Comparison of Dictionary Data Structures
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Skip Lists: a Probabilistic Alternative to Balanced Trees
Skip Lists: A Probabilistic Alternative to Balanced Trees Skip lists are a data structure that can be used in place of balanced trees. Skip lists use probabilistic balancing rather than strictly enforced balancing and as a result the algorithms for insertion and deletion in skip lists are much simpler and significantly faster than equivalent algorithms for balanced trees. William Pugh Binary trees can be used for representing abstract data types Also giving every fourth node a pointer four ahead (Figure such as dictionaries and ordered lists. They work well when 1c) requires that no more than n/4 + 2 nodes be examined. the elements are inserted in a random order. Some sequences If every (2i)th node has a pointer 2i nodes ahead (Figure 1d), of operations, such as inserting the elements in order, produce the number of nodes that must be examined can be reduced to degenerate data structures that give very poor performance. If log2 n while only doubling the number of pointers. This it were possible to randomly permute the list of items to be in- data structure could be used for fast searching, but insertion serted, trees would work well with high probability for any in- and deletion would be impractical. put sequence. In most cases queries must be answered on-line, A node that has k forward pointers is called a level k node. so randomly permuting the input is impractical. Balanced tree If every (2i)th node has a pointer 2i nodes ahead, then levels algorithms re-arrange the tree as operations are performed to of nodes are distributed in a simple pattern: 50% are level 1, maintain certain balance conditions and assure good perfor- 25% are level 2, 12.5% are level 3 and so on. -
Skip B-Trees
Skip B-Trees Ittai Abraham1, James Aspnes2?, and Jian Yuan3 1 The Institute of Computer Science, The Hebrew University of Jerusalem, [email protected] 2 Department of Computer Science, Yale University, [email protected] 3 Google, [email protected] Abstract. We describe a new data structure, the Skip B-Tree that combines the advantages of skip graphs with features of traditional B-trees. A skip B-Tree provides efficient search, insertion and deletion operations. The data structure is highly fault tolerant even to adversarial failures, and allows for particularly simple repair mechanisms. Related resource keys are kept in blocks near each other enabling efficient range queries. Using this data structure, we describe a new distributed peer-to-peer network, the Distributed Skip B-Tree. Given m data items stored in a system with n nodes, the network allows to perform a range search operation for r consecutive keys that costs only O(logb m + r/b) where b = Θ(m/n). In addition, our distributed Skip B-tree search network has provable polylogarithmic costs for all its other basic operations like insert, delete, and node join. To the best of our knowledge, all previous distributed search networks either provide a range search operation whose cost is worse than ours or may require a linear cost for some basic operation like insert, delete, and node join. ? Supported in part by NSF grants CCR-0098078, CNS-0305258, and CNS-0435201. 1 Introduction Peer-to-peer systems provide a decentralized way to share resources among machines. An ideal peer-to-peer network should have such properties as decentralization, scalability, fault-tolerance, self-stabilization, load- balancing, dynamic addition and deletion of nodes, efficient query searching and exploiting spatial as well as temporal locality in searches. -
On the Cost of Persistence and Authentication in Skip Lists*
On the Cost of Persistence and Authentication in Skip Lists⋆ Micheal T. Goodrich1, Charalampos Papamanthou2, and Roberto Tamassia2 1 Department of Computer Science, University of California, Irvine 2 Department of Computer Science, Brown University Abstract. We present an extensive experimental study of authenticated data structures for dictionaries and maps implemented with skip lists. We consider realizations of these data structures that allow us to study the performance overhead of authentication and persistence. We explore various design decisions and analyze the impact of garbage collection and virtual memory paging, as well. Our empirical study confirms the effi- ciency of authenticated skip lists and offers guidelines for incorporating them in various applications. 1 Introduction A proven paradigm from distributed computing is that of using a large collec- tion of widely distributed computers to respond to queries from geographically dispersed users. This approach forms the foundation, for example, of the DNS system. Of course, we can abstract the main query and update tasks of such systems as simple data structures, such as distributed versions of dictionar- ies and maps, and easily characterize their asymptotic performance (with most operations running in logarithmic time). There are a number of interesting im- plementation issues concerning practical systems that use such distributed data structures, however, including the additional features that such structures should provide. For instance, a feature that can be useful in a number of real-world ap- plications is that distributed query responders provide authenticated responses, that is, answers that are provably trustworthy. An authenticated response in- cludes both an answer (for example, a yes/no answer to the query “is item x a member of the set S?”) and a proof of this answer, equivalent to a digital signature from the data source. -
