Maladaptation in Feral and Domesticated Animals
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The Evolution of Animal Domestication
See discussions, stats, and author profiles for this publication at: https://www.researchgate.net/publication/266740619 The Evolution of Animal Domestication Article in Annual Review of Ecology Evolution and Systematics · October 2014 DOI: 10.1146/annurev-ecolsys-120213-091620 CITATIONS READS 179 3,162 2 authors: Greger Larson Dorian Q Fuller University of Oxford University College London 196 PUBLICATIONS 6,523 CITATIONS 322 PUBLICATIONS 12,021 CITATIONS SEE PROFILE SEE PROFILE Some of the authors of this publication are also working on these related projects: Dog Domestication View project Rwandan Archaeology View project All content following this page was uploaded by Dorian Q Fuller on 12 October 2014. The user has requested enhancement of the downloaded file. ES45CH06-Larson ARI 16 September 2014 11:18 V I E E W R S I E N C N A D V A The Evolution of Animal Domestication Greger Larson1 and Dorian Q. Fuller2 1Durham Evolution and Ancient DNA, Department of Archaeology, Durham University, Durham, DH1 3LE, United Kingdom; email: [email protected] 2Institute of Archaeology, University College London, London WC1H 0PY, United Kingdom Annu. Rev. Ecol. Evol. Syst. 2014. 66:115–36 Keywords The Annual Review of Ecology, Evolution, and archaeology, genetics, livestock, introgression, selection, agriculture Systematics is online at ecolsys.annualreviews.org This article’s doi: Abstract 10.1146/annurev-ecolsys-120213-091620 The domestication of plants and animals over the past 11,500 years has Copyright c 2014 by Annual Reviews. had a significant effect not just on the domesticated taxa but also on human All rights reserved evolution and on the biosphere as a whole. -
The History of Farm Foxes Undermines the Animal Domestication Syndrome, Trends in Ecology & Evolution (2019)
Please cite this article in press as: Lord et al., The History of Farm Foxes Undermines the Animal Domestication Syndrome, Trends in Ecology & Evolution (2019), https://doi.org/10.1016/j.tree.2019.10.011 Trends in Ecology & Evolution Opinion The History of Farm Foxes Undermines the Animal Domestication Syndrome Kathryn A. Lord,1,2 Greger Larson,3,@ Raymond P. Coppinger,4,6 and Elinor K. Karlsson1,2,5,@,* The Russian Farm-Fox Experiment is the best known experimental study in animal domestication. Highlights By subjecting a population of foxes to selection for tameness alone, Dimitry Belyaev generated The ‘domestication syndrome’ has foxes that possessed a suite of characteristics that mimicked those found across domesticated been a central focus of research species. This ‘domestication syndrome’ has been a central focus of research into the biological into the biological processes un- pathways modified during domestication. Here, we chart the origins of Belyaev’s foxes in derlying domestication. The eastern Canada and critically assess the appearance of domestication syndrome traits across an- Russian Farm-Fox Experiment was imal domesticates. Our results suggest that both the conclusions of the Farm-Fox Experiment the first to test whether there is a and the ubiquity of domestication syndrome have been overstated. To understand the process causal relationship between selec- tion for tameness and the domes- of domestication requires a more comprehensive approach focused on essential adaptations to tication syndrome. human-modified environments. Historical records and genetic The Origins of Domestication Syndrome analysis show that the foxes used in The domestication syndrome describes a suite of behavioral and morphological characteristics the Farm-Fox Experiment origi- consistently observed in domesticated populations. -
Understanding Maladaptation by Uniting Ecological and Evolutionary Perspectives*
vol. 194, no. 4 the american naturalist october 2019 Special Feature on Maladaptation Understanding Maladaptation by Uniting Ecological and Evolutionary Perspectives* Steven P. Brady,1,† Daniel I. Bolnick,2 Rowan D. H. Barrett,3,4,5 Lauren Chapman,3,5 Erika Crispo,6 Alison M. Derry,5,7 Christopher G. Eckert,8 Dylan J. Fraser,5,9 Gregor F. Fussmann,3,5 Andrew Gonzalez,3,5 Frederic Guichard,3,5 Thomas Lamy,10,11 Jeffrey Lane,12 Andrew G. McAdam,13 Amy E. M. Newman,13 Antoine Paccard,14 Bruce Robertson,15 Gregor Rolshausen,16 Patricia M. Schulte,17 Andrew M. Simons,18 Mark Vellend,5,19 and Andrew Hendry3,4,5 1. Biology Department, Southern Connecticut State University, New Haven, Connecticut 