Innate Immune Responses to Cryptococcus
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Idiopathic CD4 Lymphocytopenia: Spectrum of Opportunistic Infections, Malignancies, and Autoimmune Diseases
Published online: 2021-08-09 REVIEW ARTICLE Idiopathic CD4 Lymphocytopenia: Spectrum of opportunistic infections, malignancies, and autoimmune diseases Dina S. Ahmad, Mohammad Esmadi, William C. Steinmann Department of Internal Medicine, University of Missouri School of Medicine, Columbia, MO, USA Access this article online ABSTRACT Website: www.avicennajmed.com DOI: 10.4103/2231-0770.114121 Idiopathic CD4 lymphocytopenia (ICL) was first defined in 1992 by the US Centers for Disease Quick Response Code: Control and Prevention (CDC) as the repeated presence of a CD4+ T lymphocyte count of fewer than 300 cells per cubic millimeter or of less than 20% of total T cells with no evidence of human immunodeficiency virus (HIV) infection and no condition that might cause depressed CD4 counts. Most of our knowledge about ICL comes from scattered case reports. The aim of this study was to collect comprehensive data from the previously published cases to understand the characteristics of this rare condition. We searched the PubMed database and Science Direct for case reports since 1989 for Idiopathic CD4 lymphocytopenia cases. We found 258 cases diagnosed with ICL in 143 published papers. We collected data about age, sex, pathogens, site of infections, CD4 count, CD8 count, CD4:CD8 ratio, presence of HIV risk factors, malignancies, autoimmune diseases and whether the patients survived or died. The mean age at diagnosis of first opportunistic infection (or ICL if no opportunistic infection reported) was 40.7 ± 19.2 years (standard deviation), with a range of 1 to 85. One-sixty (62%) patients were males, 91 (35.2%) were females, and 7 (2.7%) patients were not identified whether males or females. -
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Copyright Ó 2010 by the Genetics Society of America DOI: 10.1534/genetics.109.113027 A Tetrad Analysis of the Basidiomycete Fungus Cryptococcus neoformans Alexander Idnurm Division of Cell Biology and Biophysics, School of Biological Sciences, University of Missouri-Kansas City, Kansas City, Missouri 64110 Manuscript received December 10, 2009 Accepted for publication February 9, 2010 ABSTRACT Cryptococcus neoformans is a basidiomycete fungus that is found worldwide and causes disease in humans and animal species. The fungus grows asexually as a budding yeast. Under laboratory conditions it is capable of sexual reproduction between two mating types. After cell fusion a dikaryotic filament develops, at the tip of which a basidium gives rise to four chains of basidiospores. Because the chains each comprise 10–30 spores, rather than single spores, the analysis of individual meiotic events has not been attempted in C. neoformans in the style of tetrad analyses performed in other fungal species. Here, the basidiospores from .100 basidia were micromanipulated and the resultant .2500 progeny analyzed for three genetic markers to understand the sexual process in this fungus, leading to four observations: (i) Marker seg- regation provides genetic evidence for a single meiotic event within the basidium followed by multiple rounds of mitosis. (ii) Using each basidium as an unordered tetrad, the ADE2 and URA5 genes are linked to their centromeres, consistent with adjacent genomic regions rich in repetitive elements predicted to comprise Cryptococcus centromeres. (iii) Lack of germination of basidiospores is attributed to aneuploidy, rather than dormancy. (iv) Analysis of basidiospores derived from single chains demonstrates that each chain can contain different genotypes. -
Product Sheet Info
Product Information Sheet for NR-50430 Cryptococcus gattii, Strain C10 Propagation: 1. Keep vial frozen until ready for use; thaw rapidly. Catalog No. NR-50430 2. Inoculate an agar plate with approximately 50 µL of thawed culture and/or transfer the entire thawed aliquot into a single tube of broth For research use only. Not for human use. 3. Incubate the plate and/or tube at 25°C for 2 to 4 days. Contributor: Citation: Brian Wong, M.D., Professor, and Igor Bruzual, Ph.D., Acknowledgment for publications should read “The following Infectious Disease Division, Department of Medicine, Oregon reagent was obtained through BEI Resources, NIAID, NIH: Health and Science University, Portland, Oregon, USA Cryptococcus gattii, Strain C10, NR-50430.” Manufacturer: Biosafety Level: 2 BEI Resources Appropriate safety procedures should always be used with this material. Laboratory safety is discussed in the following Product Description: publication: U.S. Department of Health and Human Services, Classification: Tremellaceae, Cryptococcus Public Health Service, Centers for Disease Control and Species: Cryptococcus gattii Prevention, and National Institutes of Health. Biosafety in Strain: C10 Microbiological and Biomedical Laboratories. 