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Venter Institute
Genomics:GTL Program Projects J. Craig Venter Institute 42 Estimation of the Minimal Mycoplasma Gene Set Using Global Transposon Mutagenesis and Comparative Genomics John I. Glass* ([email protected]), Nina Alperovich, Nacyra Assad-Garcia, Shibu Yooseph, Mahir Maruf, Carole Lartigue, Cynthia Pfannkoch, Clyde A. Hutchison III, Hamilton O. Smith, and J. Craig Venter J. Craig Venter Institute, Rockville, MD The Venter Institute aspires to make bacteria with specific metabolic capabilities encoded by artificial genomes. To achieve this we must develop technologies and strategies for creating bacterial cells from constituent parts of either biological or synthetic origin. Determining the minimal gene set needed for a functioning bacterial genome in a defined laboratory environment is a necessary step towards our goal. For our initial rationally designed cell we plan to synthesize a genome based on a mycoplasma blueprint (mycoplasma being the common name for the class Mollicutes). We chose this bacterial taxon because its members already have small, near minimal genomes that encode limited metabolic capacity and complexity. We took two approaches to determine what genes would need to be included in a truly minimal synthetic chromosome of a planned Mycoplasma laboratorium: determination of all the non-essential genes through random transposon mutagenesis of model mycoplasma species, Mycoplasma genitalium, and comparative genomics of a set of 15 mycoplasma genomes in order to identify genes common to all members of the taxon. Global transposon mutagenesis has been used to predict the essential gene set for a number of bac- teria. In Bacillus subtilis all but 271 of bacterium’s ~4100 genes could be knocked out. -
Microbial Identification Framework for Risk Assessment
Microbial Identification Framework for Risk Assessment May 2017 Cat. No.: En14-317/2018E-PDF ISBN 978-0-660-24940-7 Information contained in this publication or product may be reproduced, in part or in whole, and by any means, for personal or public non-commercial purposes, without charge or further permission, unless otherwise specified. You are asked to: • Exercise due diligence in ensuring the accuracy of the materials reproduced; • Indicate both the complete title of the materials reproduced, as well as the author organization; and • Indicate that the reproduction is a copy of an official work that is published by the Government of Canada and that the reproduction has not been produced in affiliation with or with the endorsement of the Government of Canada. Commercial reproduction and distribution is prohibited except with written permission from the author. For more information, please contact Environment and Climate Change Canada’s Inquiry Centre at 1-800-668-6767 (in Canada only) or 819-997-2800 or email to [email protected]. © Her Majesty the Queen in Right of Canada, represented by the Minister of the Environment and Climate Change, 2016. Aussi disponible en français Microbial Identification Framework for Risk Assessment Page 2 of 98 Summary The New Substances Notification Regulations (Organisms) (the regulations) of the Canadian Environmental Protection Act, 1999 (CEPA) are organized according to organism type (micro- organisms and organisms other than micro-organisms) and by activity. The Microbial Identification Framework for Risk Assessment (MIFRA) provides guidance on the required information for identifying micro-organisms. This document is intended for those who deal with the technical aspects of information elements or information requirements of the regulations that pertain to identification of a notified micro-organism. -
TRANSCRIPT Applications
