Victorian Cichlid Society Incorporated
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View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Cork Open Research Archive Title The gut microbiota of marine fish Author(s) Egerton, Sian; Culloty, Sarah; Whooley, Jason; Stanton, Catherine; Ross, R. Paul Original citation Egerton, S., Culloty, S., Whooley, J., Stanton, C. and Ross, R. P. (2018) 'The gut microbiota of marine fish', Frontiers in Microbiology, 9, 873 (17pp). doi: 10.3389/fmicb.2018.00873 Type of publication Article (peer-reviewed) Link to publisher's https://www.frontiersin.org/articles/10.3389/fmicb.2018.00873/full version http://dx.doi.org/10.3389/fmicb.2018.00873 Access to the full text of the published version may require a subscription. Rights © 2018, Egerton, Culloty, Whooley, Stanton and Ross. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. https://creativecommons.org/licenses/by/4.0/ Item downloaded http://hdl.handle.net/10468/6222 from Downloaded on 2019-01-07T05:41:17Z fmicb-09-00873 May 4, 2018 Time: 12:22 # 1 REVIEW published: 04 May 2018 doi: 10.3389/fmicb.2018.00873 The Gut Microbiota of Marine Fish Sian Egerton1,2, Sarah Culloty2,3, Jason Whooley4, Catherine Stanton5,6 and R. Paul Ross1,5,6* 1 School of Microbiology, University College Cork, Cork, Ireland, 2 School of Biological, Earth and Environmental Sciences, University College Cork, Cork, Ireland, 3 Environmental Research Institute, University College Cork, Cork, Ireland, 4 Bio-marine Ingredients Ireland Ltd., Killybegs, Ireland, 5 Teagasc Research Centre, Fermoy, Ireland, 6 APC Microbiome Ireland, Teagasc and University College Cork, Cork, Ireland The body of work relating to the gut microbiota of fish is dwarfed by that on humans and mammals. -
Exchange April 2018 Area of Concern—Lake Tanganyika Do You CARE
The CARES April 2018 Exchange Area of Concern—Lake Tanganyika Do You CARE Crossword Challenge Data Submission Deadline April 30 Welcome to The CARES Exchange. The primary intent of this publication is to make available a listing of CARES fish from the CARES membership to those that may be searching for CARES species. The Cichlid Room Companion is the most It is important to understand that all transac- comprehensive website for reliable cichlid tions are between the buyer and seller and information in the world. For all things cich- CARES in no way moderates any exchanges lid, including information, photos, and videos including shipping problems, refunds, or bad on most CARES Priority List species, visit blood between the two parties. This directo- CRC at www.cichlidae.com. ry merely provides an avenue to which CARES fish may be located. As with all sales, be certain that all the elements of the The CARES Family exchange are worked out before purchasing American Cichlid Association or shipping. Aquarium Club of Lancaster County Brooklyn Aquarium Society No hybrids will knowingly be listed. Capital Cichlid Association Chatham-Kent Aquarium Society There is no cost to place a for sale ad. Your Cichlid Club of York ad may be submitted by contacting the editor, Columbus Area Fish Enthusiasts Greg Steeves, at [email protected]. Danbury Area Aquarium Society Durham Region Aquarium Society If your organization is interested in partici- Federation of Texas Aquarium Societies pating in CARES, review the CARES Startup Grand Valley Aquarium Club tab on the website CARESforfish.org, then Greater Cincinnati Aquarium Society contact Klaus Steinhaus at Greater City Aquarium Society [email protected]. -
Guam Marine Biosecurity Action Plan