Lecture 26 Fall 2019 Instructors: B&S Administrative Details
CSCI 136 Data Structures & Advanced Programming Lecture 26 Fall 2019 Instructors: B&S Administrative Details • Lab 9: Super Lexicon is online • Partners are permitted this week! • Please fill out the form by tonight at midnight • Lab 6 back 2 2 Today • Lab 9 • Efficient Binary search trees (Ch 14) • AVL Trees • Height is O(log n), so all operations are O(log n) • Red-Black Trees • Different height-balancing idea: height is O(log n) • All operations are O(log n) 3 2 Implementing the Lexicon as a trie There are several different data structures you could use to implement a lexicon— a sorted array, a linked list, a binary search tree, a hashtable, and many others. Each of these offers tradeoffs between the speed of word and prefix lookup, amount of memory required to store the data structure, the ease of writing and debugging the code, performance of add/remove, and so on. The implementation we will use is a special kind of tree called a trie (pronounced "try"), designed for just this purpose. A trie is a letter-tree that efficiently stores strings. A node in a trie represents a letter. A path through the trie traces out a sequence ofLab letters that9 represent : Lexicon a prefix or word in the lexicon. Instead of just two children as in a binary tree, each trie node has potentially 26 child pointers (one for each letter of the alphabet). Whereas searching a binary search tree eliminates half the words with a left or right turn, a search in a trie follows the child pointer for the next letter, which narrows the search• Goal: to just words Build starting a datawith that structure letter. -
Exploring the Duality Between Skip Lists and Binary Search Trees
Exploring the Duality Between Skip Lists and Binary Search Trees Brian C. Dean Zachary H. Jones School of Computing School of Computing Clemson University Clemson University Clemson, SC Clemson, SC [email protected] [email protected] ABSTRACT statically optimal [5] skip lists have already been indepen- Although skip lists were introduced as an alternative to bal- dently derived in the literature). anced binary search trees (BSTs), we show that the skip That the skip list can be interpreted as a type of randomly- list can be interpreted as a type of randomly-balanced BST balanced tree is not particularly surprising, and this has whose simplicity and elegance is arguably on par with that certainly not escaped the attention of other authors [2, 10, of today’s most popular BST balancing mechanisms. In this 9, 8]. However, essentially every tree interpretation of the paper, we provide a clear, concise description and analysis skip list in the literature seems to focus entirely on casting of the “BST” interpretation of the skip list, and compare the skip list as a randomly-balanced multiway branching it to similar randomized BST balancing mechanisms. In tree (e.g., a randomized B-tree [4]). Messeguer [8] calls this addition, we show that any rotation-based BST balancing structure the skip tree. Since there are several well-known mechanism can be implemented in a simple fashion using a ways to represent a multiway branching search tree as a BST skip list. (e.g., replace each multiway branching node with a minia- ture balanced BST, or replace (first child, next sibling) with (left child, right child) pointers), it is clear that the skip 1. -
Search Trees
Lecture III Page 1 “Trees are the earth’s endless effort to speak to the listening heaven.” – Rabindranath Tagore, Fireflies, 1928 Alice was walking beside the White Knight in Looking Glass Land. ”You are sad.” the Knight said in an anxious tone: ”let me sing you a song to comfort you.” ”Is it very long?” Alice asked, for she had heard a good deal of poetry that day. ”It’s long.” said the Knight, ”but it’s very, very beautiful. Everybody that hears me sing it - either it brings tears to their eyes, or else -” ”Or else what?” said Alice, for the Knight had made a sudden pause. ”Or else it doesn’t, you know. The name of the song is called ’Haddocks’ Eyes.’” ”Oh, that’s the name of the song, is it?” Alice said, trying to feel interested. ”No, you don’t understand,” the Knight said, looking a little vexed. ”That’s what the name is called. The name really is ’The Aged, Aged Man.’” ”Then I ought to have said ’That’s what the song is called’?” Alice corrected herself. ”No you oughtn’t: that’s another thing. The song is called ’Ways and Means’ but that’s only what it’s called, you know!” ”Well, what is the song then?” said Alice, who was by this time completely bewildered. ”I was coming to that,” the Knight said. ”The song really is ’A-sitting On a Gate’: and the tune’s my own invention.” So saying, he stopped his horse and let the reins fall on its neck: then slowly beating time with one hand, and with a faint smile lighting up his gentle, foolish face, he began.. -
