CMSC 420: Lecture 7 Randomized Search Structures: Treaps and Skip Lists
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Skip Lists: a Probabilistic Alternative to Balanced Trees
Skip Lists: A Probabilistic Alternative to Balanced Trees Skip lists are a data structure that can be used in place of balanced trees. Skip lists use probabilistic balancing rather than strictly enforced balancing and as a result the algorithms for insertion and deletion in skip lists are much simpler and significantly faster than equivalent algorithms for balanced trees. William Pugh Binary trees can be used for representing abstract data types Also giving every fourth node a pointer four ahead (Figure such as dictionaries and ordered lists. They work well when 1c) requires that no more than n/4 + 2 nodes be examined. the elements are inserted in a random order. Some sequences If every (2i)th node has a pointer 2i nodes ahead (Figure 1d), of operations, such as inserting the elements in order, produce the number of nodes that must be examined can be reduced to degenerate data structures that give very poor performance. If log2 n while only doubling the number of pointers. This it were possible to randomly permute the list of items to be in- data structure could be used for fast searching, but insertion serted, trees would work well with high probability for any in- and deletion would be impractical. put sequence. In most cases queries must be answered on-line, A node that has k forward pointers is called a level k node. so randomly permuting the input is impractical. Balanced tree If every (2i)th node has a pointer 2i nodes ahead, then levels algorithms re-arrange the tree as operations are performed to of nodes are distributed in a simple pattern: 50% are level 1, maintain certain balance conditions and assure good perfor- 25% are level 2, 12.5% are level 3 and so on. -
Skip B-Trees
Skip B-Trees Ittai Abraham1, James Aspnes2?, and Jian Yuan3 1 The Institute of Computer Science, The Hebrew University of Jerusalem, [email protected] 2 Department of Computer Science, Yale University, [email protected] 3 Google, [email protected] Abstract. We describe a new data structure, the Skip B-Tree that combines the advantages of skip graphs with features of traditional B-trees. A skip B-Tree provides efficient search, insertion and deletion operations. The data structure is highly fault tolerant even to adversarial failures, and allows for particularly simple repair mechanisms. Related resource keys are kept in blocks near each other enabling efficient range queries. Using this data structure, we describe a new distributed peer-to-peer network, the Distributed Skip B-Tree. Given m data items stored in a system with n nodes, the network allows to perform a range search operation for r consecutive keys that costs only O(logb m + r/b) where b = Θ(m/n). In addition, our distributed Skip B-tree search network has provable polylogarithmic costs for all its other basic operations like insert, delete, and node join. To the best of our knowledge, all previous distributed search networks either provide a range search operation whose cost is worse than ours or may require a linear cost for some basic operation like insert, delete, and node join. ? Supported in part by NSF grants CCR-0098078, CNS-0305258, and CNS-0435201. 1 Introduction Peer-to-peer systems provide a decentralized way to share resources among machines. An ideal peer-to-peer network should have such properties as decentralization, scalability, fault-tolerance, self-stabilization, load- balancing, dynamic addition and deletion of nodes, efficient query searching and exploiting spatial as well as temporal locality in searches. -
On the Cost of Persistence and Authentication in Skip Lists*
