Structure and Spectral Sensitivity of Photoreceptors of Two Anchovy Species: Engraulis Japonicus and Engraulis Encrasicolus ⇑ Sergei L
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ABSTRACT Anchoviella Vaillanti
Volume 45(esp.):33‑40, 2014 REDESCRIPTION OF THE FRESHWATER ANCHOVY ANCHOVIELLA VAILLANTI (STEINDACHNER, 1908) (CLUPEIFORMES: ENGRAULIDAE) WITH NOTES ON THE DISTRIBUTION OF ESTUARINE CONGENERS IN THE RIO SÃO FRANCISCO BASIN, BRAZIL 1,2 MARINA VIANNA LOEB 1,3 JOSÉ LIMA DE FIGUEIREDO ABSTRACT Anchoviella vaillanti (Steindachner, 1908) was described based on few specimens from the middle Rio São Francisco; however, several specimens of the species have been collected in recent decades. The range of morphological variation of A. vaillanti could thus be reassessed based on a larger number of specimens currently available in fish collections, and the species redescribed. Anchoviella vaillanti can be recognized among freshwater congeners by the relative position of the pelvic, dorsal and anal fins. Records of the species in ichthyological collections are restricted to the upper and middle portions of the Rio São Francisco basin, but the species might also occur in the lower Rio São Francisco. Comments on the distribution of the marine species of Anchoviella from the lower Rio São Francisco basin and an identification key including those species and A. vaillanti are provided. Key-Words: Ichthyology; Taxonomy; Neotropical; Rio São Francisco basin; Anchovy. INTRODUCTION coast and can extend distances up the lower portions of rivers. In a recent study of the Brazilian freshwater Anchoviella is one of the most species-rich gen- species of Anchoviella, Loeb (2009) recognized seven era of the Engraulidae, with about 17 valid marine, different Amazonian species (two of them still unde- estuarine and freshwater species distributed in South scribed) and one single species from the Rio São Fran- American rivers and along the Atlantic and Pacific cisco basin, Anchoviella vaillanti (Steindachner, 1908). -
Taxonomic Status of Engraulis Nattereri Steindachner, 1880 (Osteichthyes: Clupeiformes: Engraulidae)
Zootaxa 3941 (2): 299–300 ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ Correspondence ZOOTAXA Copyright © 2015 Magnolia Press ISSN 1175-5334 (online edition) http://dx.doi.org/10.11646/zootaxa.3941.2.11 http://zoobank.org/urn:lsid:zoobank.org:pub:C678D597-6515-41F2-8771-ED72618D67D4 Taxonomic status of Engraulis nattereri Steindachner, 1880 (Osteichthyes: Clupeiformes: Engraulidae) MARINA VIANNA LOEB & NAÉRCIO AQUINO MENEZES Museu de Zoologia da Universidade de São Paulo. Caixa Postal 42494, 04218-970. São Paulo, SP, Brazil. E-mail: [email protected] Engraulis nattereri Steindachner, 1880 was described on the basis of five specimens collected in Pará during the Nathaniel Thayer Expedition. Later on, the species was assigned to Anchoviella by Fowler (1941). Including Anchoviella nattereri (Steindachner, 1880), Anchoviella comprises 17 small to medium-sized valid species (20–160 mm standard length), nine of them distributed in freshwaters of the Amazon, Essequibo, Corantijn and Orinoco river basins, and other eight brackish and marine species distributed along the Atlantic and Pacific coasts of North, Central and South America (Loeb & Figueiredo, 2014). Although the generic-level classification of E. nattereri within Anchoviella does not show any controversy, the characteristics provided by Steindachner (1880) in the original description of Engraulis nattereri do not allow its proper synonymization with any valid species of the Engraulidae. Thus, herein we discuss the taxonomic status of Engraulis nattereri, poiting out the reasons -
Freshwater Fish and Aquatic Habitat Survey of Cape York Peninsula