Presidential Commission for the Study of Bioethical Issues TRANSCRIPT Applications J. Craig Venter, Ph.D. Founder and President, J. Craig Venter Institute George Church, Ph.D. Professor of Genetics, Harvard Medical School Kristala L. J. Prather, Ph.D. Assistant Professor, Dept. of Chemical Engineering, Massachu- setts Institute of Technology Meeting 1, Session 2 July 8, 2010 Washington, D.C. Jim Wagner: Could we have our speakers come to the table. And if others could take their chairs, we’ll get under way. Thank you. Commission members, we need you as well, actually. I see them filter- ing up. I saw Nita out there. And there’s Bonnie in the back of the room. So that there is ample time for our speakers to present and for us to ask questions, let’s do get under way. Really, again, appreciate this morning’s conversation and the presenta- tions, helping us to — wow. Helping us to define what is and is not synthetic biology and to understand a little bit more about some of the science involved. This particular session, we are going to focus and we have asked our experts to focus more on applications. We’ll try to use a similar format. Have our speakers present for a brief period. You have the timer in front of you. Make sure after all of you have pre- sented the commission has time to ask questions. And then we’ll try to throw it open — not try to – we will, certainly, throw it open to the public for other questions they may have. -
Driving Diffusion of Scientific Innovation
Driving Diffusion of Scientific Innovation - The Role of Institutional Entrepreneurship and Open Science in Synthetic Biology Vom Promotionsausschuss der Technischen Universit¨at Hamburg-Harburg zur Erlangung des akademischen Grades Doktor der Wirtschafts- und Sozialwissenschaften (Dr. rer. pol.) genehmigte Dissertation von Giulio Barth aus M¨unster 2018 Advisors: Prof. Dr. C. Ihl, Prof. Dr. M. G. M¨ohrle Institute of Entrepreneurship, TUHH i Gutachter: Prof. Dr. C. Ihl Prof. Dr. M. G. Mohrle¨ Vorsitz: Prof. Dr. C. Luthje¨ Tag der mundlichen¨ Prufung:¨ 14. September 2018 ”Our victory: inevitable; our timing: uncertain.” (Drew Endy, Assistant Professor Stanford University) i Abstract Scientific innovations need to widely diffuse to fully exploit their potential. Prior research investigated levers on the diffusion of scientific innovation with particular interest on institutions, e.g., settings of property rights. As institutional theory lacks in explaining emergence and shaping of institu- tions, the institutional entrepreneur approach faces these limitations. Key actors combine logics from multiple fields and convince their social context of their ideas to legitimate the creation of new institutions and shape an emerging field. This thesis validates theories on institutional entrepreneurs and investigates the end-to process from diffusing a logic to the impact of an established insti- tution on scientific innovations in context of the emerging synthetic biology. The field is expected to introduce the 5th revolution and characterized by the central logic of making biology an engineering discipline. In chapter 4 theories on institutional entrepreneurs driving diffusion of in- stitutional logics to shape an emerging field are validated. To measure the social influence mechanisms, the heterogeneous diffusion model is adapted to the institutional logic. -
WIKINOMICS How Mass Collaboration Changes Everything
WIKINOMICS How Mass Collaboration Changes Everything EXPANDED EDITION Don Tapscott and Anthony D. Williams Portfolio Praise for Wikinomics “Wikinomics illuminates the truth we are seeing in markets around the globe: the more you share, the more you win. Wikinomics sheds light on the many faces of business collaboration and presents a powerful new strategy for business leaders in a world where customers, employees, and low-cost producers are seizing control.” —Brian Fetherstonhaugh, chairman and CEO, OgilvyOne Worldwide “A MapQuest–like guide to the emerging business-to-consumer relation- ship. This book should be invaluable to any manager—helping us chart our way in an increasingly digital world.” —Tony Scott, senior vice president and chief information officer, The Walt Disney Company “Knowledge creation happens in social networks where people learn and teach each other. Wikinomics shows where this phenomenon is headed when turbocharged to engage the ideas and energy of customers, suppli- ers, and producers in mass collaboration. It’s a must-read for those who want a map of where the world is headed.” —Noel Tichy, professor, University of Michigan and author of Cycle of Leadership “A deeply profound and hopeful book. Wikinomics provides compelling evidence that the emerging ‘creative commons’ can be a boon, not a threat to business. Every CEO should read this book and heed its wise counsel if they want to succeed in the emerging global economy.” —Klaus Schwab, founder and executive chairman, World Economic Forum “Business executives who want to be able to stay competitive in the future should read this compelling and excellently written book.” —Tiffany Olson, president and CEO, Roche Diagnostics Corporation, North America “One of the most profound shifts transforming business and society in the early twenty-first century is the rapid emergence of open, collaborative innovation models. -