On the Cost of Persistence and Authentication in Skip Lists⋆ Micheal T. Goodrich1, Charalampos Papamanthou2, and Roberto Tamassia2 1 Department of Computer Science, University of California, Irvine 2 Department of Computer Science, Brown University Abstract. We present an extensive experimental study of authenticated data structures for dictionaries and maps implemented with skip lists. We consider realizations of these data structures that allow us to study the performance overhead of authentication and persistence. We explore various design decisions and analyze the impact of garbage collection and virtual memory paging, as well. Our empirical study confirms the effi- ciency of authenticated skip lists and offers guidelines for incorporating them in various applications. 1 Introduction A proven paradigm from distributed computing is that of using a large collec- tion of widely distributed computers to respond to queries from geographically dispersed users. This approach forms the foundation, for example, of the DNS system. Of course, we can abstract the main query and update tasks of such systems as simple data structures, such as distributed versions of dictionar- ies and maps, and easily characterize their asymptotic performance (with most operations running in logarithmic time). There are a number of interesting im- plementation issues concerning practical systems that use such distributed data structures, however, including the additional features that such structures should provide. For instance, a feature that can be useful in a number of real-world ap- plications is that distributed query responders provide authenticated responses, that is, answers that are provably trustworthy. An authenticated response in- cludes both an answer (for example, a yes/no answer to the query “is item x a member of the set S?”) and a proof of this answer, equivalent to a digital signature from the data source. -
The Randomized Quicksort Algorithm
Outline The Randomized Quicksort Algorithm K. Subramani1 1Lane Department of Computer Science and Electrical Engineering West Virginia University 7 February, 2012 Subramani Sample Analyses Outline Outline 1 The Randomized Quicksort Algorithm Subramani Sample Analyses The Randomized Quicksort Algorithm The Sorting Problem Problem Statement Given an array A of n distinct integers, in the indices A[1] through A[n], Subramani Sample Analyses The Randomized Quicksort Algorithm The Sorting Problem Problem Statement Given an array A of n distinct integers, in the indices A[1] through A[n], permute the elements of A, so that Subramani Sample Analyses The Randomized Quicksort Algorithm The Sorting Problem Problem Statement Given an array A of n distinct integers, in the indices A[1] through A[n], permute the elements of A, so that A[1] < A[2]... A[n]. Subramani Sample Analyses The Randomized Quicksort Algorithm The Sorting Problem Problem Statement Given an array A of n distinct integers, in the indices A[1] through A[n], permute the elements of A, so that A[1] < A[2]... A[n]. Note The assumption of distinctness simplifies the analysis. Subramani Sample Analyses The Randomized Quicksort Algorithm The Sorting Problem Problem Statement Given an array A of n distinct integers, in the indices A[1] through A[n], permute the elements of A, so that A[1] < A[2]... A[n]. Note The assumption of distinctness simplifies the analysis. It has no bearing on the running time. Subramani Sample Analyses The Randomized Quicksort Algorithm The Partition subroutine Function PARTITION(A,p,q) 1: {We partition the sub-array A[p,p + 1,...,q] about A[p].} 2: for (i = (p + 1) to q) do 3: if (A[i] < A[p]) then 4: Insert A[i] into bucket L. -
KP-Trie Algorithm for Update and Search Operations
The International Arab Journal of Information Technology, Vol. 13, No. 6, November 2016 722 KP-Trie Algorithm for Update and Search Operations Feras Hanandeh1, Izzat Alsmadi2, Mohammed Akour3, and Essam Al Daoud4 1Department of Computer Information Systems, Hashemite University, Jordan 2, 3Department of Computer Information Systems, Yarmouk University, Jordan 4Computer Science Department, Zarqa University, Jordan Abstract: Radix-Tree is a space optimized data structure that performs data compression by means of cluster nodes that share the same branch. Each node with only one child is merged with its child and is considered as space optimized. Nevertheless, it can’t be considered as speed optimized because the root is associated with the empty string. Moreover, values are not normally associated with every node; they are associated only with leaves and some inner nodes that correspond to keys of interest. Therefore, it takes time in moving bit by bit to