CAPE YORK PENINSULA NATURAL RESOURCES ANALYSIS PROGRAM (NRAP) FRESHWATER FISH AND AQUATIC HABITAT SURVEY OF CAPE YORK PENINSULA B. W. Herbert, J.A. Peeters, P.A. Graham and A.E. Hogan Freshwater Fisheries and Aquaculture Centre Queensland Department of Primary Industries 1995 CYPLUS is a joint initiative of the Queensland and Commonwealth Governments CAPE YORK PENINSULA LAND USE STRATEGY (CYPLUS) Natural Resources Analysis Program FRESHWATER FISH AND AQUATIC HABITAT SURVEY OF CAPE YORK PENINSULA B. W. Herbert, J. A. Peeters, P.A. Graham and A.E. Hogan Freshwater Fisheries and Aquaculture Centre Queensland Department of Primary Industries 1995 CYPLUS is a joint initiative of the Queensland and Commonwealth Governments Final report on project: NRlO - FISH FAUNA SURVEY Recommended citation: Herbert, B.W., Peeters, J.A., Graham, P.A. and Hogan, A.E. (1995). 'Freshwater Fish and Aquatic Habitat Survey of Cape York Peninsula'. (Cape York Peninsula Land Use Strategy, Office of the Co-ordinator General of Queensland, Brisbane, Department of the Environment, Sport and Territories, Canberra, Queensland Department of Primary Industries, Brisbane.) Note: Due to the timing of publication, reports on other CYPLUS projects may not be fully cited in the REFERENCES section. However, they should be able to be located by author, agency or subject. ISBN 0 7242 6204 0 The State of Queensland and Commonwealth of Australia 1995. Copyright protects this publication. Except for purposes permitted by the Copyright Act 1968, no part may be reproduced by any means without the prior written permission of the Office of the Co-ordinator General of Queensland and the Australian Government Publishing Service. -
The Molecular Evolution of Rhodopsin in Marine-Derived
THE MOLECULAR EVOLUTION OF RHODOPSIN IN MARINE-DERIVED AND OTHER FRESHWATER FISHES by Alexander Van Nynatten A thesis submitted in conformity with the requirements for the degree of Doctor of Philosophy Department of Cell and Systems Biology University of Toronto © Copyright by Alexander Van Nynatten (2019) THE MOLECULAR EVOLUTION OF RHODOPSIN IN MARINE-DERIVED AND OTHER FRESHWATER FISHES A thesis submitted in conformity with the requirements for the degree of Doctor of Philosophy Department of Cell and Systems Biology University of Toronto © Copyright by Alexander Van Nynatten (2019) ABSTRACT Visual system evolution can be influenced by the spectral properties of light available in the environment. Variation in the dim-light specialized visual pigment rhodopsin is thought to result in functional shifts that optimize its sensitivity in relation to ambient spectral environments. Marine and freshwater environments have been shown to be characterized by different spectral properties and might be expected to place the spectral sensitivity of rhodopsin under different selection pressures. In Chapter two, I show that the rate ratio of non- synonymous to synonymous substitutions is significantly elevated in the rhodopsin gene of a South American clade of freshwater anchovies with marine ancestry. This signature of positive selection is not observed in the rhodopsin gene of the marine sister clade or in non-visual genes. ii In Chapter three I functionally characterize the effects of positively selected substitutions occurring on another independent invasion of freshwater made by ancestrally marine croakers. In vitro spectroscopic assays on ancestrally resurrected rhodopsin pigments reveal a red-shift in peak spectral sensitivity along the transitional branch, consistent with the wavelengths of light illuminating freshwater environments. -
Role of Body Size and Temporal Hydrology in The
Hydrobiologia (2013) 703:247–256 DOI 10.1007/s10750-012-1370-z PRIMARY RESEARCH PAPER Role of body size and temporal hydrology in the dietary shifts of shortjaw tapertail anchovy Coilia brachygnathus (Actinopterygii, Engraulidae) in a large floodplain lake Huan Zhang • Gongguo Wu • Huan Zhang • Ping Xie • Jun Xu • Qiong Zhou Received: 9 September 2011 / Revised: 11 October 2012 / Accepted: 22 October 2012 / Published online: 7 November 2012 Ó Springer Science+Business Media Dordrecht 2012 Abstract Seasonal water-level changes in floodplain d13C values were observed among larger anchovies lakes can induce variations in primary and secondary between seasons, indicating a temporal dietary shift. production, thus affecting trophic interactions. In this Anchovies fed primarily on shrimp and fish during the study, we tested the latter by studying size- and temporal low-water