Southwest Retort
SOUTHWEST RETORT SIXTY-NINTH YEAR OCTOBER 2016 Published for the advancement of Chemists, Chemical Engineers and Chemistry in this area published by The Dallas-Fort Worth Section, with the cooperation of five other local sections of the American Chemical Society in the Southwest Region. Vol. 69(2) OCTOBER 2016 Editorial and Business Offices: Contact the Editor for subscription and advertisement information. Editor: Connie Hendrickson: [email protected] Copy Editor: Mike Vance, [email protected] Business Manager: Danny Dunn: [email protected] The Southwest Retort is published monthly, September through May, by the Dallas-Ft. Worth Section of the American Chemical Society, Inc., for the ACS Sections of the Southwest Region. October 2016 Southwest RETORT 1 TABLE OF CONTENTS Employment Clearing House………….......3 Fifty Years Ago……………………….….....6 ARTICLES and COLUMNS Schulz Award Winner Gale Hunt………….7 And Another Thing……………………….11 Around the Area………………………….14 Letter from the Editor….…..……….........17 SPECIAL EVENTS National Chemistry Week…………………9 NEWS SHORTS Former pesticide ingredient found in dolphins, birds and fish……………………8 Coffee-infused foam removes lead from contaminated water………………………10 Snake venom composition could be related to hormones and diet……………………..13 Detecting blood alcohol content with an electronic skin patch………………...……16 INDEX OF ADVERTISERS Huffman Laboratories……………....……..4 Contact the DFW Section Vance Editing…..…………….…….……….4 General: [email protected] UT Arlington………………………………..4 Education: [email protected] ANA-LAB……………………...….…...……5 Elections: [email protected] Facebook: DFWACS Twitter: acsdfw October 2016 Southwest RETORT 2 EMPLOYMENT CLEARING HOUSE Job applicants should send name, email, and phone, along with type of position and geographical area desired; employers may contact job applicants directly. -
CBD/DSI/AHTEG/2018/1/3 12 January 2018
CBD Distr. GENERAL CBD/SBSTTA/22/INF/3 CBD/DSI/AHTEG/2018/1/3 12 January 2018 ENGLISH ONLY AD HOC TECHNICAL EXPERT GROUP ON SUBSIDIARY BODY ON SCIENTIFIC, DIGITAL SEQUENCE INFORMATION ON TECHNICAL AND TECHNOLOGICAL GENETIC RESOURCES ADVICE Montreal, Canada, 13-16 February 2018 Twenty-second meeting Item 3 of the provisional agenda** Montreal, Canada, 2-7 July 2018 Item 3 of the provisional agenda*** FACT-FINDING AND SCOPING STUDY ON DIGITAL SEQUENCE INFORMATION ON GENETIC RESOURCES IN THE CONTEXT OF THE CONVENTION ON BIOLOGICAL DIVERSITY AND THE NAGOYA PROTOCOL Note by the Executive Secretary 1. In decision XIII/16, paragraph 3(b), the Executive Secretary was requested to commission a fact-finding and scoping study, subject to the availability of funds, to clarify terminology and concepts and to assess the extent and the terms and conditions of the use of digital sequence information on genetic resources in the context of the Convention and the Nagoya Protocol. 2. Accordingly, the Executive Secretary commissioned a research team led by Ms. Sarah Laird of People and Plants International and Ms. Rachel Wynberg of the University of Cape Town, to carry out this study. The study was undertaken with the generous financial support of Canada, the European Union and Switzerland. 3. A draft of the study was made available online for peer review from 8 November to 1 December 2017. 1 The comments received in response have been made available online.2 The research team revised the study in the light of the comments received and the final version is presented below in the form and language in which it was received by the Secretariat of the Convention on Biological Diversity. -
The Grand Challenges in the Chemical Sciences