06515; 2. Department of Ecology and Evolutionary Biology, University of Connecticut, Storrs, Connecticut 06269; 3. Department of Biology, McGill University, Montreal, Quebec H3A 1B1, Canada; 4. Redpath Museum, McGill University, Montreal, Quebec H3A 0C4, Canada; 5. Quebec Centre for Biodiversity Science, Stewart Biology, McGill University, Montreal, Quebec H3A 1B1, Canada; 6. Biology Department, Pace University, New York, New York 10038; 7. Département des sciences biologiques, Université du Québec à Montréal, Montreal, Quebec H2X 1Y4, Canada; 8. Department of Biology, Queen’s University, Kingston, Ontario K7L 3N6, Canada; 9. Department of Biology, Concordia University, Montreal, Qeubec H4B 1R6, Canada; 10. Département de sciences biologiques, Université de Montréal, Montreal, Quebec H2V 2S9, Canada; 11. Marine Science Institute, University of California, Santa Barbara, California 93106; 12. Department of Biology, University of Saskatchewan, Saskatoon, Saskatchewan S7N 5C8, Canada; 13. Department of Integrative Biology, University of Guelph, Guelph, Ontario N1G 2W1, Canada; 14. -
UNIVERSITY of CALIFORNIA Los Angeles the Evolution of Animals Through Domestication and Other Human Relationships
UNIVERSITY OF CALIFORNIA Los Angeles The Evolution of Animals through Domestication and other Human Relationships: An Animal-Centered Approach A thesis submitted in partial satisfaction of the requirements for the degree Master of Arts in Anthropology by Steven Michael Ammerman 2017 ©Copyright by Steven Michael Ammerman 2017 ABSTRACT OF THE THESIS The Evolution of Animals through Domestication and other Human Relationships: An Animal-Centered Approach by Steven Michael Ammerman Master of Arts in Anthropology University of California, Los Angeles, 2017 Professor Monica L. Smith, Chair As a component of the environment themselves, humans maintain a mutualistic modifying process with that environment. The interaction between humans and animals has led to different categories of relationships—commensal animals, tame animals, domesticated animals, and feral animals. In the study of human-animal interactions, the foremost consideration is how the niche construction of humans affects the evolutionary trajectory of other animals, but other animals also construct niches within this human-impacted environment to enhance their survival. The concept of niche construction provides a useful way of thinking about how humans and animals interact in the environment because this concept considers physical changes, behavioral changes, and cultural changes. In an animal-centered approach, consideration of how the traits and actions of animals play an active role in allowing and encouraging their ongoing relationships with humans is just as important as the consideration of actions of humans. ii The thesis of Steven Michael Ammerman is approved. Nancy E. Levine P. Jeffrey Brantingham Monica L. Smith, Committee Chair University of California, Los Angeles 2017 iii Table of Contents 1. -
Paleogenomics of Animal Domestication
Paleogenomics of Animal Domestication Evan K. Irving-Pease, Hannah Ryan, Alexandra Jamieson, Evangelos A. Dimopoulos, Greger Larson, and Laurent A. F. Frantz Abstract Starting with dogs, over 15,000 years ago, the domestication of animals has been central in the development of modern societies. Because of its importance for a range of disciplines – including archaeology, biology and the humanities – domestication has been studied extensively. This chapter reviews how the field of paleogenomics has revolutionised, and will continue to revolutionise, our under- standing of animal domestication. We discuss how the recovery of ancient DNA from archaeological remains is allowing researchers to overcome inherent shortcom- ings arising from the analysis of modern DNA alone. In particular, we show how DNA, extracted from ancient substrates, has proven to be a crucial source of information to reconstruct the geographic and temporal origin of domestic species. We also discuss how ancient DNA is being used by geneticists and archaeologists to directly observe evolutionary changes linked to artificial and natural selection to generate a richer understanding of this fascinating process. Keywords Ancient DNA · Archaeology · Domestication · Entomology · Evolution · Genomics · Zoology E. K. Irving-Pease (*) · H. Ryan · A. Jamieson · E. A. Dimopoulos · G. Larson The Palaeogenomics and Bio-Archaeology Research Network, Research Laboratory for Archaeology and History of Art, University of Oxford, Oxford, UK e-mail: [email protected] L. A. F. Frantz (*) The Palaeogenomics and Bio-Archaeology Research Network, Research Laboratory for Archaeology and History of Art, University of Oxford, Oxford, UK School of Biological and Chemical Sciences, Queen Mary University of London, London, UK e-mail: [email protected] Charlotte Lindqvist and Om P. -