reach the desired word. In this paper we propose the KP-Trie which is consider as speed and space optimized data structure that is resulted from both horizontal and vertical compression. Keywords: Trie, radix tree, data structure, branch factor, indexing, tree structure, information retrieval. Received January 14, 2015; accepted March 23, 2015; Published online December 23, 2015 1. Introduction the exception of leaf nodes, nodes in the trie work merely as pointers to words. Data structures are a specialized format for efficient A trie, also called digital tree, is an ordered multi- organizing, retrieving, saving and storing data. It’s way tree data structure that is useful to store an efficient with large amount of data such as: Large data associative array where the keys are usually strings, bases. -
Balanced Trees Part One
Balanced Trees Part One Balanced Trees ● Balanced search trees are among the most useful and versatile data structures. ● Many programming languages ship with a balanced tree library. ● C++: std::map / std::set ● Java: TreeMap / TreeSet ● Many advanced data structures are layered on top of balanced trees. ● We’ll see several later in the quarter! Where We're Going ● B-Trees (Today) ● A simple type of balanced tree developed for block storage. ● Red/Black Trees (Today/Thursday) ● The canonical balanced binary search tree. ● Augmented Search Trees (Thursday) ● Adding extra information to balanced trees to supercharge the data structure. Outline for Today ● BST Review ● Refresher on basic BST concepts and runtimes. ● Overview of Red/Black Trees ● What we're building toward. ● B-Trees and 2-3-4 Trees ● Simple balanced trees, in depth. ● Intuiting Red/Black Trees ● A much better feel for red/black trees. A Quick BST Review Binary Search Trees ● A binary search tree is a binary tree with 9 the following properties: 5 13 ● Each node in the BST stores a key, and 1 6 10 14 optionally, some auxiliary information. 3 7 11 15 ● The key of every node in a BST is strictly greater than all keys 2 4 8 12 to its left and strictly smaller than all keys to its right. Binary Search Trees ● The height of a binary search tree is the 9 length of the longest path from the root to a 5 13 leaf, measured in the number of edges. 1 6 10 14 ● A tree with one node has height 0. -
Lecture 04 Linear Structures Sort
Algorithmics (6EAP) MTAT.03.238 Linear structures, sorting, searching, etc Jaak Vilo 2018 Fall Jaak Vilo 1 Big-Oh notation classes Class Informal Intuition Analogy f(n) ∈ ο ( g(n) ) f is dominated by g Strictly below < f(n) ∈ O( g(n) ) Bounded from above Upper bound ≤ f(n) ∈ Θ( g(n) ) Bounded from “equal to” = above and below f(n) ∈ Ω( g(n) ) Bounded from below Lower bound ≥ f(n) ∈ ω( g(n) ) f dominates g Strictly above > Conclusions • Algorithm complexity deals with the behavior in the long-term – worst case -- typical – average case -- quite hard – best case -- bogus, cheating • In practice, long-term sometimes not necessary – E.g. for sorting 20 elements, you dont need fancy algorithms… Linear, sequential, ordered, list … Memory, disk, tape etc – is an ordered sequentially addressed media. Physical ordered list ~ array • Memory /address/ – Garbage collection • Files (character/byte list/lines in text file,…) • Disk – Disk fragmentation Linear data structures: Arrays • Array • Hashed array tree • Bidirectional map • Heightmap • Bit array • Lookup table • Bit field • Matrix • Bitboard • Parallel array • Bitmap • Sorted array • Circular buffer • Sparse array • Control table • Sparse matrix • Image • Iliffe vector • Dynamic array • Variable-length array • Gap buffer Linear data structures: Lists • Doubly linked list • Array list • Xor linked list • Linked list • Zipper • Self-organizing list • Doubly connected edge • Skip list list • Unrolled linked list • Difference list • VList Lists: Array 0 1 size MAX_SIZE-1 3 6 7 5 2 L = int[MAX_SIZE] -
Exploring the Duality Between Skip Lists and Binary Search Trees
