Supplementary Table 3. Alternative usage following PRMT6 knockdown in MCF-7 cells. Table shows symbol, NCBI link, gene annotation, significant alternative exon usage and alternative exon usage corrected with Benjamini and Hochberg False Discovery Rate (FDR). GeneSymbol NCBILink Annotation Gene Exon UsageAlt. Significant Exon UsageAlt. corrected withBenjamini and Hochberg FalseDiscovery Rate (FDR) hmcn1 NM_031935 hemicentin 1 1.37E-38 1.18E-34 nin NM_020921 ninein (GSK3B interacting ) 1.22E-38 2.10E-34 sytl2 NM_206928 -like 2 2.48E-35 1.43E-31 NM_006415 serine palmitoyltransferase long chain base subunit 1 1.37E-31 5.88E-28 antxr1 NM_018153 anthrax toxin 1 1.62E-27 5.59E-24 slc7a5p1 NR_002593 solute carrier family 7 (cationic amino acid transporter y+ system) member 5 1 2.66E-26 7.63E-23 myo6 NM_004999 VI 2.52E-25 6.20E-22 zhx1 NM_007222 zinc fingers and 1 2.41E-23 5.19E-20 kiaa1429 NM_015496 KIAA1429 8.71E-22 1.67E-18 ctnnd1 NM_001331 catenin (cadherin-associated protein) delta 1 2.34E-17 4.03E-14 thrap1 NM_005121 thyroid associated protein 1 2.73E-17 4.28E-14 ncoa4 NM_005437 coactivator 4 7.87E-17 1.13E-13 dock1 NM_001380 dedicator of cytokinesis 1 1.04E-16 1.38E-13 utrn NM_007124 utrophin 1.21E-16 1.48E-13 mina NM_153182 induced nuclear antigen 4.74E-16 5.44E-13 myef2 NM_016132 myelin expression factor 2 7.29E-16 7.85E-13 fam62b NM_020728 family with sequence similarity 62 (C2 domain containing) member B 4.67E-15 4.74E-12 dst NM_183380 dystonin 9.08E-15 8.69E-12 epb41l1 NM_012156 erythrocyte membrane protein band 4.1-like 1 1.34E-14 1.21E-11 ncoa3 NM_181659 nuclear receptor coactivator 3 1.84E-14 1.59E-11 stag2 NM_001042749 stromal antigen 2 3.78E-14 3.10E-11 pten NM_000314 phosphatase and tensin homolog (mutated in multiple advanced cancers 1) 3.97E-14 3.11E-11 prmt3 NM_005788 protein arginine methyltransferase 3 4.59E-14 3.44E-11 pspc1 NM_001042414 paraspeckle component 1 5.34E-14 3.83E-11 atp2a2 NM_170665 ATPase Ca++ transporting cardiac muscle slow twitch 2 1.09E-13 7.52E-11 ipo7 NM_006391 importin 7 1.31E-13 8.36E-11 camsap1l1 NM_203459 regulated spectrin-associated protein 1-like 1 1.31E-13 8.66E-11 ugcg NM_003358 UDP-glucose ceramide glucosyltransferase 2.42E-13 1.49E-10 paics NM_001079524 phosphoribosylaminoimidazole carboxylase phosphoribosylaminoimidazole succinocarboxamide synthetase5.10E-13 3.03E-10 isoc1 NM_016048 isochorismatase domain containing 1 1.11E-12 6.19E-10 NM_033000 general II i 1.11E-12 6.37E-10 smg1 NM_015092 PI-3-kinase-related kinase SMG-1 1.57E-12 8.46E-10 ube3a NM_130839 ubiquitin protein E3A ( papilloma virus E6-associated protein Angelman syndrome) 1.88E-12 9.83E-10 asph NM_004318 aspartate beta-hydroxylase 2.10E-12 1.06E-09 ttc3 NM_001001894 tetratricopeptide repeat domain 3 2.59E-12 1.27E-09 ptpn13 NM_080685 protein tyrosine phosphatase non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase) 4.11E-12 1.91E-09 c1orf21 NM_030806 1 open reading frame 21 4.06E-12 1.94E-09 dhx15 NM_001358 DEAH (Asp-Glu-Ala-His) box polypeptide 15 4.88E-12 2.21E-09 atp6v0a4 NM_130841 ATPase H+ transporting lysosomal V0 subunit a4 7.06E-12 3.12E-09 hexb NM_000521 hexosaminidase B (beta polypeptide) 8.60E-12 3.70E-09 osbp NM_002556 oxysterol binding protein 1.51E-11 6.36E-09 ppp1cb NM_002709 protein phosphatase 1 catalytic subunit beta isoform 2.06E-11 8.44E-09 fancd2 NM_033084 Fanconi anemia complementation group D2 2.85E-11 1.14E-08 ak7 NM_152327 adenylate kinase 7 3.04E-11 1.17E-08 setd7 NM_030648 SET domain containing (lysine methyltransferase) 7 3.01E-11 1.18E-08 ldha NM_005566 lactate dehydrogenase A 3.35E-11 1.23E-08 crot NM_021151 carnitine O-octanoyltransferase 3.30E-11 1.24E-08 yme1l1 NM_139313 YME1-like 1 (S. cerevisiae) 3.87E-11 1.39E-08 stau1 NM_001037328 staufen RNA binding protein homolog 1 (Drosophila) 5.24E-11 1.84E-08 kif5b NM_004521 family member 5B 5.76E-11 1.98E-08 mbnl2 NM_144778 muscleblind-like 2 (Drosophila) 9.12E-11 3.08E-08 bccip NM_016567 BRCA2 and CDKN1A interacting protein 9.78E-11 3.18E-08 acbd5 NM_145698 acyl-Coenzyme A binding domain containing 5 9.72E-11 3.22E-08 ppm1b NM_002706 