season despite the predominance of zoo- hydrology-related shifts in the diet of shortjaw tapertail plankton during the two seasons studied, which indi- anchovy Coilia brachygnathus (Actinopterygii, Engra- cated increased piscivorous reliance. C. brachygnathus ulidae) from Lake Poyang. During the wet season, d13C exhibited higher d15N values during the wet season values ranged from -28.2% for small anchovies to because the food items were 15N-enriched. Human -24.6% for larger individuals, but d15N ranged from waste brought by floods could be another possible 18.9% for smaller fish to 12.4% for larger fish. interpretation. Considering C. brachygnathus is an Significant 13C-enrichment and 15N-depletion occurred important link between plankton production and higher with increasing size, revealing that different carbon piscivorous trophic levels, changes in the species are sources were used as the fish grew. -
On the Origins of Marine‐Derived Freshwater Fishes in South America
Journal of Biogeography (J. Biogeogr.) (2017) 44, 1927–1938 ORIGINAL On the origins of marine-derived ARTICLE freshwater fishes in South America Devin D. Bloom1,2* and Nathan R. Lovejoy3 1Department of Biological Sciences, Western ABSTRACT Michigan University, Kalamazoo, MI, USA, Aim The South American fish fauna is renowned for its extraordinary diver- 2Institute of the Environment and sity. The majority of this diversity is restricted to few major clades that have Sustainability, Western Michigan University, Kalamazoo, MI, USA, 3Department of ancient associations to freshwater habitats. However, at a higher taxonomic Biological Sciences, University of Toronto level, the South American ichthyofauna is enriched by an extraordinary num- – Scarborough, Toronto, ON, Canada ber of marine derived lineages lineages that are endemic to freshwaters, but derived from marine ancestors. Here, we test palaeogeographical hypotheses that attempt to explain the origins and exceptional diversity of marine derived fishes in rivers of South America. Location South America. Methods We analysed time-calibrated molecular phylogenies, ancestral recon- structions and biogeographical patterns for multiple independent marine- derived lineages. Results Five of the ten marine-derived lineages in our analysis have biogeo- graphical patterns and stem ages consistent with invasion from the Atlantic Ocean during the Oligocene or Eocene. Drums and pufferfishes reveal patterns and ages that were consistent with the Miocene marine incursion hypothesis. The Amazonian halfbeak is the only lineage younger than the Miocene and invaded Amazonian freshwaters less than a million years ago. Main Conclusion Our results suggest Miocene marine incursions and the Pebas Mega-Wetland may not explain the high diversity of marine derived lin- eages in South America. -
A Survey of the Fish Fauna of the Roper River Near Jude's Crossing in The
A survey of the fish fauna of the Roper River near Jude’s Photograph: P. Cowan Crossing in the late dry season 2013 Report number 02/2014D www.nt.gov.au/lrm This report can be cited as: Dostine, P.L. (2014). A survey of the fish fauna of the Roper River near Jude’s Crossing in the late dry season 2013. Department of Land Resource Management. Report number 02/2014D. Palmerston, Northern Territory. © Northern Territory of Australia, 2014 ISBN 978-1-74350-053-8 Freshwater fish fauna of the Roper River ii Executive summary Ground and surface water extraction during the dry season will reduce dry season flows in the Roper River and may impact ecological processes within the river. This report describes preliminary studies of the fish fauna of the Roper River, along a reach of the Roper River near Jude’s Crossing (14° 49’ S 134° 02’ E) on Flying Fox Station. The site is located in the middle reaches of the Roper River downstream of potential ground and surface water extractions for irrigation and mining use. The objective of the study was to assess appropriate sampling methods for quantitative description of fish communities within different stream habitats. Trials were conducted of the efficacy of bankside observation, gill-netting, and baited underwater video stations. The work is a precursor to the establishment of an environmental monitoring program linked to potential reductions in dry season flow. The fish fauna of the middle reaches of the Roper River includes at least 35 species from 21 families. The families Ariidae (fork-tailed catfishes), Plotosidae (eel-tail catfishes) and Terapontidae (grunters) are each represented by at least 4 species. -