GuamMarine Biosecurity Action Plan September 2014 This Marine Biosecurity Action Plan was prepared by the University of Guam Center for Island Sustainability under award NA11NOS4820007 National Oceanic and Atmospheric Administration Coral Reef Conservation Program, as administered by the Office of Ocean and Coastal Resource Management and the Bureau of Statistics and Plans, Guam Coastal Management Program. The statements, findings, conclusions, and recommendations are those of the author(s) and do not necessarily reflect the views of the National Oceanic and Atmospheric Administration. Guam Marine Biosecurity Action Plan Author: Roxanna Miller First Released in Fall 2014 About this Document The Guam Marine Biosecurity Plan was created by the University of Guam’s Center for Island Sustainability under award NA11NOS4820007 National Oceanic and Atmospheric Administration Coral Reef Conservation Program, as administered by the Office of Ocean and Coastal Resource Management and the Bureau of Statistics and Plans, Guam Coastal Management Program. Information and recommendations within this document came through the collaboration of a variety of both local and federal agencies, including the National Oceanic and Atmospheric Administration (NOAA) National Marine Fisheries Service (NMFS), the NOAA Coral Reef Conservation Program (CRCP), the University of Guam (UOG), the Guam Department of Agriculture’s Division of Aquatic and Wildlife Resources (DAWR), the United States Coast Guard (USCG), the Port Authority of Guam, the National Park Service -
Testing Conjectures About Morphological Diversity in Cichlids of Lakes Malawi and Tanganyika
Copeia, 2005(2), pp. 359±373 Testing Conjectures about Morphological Diversity in Cichlids of Lakes Malawi and Tanganyika PROSANTA CHAKRABARTY The morphological diversity of Malawi and Tanganyika cichlids has often been qualitatively described, but rarely have hypotheses based on these descriptions been tested empirically. Using landmark based geometric morphometrics, shapes are an- alyzed independent of other aspects of the body form (e.g., size). The estimation of shape disparity, the quantitative measure of the variance of these raw shapes, can then be applied in order to objectively test hypotheses about morphological diver- sity. The shape disparity within and between different groups is explored as well as how it is partitioned within the cichlid body. Tanganyika cichlids are found to have signi®cantly greater shape disparity than Malawi cichlids. Ectodini is found to have signi®cantly greater shape disparity than other Great Lake tribes. Piscivorous cich- lids are signi®cantly more disparate in shape than cichlids with other diets, and the shape disparity of the cranial region was signi®cantly greater than that of the post- cranial region. ``We begin by describing the shape of an object in Lake cichlids have been described (Bouton et the simple words of common speech: we end by al., 2002a; Wautier et al., 2002; Kassam et al., de®ning it in the precise language of mathemat- 2003a) including evidence of convergence of ics; and the one method tends to follow the other these elements between lakes (RuÈber and Ad- in strict scienti®c order and historical continui- ams, 2001; Kassam et al., 2003b); however, those ty.''±D'Arcy Thompson, 1917 (On Growth studies dealt only with patterns of morphologi- and Form) cal diversity rather than with its magnitude. -
Gene Sequencing and Phylogenetic Analysis: Powerful Tools for an Improved Diagnosis of Fish Mycobacteriosis Caused by Mycobacterium Fortuitum Group Members
microorganisms Article Gene Sequencing and Phylogenetic Analysis: Powerful Tools for an Improved Diagnosis of Fish Mycobacteriosis Caused by Mycobacterium fortuitum Group Members Davide Mugetti 1,* , Mattia Tomasoni 1, Paolo Pastorino 1 , Giuseppe Esposito 2, Vasco Menconi 1 , Alessandro Dondo 1 and Marino Prearo 1 1 Istituto Zooprofilattico Sperimentale del Piemonte, Liguria e Valle d’Aosta, Via Bologna 148, 10154 Torino, Italy; [email protected] (M.T.); [email protected] (P.P.); [email protected] (V.M.); [email protected] (A.D.); [email protected] (M.P.) 2 Dipartimento di Medicina Veterinaria, Università degli Studi di Sassari, Via Vienna 2, 07100 Sassari, Italy; [email protected] * Correspondence: [email protected]; Tel.: +39-01-1268-6251 Abstract: The Mycobacterium fortuitum group (MFG) consists of about 15 species of fast-growing nontuberculous mycobacteria (NTM). These globally distributed microorganisms can cause diseases in humans and animals, especially fish. The increase in the number of species belonging to MFG and the diagnostic techniques panel do not allow to clarify their real clinical significance. In this study, biomolecular techniques were adopted for species determination of 130 isolates derived from fish Citation: Mugetti, D.; Tomasoni, M.; initially identified through biochemical tests as NTM belonging to MFG. Specifically, gene sequencing Pastorino, P.; Esposito, G.; Menconi, and phylogenetic analysis were used based on a fragment of the gene encoding the 65 KDa heat V.; Dondo, A.; Prearo, M. Gene shock protein (hsp65). The analyzes made it possible to confirm that all the isolates belong to MFG, Sequencing and Phylogenetic allowing to identify the strains at species level. -