protein phosphatase 1B (formerly 2C) magnesium-dependent beta isoform 1.35E-10 4.32E-08 dhx40 NM_024612 DEAH (Asp-Glu-Ala-His) box polypeptide 40 1.79E-10 5.61E-08 xrn2 NM_012255 5'-3' exoribonuclease 2 1.83E-10 5.63E-08 rcn1 NM_002901 reticulocalbin 1 EF-hand binding domain 2.04E-10 6.16E-08 bms1 NM_014753 BMS1 homolog ribosome assembly protein (yeast) 2.23E-10 6.63E-08 slc9a3r1 NM_004252 solute carrier family 9 (sodium/hydrogen exchanger) member 3 regulator 1 3.68E-10 1.07E-07 them4 NM_053055 thioesterase superfamily member 4 3.78E-10 1.09E-07 abr NM_021962 active BCR-related gene 3.97E-10 1.12E-07 NM_003870 IQ motif containing GTPase activating protein 1 4.09E-10 1.14E-07 armcx6 NM_019007 armadillo repeat containing X-linked 6 4.39E-10 1.20E-07 rtn4 NM_020532 reticulon 4 5.73E-10 1.54E-07 brwd1 NM_033656 bromodomain and WD repeat domain containing 1 7.83E-10 2.04E-07 hsmpp8 NM_017520 M-phase phosphoprotein mpp8 7.78E-10 2.06E-07 cnot2 NM_014515 CCR4-NOT transcription complex subunit 2 8.74E-10 2.25E-07 pa2g4 NM_006191 proliferation-associated 2G4 38kDa 9.09E-10 2.30E-07 cse1l NM_001316 CSE1 chromosome segregation 1-like (yeast) 1.22E-09 3.05E-07 sulf1 NM_015170 sulfatase 1 1.25E-09 3.07E-07 ncor1 NM_006311 nuclear receptor co-repressor 1 1.31E-09 3.17E-07 mon2 NM_015026 MON2 homolog (S. cerevisiae) 1.50E-09 3.60E-07 ehbp1 NM_015252 EH domain binding protein 1 1.61E-09 3.80E-07 ddx6 NM_004397 DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 1.78E-09 4.14E-07 NM_006325 RAN member RAS oncogene family 1.86E-09 4.22E-07 fer1l3 NM_133337 fer-1-like 3 myoferlin (C. elegans) 1.89E-09 4.22E-07 ywhae NM_006761 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon polypeptide 1.85E-09 4.25E-07 enosf1 NM_017512 enolase superfamily member 1 2.85E-09 6.30E-07 thoc2 NM_020449 THO complex 2 3.01E-09 6.56E-07 ppp3r1 NM_000945 protein phosphatase 3 (formerly 2B) regulatory subunit B alpha isoform 3.43E-09 7.38E-07 npnt NM_001033047 nephronectin 4.17E-09 8.76E-07 flj20273 AF262323 RNA-binding protein 4.12E-09 8.76E-07 prdm4 NM_012406 PR domain containing 4 4.60E-09 9.54E-07 baz1a NM_013448 bromodomain adjacent to domain 1A 4.81E-09 9.87E-07 polr3k NM_016310 polymerase (RNA) III (DNA directed) polypeptide K 12.3 kDa 5.82E-09 1.18E-06 sec14l1 NM_003003 SEC14-like 1 (S. cerevisiae) 8.13E-09 1.63E-06 hipk1 NM_198269 homeodomain interacting protein kinase 1 8.73E-09 1.73E-06 uros NM_000375 uroporphyrinogen III synthase (congenital erythropoietic porphyria) 8.96E-09 1.75E-06 esr1 NM_000125 1 1.20E-08 2.33E-06 helz NM_014877 with zinc finger 1.27E-08 2.43E-06 dstn NM_001011546 destrin (actin depolymerizing factor) 1.52E-08 2.87E-06 vezt NM_017599 vezatin adherens junctions transmembrane protein 1.71E-08 3.21E-06 kiaa0265 NM_014997 KIAA0265 protein 1.82E-08 3.36E-06 acp1 NM_004300 acid phosphatase 1 soluble 2.77E-08 5.07E-06 cnot1 NM_016284 CCR4-NOT transcription complex subunit 1 3.18E-08 5.76E-06 ppp1r10 NM_002714 protein phosphatase 1 regulatory (inhibitor) subunit 10 3.60E-08 6.45E-06 rps6kb1 NM_003161 ribosomal protein S6 kinase 70kDa polypeptide 1 3.95E-08 6.94E-06 atad2 NM_014109 ATPase family AAA domain containing 2 3.93E-08 6.97E-06 zmynd11 NM_212479 zinc finger MYND domain containing 11 4.52E-08 7.87E-06 prex1 NM_020820 phosphatidylinositol 3 4 5-trisphosphate-dependent RAC exchanger 1 4.90E-08 8.44E-06 rad51c NM_058216 RAD51 homolog C (S. cerevisiae) 5.01E-08 8.55E-06 epb41l2 NM_001431 erythrocyte membrane protein band 4.1-like 2 5.20E-08 8.78E-06 ybx1 NM_004559 Y box binding protein 1 5.43E-08 9.00E-06 pex1 NM_000466 peroxisome biogenesis factor 1 5.42E-08 9.07E-06 tegt NM_003217 testis enhanced gene transcript (BAX inhibitor 1) 5.56E-08 9.12E-06 NM_006526 zinc finger protein 217 6.09E-08 9.89E-06 idh1 NM_005896 isocitrate dehydrogenase 1 (NADP+) soluble 6.15E-08 9.90E-06 nomo1 NM_014287 NODAL modulator 1 6.31E-08 1.01E-05 bptf NM_004459 bromodomain PHD finger transcription factor 6.44E-08 1.01E-05 mthfd1l NM_015440 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like 6.42E-08 1.01E-05 osbpl1a NM_133268 oxysterol binding