Animal Domestication in the Era of Ancient Genomics Laurent Frantz, Daniel Bradley, Greger Larson, Ludovic Orlando
Animal domestication in the era of ancient genomics Laurent Frantz, Daniel Bradley, Greger Larson, Ludovic Orlando To cite this version: Laurent Frantz, Daniel Bradley, Greger Larson, Ludovic Orlando. Animal domestication in the era of ancient genomics. Nature Reviews Genetics, Nature Publishing Group, 2020, 21 (8), pp.449-460. 10.1038/s41576-020-0225-0. hal-03030302 HAL Id: hal-03030302 https://hal.archives-ouvertes.fr/hal-03030302 Submitted on 30 Nov 2020 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Animal domestication in the era of ancient genomics Laurent A. F. Frantz1†, Daniel G. Bradley2, Greger Larson3 and Ludovic Orlando4,5† 1 School of Biological and Chemical Sciences, Queen Mary University of London, London, UK. 2 Smurfit Institute of Genetics, Trinity College Dublin, Dublin, Ireland 3 The Palaeogenomics & Bio-Archaeology Research Network, Research Laboratory for Archaeology and History of Art, The University of Oxford, Oxford, UK. 4 Laboratoire d’Anthropobiologie Moléculaire et d’Imagerie de Synthèse, CNRS UMR 5288, Université de Toulouse, -
Translocation of an Arctic Seashore Plant Reveals Signs of Maladaptation to Altered Climatic
bioRxiv preprint doi: https://doi.org/10.1101/2020.05.22.109868. this version posted May 23, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. It is made available under a CC-BY 4.0 International license. 1 Translocation of an arctic seashore plant reveals signs of maladaptation to altered climatic 2 conditions 3 4 Hällfors M.H.*a,b, Lehvävirta S. a,c, Aandahl T.R.d, Lehtimäki I.-M.a, Nilsson L.O. d,e, 5 Ruotsalainen A.L.f, Schulman L.E.a, Hyvärinen M.-T.a 6 7 a Botany Unit, Finnish Museum of Natural History, P.O. Box 7, FI-00014 University of Helsinki, 8 Finland. 9 b Research Centre for Environmental Change, Organismal and Evolutionary Biology Research 10 Programme, Faculty of Biological and Environmental Sciences, P.O. Box 65, FI-00014 11 University of Helsinki, Finland. 12 c Department of Landscape Architecture, Planning and Management, Swedish University of 13 Agricultural Sciences, Alnarp, Sweden 14 d Division of Environment and Natural Resources, Norwegian Institute of Bioeconomy Research 15 (NIBIO), P.O. Box 115, NO-1431 Ås, Norway. 16 e Halmstad University, PO Box 823, SE-30118 Halmstad, Sweden. 17 f Department of Ecology and Genetics, P.O. Box 3000, FI-90014 University of Oulu, Finland. 18 19 * corresponding author. Contact information: Maria Hällfors, Research Centre for Environmental 20 Change, Organismal and Evolutionary Biology Research Programme, Faculty of Biological and 21 Environmental Sciences, P.O. Box 65, FI-00014 University of Helsinki, Finland, e-mail: 22 [email protected]; phone: +358 40 721 34 74 23 1 bioRxiv preprint doi: https://doi.org/10.1101/2020.05.22.109868. -
Assisted Gene Flow to Facilitate Local Adaptation to Climate Change
ES44CH18-Aitken ARI 21 October 2013 21:12 Assisted Gene Flow to Facilitate Local Adaptation to Climate Change Sally N. Aitken1,2 and Michael C. Whitlock3 1Department of Forest and Conservation Sciences, 2Center for Forest Conservation Genetics, and 3Department of Zoology, University of British Columbia, Vancouver, British Columbia V6T 1Z4, Canada; email: [email protected] Annu. Rev. Ecol. Evol. Syst. 2013. 44:367–88 Keywords First published online as a Review In Advance on assisted migration, evolutionary rescue, genetic rescue, outbreeding September 23, 2013 depression, phenotypic plasticity, seed transfer, ecological restoration, The Annual Review of Ecology, Evolution, and reforestation, facilitated adaptation Systematics is online at ecolsys.annualreviews.org This article’s doi: Abstract by University of British Columbia on 12/17/13. For personal use only. 10.1146/annurev-ecolsys-110512-135747 Assisted gene flow (AGF) between populations has the potential to mitigate Copyright c 2013 by Annual Reviews. maladaptation due to climate change. However, AGF may cause outbreed- All rights reserved ing depression (especially if source and recipient populations have been long Annu. Rev. Ecol. Evol. Syst. 2013.44:367-388. Downloaded from www.annualreviews.org isolated) and may disrupt local adaptation to nonclimatic factors. Selection should eliminate extrinsic outbreeding depression due to adaptive differences in large populations, and simulations suggest that, within a few generations, evolution should resolve mild intrinsic outbreeding depression due to epista- sis. To weigh the risks of AGF against those of maladaptation due to climate change, we need to know the species’ extent of local adaptation to climate and other environmental factors, as well as its pattern of gene flow. -