Standard Symbolic Codes for Institutional Resource Collections in Herpetology and Ichthyology Version 6.5 Compiled by Mark Henry Sabaj, 16 August 2016
Standard Symbolic Codes for Institutional Resource Collections in Herpetology and Ichthyology Version 6.5 Compiled by Mark Henry Sabaj, 16 August 2016 Citation: Sabaj M.H. 2016. Standard symbolic codes for institutional resource collections in herpetology and ichthyology: an Online Reference. Version 6.5 (16 August 2016). Electronically accessible at http://www.asih.org/, American Society of Ichthyologists and Herpetologists, Washington, DC. Primary sources (all cross-checked): Leviton et al. 1985, Leviton & Gibbs 1988, http://www.asih.org/codons.pdf (originating with John Bruner), Poss & Collette 1995 and Fricke & Eschmeyer 2010 (on-line v. 15 Jan) Additional on-line resources for Biological Collections (cross-check: token) ZEFOD: information system to botanical and zoological http://zefod.genres.de/ research collections in Germany http://www.fishwise.co.za/ Fishwise: Universal Fish Catalog http://species.wikimedia.org/wiki/Holotype Wikispecies, Holotype, directory List of natural history museums, From Wikipedia, the http://en.wikipedia.org/wiki/List_of_natural_history_museums free encyclopedia http://www.ncbi.nlm.nih.gov/IEB/ToolBox/C_DOC/lxr/source/data/institution_codes.txt National Center for Biotechnology Information List of museum abbreviations compiled by Darrel R. http://research.amnh.org/vz/herpetology/amphibia/?action=page&page=museum_abbreviations Frost. 2010. Amphibian Species of the World: an Online Reference. BCI: Biological Collections Index (to be key component http://www.biodiversitycollectionsindex.org/static/index.html -
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Clupeiformes: Engraulidae), Uma Espécie De Manjuba Pouco Conhecida Do Atlântico Ocidental
Universidade Federal do Rio de Janeiro Campus UFRJ-Macaé Professor Aloísio Teixeira Programa de Pós-Graduação em Ciências Ambientais e Conservação Revisão taxonômica de Anchoviella cayennensis (Puyo, 1945) (Clupeiformes: Engraulidae), uma espécie de manjuba pouco conhecida do Atlântico ocidental Lorena Soares Agostinho 2019 2 Universidade Federal do Rio de Janeiro Campus UFRJ-Macaé Professor Aloísio Teixeira Programa de Pós-Graduação em Ciências Ambientais e Conservação Revisão taxonômica de Anchoviella cayennensis (Puyo, 1945) (Clupeiformes: Engraulidae), uma espécie de manjuba pouco conhecida do Atlântico ocidental Lorena Soares Agostinho Dissertação de Mestrado apresentada ao Programa de Pós-Graduação em Ciências Ambientais e Conservação, Campus UFRJ-Macaé, Professor Aloísio Teixeira, da Universidade Federal do Rio de Janeiro, como parte dos requisitos necessários à obtenção do título de Mestre em Ciências Ambientais e Conservação. Orientador: Dr. Fabio Di Dario Coorientadora: Dra. Marina Vianna Loeb Macaé Julho, 2019 3 Revisão taxonômica de Anchoviella cayennensis (Puyo, 1945) (Clupeiformes: Engraulidae), uma espécie de manjuba pouco conhecida do Atlântico ocidental Lorena Soares Agostinho Orientador: Dr. Fabio Di Dario Coorientadora: Dra. Marina Vianna Loeb Dissertação de Mestrado submetida ao Programa de Pós-Graduação em Ciências Ambientais e Conservação, Campus UFRJ-Macaé Professor Aloísio Teixeira, da Universidade Federal do Rio de Janeiro, como parte dos requisitos necessários à obtenção do título de Mestre em Ciências Ambientais e Conservação. Aprovado por: Profa. Dra. Veronica de Barros Slobodian Motta Prof. Dr. Michael Maia Mincarone Presidente, Prof. Dr. Fabio Di Dario Macaé Julho, 2019 4 Macaé – RJ 2019 FICHA CATALOGRÁFICA Agostinho, Lorena Soares Revisão taxonômica de Anchoviella cayennensis (Puyo, 1945) (Clupeiformes: Engraulidae), uma espécie de manjuba pouco conhecida do Atlântico ocidental/Lorena Soares Agostinho. -