protein-like 1A 6.80E-08 1.06E-05 appbp1 NM_001018159 amyloid beta precursor protein binding protein 1 7.09E-08 1.09E-05 pggt1b NM_005023 protein geranylgeranyltransferase type I beta subunit 7.52E-08 1.15E-05 psmd12 NM_002816 proteasome (prosome macropain) 26S subunit non-ATPase 12 7.73E-08 1.17E-05 azin1 NM_148174 antizyme inhibitor 1 8.40E-08 1.25E-05 fus NM_001010850 fusion (involved in t(12;16) in malignant liposarcoma) 8.33E-08 1.25E-05 NM_001079539 X-box binding protein 1 1.00E-07 1.47E-05 calm1 NM_006888 calmodulin 1 (phosphorylase kinase delta) 1.09E-07 1.58E-05 tia1 NM_022173 TIA1 cytotoxic granule-associated RNA binding protein 1.09E-07 1.59E-05 sdccag1 NM_004713 serologically defined colon cancer antigen 1 1.11E-07 1.59E-05 mrlc2 NM_033546 myosin regulatory light chain MRLC2 1.13E-07 1.60E-05 dicer1 NM_177438 Dicer1 Dcr-1 homolog (Drosophila) 1.17E-07 1.65E-05 trim37 NM_001005207 tripartite motif-containing 37 1.19E-07 1.67E-05 rp11-217h1.1 NM_032121 implantation-associated protein 1.21E-07 1.68E-05 edd1 NM_015902 E3 ubiquitin protein ligase HECT domain containing 1 1.26E-07 1.73E-05 garnl1 NM_014990 GTPase activating Rap/RanGAP domain-like 1 1.29E-07 1.76E-05 purb NM_033224 purine-rich element binding protein B 1.34E-07 1.82E-05 prkar1a NM_212472 protein kinase cAMP-dependent regulatory type I alpha (tissue specific extinguisher 1) 1.35E-07 1.82E-05 usp10 NM_005153 ubiquitin specific peptidase 10 1.42E-07 1.88E-05 sulf2 NM_198596 sulfatase 2 1.41E-07 1.88E-05 ckap5 NM_001008938 cytoskeleton associated protein 5 1.49E-07 1.96E-05 unc13b NM_006377 unc-13 homolog B (C. elegans) 1.56E-07 2.04E-05 usp21 NM_001014443 ubiquitin specific peptidase 21 1.74E-07 2.26E-05 hypk NM_016400 Huntingtin interacting protein K 1.90E-07 2.44E-05 tpm3 NM_152263 tropomyosin 3 1.96E-07 2.51E-05 fanci BC004277 Fanconi anemia complementation group I 2.09E-07 2.65E-05 psmc6 NM_002806 proteasome (prosome macropain) 26S subunit ATPase 6 2.16E-07 2.71E-05 atrx NM_138271 alpha thalassemia/mental retardation syndrome X-linked (RAD54 homolog S. cerevisiae) 2.29E-07 2.86E-05 hsp90b1 NM_003299 heat shock protein 90kDa beta (Grp94) member 1 2.34E-07 2.86E-05 usf2 NM_003367 upstream transcription factor 2 c-fos interacting 2.34E-07 2.88E-05 hebp2 NM_014320 heme binding protein 2 2.34E-07 2.90E-05 dhx9 NM_001357 DEAH (Asp-Glu-Ala-His) box polypeptide 9 2.51E-07 3.04E-05 arih1 NM_005744 ariadne homolog ubiquitin-conjugating E2 binding protein 1 (Drosophila) 2.63E-07 3.17E-05 selt NM_016275 selenoprotein T 2.66E-07 3.18E-05 ube2g1 NM_003342 ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog yeast) 2.72E-07 3.23E-05 iars NM_002161 isoleucyl-tRNA synthetase 2.89E-07 3.41E-05 h2afj NM_018267 H2A histone family member J 2.98E-07 3.50E-05 kiaa1033 NM_015275 KIAA1033 3.07E-07 3.57E-05 usp7 NM_003470 ubiquitin specific peptidase 7 (herpes virus-associated) 3.12E-07 3.61E-05 sept9 NM_006640 septin 9 3.18E-07 3.66E-05 ccng1 NM_199246 cyclin G1 3.73E-07 4.26E-05 trip13 NM_004237 interactor 13 3.88E-07 4.39E-05 tpm2 NM_213674 tropomyosin 2 (beta) 4.05E-07 4.56E-05 loc595101 NR_002453 PI-3-kinase-related kinase SMG-1 pseudogene 4.39E-07 4.91E-05 c2orf33 BC093024 chromosome 2 open reading frame 33 4.51E-07 5.02E-05 rpl37a NM_000998 ribosomal protein L37a 4.57E-07 5.05E-05 letm1 NM_012318 -EF-hand containing transmembrane protein 1 4.77E-07 5.20E-05 trpv2 NM_016113 transient receptor potential cation channel subfamily V member 2 4.76E-07 5.22E-05 ranbp5 NM_002271 RAN binding protein 5 5.34E-07 5.75E-05 arhgap12 NM_018287 Rho GTPase activating protein 12 5.31E-07 5.76E-05 rps6kc1 NM_012424 ribosomal protein S6 kinase 52kDa polypeptide 1 5.44E-07 5.82E-05 wnk1 NM_018979 WNK lysine deficient protein kinase 1 5.61E-07 5.96E-05 c19orf2 NM_003796 chromosome 19 open reading frame 2 5.70E-07 6.02E-05 baz2a NM_013449 bromodomain adjacent to zinc finger domain 2A 5.78E-07 6.07E-05 scarna8 NR_003009 small Cajal body-specific RNA 8 6.50E-07 6.74E-05 arl6ip1 NM_015161 ADP-ribosylation factor-like 6 interacting protein 1 6.48E-07 6.77E-05 timm23 NM_006327 of inner