Cichlids Correct Feeding for a Good Husbandry
Cichlids correct feeding for a good husbandry www.JBL.de Dear Cichlid-friend, We have produced this brochure in order to make easier for you to give your cichlids the right food and care for this species. With about 2.000 varieties of cichlid, all types of eating habits are represented here: from plant-eaters to omnivorous species to pure predators. Giving the right food makes sense, as the wrong food will be excreted by the fish un- digested (or partially digested). Incorrect feeding is proven to lead to increased water pollution. Clean (unpolluted) water free of ammonium/ ammonia and nitrite is a basic requirement of successful aquarium- keeping – special water qualities are often only essential for breeding. Wishing you continued pleasure from this fascinating group of fish! Your JBL Research Team Contents Feeding in a community aquarium ......................................... 3 Water values .......................................................................... 3 Central and South America Small predators ..................................................................... 4 Medium-sized predators ........................................................ 5 Large predators ..................................................................... 6 Africa West and Central Africa ......................................................... 7 East Africa Lake Tanganyika Predators .......................................................................8-9 Grazing cichlids ..........................................................10-11 Lake -
Perciformes, Cichlidae) of East Africa, Based on Scale and Squamation Characters
Journal of Fish Biology (1993) 42, 903-946 A phyletic study on lacustrine haplochromine fishes (Perciformes, Cichlidae) of East Africa, based on scale and squamation characters E. L i p p i t s c h Steingrabenweg 26, A-8044 Graz, Austria (.Received 10 August 1992, Accepted 13 October 1992) Phyletic relations within the haplochromine cichlids of East Africa were investigated vising scale and squamation characters. Within the L. Victoria-Edward-Kivu species flock most of the genera proposed in Greenwood’s revision could be confirmed by this approach. In addition the genera could be interrelated phylogenetically. They form two distinct superlineages comprising several genera each. The genus Axtatoiilapia as conceived by Greenwood is diphyletic. The fluviatile members of the genus form the sister taxon of the L. Victoria-Edward-Kivu flock, while the rest are a subgroup of that flock. The flock seems to be of monophyletic origin. Key words: scale morphology; squamation; phylogenetic relationships; haplochromine fishes; Cichlidae. I. INTRODUCTION When in his classic paper of 1920 C. T. Regan expressed his opinion on Haplochromis, being the ‘ largest African genus ’ (Regan, 1920), he determined the direction for the next 60 years of systematics in East African cichlids. That genus, introduced by Hilgendorf (1888) as a subgenus of Chromis to accommodate a Lake Victoria species with peculiar dentition, became a dumping ground for over 300 species from all over the continent. Regan’s authority prevented any large-scale revision of the complex until 1979. This is the more astonishing as no formal diagnosis for the genus was available, and the only apomorph character uniting the whole assembly (the structure of the pharyngeal apophysis) is found in a number of other genera as well. -
De Vertebrados De Moçambique Checklist of Vertebrates of Mozambique