The Freshwater Biodiversity of New Guinea
Australia New Guinea Fishes Association Queensland Inc. Freshwater Biodiversity of New Guinea Special Publication: June. 2007 These discoveries were made under Conservation International Rapid Assessment Program (RAP) which deploys expert scientists to poorly understood regions in order to quickly assess the biological diversity of an area. The conservation organization makes RAP results immediately available to local and international decision makers to help support conservation action and biodiversity protection. New Guinea's forests are some of the most biodiverse in the world, but they are increasingly under threat from commercial logging. However, the Foja Mountains of western New Guinea are so isolated – in the furthest reaches of the Indonesian province of West Papua - they remain relatively untouched. In other parts of West Papua poaching is taking a heavy toll on wildlife populations. Whatever your subject of interest, you'll find the biodiversity of New Guinea extremely fascinating. The Freshwater Biodiversity of New Guinea island contains very high levels of biodiversity and species endemism, boasting as many bird and plant : Compiled by Adrian R. Tappin species as nearby Australia in one tenth the land surface. Home to a unique array of plant and animal species hile Planet Earth is becoming an including the fabled birds of paradise, birdwing increasingly smaller and more familiar butterflies, tree-kangaroos, and more species of orchid W world as every corner is explored and than anywhere else on Earth, New Guinea ranks among colonised, there still remains many freshwater species the top biologically important regions of our planet. Its undiscovered and undocumented. A number of significant ethnic diversity is no less remarkable: almost one fifth of species have been discovered in recent times, revealing a the world’s human languages are spoken here by huge gap in the knowledge of the world around us. -
Conservation Status of Australian Fishes - 1999
Conservation Status of Australian Fishes - 1999 Australian Society for Fish Biology and IUCN in parentheses. IUCN categories: (CD) Critically Endangered; (E) Endangered; (V) vulnerable; (LR-N) Lower Risk (Near Threatened); (LR-L) Lower Risk (Least Concern); (DD) Data Deficient; (NE) Not Evaluated * Denotes taxa where formal taxonomic description has not been published but where listing is essential because of concern over their conservation status. Early formal publication will be encouraged to resolve their taxonomic status. CATEGORY SCIENTIFIC NAME COMMON NAME EXTINCT No species ENDANGERED Brachionichthys hirsutus spotted handfish (CD) Chlamydogobius micropterus Elizabeth Springs goby (CD) Galaxias fontanus Swan galaxias (CD) Galaxias fuscus barred galaxias (CD) Galaxias johnstoni Clarence galaxias (CD) Galaxias pedderensis Pedder galaxias (CD) Maccullochella macquariensis trout cod (E) Maccullochella ikei eastern cod (E) Maccullochella peelii mariensis Mary River cod (CD) Melanotaenia eachamensis Lake Eacham rainbowfish (V) Nannoperca oxleyana Oxleyan pigmy perch (E) Scaturiginichthys vermeilipinnis redfinned blue-eye (CD) Conservation Status of Australian Fishes | 1999 | Page 1 VULNERABLE Carcharias taurus grey nurse shark (V) Chlamydogobius squamigenus Edgbaston goby (CD) Galaxias tanycephalus saddled galaxias (V) Macquaria australasica Macquarie perch (E) * Mogurnda n.sp. Flinders Ranges gudgeon (V) Nannoperca variegata variegated pigmy perch (V) Nannatherina balstoni Balston’s pygmy perch (DD) Pseudomugil mellis honey blue-eye (E) * Sympterichthys n.sp. Ziebell's handfish (V) * Sympterichthys n.sp. Waterfall Bay handfish (V) POTENTIALLY THREATENED Bidyanus bidyanus silver perch (V) Craterocephalus dalhousiensis Dalhousie hardyhead (V) Craterocephalus fluviatilis Murray hardyhead (E) Craterocephalus gloveri Glover's hardyhead (V) Epinephelus daemelii black cod (DD) Galaxias parvus swamp galaxias (DD) Galaxiella pusilla dwarf galaxias (V) Mordacia praecox non-parasitic lamprey (V) Neosilurus gloveri.