mitochondrial membrane 23 homolog (yeast) 6.86E-07 7.07E-05 armcx3 NM_177947 armadillo repeat containing X-linked 3 7.25E-07 7.43E-05 loc730258 XM_001134401 region containing neuroblastoma breakpoint family member 8; neuroblastoma breakpoint family member 107.43E-07 7.57E-05 hectd1 NM_015382 HECT domain containing 1 8.05E-07 8.16E-05 pomp NM_015932 proteasome maturation protein 8.96E-07 9.03E-05 tgs1 NM_024831 trimethylguanosine synthase homolog (S. cerevisiae) 1.01E-06 1.01E-04 tnfrsf10b NM_003842 tumor necrosis factor receptor superfamily member 10b 1.03E-06 1.02E-04 ddx3x NM_001356 DEAD (Asp-Glu-Ala-Asp) box polypeptide 3 X-linked 1.05E-06 1.03E-04 NM_018890 ras-related C3 botulinum toxin 1 (rho family small GTP binding protein Rac1) 1.03E-06 1.03E-04 eftud1 NM_024580 Tu GTP binding domain containing 1 1.05E-06 1.03E-04 triad3 NM_207111 TRIAD3 protein 1.13E-06 1.09E-04 fn1 NM_212482 fibronectin 1 1.13E-06 1.09E-04 ccdc131 NM_144982 coiled-coil domain containing 131 1.12E-06 1.09E-04 tyms NM_001071 thymidylate synthetase 1.19E-06 1.13E-04 lamp2 NM_002294 lysosomal-associated membrane protein 2 1.19E-06 1.13E-04 adam10 NM_001110 ADAM metallopeptidase domain 10 1.21E-06 1.14E-04 usp9x NM_001039590 ubiquitin specific peptidase 9 X-linked 1.25E-06 1.17E-04 ubap2l NM_014847 ubiquitin associated protein 2-like 1.28E-06 1.20E-04 abcc4 NM_005845 ATP-binding cassette sub-family C (CFTR/MRP) member 4 1.40E-06 1.30E-04 NM_005994 T-box 2 1.52E-06 1.41E-04 abca1 NM_005502 ATP-binding cassette sub-family A (ABC1) member 1 1.58E-06 1.46E-04 atxn1 NM_000332 ataxin 1 1.63E-06 1.49E-04 chd2 NM_001271 chromodomain helicase DNA binding protein 2 1.64E-06 1.50E-04 ckap2 NM_018204 cytoskeleton associated protein 2 1.93E-06 1.75E-04 larp1 NM_015315 La ribonucleoprotein domain family member 1 1.94E-06 1.75E-04 prkcd NM_212539 protein kinase C delta 1.99E-06 1.78E-04 cbwd3 AK092175 COBW-like placental protein 1.99E-06 1.78E-04 NM_001520 general transcription factor IIIC polypeptide 1 alpha 220kDa 2.02E-06 1.80E-04 ndfip1 NM_030571 Nedd4 family interacting protein 1 2.29E-06 2.03E-04 dars NM_001349 aspartyl-tRNA synthetase 2.66E-06 2.34E-04 arpc3 NM_005719 actin related protein 2/3 complex subunit 3 21kDa 2.73E-06 2.36E-04 nomo1 NM_014287 NODAL modulator 1 2.70E-06 2.36E-04 skip NM_130766 skeletal muscle and kidney enriched inositol phosphatase 2.72E-06 2.37E-04 chaf1b NM_005441 chromatin assembly factor 1 subunit B (p60) 2.84E-06 2.45E-04 igfbp3 NM_001013398 insulin-like growth factor binding protein 3 2.88E-06 2.46E-04 zmynd8 NM_183047 zinc finger MYND-type containing 8 2.90E-06 2.48E-04 gapdh NM_002046 glyceraldehyde-3-phosphate dehydrogenase 3.13E-06 2.66E-04 xpot NM_007235 exportin tRNA (nuclear export receptor for tRNAs) 3.54E-06 2.98E-04 rpl31 NM_000993 ribosomal protein L31 3.53E-06 2.98E-04 cep350 NM_014810 centrosomal protein 350kDa 4.11E-06 3.44E-04 c10orf137 NM_015608 open reading frame 137 4.16E-06 3.45E-04 ktn1 NM_182926 kinectin 1 (kinesin receptor) 4.15E-06 3.45E-04 syne2 NM_015180 spectrin repeat containing nuclear envelope 2 4.43E-06 3.65E-04 myl6 NM_021019 myosin light chain 6 alkali smooth muscle and non-muscle 4.48E-06 3.67E-04 kiaa1328 BC008670 KIAA1328 4.60E-06 3.76E-04 hnrph3 NM_012207 heterogeneous nuclear ribonucleoprotein H3 (2H9) 4.74E-06 3.85E-04 snora18 NR_002959 small nucleolar RNA H/ACA box 18 4.97E-06 3.98E-04 cbwd1 AY295766 COBW domain containing 1 4.92E-06 3.98E-04 mdn1 NM_014611 MDN1 midasin homolog (yeast) 4.95E-06 3.99E-04 exoc5 NM_006544 exocyst complex component 5 5.10E-06 4.05E-04 vldlr NM_003383 very low density lipoprotein receptor 5.08E-06 4.05E-04 ttll5 NM_015072 tyrosine ligase-like family member 5 5.20E-06 4.11E-04 mink1 NM_153827 misshapen-like kinase 1 (zebrafish) 5.38E-06 4.23E-04 sf3b1 NM_012433 splicing factor 3b subunit 1 155kDa 5.66E-06 4.43E-04 psma3 NM_152132 proteasome (prosome macropain) subunit alpha type 3 5.69E-06 4.43E-04 fkbp4 NM_002014 FK506 binding protein 4 59kDa 5.97E-06 4.63E-04 atxn2 NM_002973 ataxin 2 6.51E-06 5.00E-04 dab1 NM_021080 disabled homolog 1 (Drosophila) 6.54E-06 5.01E-04 