Cats As Predators and Early Domesticates in Ancient Human
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Maladaptation in Feral and Domesticated Animals
Nova Southeastern University NSUWorks Biology Faculty Articles Department of Biological Sciences 8-2019 Maladaptation in Feral and Domesticated Animals Eben Gering Michigan State University, [email protected] Darren Incorvaia Michigan State University R. Henriksen Linkoping University- Sweden Dominic Wright Linkoping University- Sweden Follow this and additional works at: https://nsuworks.nova.edu/cnso_bio_facarticles Part of the Biology Commons NSUWorks Citation Gering, Eben; Darren Incorvaia; R. Henriksen; and Dominic Wright. 2019. "Maladaptation in Feral and Domesticated Animals." Evolutionary Applications 12, (7): 1274-1286. doi:10.1111/eva.12784. This Article is brought to you for free and open access by the Department of Biological Sciences at NSUWorks. It has been accepted for inclusion in Biology Faculty Articles by an authorized administrator of NSUWorks. For more information, please contact [email protected]. Received: 17 October 2018 | Revised: 10 January 2019 | Accepted: 7 February 2019 DOI: 10.1111/eva.12784 SPECIAL ISSUE REVIEW AND SYNTHESES Maladaptation in feral and domesticated animals Eben Gering1 | Darren Incorvaia1 | Rie Henriksen2 | Dominic Wright2 | Thomas Getty1 1Department of Integrative Biology and Ecology, Evolutionary Biology, and Behavior Abstract Program, Michigan State University, East Selection regimes and population structures can be powerfully changed by domesti‐ Lansing, Michigan cation and feralization, and these changes can modulate animal fitness in both cap‐ 2IIFM Biology and AVIAN Behavioural Genomics and Physiology Group, Linköping tive and natural environments. In this review, we synthesize recent studies of these University, Sweden two processes and consider their impacts on organismal and population fitness. Correspondence Domestication and feralization offer multiple windows into the forms and mecha‐ Eben Gering, Department of Integrative nisms of maladaptation. -
The Evolution of Animal Domestication
See discussions, stats, and author profiles for this publication at: https://www.researchgate.net/publication/266740619 The Evolution of Animal Domestication Article in Annual Review of Ecology Evolution and Systematics · October 2014 DOI: 10.1146/annurev-ecolsys-120213-091620 CITATIONS READS 179 3,162 2 authors: Greger Larson Dorian Q Fuller University of Oxford University College London 196 PUBLICATIONS 6,523 CITATIONS 322 PUBLICATIONS 12,021 CITATIONS SEE PROFILE SEE PROFILE Some of the authors of this publication are also working on these related projects: Dog Domestication View project Rwandan Archaeology View project All content following this page was uploaded by Dorian Q Fuller on 12 October 2014. The user has requested enhancement of the downloaded file. ES45CH06-Larson ARI 16 September 2014 11:18 V I E E W R S I E N C N A D V A The Evolution of Animal Domestication Greger Larson1 and Dorian Q. Fuller2 1Durham Evolution and Ancient DNA, Department of Archaeology, Durham University, Durham, DH1 3LE, United Kingdom; email: [email protected] 2Institute of Archaeology, University College London, London WC1H 0PY, United Kingdom Annu. Rev. Ecol. Evol. Syst. 2014. 66:115–36 Keywords The Annual Review of Ecology, Evolution, and archaeology, genetics, livestock, introgression, selection, agriculture Systematics is online at ecolsys.annualreviews.org This article’s doi: Abstract 10.1146/annurev-ecolsys-120213-091620 The domestication of plants and animals over the past 11,500 years has Copyright c 2014 by Annual Reviews. had a significant effect not just on the domesticated taxa but also on human All rights reserved evolution and on the biosphere as a whole. -
The History of Farm Foxes Undermines the Animal Domestication Syndrome, Trends in Ecology & Evolution (2019)