Investigation of a Dynamic Kd Search Skip List Requiring [Theta](Kn) Space
Hcqulslmns ana nqulstwns et Bibliographie Services services bibliographiques 395 Wellington Street 395, rue Wellington Ottawa ON KIA ON4 Ottawa ON KIA ON4 Canada Canada Your file Votre réference Our file Notre reldrence The author has granted a non- L'auteur a accordé une licence non exclusive licence allowing the exclusive permettant a la National Libraq of Canada to Bibliothèque nationale du Canada de reproduce, loan, distribute or sell reproduire, prêter, distribuer ou copies of this thesis in microforni, vendre des copies de cette thèse sous paper or electronic formats. la forme de microfiche/film, de reproduction sur papier ou sur format électronique. The author retains ownership of the L'auteur conserve la propriété du copyright in this thesis. Neither the droit d'auteur qui protège cette thèse. thesis nor substantial extracts fiom it Ni la thèse ni des extraits substantiels may be printed or othexwise de celle-ci ne doivent être imprimés reproduced without the author's ou autrement reproduits sans son permission. autorisation. A new dynamic k-d data structure (supporting insertion and deletion) labeled the k-d Search Skip List is developed and analyzed. The time for k-d semi-infinite range search on n k-d data points without space restriction is shown to be SZ(k1og n) and O(kn + kt), and there is a space-time trade-off represented as (log T' + log log n) = Sà(n(1og n)"e), where 0 = 1 for k =2, 0 = 2 for k 23, and T' is the scaled query time. The dynamic update tirne for the k-d Search Skip List is O(k1og a). -
An Experimental Study of Dynamic Biased Skip Lists
AN EXPERIMENTAL STUDY OF DYNAMIC BIASED SKIP LISTS by Yiqun Zhao Submitted in partial fulfillment of the requirements for the degree of Master of Computer Science at Dalhousie University Halifax, Nova Scotia August 2017 ⃝c Copyright by Yiqun Zhao, 2017 Table of Contents List of Tables ................................... iv List of Figures .................................. v Abstract ...................................... vii List of Abbreviations and Symbols Used .................. viii Acknowledgements ............................... ix Chapter 1 Introduction .......................... 1 1.1 Dynamic Data Structures . .2 1.1.1 Move-to-front Lists . .3 1.1.2 Red-black Trees . .3 1.1.3 Splay Trees . .3 1.1.4 Skip Lists . .4 1.1.5 Other Biased Data Structures . .7 1.2 Our Work . .8 1.3 Organization of The Thesis . .8 Chapter 2 A Review of Different Search Structures ......... 10 2.1 Move-to-front Lists . 10 2.2 Red-black Trees . 11 2.3 Splay Trees . 14 2.3.1 Original Splay Tree . 14 2.3.2 Randomized Splay Tree . 18 2.3.3 W-splay Tree . 19 2.4 Skip Lists . 20 Chapter 3 Dynamic Biased Skip Lists ................. 24 3.1 Biased Skip List . 24 3.2 Modifications . 29 3.2.1 Improved Construction Scheme . 29 3.2.2 Lazy Update Scheme . 32 ii 3.3 Hybrid Search Algorithm . 34 Chapter 4 Experiments .......................... 36 4.1 Experimental Setup . 38 4.2 Analysis of Different C1 Sizes . 40 4.3 Analysis of Varying Value of t in H-DBSL . 46 4.4 Comparison of Data Structures using Real-World Data . 49 4.5 Comparison with Data Structures using Generated Data . 55 Chapter 5 Conclusions .......................... -
A Set Intersection Algorithm Via X-Fast Trie
Journal of Computers A Set Intersection Algorithm Via x-Fast Trie Bangyu Ye* National Engineering Laboratory for Information Security Technologies, Institute of Information Engineering, Chinese Academy of Sciences, Beijing, 100091, China. * Corresponding author. Tel.:+86-10-82546714; email: [email protected] Manuscript submitted February 9, 2015; accepted May 10, 2015. doi: 10.17706/jcp.11.2.91-98 Abstract: This paper proposes a simple intersection algorithm for two sorted integer sequences . Our algorithm is designed based on x-fast trie since it provides efficient find and successor operators. We present that our algorithm outperforms skip list based algorithm when one of the sets to be intersected is relatively ‘dense’ while the other one is (relatively) ‘sparse’. Finally, we propose some possible approaches which may optimize our algorithm further. Key words: Set intersection, algorithm, x-fast trie. 1. Introduction Fast set intersection is a key operation in the context of several fields when it comes to big data era [1], [2]. For example, modern search engines use the set intersection for inverted posting list which is a standard data structure in information retrieval to return relevant documents. So it has been studied in many domains and fields [3]-[8]. One of the most typical situations is Boolean query which is required to retrieval the documents that contains all the terms in the query. Besides, set intersection is naturally a key component of calculating the Jaccard coefficient of two sets, which is defined by the fraction of size of intersection and union. In this paper, we propose a new algorithm via x-fast trie which is a kind of advanced data structure. -