eif2s3 NM_001415 eukaryotic translation initiation factor 2 subunit 3 gamma 52kDa 6.49E-06 5.01E-04 mlh1 NM_000249 mutL homolog 1 colon cancer nonpolyposis type 2 (E. coli) 6.88E-06 5.24E-04 cdc27 NM_001256 cell division cycle 27 homolog (S. cerevisiae) 7.05E-06 5.35E-04 jmjd1a NM_018433 jumonji domain containing 1A 8.45E-06 6.36E-04 eid1 NM_014335 EP300 interacting inhibitor of differentiation 1 8.44E-06 6.38E-04 slc38a1 NM_030674 solute carrier family 38 member 1 8.98E-06 6.72E-04 ilk NM_001014795 integrin-linked kinase 9.22E-06 6.85E-04 cspp1 NM_001077204 centrosome and spindle pole associated protein 1 9.22E-06 6.88E-04 txnrd1 NM_182729 thioredoxin reductase 1 9.36E-06 6.92E-04 anapc1 NM_022662 anaphase promoting complex subunit 1 9.72E-06 7.15E-04 syap1 NM_032796 synapse associated protein 1 SAP47 homolog (Drosophila) 9.81E-06 7.19E-04 nap1l1 NM_004537 nucleosome assembly protein 1-like 1 9.93E-06 7.25E-04 flj12949 NM_023008 hypothetical protein FLJ12949 9.98E-06 7.25E-04 ubc NM_021009 ubiquitin C 1.01E-05 7.29E-04 bcas2 NM_005872 breast carcinoma amplified sequence 2 1.06E-05 7.64E-04 lypla1 NM_006330 lysophospholipase I 1.07E-05 7.70E-04 inppl1 NM_001567 inositol polyphosphate phosphatase-like 1 1.09E-05 7.76E-04 nup155 NM_004298 nucleoporin 155kDa 1.13E-05 8.05E-04 rsu1 NM_012425 Ras suppressor protein 1 1.14E-05 8.07E-04 tm9sf2 NM_004800 transmembrane 9 superfamily member 2 1.16E-05 8.18E-04 nipa2 NM_030922 non imprinted in Prader-Willi/Angelman syndrome 2 1.19E-05 8.39E-04 nol11 NM_015462 nucleolar protein 11 1.20E-05 8.43E-04 prpf4b NM_003913 PRP4 pre-mRNA processing factor 4 homolog B (yeast) 1.22E-05 8.51E-04 cd276 NM_025240 CD276 molecule 1.23E-05 8.56E-04 rpp30 NM_006413 ribonuclease P/MRP 30kDa subunit 1.26E-05 8.70E-04 hip2 NM_005339 huntingtin interacting protein 2 1.28E-05 8.80E-04 ghitm NM_014394 growth hormone inducible transmembrane protein 1.31E-05 9.01E-04 kiaa0317 NM_001039479 KIAA0317 1.32E-05 9.03E-04 wwp1 NM_007013 WW domain containing E3 ubiquitin protein ligase 1 1.40E-05 9.51E-04 NM_001530 hypoxia-inducible factor 1 alpha subunit (basic helix-loop-helix transcription factor) 1.40E-05 9.51E-04 pcyt1a NM_005017 phosphate cytidylyltransferase 1 choline alpha 1.41E-05 9.55E-04 tacstd1 NM_002354 tumor-associated calcium signal transducer 1 1.48E-05 9.94E-04 cpsf3 NM_016207 cleavage and polyadenylation specific factor 3 73kDa 1.49E-05 9.96E-04 ldhb NM_002300 lactate dehydrogenase B 1.55E-05 1.04E-03 prkd3 NM_005813 protein kinase D3 1.59E-05 1.06E-03 ppm1e NM_014906 protein phosphatase 1E (PP2C domain containing) 1.70E-05 1.13E-03 NM_001001323 ATPase Ca++ transporting plasma membrane 1 1.72E-05 1.13E-03 hdac1 NM_004964 histone deacetylase 1 1.72E-05 1.13E-03 mgc70863 NM_203302 similar to RPL23AP7 protein 1.72E-05 1.13E-03 nasp NM_172164 nuclear autoantigenic sperm protein (histone-binding) 1.80E-05 1.17E-03 abi1 NM_001012751 abl-interactor 1 1.81E-05 1.18E-03 gorasp2 NM_015530 golgi reassembly stacking protein 2 55kDa 1.86E-05 1.20E-03 pitpnb NM_012399 phosphatidylinositol transfer protein beta 1.87E-05 1.20E-03 c9orf78 NM_016520 chromosome 9 open reading frame 78 1.91E-05 1.23E-03 hrsp12 NM_005836 heat-responsive protein 12 1.93E-05 1.24E-03 snx27 NM_030918 sorting nexin family member 27 2.06E-05 1.32E-03 herc1 NM_003922 hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 12.13E-05 1.35E-03 lrpprc NM_133259 leucine-rich PPR-motif containing 2.13E-05 1.35E-03 rab8b NM_016530 RAB8B member RAS oncogene family 2.15E-05 1.35E-03 hnrph1 NM_005520 heterogeneous nuclear ribonucleoprotein H1 (H) 2.15E-05 1.36E-03 mdm2 NM_002392 Mdm2 transformed 3T3 cell double minute 2 binding protein (mouse) 2.21E-05 1.39E-03 galnt3 NM_004482 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3 (GalNAc-T3) 2.26E-05 1.41E-03 prkdc NM_001081640 protein kinase DNA-activated catalytic polypeptide 2.28E-05 1.42E-03 stt3b NM_178862 STT3 subunit of the oligosaccharyltransferase complex homolog B (S. cerevisiae) 2.30E-05 1.43E-03 fam48a NM_001014286 family with sequence similarity 48 member A 2.31E-05 1.43E-03 syncrip NM_006372 