Exploring the Duality Between Skip Lists and Binary Search Trees Brian C. Dean Zachary H. Jones School of Computing School of Computing Clemson University Clemson University Clemson, SC Clemson, SC [email protected] [email protected] ABSTRACT statically optimal [5] skip lists have already been indepen- Although skip lists were introduced as an alternative to bal- dently derived in the literature). anced binary search trees (BSTs), we show that the skip That the skip list can be interpreted as a type of randomly- list can be interpreted as a type of randomly-balanced BST balanced tree is not particularly surprising, and this has whose simplicity and elegance is arguably on par with that certainly not escaped the attention of other authors [2, 10, of today’s most popular BST balancing mechanisms. In this 9, 8]. However, essentially every tree interpretation of the paper, we provide a clear, concise description and analysis skip list in the literature seems to focus entirely on casting of the “BST” interpretation of the skip list, and compare the skip list as a randomly-balanced multiway branching it to similar randomized BST balancing mechanisms. In tree (e.g., a randomized B-tree [4]). Messeguer [8] calls this addition, we show that any rotation-based BST balancing structure the skip tree. Since there are several well-known mechanism can be implemented in a simple fashion using a ways to represent a multiway branching search tree as a BST skip list. (e.g., replace each multiway branching node with a minia- ture balanced BST, or replace (first child, next sibling) with (left child, right child) pointers), it is clear that the skip 1. -
CSE 326: Data Structures Binary Search Trees
Announcements (1/23/09) CSE 326: Data Structures • HW #2 due now • HW #3 out today, due at beginning of class next Binary Search Trees Friday. • Project 2A due next Wed. night. Steve Seitz Winter 2009 • Read Chapter 4 1 2 ADTs Seen So Far The Dictionary ADT • seitz •Data: Steve • Stack •Priority Queue Seitz –a set of insert(seitz, ….) CSE 592 –Push –Insert (key, value) pairs –Pop – DeleteMin •ericm6 Eric • Operations: McCambridge – Insert (key, value) CSE 218 •Queue find(ericm6) – Find (key) • ericm6 • soyoung – Enqueue Then there is decreaseKey… Eric, McCambridge,… – Remove (key) Soyoung Shin – Dequeue CSE 002 •… The Dictionary ADT is also 3 called the “Map ADT” 4 A Modest Few Uses Implementations insert find delete •Sets • Unsorted Linked-list • Dictionaries • Networks : Router tables • Operating systems : Page tables • Unsorted array • Compilers : Symbol tables • Sorted array Probably the most widely used ADT! 5 6 Binary Trees Binary Tree: Representation • Binary tree is A – a root left right – left subtree (maybe empty) A pointerpointer A – right subtree (maybe empty) B C B C B C • Representation: left right left right pointerpointer pointerpointer D E F D E F Data left right G H D E F pointer pointer left right left right left right pointerpointer pointerpointer pointerpointer I J 7 8 Tree Traversals Inorder Traversal void traverse(BNode t){ A traversal is an order for if (t != NULL) visiting all the nodes of a tree + traverse (t.left); process t.element; Three types: * 5 traverse (t.right); • Pre-order: Root, left subtree, right subtree 2 4 } • In-order: Left subtree, root, right subtree } (an expression tree) • Post-order: Left subtree, right subtree, root 9 10 Binary Tree: Special Cases Binary Tree: Some Numbers… Recall: height of a tree = longest path from root to leaf. -
Randomized Algorithms, Quicksort and Randomized Selection Carola Wenk Slides Courtesy of Charles Leiserson with Additions by Carola Wenk
CMPS 2200 – Fall 2014 Randomized Algorithms, Quicksort and Randomized Selection Carola Wenk Slides courtesy of Charles Leiserson with additions by Carola Wenk CMPS 2200 Intro. to Algorithms 1 Deterministic Algorithms Runtime for deterministic algorithms with input size n: • Best-case runtime Attained by one input of size n • Worst-case runtime Attained by one input of size n • Average runtime Averaged over all possible inputs of size n CMPS 2200 Intro. to Algorithms 2 Deterministic Algorithms: Insertion Sort for j=2 to n { key = A[j] // insert A[j] into sorted sequence A[1..j-1] i=j-1 while(i>0 && A[i]>key){ A[i+1]=A[i] i-- } A[i+1]=key } • Best case runtime? • Worst case runtime? CMPS 2200 Intro. to Algorithms 3 Deterministic Algorithms: Insertion Sort Best-case runtime: O(n), input [1,2,3,…,n] Attained by one input of size n • Worst-case runtime: O(n2), input [n, n-1, …,2,1] Attained by one input of size n • Average runtime : O(n2) Averaged over all possible inputs of size n •What kind of inputs are there? • How many inputs are there? CMPS 2200 Intro. to Algorithms 4 Average Runtime • What kind of inputs are there? • Do [1,2,…,n] and [5,6,…,n+5] cause different behavior of Insertion Sort? • No. Therefore it suffices to only consider all permutations of [1,2,…,n] . • How many inputs are there? • There are n! different permutations of [1,2,…,n] CMPS 2200 Intro. to Algorithms 5 Average Runtime Insertion Sort: n=4 • Inputs: 4!