‘Checklist’ de Vertebrados de Moçambique Checklist of Vertebrates of Mozambique Michael F. Schneider*, Victorino A. Buramuge, Luís Aliasse & Filipa Serfontein * autor para a correspondência – author for correspondence [email protected] Universidade Eduardo Mondlane Faculdade de Agronomia e Engenharia Florestal Departamento de Engenharia Florestal Maputo, Moçambique Abril de 2005 financiado por – funded by IUCN Mozambique Fundo Para a Gestão dos Recursos Naturais e Ambiente (FGRNA) Projecto No 17/2004/FGRNA/PES/C2CICLO2 Índice – Table of Contents Abreviaturas – Abbreviations..............................................................................2 Nomes vernáculos – vernacular names: .............................................................3 Referências bibliográficas – Bibliographic References ......................................4 Checklist de Mamíferos- Checklist of Mammals ................................................5 Checklist de Aves- Checklist of Birds ..............................................................38 Checklist de Répteis- Checklist of Reptiles ....................................................102 Checklist de Anfíbios- Checklist of Amphibians............................................124 Checklist de Peixes- Checklist of Fish............................................................130 1 Abreviaturas - Abbreviations * espécie introduzida – introduced species ? ocorrência duvidosa – occurrence uncertain end. espécie endémica (só avaliada para mamíferos, aves e répteis) – endemic species (only -
Unrestricted Species
UNRESTRICTED SPECIES Actinopterygii (Ray-finned Fishes) Atheriniformes (Silversides) Scientific Name Common Name Bedotia geayi Madagascar Rainbowfish Melanotaenia boesemani Boeseman's Rainbowfish Melanotaenia maylandi Maryland's Rainbowfish Melanotaenia splendida Eastern Rainbow Fish Beloniformes (Needlefishes) Scientific Name Common Name Dermogenys pusilla Wrestling Halfbeak Characiformes (Piranhas, Leporins, Piranhas) Scientific Name Common Name Abramites hypselonotus Highbacked Headstander Acestrorhynchus falcatus Red Tail Freshwater Barracuda Acestrorhynchus falcirostris Yellow Tail Freshwater Barracuda Anostomus anostomus Striped Headstander Anostomus spiloclistron False Three Spotted Anostomus Anostomus ternetzi Ternetz's Anostomus Anostomus varius Checkerboard Anostomus Astyanax mexicanus Blind Cave Tetra Boulengerella maculata Spotted Pike Characin Carnegiella strigata Marbled Hatchetfish Chalceus macrolepidotus Pink-Tailed Chalceus Charax condei Small-scaled Glass Tetra Charax gibbosus Glass Headstander Chilodus punctatus Spotted Headstander Distichodus notospilus Red-finned Distichodus Distichodus sexfasciatus Six-banded Distichodus Exodon paradoxus Bucktoothed Tetra Gasteropelecus sternicla Common Hatchetfish Gymnocorymbus ternetzi Black Skirt Tetra Hasemania nana Silver-tipped Tetra Hemigrammus erythrozonus Glowlight Tetra Hemigrammus ocellifer Head and Tail Light Tetra Hemigrammus pulcher Pretty Tetra Hemigrammus rhodostomus Rummy Nose Tetra *Except if listed on: IUCN Red List (Endangered, Critically Endangered, or Extinct -
Bayesian Node Dating Based on Probabilities of Fossil Sampling Supports Trans-Atlantic Dispersal of Cichlid Fishes
Supporting Information Bayesian Node Dating based on Probabilities of Fossil Sampling Supports Trans-Atlantic Dispersal of Cichlid Fishes Michael Matschiner,1,2y Zuzana Musilov´a,2,3 Julia M. I. Barth,1 Zuzana Starostov´a,3 Walter Salzburger,1,2 Mike Steel,4 and Remco Bouckaert5,6y Addresses: 1Centre for Ecological and Evolutionary Synthesis (CEES), Department of Biosciences, University of Oslo, Oslo, Norway 2Zoological Institute, University of Basel, Basel, Switzerland 3Department of Zoology, Faculty of Science, Charles University in Prague, Prague, Czech Republic 4Department of Mathematics and Statistics, University of Canterbury, Christchurch, New Zealand 5Department of Computer Science, University of Auckland, Auckland, New Zealand 6Computational Evolution Group, University of Auckland, Auckland, New Zealand yCorresponding author: E-mail: [email protected], [email protected] 1 Supplementary Text 1 1 Supplementary Text Supplementary Text S1: Sequencing protocols. Mitochondrial genomes of 26 cichlid species were amplified by long-range PCR followed by the 454 pyrosequencing on a