synaptotagmin binding cytoplasmic RNA interacting protein 2.38E-05 1.47E-03 zbed5 NM_021211 zinc finger BED-type containing 5 2.41E-05 1.48E-03 zc3h8 NM_032494 zinc finger CCCH-type containing 8 2.50E-05 1.52E-03 adh5 NM_000671 alcohol dehydrogenase 5 (class III) chi polypeptide 2.53E-05 1.54E-03 cd59 NM_203331 CD59 molecule complement regulatory protein 2.52E-05 1.54E-03 btf3l4 NM_152265 basic transcription factor 3-like 4 2.59E-05 1.56E-03 baz2a NM_013449 bromodomain adjacent to zinc finger domain 2A 2.59E-05 1.56E-03 tcerg1 NM_006706 transcription elongation regulator 1 2.62E-05 1.57E-03 ddx1 NM_004939 DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 2.75E-05 1.64E-03 mgp NM_000900 matrix Gla protein 2.82E-05 1.68E-03 map3k4 NM_005922 mitogen-activated protein kinase kinase kinase 4 2.95E-05 1.75E-03 NM_015866 PR domain containing 2 with ZNF domain 2.99E-05 1.77E-03 actb NM_001101 actin beta 2.99E-05 1.77E-03 tars2 NM_025150 threonyl-tRNA synthetase 2 mitochondrial (putative) 3.02E-05 1.78E-03 slc20a1 NM_005415 solute carrier family 20 (phosphate transporter) member 1 3.21E-05 1.88E-03 depdc1b NM_018369 DEP domain containing 1B 3.22E-05 1.88E-03 supt16h NM_007192 suppressor of Ty 16 homolog (S. cerevisiae) 3.33E-05 1.94E-03 znf800 NM_176814 zinc finger protein 800 3.35E-05 1.94E-03 NM_001430 endothelial PAS domain protein 1 3.36E-05 1.94E-03 vdac1 NM_003374 voltage-dependent anion channel 1 3.44E-05 1.98E-03 ints2 NM_020748 integrator complex subunit 2 3.48E-05 2.00E-03 ppp1r9b NM_032595 protein phosphatase 1 regulatory (inhibitor) subunit 9B 3.50E-05 2.00E-03 nmt1 NM_021079 N-myristoyltransferase 1 3.59E-05 2.05E-03 ccdc44 NM_016360 coiled-coil domain containing 44 3.73E-05 2.12E-03 npip AB075516 nuclear pore complex interacting protein 3.89E-05 2.20E-03 rai14 NM_015577 retinoic acid induced 14 3.91E-05 2.21E-03 ywhaz NM_145690 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta polypeptide 4.02E-05 2.26E-03 trip11 NM_004239 thyroid hormone receptor interactor 11 4.09E-05 2.28E-03 NM_020865 DEAH (Asp-Glu-Ala-His) box polypeptide 36 4.08E-05 2.29E-03 larp4 NM_052879 La ribonucleoprotein domain family member 4 4.09E-05 2.29E-03 cta-216e10.6 NM_024588 hypothetical protein FLJ23584 4.21E-05 2.34E-03 echdc1 NM_018479 enoyl Coenzyme A hydratase domain containing 1 4.23E-05 2.34E-03 eif3s6 NM_001568 eukaryotic translation initiation factor 3 subunit 6 48kDa 4.30E-05 2.37E-03 hnrpdl NM_031372 heterogeneous nuclear ribonucleoprotein D-like 4.30E-05 2.37E-03 pum2 NM_015317 pumilio homolog 2 (Drosophila) 4.57E-05 2.51E-03 pola1 NM_016937 polymerase (DNA directed) alpha 1 4.62E-05 2.53E-03 dynlt3 NM_006520 light chain Tctex-type 3 4.70E-05 2.56E-03 eif5b NM_015904 eukaryotic translation initiation factor 5B 4.73E-05 2.57E-03 c20orf107 BC105792 chromosome 20 open reading frame 107 4.75E-05 2.57E-03 dld NM_000108 dihydrolipoamide dehydrogenase 4.81E-05 2.58E-03 npepps NM_006310 aminopeptidase puromycin sensitive 4.83E-05 2.58E-03 psd3 NM_015310 pleckstrin and Sec7 domain containing 3 4.80E-05 2.58E-03 pik3r1 NM_181523 phosphoinositide-3-kinase regulatory subunit 1 (p85 alpha) 4.79E-05 2.59E-03 anp32e NM_030920 acidic (leucine-rich) nuclear phosphoprotein 32 family member E 4.93E-05 2.62E-03 ngfrap1 NM_206917 nerve growth factor receptor (TNFRSF16) associated protein 1 4.93E-05 2.63E-03 capn7 NM_014296 7 5.10E-05 2.70E-03 mark3 NM_002376 MAP/microtubule affinity-regulating kinase 3 5.12E-05 2.70E-03 ascc3 NM_006828 activating signal cointegrator 1 complex subunit 3 5.14E-05 2.71E-03 hspc111 NM_016391 hypothetical protein HSPC111 5.39E-05 2.83E-03 tpm1 NM_001018020 tropomyosin 1 (alpha) 5.43E-05 2.84E-03 kpna2 NM_002266 karyopherin alpha 2 (RAG cohort 1 importin alpha 1) 5.49E-05 2.86E-03 fgd6 NM_018351 FYVE RhoGEF and PH domain containing 6 5.58E-05 2.90E-03 sesn1 NM_014454 sestrin 1 5.69E-05 2.95E-03 rbm25 NM_021239 RNA binding motif protein 25 5.74E-05 2.97E-03 akap8 NM_005858 A kinase (PRKA) anchor protein 8 5.96E-05 3.08E-03 spats1 NM_145026 spermatogenesis associated serine-rich 1 6.00E-05 3.09E-03 metap2 NM_006838 