Domestication Syndrome” in Mammals: a Unified Explanation Based on Neural Crest Cell Behavior and Genetics
HIGHLIGHTED ARTICLE PERSPECTIVES The “Domestication Syndrome” in Mammals: A Unified Explanation Based on Neural Crest Cell Behavior and Genetics Adam S. Wilkins,*,†,1 Richard W. Wrangham,*,‡ and W. Tecumseh Fitch§ *Stellenbosch Institute of Advanced Study, Stellenbosch 7600, South Africa, †Institute of Theoretical Biology, Humboldt University zu Berlin, Berlin 10115, Germany, ‡Department of Human Evolutionary Biology, Harvard University, Cambridge, Massachusetts 02138, and §Department of Cognitive Biology, University of Vienna, A-1090 Vienna, Austria ABSTRACT Charles Darwin, while trying to devise a general theory of heredity from the observations of animal and plant breeders, discovered that domesticated mammals possess a distinctive and unusual suite of heritable traits not seen in their wild progenitors. Some of these traits also appear in domesticated birds and fish. The origin of Darwin’s “domestication syndrome” has remained a conundrum for more than 140 years. Most explanations focus on particular traits, while neglecting others, or on the possible selective factors involved in domestication rather than the underlying developmental and genetic causes of these traits. Here, we propose that the domestication syndrome results predominantly from mild neural crest cell deficits during embryonic development. Most of the modified traits, both morphological and physiological, can be readily explained as direct consequences of such deficiencies, while other traits are explicable as indirect consequences. We first show how the hypothesis can account for the multiple, apparently unrelated traits of the syndrome and then explore its genetic dimensions and predictions, reviewing the available genetic evidence. The article concludes with a brief discussion of some genetic and developmental questions raised by the idea, along with specific predictions and experimental tests. -
Evolving Theories of Behaviour
Evolutionary psychology Evolving theories of behaviour VER a relatively short period of time evolutionary psychology O has become a prominent way of understanding the human mind and behaviour. Its origins lie in a number of JOHN ARCHER describes a rich research agenda for theoretical analyses of animal behaviour in the 1960s and early 1970s which evolutionary psychology in testing novel hypotheses. transformed the way this subject was studied and understood. Just as the often provide new ways of viewing existing discipline at the time. Conventional social evolutionary approach led ethologists phenomena, and therefore aid overall psychology assumes that human behaviour away from concentrating on the immediate understanding of psychological can be explained in terms of culture-specific causal mechanisms controlling animal phenomena, but the speculations social learning, with relatively little behaviour, so evolutionary psychology themselves may be difficult to test contribution from evolved dispositions seeks to lead conventional psychologists empirically. to act in particular ways. In contrast, away from explanations that concentrate These considerations apply to one evolutionary psychology involves thinking only on immediate mechanisms and mental strand of evolutionary thinking, that about human beings in ways that generate events. Instead it offers a single unifying concerned with the origins of present-day novel testable hypotheses that would have starting point for understanding why we behaviour, and its original adaptive been beyond the scope of conventional think and behave as we do today: natural significance. Consideration of adaptive social science thinking (provocatively selection has made us this way. significance is (as the pioneering ethologist referred to as the SSSM or standard social This simple statement hides a number Niko Tinbergen (1963) pointed out) science model by Tooby & Cosmides, 1992). -
What's Wrong with Evolutionary Biology?