Please cite this article in press as: Lord et al., The History of Farm Foxes Undermines the Animal Domestication Syndrome, Trends in Ecology & Evolution (2019), https://doi.org/10.1016/j.tree.2019.10.011 Trends in Ecology & Evolution Opinion The History of Farm Foxes Undermines the Animal Domestication Syndrome Kathryn A. Lord,1,2 Greger Larson,3,@ Raymond P. Coppinger,4,6 and Elinor K. Karlsson1,2,5,@,* The Russian Farm-Fox Experiment is the best known experimental study in animal domestication. Highlights By subjecting a population of foxes to selection for tameness alone, Dimitry Belyaev generated The ‘domestication syndrome’ has foxes that possessed a suite of characteristics that mimicked those found across domesticated been a central focus of research species. This ‘domestication syndrome’ has been a central focus of research into the biological into the biological processes un- pathways modified during domestication. Here, we chart the origins of Belyaev’s foxes in derlying domestication. The eastern Canada and critically assess the appearance of domestication syndrome traits across an- Russian Farm-Fox Experiment was imal domesticates. Our results suggest that both the conclusions of the Farm-Fox Experiment the first to test whether there is a and the ubiquity of domestication syndrome have been overstated. To understand the process causal relationship between selec- tion for tameness and the domes- of domestication requires a more comprehensive approach focused on essential adaptations to tication syndrome. human-modified environments. Historical records and genetic The Origins of Domestication Syndrome analysis show that the foxes used in The domestication syndrome describes a suite of behavioral and morphological characteristics the Farm-Fox Experiment origi- consistently observed in domesticated populations. -
First Wave of Cultivators Spread to Cyprus at Least 10,600 Y Ago
First wave of cultivators spread to Cyprus at least 10,600 y ago Jean-Denis Vignea,1, François Brioisb, Antoine Zazzoa, George Willcoxc, Thomas Cucchia,d, Stéphanie Thiébaulta, Isabelle Carrèreb, Yodrik Franele, Régis Touquete, Chloé Martina, Christophe Moreauf, Clothilde Combyf, and Jean Guilaineb aUnité Mixte de Recherche (UMR) 7209, Archéozoologie, Archéobotanique: Sociétés, Pratiques et Environnements, Centre National de la Recherche Scientifique, Muséum National d’Histoire Naturelle, CP 56, F-75005 Paris, France; bUMR 5608, Travaux et Recherches Archéologiques sur les Cultures, les Espaces et les Sociétés (TRACES), Centre de Recherches sur la Préhistoire et la Protohistoire de la Méditerranée, Ecole des Hautes Etudes en Sciences Sociales, Université Toulouse Le Mirail, Centre National de la Recherche Scientifique, F-31000 Toulouse, France; cUMR 5133, Environnement et Sociétés de l’Orient Ancien, Archéorient, Centre National de la Recherche Scientifique, Université Lumière Lyon 2, F-69365 Lyon, France; dDepartment of Archaeology, Aberdeen University, Aberdeen AB24 3UF, United Kingdom; eCentre-Île-de-France, Institut National de Recherches Archéologiques Préventives (INRAP), F-75008 Paris, France; and fUnité Mixte de Service (UMS) 2572, Laboratoire de Mesure du Carbone 14, Commissariat à l’Energie Atomique et aux Energies Alternatives Saclay, Centre National de la Recherche Scientifique, Institut de Recherche pour le Développement, Institut de Radioprotection et de Sûreté Nucléaire, Ministère de la Culture et de la Communication, F-91191 Gif-sur-Yvette, France Edited* by Ofer Bar-Yosef, Harvard University, Cambridge, MA, and approved April 6, 2012 (received for review February 1, 2012) Early Neolithic sedentary villagers started cultivating wild cereals in villagers several centuries earlier than suspected, a phenomenon the Near East 11,500 y ago [Pre-Pottery Neolithic A (PPNA)]. -
UNIVERSITY of CALIFORNIA Los Angeles the Evolution of Animals Through Domestication and Other Human Relationships
UNIVERSITY OF CALIFORNIA Los Angeles The Evolution of Animals through Domestication and other Human Relationships: An Animal-Centered Approach A thesis submitted in partial satisfaction of the requirements for the degree Master of Arts in Anthropology by Steven Michael Ammerman 2017 ©Copyright by Steven Michael Ammerman 2017 ABSTRACT OF THE THESIS The Evolution of Animals through Domestication and other Human Relationships: An Animal-Centered Approach by Steven Michael Ammerman Master of Arts in Anthropology University of California, Los Angeles, 2017 Professor Monica L. Smith, Chair As a component of the environment themselves, humans maintain a mutualistic modifying process with that environment. The interaction between humans and animals has led to different categories of relationships—commensal animals, tame animals, domesticated animals, and feral animals. In the study of human-animal interactions, the foremost consideration is how the niche construction of humans affects the evolutionary trajectory of other animals, but other animals also construct niches within this human-impacted environment to enhance their survival. The concept of niche construction provides a useful way of thinking about how humans and animals interact in the environment because this concept considers physical changes, behavioral changes, and cultural changes. In an animal-centered approach, consideration of how the traits and actions of animals play an active role in allowing and encouraging their ongoing relationships with humans is just as important as the consideration of actions of humans. ii The thesis of Steven Michael Ammerman is approved. Nancy E. Levine P. Jeffrey Brantingham Monica L. Smith, Committee Chair University of California, Los Angeles 2017 iii Table of Contents 1. -