AVL Tree, Bayer Tree, Heap Summary of the Previous Lecture
DATA STRUCTURES AND ALGORITHMS Hierarchical data structures: AVL tree, Bayer tree, Heap Summary of the previous lecture • TREE is hierarchical (non linear) data structure • Binary trees • Definitions • Full tree, complete tree • Enumeration ( preorder, inorder, postorder ) • Binary search tree (BST) AVL tree The AVL tree (named for its inventors Adelson-Velskii and Landis published in their paper "An algorithm for the organization of information“ in 1962) should be viewed as a BST with the following additional property: - For every node, the heights of its left and right subtrees differ by at most 1. Difference of the subtrees height is named balanced factor. A node with balance factor 1, 0, or -1 is considered balanced. As long as the tree maintains this property, if the tree contains n nodes, then it has a depth of at most log2n. As a result, search for any node will cost log2n, and if the updates can be done in time proportional to the depth of the node inserted or deleted, then updates will also cost log2n, even in the worst case. AVL tree AVL tree Not AVL tree Realization of AVL tree element struct AVLnode { int data; AVLnode* left; AVLnode* right; int factor; // balance factor } Adding a new node Insert operation violates the AVL tree balance property. Prior to the insert operation, all nodes of the tree are balanced (i.e., the depths of the left and right subtrees for every node differ by at most one). After inserting the node with value 5, the nodes with values 7 and 24 are no longer balanced. -
Leftist Heap: Is a Binary Tree with the Normal Heap Ordering Property, but the Tree Is Not Balanced. in Fact It Attempts to Be Very Unbalanced!
Leftist heap: is a binary tree with the normal heap ordering property, but the tree is not balanced. In fact it attempts to be very unbalanced! Definition: the null path length npl(x) of node x is the length of the shortest path from x to a node without two children. The null path lengh of any node is 1 more than the minimum of the null path lengths of its children. (let npl(nil)=-1). Only the tree on the left is leftist. Null path lengths are shown in the nodes. Definition: the leftist heap property is that for every node x in the heap, the null path length of the left child is at least as large as that of the right child. This property biases the tree to get deep towards the left. It may generate very unbalanced trees, which facilitates merging! It also also means that the right path down a leftist heap is as short as any path in the heap. In fact, the right path in a leftist tree of N nodes contains at most lg(N+1) nodes. We perform all the work on this right path, which is guaranteed to be short. Merging on a leftist heap. (Notice that an insert can be considered as a merge of a one-node heap with a larger heap.) 1. (Magically and recursively) merge the heap with the larger root (6) with the right subheap (rooted at 8) of the heap with the smaller root, creating a leftist heap. Make this new heap the right child of the root (3) of h1. -
Chapter 10: Efficient Collections (Skip Lists, Trees)
Chapter 10: Efficient Collections (skip lists, trees) If you performed the analysis exercises in Chapter 9, you discovered that selecting a bag- like container required a detailed understanding of the tasks the container will be expected to perform. Consider the following chart: Dynamic array Linked list Ordered array add O(1)+ O(1) O(n) contains O(n) O(n) O(log n) remove O(n) O(n) O(n) If we are simply considering the cost to insert a new value into the collection, then nothing can beat the constant time performance of a simple dynamic array or linked list. But if searching or removals are common, then the O(log n) cost of searching an ordered list may more than make up for the slower cost to perform an insertion. Imagine, for example, an on-line telephone directory. There might be several million search requests before it becomes necessary to add or remove an entry. The benefit of being able to perform a binary search more than makes up for the cost of a slow insertion or removal. What if all three bag operations are more-or-less equal? Are there techniques that can be used to speed up all three operations? Are arrays and linked lists the only ways of organizing a data for a bag? Indeed, they are not. In this chapter we will examine two very different implementation techniques for the Bag data structure. In the end they both have the same effect, which is providing O(log n) execution time for all three bag operations.