The Israel Academy of Sciences and Humanities Celebrating the 70 th birthday of the State of Israel conference on THE GRAND CHALLENGES IN THE CHEMICAL SCIENCES Jerusalem, June 3-7 2018 Biographies and Abstracts The Israel Academy of Sciences and Humanities Celebrating the 70 th birthday of the State of Israel conference on THE GRAND CHALLENGES IN THE CHEMICAL SCIENCES Participants: Jacob Klein Dan Shechtman Dorit Aharonov Roger Kornberg Yaron Silberberg Takuzo Aida Ferenc Krausz Gabor A. Somorjai Yitzhak Apeloig Leeor Kronik Amiel Sternberg Frances Arnold Richard A. Lerner Sir Fraser Stoddart Ruth Arnon Raphael D. Levine Albert Stolow Avinoam Ben-Shaul Rudolph A. Marcus Zehev Tadmor Paul Brumer Todd Martínez Reshef Tenne Wah Chiu Raphael Mechoulam Mark H. Thiemens Nili Cohen David Milstein Naftali Tishby Nir Davidson Shaul Mukamel Knut Wolf Urban Ronnie Ellenblum Edvardas Narevicius Arieh Warshel Greg Engel Nathan Nelson Ira A. Weinstock Makoto Fujita Hagai Netzer Paul Weiss Oleg Gang Abraham Nitzan Shimon Weiss Leticia González Geraldine L. Richmond George M. Whitesides Hardy Gross William Schopf Itamar Willner David Harel Helmut Schwarz Xiaoliang Sunney Xie Jim Heath Mordechai (Moti) Segev Omar M. Yaghi Joshua Jortner Michael Sela Ada Yonath Biographies and Abstracts (Arranged in alphabetic order) The Grand Challenges in the Chemical Sciences Dorit Aharonov The Hebrew University of Jerusalem Quantum Physics through the Computational Lens While the jury is still out as to when and where the impressive experimental progress on quantum gates and qubits will indeed lead one day to a full scale quantum computing machine, a new and not-less exciting development had been taking place over the past decade. -
Role of Protein Phosphorylation in Mycoplasma Pneumoniae
Pathogenicity of a minimal organism: Role of protein phosphorylation in Mycoplasma pneumoniae Dissertation zur Erlangung des mathematisch-naturwissenschaftlichen Doktorgrades „Doctor rerum naturalium“ der Georg-August-Universität Göttingen vorgelegt von Sebastian Schmidl aus Bad Hersfeld Göttingen 2010 Mitglieder des Betreuungsausschusses: Referent: Prof. Dr. Jörg Stülke Koreferent: PD Dr. Michael Hoppert Tag der mündlichen Prüfung: 02.11.2010 “Everything should be made as simple as possible, but not simpler.” (Albert Einstein) Danksagung Zunächst möchte ich mich bei Prof. Dr. Jörg Stülke für die Ermöglichung dieser Doktorarbeit bedanken. Nicht zuletzt durch seine freundliche und engagierte Betreuung hat mir die Zeit viel Freude bereitet. Des Weiteren hat er mir alle Freiheiten zur Verwirklichung meiner eigenen Ideen gelassen, was ich sehr zu schätzen weiß. Für die Übernahme des Korreferates danke ich PD Dr. Michael Hoppert sowie Prof. Dr. Heinz Neumann, PD Dr. Boris Görke, PD Dr. Rolf Daniel und Prof. Dr. Botho Bowien für das Mitwirken im Thesis-Komitee. Der Studienstiftung des deutschen Volkes gilt ein besonderer Dank für die finanzielle Unterstützung dieser Arbeit, durch die es mir unter anderem auch möglich war, an Tagungen in fernen Ländern teilzunehmen. Prof. Dr. Michael Hecker und der Gruppe von Dr. Dörte Becher (Universität Greifswald) danke ich für die freundliche Zusammenarbeit bei der Durchführung von zahlreichen Proteomics-Experimenten. Ein ganz besonderer Dank geht dabei an Katrin Gronau, die mich in die Feinheiten der 2D-Gelelektrophorese eingeführt hat. Außerdem möchte ich mich bei Andreas Otto für die zahlreichen Proteinidentifikationen in den letzten Monaten bedanken. Nicht zu vergessen ist auch meine zweite Außenstelle an der Universität in Barcelona. Dr. Maria Lluch-Senar und Dr. -
Creative Commons Licence: an Alternative Solution to Copyright in the New Media Arena
CORE Metadata, citation and similar papers at core.ac.uk Provided by Sydney eScholarship CHAPTER FOURTEEN CREATIVE COMMONS LICENCE: AN ALTERNATIVE SOLUTION TO COPYRIGHT IN THE NEW MEDIA ARENA Chunyan Wang• AN INTRODUCTION TO CREATIVE COMMONS Creative Commons (CC) is a global non-profit organisation that provides free tools, including Creative Commons licenses and software, to enable authors, researchers, artists and educators to easily mark their creative works with the specific intellectual property rights they wish their creative works to carry. The mission of CC is to build a system of balanced intellectual property rights by advocating a ‘some rights reserved’ alternative to the traditional ‘all rights reserved’ system.1 CC is dedicated to building a flexible copyright regime in the face of increasingly restrictive copyright rules. It encourages legal sharing, remixing, and reuse of creative work, and provides a legal platform to spread