Genome DNA Barcodes for Bio -surveillance: Regulated and Economically Important Arthropod Plant Pests Journal: Genome Manuscript ID gen-2016-0024.R2 Manuscript Type: Review Date Submitted by the Author: 16-Jul-2016 Complete List of Authors: Ashfaq, Muhammad; University of Guelph Biodiversity Institute of Ontario Hebert, Paul; Biodiversity Institute of Ontario, species identification,Draft cryptic taxa, invasive species, quarantine, pest Keyword: management https://mc06.manuscriptcentral.com/genome-pubs Page 1 of 73 Genome DNA Barcodes for Bio-surveillance: Regulated and Economically Important Arthropod Plant Pests Muhammad Ashfaq* and Paul D.N. Hebert Centre for Biodiversity Genomics, Biodiversity Institute of Ontario, University of Guelph, Guelph, ON, Canada * Corresponding author: Draft Muhammad Ashfaq Centre for Biodiversity Genomics, Biodiversity Institute of Ontario, University of Guelph, Guelph, ON N1G 2W1, Canada Email:
[email protected] Phone: (519) 824-4120 Ext. 56393 1 https://mc06.manuscriptcentral.com/genome-pubs Genome Page 2 of 73 Abstract Many of the arthropod species that are important pests of agriculture and forestry are impossible to discriminate morphologically throughout all of their life stages. Some cannot be differentiated at any life stage. Over the past decade, DNA barcoding has gained increasing adoption as a tool to both identify known species and to reveal cryptic taxa. Although there has not been a focused effort to develop a barcode library for them, reference sequences are now available for 77% of the 409 species of arthropods documented on major pest databases. Aside from developing the reference library needed to guide specimen identifications, past barcode studies have revealed that a significant fraction of arthropod pests are a complex of allied taxa.