Domestication and Early Agriculture in the Mediterranean Basin: Origins, Diffusion, and Impact
PERSPECTIVE Domestication and early agriculture in the Mediterranean Basin: Origins, diffusion, and impact Melinda A. Zeder* Archaeobiology Program, National Museum of Natural History, Smithsonian Institution, Washington, DC 20013 Edited by Jeremy A. Sabloff, University of Pennsylvania Museum of Archaeology and Anthropology, Philadelphia, PA, and approved May 27, 2008 (received for review March 20, 2008) The past decade has witnessed a quantum leap in our understanding of the origins, diffusion, and impact of early agriculture in the Mediterranean Basin. In large measure these advances are attributable to new methods for documenting domestication in plants and animals. The initial steps toward plant and animal domestication in the Eastern Mediterranean can now be pushed back to the 12th millennium cal B.P. Evidence for herd management and crop cultivation appears at least 1,000 years earlier than the morphological changes traditionally used to document domestication. Different species seem to have been domesticated in different parts of the Fertile Crescent, with genetic analyses detecting multiple domestic lineages for each species. Recent evidence suggests that the ex- pansion of domesticates and agricultural economies across the Mediterranean was accomplished by several waves of seafaring colonists who established coastal farming enclaves around the Mediterranean Basin. This process also involved the adoption of do- mesticates and domestic technologies by indigenous populations and the local domestication of some endemic species. Human envi- ronmental impacts are seen in the complete replacement of endemic island faunas by imported mainland fauna and in today’s anthropogenic, but threatened, Mediterranean landscapes where sustainable agricultural practices have helped maintain high bio- diversity since the Neolithic. -
Origin of the Egyptian Domestic Cat
UPTEC X 12 012 Examensarbete 30 hp Juni 2012 Origin of the Egyptian Domestic Cat Carolin Johansson Molecular Biotechnology Programme Uppsala University School of Engineering UPTEC X 12 012 Date of issue 2012-06 Author Carolin Johansson Title (English) Origin of the Egyptian Domestic Cat Title (Swedish) Abstract This study presents mitochondrial genome sequences from 22 Egyptian house cats with the aim of resolving the uncertain origin of the contemporary world-wide population of Domestic cats. Together with data from earlier studies it has been possible to confirm some of the previously suggested haplotype identifications and phylogeny of the Domestic cat lineage. Moreover, by applying a molecular clock, it is proposed that the Domestic cat lineage has experienced several expansions representing domestication and/or breeding in pre-historical and historical times, seemingly in concordance with theories of a domestication origin in the Neolithic Middle East and in Pharaonic Egypt. In addition, the present study also demonstrates the possibility of retrieving long polynucleotide sequences from hair shafts and a time-efficient way to amplify a complete feline mitochondrial genome. Keywords Feline domestication, cat in ancient Egypt, mitochondrial genome, Felis silvestris libyca Supervisors Anders Götherström Uppsala University Scientific reviewer Jan Storå Stockholm University Project name Sponsors Language Security English Classification ISSN 1401-2138 Supplementary bibliographical information Pages 123 Biology Education Centre Biomedical Center Husargatan 3 Uppsala Box 592 S-75124 Uppsala Tel +46 (0)18 4710000 Fax +46 (0)18 471 4687 Origin of the Egyptian Domestic Cat Carolin Johansson Populärvetenskaplig sammanfattning Det är inte sedan tidigare känt exakt hur, när och var tamkatten domesticerades. -
Paleogenomics of Animal Domestication