Biol Philos (2017) 32:263–279 DOI 10.1007/s10539-016-9557-8 What’s wrong with evolutionary biology? John J. Welch1 Received: 10 June 2016 / Accepted: 2 December 2016 / Published online: 20 December 2016 Ó The Author(s) 2016. This article is published with open access at Springerlink.com Abstract There have been periodic claims that evolutionary biology needs urgent reform, and this article tries to account for the volume and persistence of this discontent. It is argued that a few inescapable properties of the field make it prone to criticisms of predictable kinds, whether or not the criticisms have any merit. For example, the variety of living things and the complexity of evolution make it easy to generate data that seem revolutionary (e.g. exceptions to well-established general- izations, or neglected factors in evolution), and lead to disappointment with existing explanatory frameworks (with their high levels of abstraction, and limited predictive power). It is then argued that special discontent stems from misunderstandings and dislike of one well-known but atypical research programme: the study of adaptive function, in the tradition of behavioural ecology. To achieve its goals, this research needs distinct tools, often including imaginary agency, and a partial description of the evolutionary process. This invites mistaken charges of narrowness and over- simplification (which come, not least, from researchers in other subfields), and these chime with anxieties about human agency and overall purpose. The article ends by discussing several ways in which calls to reform evolutionary biology actively hinder progress in the field. Keywords Adaptation Á Extended evolutionary synthesis Á Neo-Darwinism Á Inclusive fitness I’ve been wondering why so many evolutionary biologists are unimpressed by my idea… and I think the problem goes back to Newton (advocate of the Extended Evolutionary Synthesis) & John J. -
Chapter 1 the Neolithic Revolution and the Birth of Civilization
Chapter 1 The Neolithic Revolution and the Birth of Civilization OUTLINE I. Introduction The history of civilizations comprises only a tiny fraction of the time that the genus Homo has inhabited the earth. Civilized societies, those that relied on sedentary agriculture, developed social stratification and economic specialization, and created population densities sufficient to support urban life, have existed for the last 9,000 years. In order to understand civilizations, it is necessary to look at prehistorical precedents for human development in the Paleolithic and Neolithic ages. The rise of sedentary agricultural communities during the Neolithic is one of the first great transformations of human society. II. Human Life in the Era of Hunters and Gatherers A. Introduction Homo sapiens, one of a number of human-like species, was able to achieve biological dominance over its rivals and to spread over much of the earth by 10,000 B.C.E. The success of Homo sapiens was in part due to the manual dexterity that permitted the production of tools, enhancing the physical capabilities of early humans, and to the intelligence that allowed the development of spoken language, enabling groups of humans to engage in cooperative behavior. B. Paleolithic Culture Oneofthe earliest cultural traditions of Homo sapiens was the use of fire for cooking, for curing animal hides, for making weapons, and as a source of heat and light. By the late Paleolithic age, human groups practiced mixed hunting and gathering. The surviving technology of this period consists of stone tools, the earliest of which date back more than two million years.