methionyl aminopeptidase 2 6.11E-05 3.13E-03 ube2d3 NM_181887 ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog yeast) 6.49E-05 3.32E-03 fam35a NM_019054 family with sequence similarity 35 member A 6.71E-05 3.42E-03 safb2 NM_014649 scaffold attachment factor B2 6.88E-05 3.49E-03 myo5c NM_018728 myosin VC 6.94E-05 3.52E-03 nbn NM_002485 nibrin 7.08E-05 3.57E-03 sugt1 NM_006704 SGT1 suppressor of G2 allele of SKP1 (S. cerevisiae) 7.17E-05 3.58E-03 epb41l5 NM_020909 erythrocyte membrane protein band 4.1 like 5 7.16E-05 3.59E-03 sfrs7 NM_001031684 splicing factor arginine/serine-rich 7 35kDa 7.13E-05 3.59E-03 copb2 NM_004766 coatomer protein complex subunit beta 2 (beta prime) 7.15E-05 3.59E-03 osbpl8 NM_001003712 oxysterol binding protein-like 8 7.30E-05 3.63E-03 iqwd1 NM_018442 IQ motif and WD repeats 1 7.36E-05 3.65E-03 mier3 NM_152622 mesoderm induction early response 1 family member 3 7.42E-05 3.66E-03 wdr54 NM_032118 WD repeat domain 54 7.41E-05 3.67E-03 usp3 NM_006537 ubiquitin specific peptidase 3 7.47E-05 3.68E-03 ccar1 NM_018237 cell division cycle and apoptosis regulator 1 7.56E-05 3.71E-03 NM_015634 KIAA1279 7.61E-05 3.71E-03 eef1a1 NM_001402 eukaryotic translation elongation factor 1 alpha 1 7.61E-05 3.72E-03 kpna2 NM_002266 karyopherin alpha 2 (RAG cohort 1 importin alpha 1) 7.67E-05 3.73E-03 zmiz2 NM_174929 zinc finger MIZ-type containing 2 7.77E-05 3.75E-03 c10orf119 BC004183 chromosome 10 open reading frame 119 7.76E-05 3.75E-03 fusip1 NM_006625 FUS interacting protein (serine/arginine-rich) 1 7.74E-05 3.75E-03 c13orf23 NM_025138 chromosome 13 open reading frame 23 7.83E-05 3.77E-03 smc4 NM_001002800 structural maintenance of 4 7.87E-05 3.78E-03 mfsd1 NM_022736 major facilitator superfamily domain containing 1 7.96E-05 3.81E-03 phkb NM_001031835 phosphorylase kinase beta 8.04E-05 3.84E-03 fusip1 NM_006625 FUS interacting protein (serine/arginine-rich) 1 8.31E-05 3.95E-03 NM_001014972 zinc finger protein 638 8.37E-05 3.97E-03 eef1a1 NM_001402 eukaryotic translation elongation factor 1 alpha 1 8.61E-05 4.07E-03 lrrc16 NM_017640 leucine rich repeat containing 16 8.89E-05 4.18E-03 adrb1 NM_000684 adrenergic beta-1- receptor 8.88E-05 4.19E-03 ate1 NM_001001976 arginyltransferase 1 9.49E-05 4.44E-03 vps35 NM_018206 vacuolar protein sorting 35 homolog (S. cerevisiae) 9.52E-05 4.44E-03 NM_012218 interleukin enhancer binding factor 3 90kDa 9.48E-05 4.45E-03 sar1a NM_020150 SAR1 gene homolog A (S. cerevisiae) 9.61E-05 4.48E-03 nbpf9 AK095030 neuroblastoma breakpoint family member 9 9.71E-05 4.50E-03 wdr41 NM_018268 WD repeat domain 41 9.74E-05 4.50E-03 st13 NM_003932 suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) 9.70E-05 4.50E-03 aplp2 NM_001642 amyloid beta (A4) precursor-like protein 2 9.78E-05 4.50E-03 susd4 NM_017982 sushi domain containing 4 1.02E-04 4.70E-03 ipo8 NM_006390 importin 8 1.03E-04 4.72E-03 pde4dip NM_014644 phosphodiesterase 4D interacting protein (myomegalin) 1.04E-04 4.76E-03 rab10 NM_016131 RAB10 member RAS oncogene family 1.07E-04 4.87E-03 utp20 NM_014503 UTP20 small subunit (SSU) processome component homolog (yeast) 1.08E-04 4.90E-03 gnas NM_080425 GNAS complex 1.09E-04 4.95E-03 loc402643 XR_015800 tropomyosin 3 pseudogene 1.11E-04 5.03E-03 hk1 NM_033497 hexokinase 1 1.12E-04 5.04E-03 pbrm1 NM_018165 polybromo 1 1.12E-04 5.04E-03 abca12 NM_173076 ATP-binding cassette sub-family A (ABC1) member 12 1.15E-04 5.14E-03 arhgap11a NM_014783 Rho GTPase activating protein 11A 1.15E-04 5.15E-03 topbp1 NM_007027 topoisomerase (DNA) II binding protein 1 1.16E-04 5.18E-03 NM_004735 leucine rich repeat (in FLII) interacting protein 1 1.16E-04 5.18E-03 arhgap18 NM_033515 Rho GTPase activating protein 18 1.18E-04 5.22E-03 ddef2 NM_003887 development and differentiation enhancing factor 2 1.19E-04 5.28E-03 ergic2 NM_016570 ERGIC and golgi 2 1.21E-04 5.34E-03 kntc1 NM_014708 kinetochore associated 1 1.24E-04 5.45E-03 mtpn NM_145808 myotrophin 1.29E-04 5.67E-03 mtf2 NM_007358 metal response element binding transcription factor 2 1.31E-04 5.73E-03 glud2 NM_012084 glutamate dehydrogenase 2 1.31E-04 5.74E-03 