Paleogenomics of Animal Domestication Evan K. Irving-Pease, Hannah Ryan, Alexandra Jamieson, Evangelos A. Dimopoulos, Greger Larson, and Laurent A. F. Frantz Abstract Starting with dogs, over 15,000 years ago, the domestication of animals has been central in the development of modern societies. Because of its importance for a range of disciplines – including archaeology, biology and the humanities – domestication has been studied extensively. This chapter reviews how the field of paleogenomics has revolutionised, and will continue to revolutionise, our under- standing of animal domestication. We discuss how the recovery of ancient DNA from archaeological remains is allowing researchers to overcome inherent shortcom- ings arising from the analysis of modern DNA alone. In particular, we show how DNA, extracted from ancient substrates, has proven to be a crucial source of information to reconstruct the geographic and temporal origin of domestic species. We also discuss how ancient DNA is being used by geneticists and archaeologists to directly observe evolutionary changes linked to artificial and natural selection to generate a richer understanding of this fascinating process. Keywords Ancient DNA · Archaeology · Domestication · Entomology · Evolution · Genomics · Zoology E. K. Irving-Pease (*) · H. Ryan · A. Jamieson · E. A. Dimopoulos · G. Larson The Palaeogenomics and Bio-Archaeology Research Network, Research Laboratory for Archaeology and History of Art, University of Oxford, Oxford, UK e-mail: [email protected] L. A. F. Frantz (*) The Palaeogenomics and Bio-Archaeology Research Network, Research Laboratory for Archaeology and History of Art, University of Oxford, Oxford, UK School of Biological and Chemical Sciences, Queen Mary University of London, London, UK e-mail: [email protected] Charlotte Lindqvist and Om P. -
Genetics and Animal Domestication: New Windows on an Elusive Process K
Journal of Zoology. Print ISSN 0952-8369 Genetics and animal domestication: new windows on an elusive process K. Dobney1 & G. Larson2 1 Department of Archaeology, University of Durham, Durham, UK 2 Department of Zoology, Henry Wellcome Ancient Biomolecules Centre, University of Oxford, UK Keywords Abstract domestication; genetics; phylogeography; molecular clocks; paedomorphosis. Domesticated animals are universally familiar. How, when, where and why they became domesticated is less well understood. The genetic revolution of the past few Correspondence decades has facilitated novel insights into a field that previously was principally the Greger Larson, Department of Zoology, domain of archaeozoologists. Although some of the conclusions drawn from Henry Wellcome Ancient Biomolecules genetic data have proved to be contentious, many studies have significantly altered Centre, University of Oxford, South Parks or refined our understanding of past human animal relationships. This review Road OX1 3PS, UK seeks not only to discuss the wider concerns and ramifications of genetic Email: [email protected] approaches to the study of animal domestication but also to provide a broader theoretical framework for understanding the process itself. More specifically, we Received 6 July 2005; accepted 8 September discuss issues related to the terminology associated with domestication, the 2005 possibility of domestication genes, and the promise and problems of genetics to answer the fundamental questions associated with domestication. doi:10.1111/j.1469-7998.2006.00042.x Introduction Defining domestication Over the past 10 000 years, human history has been wholly Terminology typically used in domestication studies, including transformed by the domestication of plants and animals. the word ‘domestication’ itself, is often confusing and poorly Although the term ‘domestic animal’ has universal meaning, defined. -
Assessment of Water Absorption Capacity and Cooking Time of Wild Under-Exploited Vigna Species Towards Their Domestication
