD). Coccoidean genome sizes ranged from 0.15pg-2.1pg (n=62 species) while blattodeans ranged from 0.58pg-9.58pg (n=70 species). These data were then correlated with organismal traits related to ecology, morphology, metamorphosis, and reproduction. Genome size was found to be most strongly related to body size and geographic range size in scale insects and to the evolution of sociality in blattodeans. iii Acknowledgments To start, I am extremely thankful for this opportunity to complete my MSc under Dr. T. Ryan Gregory. I am ever grateful for being guided by an accessible, humorous, and knowledgeable advisor for this journey; I left every meeting and discussion with further understanding and confidence in my work.