fam62a NM_015292 family with sequence similarity 62 (C2 domain containing) member A 1.35E-04 5.89E-03 hsp90aa1 NM_001017963 heat shock protein 90kDa alpha (cytosolic) class A member 1 1.35E-04 5.89E-03 pdgfra NM_006206 platelet-derived growth factor receptor alpha polypeptide 1.40E-04 6.07E-03 tmem1 NM_003274 transmembrane protein 1 1.43E-04 6.17E-03 ttrap NM_016614 TRAF and TNF receptor associated protein 1.45E-04 6.25E-03 styx NM_145251 serine/threonine/tyrosine interacting protein 1.46E-04 6.28E-03 papola NM_032632 poly(A) polymerase alpha 1.50E-04 6.43E-03 phka1 NM_002637 phosphorylase kinase alpha 1 (muscle) 1.51E-04 6.43E-03 kua-uev NM_003349 ubiquitin-conjugating enzyme E2 variant 1 1.50E-04 6.43E-03 eif3s9 NM_001037283 eukaryotic translation initiation factor 3 subunit 9 eta 116kDa 1.51E-04 6.44E-03 dis3l NM_133375 DIS3 mitotic control homolog (S. cerevisiae)-like 1.51E-04 6.44E-03 polr2j2 NM_145325 DNA directed RNA polymerase II polypeptide J-related 1.53E-04 6.48E-03 casc3 NM_007359 cancer susceptibility candidate 3 1.53E-04 6.50E-03 parp4 NM_006437 poly (ADP-ribose) polymerase family member 4 1.54E-04 6.51E-03 atf7ip NM_018179 activating transcription factor 7 interacting protein 1.55E-04 6.52E-03 ctnnal1 NM_003798 catenin (cadherin-associated protein) alpha-like 1 1.56E-04 6.53E-03 ddef1 NM_018482 development and differentiation enhancing factor 1 1.56E-04 6.53E-03 NM_145113 MYC associated factor X 1.56E-04 6.54E-03 vapb NM_004738 VAMP (vesicle-associated membrane protein)-associated protein B and C 1.58E-04 6.57E-03 dkfzp547e087 AL834164 hypothetical gene LOC283846 1.59E-04 6.62E-03 p15rs NM_018170 hypothetical protein FLJ10656 1.61E-04 6.66E-03 bclaf1 NM_001077440 BCL2-associated transcription factor 1 1.63E-04 6.73E-03 prim1 NM_000946 primase polypeptide 1 49kDa 1.66E-04 6.84E-03 arl1 NM_001177 ADP-ribosylation factor-like 1 1.67E-04 6.87E-03 r3hdm1 NM_015361 R3H domain containing 1 1.69E-04 6.93E-03 scc-112 NM_015200 SCC-112 protein 1.70E-04 6.96E-03 ube1c NM_198195 ubiquitin-activating enzyme E1C (UBA3 homolog yeast) 1.77E-04 7.22E-03 ak2 NM_013411 adenylate kinase 2 1.78E-04 7.26E-03 NM_000183 hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A /enoyl-Coenzyme A hydratase (trifunctional protein) beta subunit1.80E-04 7.33E-03 hsd17b4 NM_000414 hydroxysteroid (17-beta) dehydrogenase 4 1.88E-04 7.60E-03 fbxw8 NM_012174 F-box and WD repeat domain containing 8 1.88E-04 7.61E-03 mapre1 NM_012325 microtubule-associated protein RP/EB family member 1 1.87E-04 7.61E-03 kiaa0586 NM_014749 KIAA0586 1.89E-04 7.63E-03 ap4e1 NM_007347 adaptor-related protein complex 4 epsilon 1 subunit 1.91E-04 7.70E-03 usp48 NM_032236 ubiquitin specific peptidase 48 1.93E-04 7.76E-03 c4orf14 NM_032313 chromosome 4 open reading frame 14 1.96E-04 7.87E-03 dync1i2 NM_001378 dynein cytoplasmic 1 intermediate chain 2 2.03E-04 8.10E-03 tnrc6a NM_014494 trinucleotide repeat containing 6A 2.08E-04 8.27E-03 gpbp1 NM_022913 GC-rich promoter binding protein 1 2.09E-04 8.30E-03 tmem123 NM_052932 transmembrane protein 123 2.14E-04 8.47E-03 cryz NM_001889 crystallin zeta (quinone reductase) 2.14E-04 8.49E-03 h3f3b NM_005324 H3 histone family 3B (H3.3B) 2.16E-04 8.55E-03 dnajc7 NM_003315 DnaJ (Hsp40) homolog subfamily C member 7 2.18E-04 8.57E-03 ephb4 NM_004444 EPH receptor B4 2.22E-04 8.70E-03 ywhab NM_003404 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta polypeptide 2.21E-04 8.70E-03 farsb NM_005687 phenylalanyl-tRNA synthetase beta subunit 2.23E-04 8.75E-03 pip5k2a NM_005028 phosphatidylinositol-4-phosphate 5-kinase type II alpha 2.26E-04 8.85E-03 tmem77 BC091509 transmembrane protein 77 2.29E-04 8.93E-03 cox6a1 NM_004373 cytochrome c oxidase subunit VIa polypeptide 1 2.32E-04 9.01E-03 eml4 NM_019063 echinoderm microtubule associated protein like 4 2.37E-04 9.21E-03 NM_014939 KIAA1012 2.41E-04 9.33E-03 cdca7l NM_018719 cell division cycle associated 7-like 2.44E-04 9.42E-03 tmem85 NM_016454 transmembrane protein 85 2.47E-04 9.51E-03 coil NM_004645 coilin 2.55E-04 9.82E-03 mgc87315 XR_015176 hypothetical LOC441250 2.58E-04 9.89E-03