GS Roche Junior platform. The primers for long-range PCR were designed specifically in the mitogenomic regions with low interspecific variability. The whole mitogenome of most species was amplified as three fragments using the following primer sets: for the region between position 2 500 bp and 7 300 bp (of mitogenome starting with tRNA-Phe), we used forward primers ZM2500F (5'-ACG ACC TCG ATG TTG GAT CAG GAC ATC C-3'), L2508KAW (Kawaguchi et al. 2001) or S-LA-16SF (Miya & Nishida 2000) and reverse primer ZM7350R (5'-TTA AGG CGT GGT CGT GGA AGT GAA GAA G-3'). The region between 7 300 bp and 12 300 bp was amplified using primers ZM7300F (5'-GCA CAT CCC TCC CAA CTA GGW TTT CAA GAT GC-3') and ZM12300R (5'-TTG CAC CAA GAG TTT TTG GTT CCT AAG ACC-3'). -
CARES Exchange March 2017
The CARES Exchange Volume I Number I CARES Area of Concern: Lake Victoria March 2017 The Directory of Available CARES Species New CARES Website Launch Meet Your CARES Team Calendar of Aquatic Events 2 Welcome to the charter issue of The CARES Ex- If your organization is interested in participating in change. The primary intent of this publication is to CARES, review the ‘CARES Startup’ tab on the web- make available a listing of CARES fish from the CA- site CARESforfish.org, then contact Klaus Steinhaus RES membership to those that may be searching for at CARES species. [email protected]. ___________________________________________ It is important to understand that all transactions are Species maintenance is serious business. When deal- between the buyer and seller and CARES in no way ing with CARES Priority Listed species, you are liter- moderates any exchanges including shipping prob- ally the guardian of that animal. Yes it is a collective lems, refunds, or bad blood between the two parties. effort but one not to be taken lightly. When contact- This directory merely provides an avenue to which ing a CARES availability list participant to obtain a CARES fish may be located. As with all sales, be cer- fish, please ensure you have done ample research to tain that all the elements of the exchange are worked ensure you can provide a suitable environment for its out before purchasing or shipping. long-term care. Many questions can be answered on the CARES Facebook group at https:// No hybrids will knowingly be listed. www.facebook.com/groups/153148624721520/. -
Relationship Between Local and Scientific Names of Fishes in Lake Malawi / Nyasa
22-3/2 03.4.8 4:25 PM ページ123 African Study Monographs, 22(3): 123-154, September 2001 123 RELATIONSHIP BETWEEN LOCAL AND SCIENTIFIC NAMES OF FISHES IN LAKE MALAWI / NYASA Aggrey AMBALI1, Harvey KABWAZI1, Lawrence MALEKANO2, George MWALE1, Davie CHIMWAZA1, John INGAINGA1, Naoki MAKIMOTO1, Setsuko NAKAYAMA3, Masahide YUMA4, Yukiko KADA5 1Biology Department, Chancellor College, University of Malawi 2History Department, Chancellor College, University of Malawi 3Graduate School of Asian and African Area Studies, Kyoto University 4Center for Ecological Research, Kyoto University 5Lake Biwa Museum ABSTRACT An interview survey was carried out in 20 Malawian lakeside villages from 1999 to 2000 to clarify the relationship between local and scientific names of the fishes in Lake Malawi/Nyasa. Fishermen in various localities responded with 536 local fish names for photographs shown of 106 fish species and color morphs. Similarity analysis of local name usage produced three groups of localities corresponding with the Tonga, Tumbuka, and Nyanja/Yao languages. A single scientific fish species had 10.2 local fish names, while one local fish name covered 2.0 scientific fish species, and 64.3% of local fish names were used only for one scientific species. A few local fish names were used widely irrespective of lan- guage, although 69.5% of local fish names were collected only from one locality. These facts suggest that lakeside residents identify fish at the biological taxonomy level, although the naming was specific to a particular locality. Most fishes with a high variety of local names were shallow-water dwelling species with low local market values, whereas fishes with fewer local names were mainly offshore species of high commercial value.