agronomy Article Assessment of Water Absorption Capacity and Cooking Time of Wild Under-Exploited Vigna Species towards their Domestication Difo Voukang Harouna 1,2 , Pavithravani B. Venkataramana 2,3, Athanasia O. Matemu 1 and Patrick Alois Ndakidemi 2,3,* 1 Department of Food Biotechnology and Nutritional Sciences, Nelson Mandela African Institution of Science and Technology (NM-AIST), Arusha P.O. Box 447, Tanzania 2 Centre for Research, Agricultural Advancement, Teaching Excellence and Sustainability in Food and Nutrition Security (CREATES-FNS), Nelson Mandela African Institution of Science and Technology, Arusha P.O. Box 447, Tanzania 3 Department of Sustainable Agriculture, Biodiversity and Ecosystems Management, Nelson Mandela African Institution of Science and Technology, Arusha P.O. Box 447, Tanzania * Correspondence: [email protected]; Tel.: +255-757-744-772 Received: 16 July 2019; Accepted: 26 August 2019; Published: 4 September 2019 Abstract: Some phenotypic traits from wild legumes are relatively less examined and exploited towards their domestication and improvement. Cooking time for instance, is one of the most central factors that direct a consumer’s choice for a food legume. However, such characters, together with seed water absorption capacity are less examined by scientists, especially in wild legumes. Therefore, this study explores the cooking time and the water absorption capacity upon soaking on 84 accessions of wild Vigna legumes and establishes a relationship between their cooking time and water absorbed during soaking for the very first time. The accessions were grown in two agro-ecological zones and used in this study. The Mattson cooker apparatus was used to determine the cooking time of each accession and 24 h soaking was performed to evaluate water absorbed by each accession. -
Animal Domestication in the Era of Ancient Genomics Laurent Frantz, Daniel Bradley, Greger Larson, Ludovic Orlando
Animal domestication in the era of ancient genomics Laurent Frantz, Daniel Bradley, Greger Larson, Ludovic Orlando To cite this version: Laurent Frantz, Daniel Bradley, Greger Larson, Ludovic Orlando. Animal domestication in the era of ancient genomics. Nature Reviews Genetics, Nature Publishing Group, 2020, 21 (8), pp.449-460. 10.1038/s41576-020-0225-0. hal-03030302 HAL Id: hal-03030302 https://hal.archives-ouvertes.fr/hal-03030302 Submitted on 30 Nov 2020 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Animal domestication in the era of ancient genomics Laurent A. F. Frantz1†, Daniel G. Bradley2, Greger Larson3 and Ludovic Orlando4,5† 1 School of Biological and Chemical Sciences, Queen Mary University of London, London, UK. 2 Smurfit Institute of Genetics, Trinity College Dublin, Dublin, Ireland 3 The Palaeogenomics & Bio-Archaeology Research Network, Research Laboratory for Archaeology and History of Art, The University of Oxford, Oxford, UK. 4 Laboratoire d’Anthropobiologie Moléculaire et d’Imagerie de Synthèse, CNRS UMR 5288, Université de Toulouse, -
Domestication Syndrome” in Mammals: a Unified Explanation Based on Neural Crest Cell Behavior and Genetics
HIGHLIGHTED ARTICLE PERSPECTIVES The “Domestication Syndrome” in Mammals: A Unified Explanation Based on Neural Crest Cell Behavior and Genetics Adam S. Wilkins,*,†,1 Richard W. Wrangham,*,‡ and W. Tecumseh Fitch§ *Stellenbosch Institute of Advanced Study, Stellenbosch 7600, South Africa, †Institute of Theoretical Biology, Humboldt University zu Berlin, Berlin 10115, Germany, ‡Department of Human Evolutionary Biology, Harvard University, Cambridge, Massachusetts 02138, and §Department of Cognitive Biology, University of Vienna, A-1090 Vienna, Austria ABSTRACT Charles Darwin, while trying to devise a general theory of heredity from the observations of animal and plant breeders, discovered that domesticated mammals possess a distinctive and unusual suite of heritable traits not seen in their wild progenitors. Some of these traits also appear in domesticated birds and fish. The origin of Darwin’s “domestication syndrome” has remained a conundrum for more than 140 years. Most explanations focus on particular traits, while neglecting others, or on the possible selective factors involved in domestication rather than the underlying developmental and genetic causes of these traits. Here, we propose that the domestication syndrome results predominantly from mild neural crest cell deficits during embryonic development. Most of the modified traits, both morphological and physiological, can be readily explained as direct consequences of such deficiencies, while other traits are explicable as indirect consequences. We first show how the hypothesis can account for the multiple, apparently unrelated traits of the syndrome and then explore its genetic dimensions and predictions, reviewing the available genetic evidence. The article concludes with a brief discussion of some genetic and developmental questions raised by the idea, along with specific predictions and experimental tests.