=24 [1,2,3,4]0346 [4,1,2,3] [4,1,3,2] [4,3,2,1] [2,1,3,4]1235 [1,4,2,3] [1,4,3,2] [3,4,2,1] [1,3,2,4]1124 [1,2,4,3] [1,3,4,2] [3,2,4,1] [3,1,2,4]2455 [4,2,1,3] [4,3,1,2] [4,2,3,1] [3,2,1,4]3244 [2,1,4,3] [3,4,1,2] [2,4,3,1] [2,3,1,4]2333 [2,4,1,3] [3,1,4,2] [2,3,4,1] • Runtime is proportional to: 3 + #times in while loop • Best: 3+0, Worst: 3+6=9, Average: 3+72/24 = 6 CMPS 2200 Intro. -
Assignment 3: Kdtree ______Due June 4, 11:59 PM
CS106L Handout #04 Spring 2014 May 15, 2014 Assignment 3: KDTree _________________________________________________________________________________________________________ Due June 4, 11:59 PM Over the past seven weeks, we've explored a wide array of STL container classes. You've seen the linear vector and deque, along with the associative map and set. One property common to all these containers is that they are exact. An element is either in a set or it isn't. A value either ap- pears at a particular position in a vector or it does not. For most applications, this is exactly what we want. However, in some cases we may be interested not in the question “is X in this container,” but rather “what value in the container is X most similar to?” Queries of this sort often arise in data mining, machine learning, and computational geometry. In this assignment, you will implement a special data structure called a kd-tree (short for “k-dimensional tree”) that efficiently supports this operation. At a high level, a kd-tree is a generalization of a binary search tree that stores points in k-dimen- sional space. That is, you could use a kd-tree to store a collection of points in the Cartesian plane, in three-dimensional space, etc. You could also use a kd-tree to store biometric data, for example, by representing the data as an ordered tuple, perhaps (height, weight, blood pressure, cholesterol). However, a kd-tree cannot be used to store collections of other data types, such as strings. Also note that while it's possible to build a kd-tree to hold data of any dimension, all of the data stored in a kd-tree must have the same dimension. -
Binary Search Tree
ADT Binary Search Tree! Ellen Walker! CPSC 201 Data Structures! Hiram College! Binary Search Tree! •" Value-based storage of information! –" Data is stored in order! –" Data can be retrieved by value efficiently! •" Is a binary tree! –" Everything in left subtree is < root! –" Everything in right subtree is >root! –" Both left and right subtrees are also BST#s! Operations on BST! •" Some can be inherited from binary tree! –" Constructor (for empty tree)! –" Inorder, Preorder, and Postorder traversal! •" Some must be defined ! –" Insert item! –" Delete item! –" Retrieve item! The Node<E> Class! •" Just as for a linked list, a node consists of a data part and links to successor nodes! •" The data part is a reference to type E! •" A binary tree node must have links to both its left and right subtrees! The BinaryTree<E> Class! The BinaryTree<E> Class (continued)! Overview of a Binary Search Tree! •" Binary search tree definition! –" A set of nodes T is a binary search tree if either of the following is true! •" T is empty! •" Its root has two subtrees such that each is a binary search tree and the value in the root is greater than all values of the left subtree but less than all values in the right subtree! Overview of a Binary Search Tree (continued)! Searching a Binary Tree! Class TreeSet and Interface Search Tree! BinarySearchTree Class! BST Algorithms! •" Search! •" Insert! •" Delete! •" Print values in order! –" We already know this, it#s inorder traversal! –" That#s why it#s called “in order”! Searching the Binary Tree! •" If the tree is