and build digitally enabled creative culture. Incorporating distributive and legal mechanisms at the same time, CC serves to remedy excessively restrictive intellectual property protection. By promoting a fair and user-friendly structure of intellectual property rights, CC is helping to realise open access to knowledge. • Many thanks to Professor Brian Fitzgerald of Queensland University of Technology and Professor Gao Fuping of East China University of Political Science and Law for inviting me to write this article. Thanks also to Dr Stewart Cheifet of Internet Archive and Professor Jing Wang of MIT for their comments and assistance in writing this article. Additional thanks to Mr Yi Zheng and Mr Fei Yang for their help. 1 Creative Commons <http://creativecommons.org>. -
Opening a New Chapter in the Martian Chronicles
California Institute of Technology Volume 2., No.• ~emlMr1"2 B•• ed on d.t. from the 1975 Viking ml ••lon , the Explore". Guide to MoIr • .... pon Arden Albee'. w a ll will be In for . ome updating once Ma ,. Ob.erve r be g in. It ••urv e v of the planet late ne xt vear. Albee ke ep. a replica of the .pacecraft In Caltech'. Office of Graduate Studle., w" .. e In addition to hi. role a. Ob.e rver project .clentl.t, he'. been dean . lnce1984. Opening a new chapter in the Martian Chronicles BV Heidi Aapaturlan Speaking this past August at a many Mars aficionados ever since the working in concert like an interplan "It's not cleat what sort of geologic NASA press conference called to herald Viking Lander's soil experimencs came etary one-man band, will monitor and dynamics might have produced this che upcoming launch of Mars Observer, up empty in 1975: has life ever map Mars with a sweep and precision dichotomy," says Albee, alchough he Cal tech Professor of Geology Arden evolved on Mars? Did the planet once that is expected to yield more informa suspects that the answer may start to Albee sounded ar rimes like a man who harbor a bacterial Atlantis that van tion abour the planer's composition, emerge once ic's determined whether had jusc been commissioned to write ished, along with its water, aeons ago? climate, geology, and evolutionary Mars, like Earth, has a magnetic field. the lyrics for the Marcian version of Although no one expects the Mars history than all previous miss ions co Currenc theory holds that a planet'S "America che Beauciful." "We know Observer, launched September 25 from Mars put together. -
United States Securities and Exchange Commission Washington, D.C. 20549 Form N-Px Annual Report of Proxy Voting Record of Registered Management Investment Companies
UNITED STATES SECURITIES AND EXCHANGE COMMISSION WASHINGTON, D.C. 20549 FORM N-PX ANNUAL REPORT OF PROXY VOTING RECORD OF REGISTERED MANAGEMENT INVESTMENT COMPANIES INVESTMENT COMPANY ACT FILE NUMBER: 811-07175 NAME OF REGISTRANT: VANGUARD TAX-MANAGED FUNDS ADDRESS OF REGISTRANT: PO BOX 2600, VALLEY FORGE, PA 19482 NAME AND ADDRESS OF AGENT FOR SERVICE: ANNE E. ROBINSON PO BOX 876 VALLEY FORGE, PA 19482 REGISTRANT'S TELEPHONE NUMBER, INCLUDING AREA CODE: (610) 669-1000 DATE OF FISCAL YEAR END: DECEMBER 31 DATE OF REPORTING PERIOD: JULY 1, 2018 - JUNE 30, 2019 FUND: VANGUARD TAX-MANAGED CAPITAL APPRECIATION FUND --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ISSUER: 2U, Inc. TICKER: TWOU CUSIP: 90214J101 MEETING DATE: 6/26/2019 FOR/AGAINST PROPOSAL: PROPOSED BY VOTED? VOTE CAST MGMT PROPOSAL #1.1: ELECT DIRECTOR TIMOTHY M. HALEY ISSUER YES WITHHOLD AGAINST PROPOSAL #1.2: ELECT DIRECTOR VALERIE B. JARETT ISSUER YES WITHHOLD AGAINST PROPOSAL #1.3: ELECT DIRECTOR EARL LEWIS ISSUER YES FOR FOR PROPOSAL #1.4: ELECT DIRECTOR CORETHA M. RUSHING ISSUER YES FOR FOR PROPOSAL #2: RATIFY KPMG LLP AS AUDITORS ISSUER YES FOR FOR PROPOSAL #3: ADVISORY VOTE TO RATIFY NAMED EXECUTIVE ISSUER YES AGAINST AGAINST OFFICERS' COMPENSATION --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ISSUER: 3M Company TICKER: MMM CUSIP: 88579Y101 MEETING DATE: 5/14/2019 FOR/AGAINST PROPOSAL: PROPOSED BY VOTED? VOTE CAST MGMT PROPOSAL #1a: ELECT DIRECTOR THOMAS "TONY" K. BROWN ISSUER YES FOR FOR PROPOSAL #1b: ELECT DIRECTOR PAMELA J. CRAIG ISSUER YES FOR FOR PROPOSAL #1c: ELECT DIRECTOR DAVID B. DILLON ISSUER YES FOR FOR PROPOSAL #1d: ELECT DIRECTOR MICHAEL L. ESKEW ISSUER YES FOR FOR PROPOSAL #1e: ELECT DIRECTOR HERBERT L.