5th ed. Original Source: Cryptococcus gattii (C. gattii), strain C10 Washington, DC: U.S. Government Printing Office, 2009; see was isolated from an unknown human source in the Pacific www.cdc.gov/biosafety/publications/bmbl5/index.htm. Northwest region of North America.1 Comments: C. gattii, strain C10 was deposited as lineage Disclaimers: VGIIa and resistant to azoles.1 You are authorized to use this product for research use only. The Cryptococcus species complex is comprised of four It is not intended for human use. -
Signal Integration of Syk-Coupled C-Type Lectin Receptors
Contact, Collaboration, and Conflict: Signal Integration of Syk-Coupled C-Type Lectin Receptors This information is current as Jenny Ostrop and Roland Lang of September 27, 2021. J Immunol 2017; 198:1403-1414; ; doi: 10.4049/jimmunol.1601665 http://www.jimmunol.org/content/198/4/1403 Downloaded from References This article cites 202 articles, 75 of which you can access for free at: http://www.jimmunol.org/content/198/4/1403.full#ref-list-1 Why The JI? Submit online. http://www.jimmunol.org/ • Rapid Reviews! 30 days* from submission to initial decision • No Triage! Every submission reviewed by practicing scientists • Fast Publication! 4 weeks from acceptance to publication *average by guest on September 27, 2021 Subscription Information about subscribing to The Journal of Immunology is online at: http://jimmunol.org/subscription Permissions Submit copyright permission requests at: http://www.aai.org/About/Publications/JI/copyright.html Email Alerts Receive free email-alerts when new articles cite this article. Sign up at: http://jimmunol.org/alerts The Journal of Immunology is published twice each month by The American Association of Immunologists, Inc., 1451 Rockville Pike, Suite 650, Rockville, MD 20852 Copyright © 2017 by The American Association of Immunologists, Inc. All rights reserved. Print ISSN: 0022-1767 Online ISSN: 1550-6606. Th eJournal of Brief Reviews Immunology Contact, Collaboration, and Conflict: Signal Integration of Syk-Coupled C-Type Lectin Receptors Jenny Ostrop*,† and Roland Lang‡ Several spleen tyrosine kinase–coupled C-type lectin of TLRs and crosstalk of TLR signaling have been studied for receptors (CLRs) have emerged as important pattern almost two decades. -
Cryptococcus Gattii Outbreak
The recent Cryptococcus gattii outbreak A deadly pathway… From Trees to Lungs to Brain ryptococcus gattii disease. The route of C has been in the infection is from breathing the news lately, due to a recent airborne organism, which outbreak in the Pacific becomes lodged in the Northwest. This new, more pulmonary tissues. virulent strain is expected to by Jay Hardy, CLS, SM (NRCM) spread further throughout the Symptoms Northwest and Northern California in the coming The pulmonary disease, Jay Hardy is the founder and months. known as cpryptococcosis, president of Hardy Diagnostics. develops slowly. After He began his career in exposure it can take two to microbiology as a Medical Technologist in Santa Barbara, twelve months for symptoms California. to appear, with the usual onset In 1980, he began at six or seven months. manufacturing culture media for the local hospitals. Today, The symptoms include: Hardy Diagnostics is the third largest media manufacturer in the U.S. • Cough that lasts weeks or months To ensure rapid and reliable turn around time, Hardy • Sharp chest pain Figure 1: An India ink stain Diagnostics maintains six • Unexplained shortness of showing the capsule surrounding distribution centers, and breath produces over 3,000 products the C. gattii cells in the yeast form used in clinical and industrial at 1,000X. Photo from Haley/CDC. • Severe headache microbiology laboratories • Confusion throughout the world. The organism is a fungus that • Fever is usually found in the soil • Night sweats www.HardyDiagnostics.com and on trees. It is not spread • Unintended weight loss from human to human or animal to human. -
Idiopathic CD4 Lymphocytopenia Presenting As Refractory Cryptococcal Meningitis
Case Report Idiopathic CD4 lymphocytopenia presenting as refractory cryptococcal meningitis A. Sharma, V. Lal, M. Modi, D. Khurana, S. Bal, S. Prabhakar Department of Neurology, Postgraduate Institute of Medical Education and Research, Chandigarh-160 012, India Abstract Idiopathic CD4 T-lymphocytopenia (ICL) is a syndrome characterized by depletion of CD4 T-cells without evidence of human immunodeficiency virus (HIV) infection. There are a few reported cases of ICL associated with different diseases and clinical conditions, most commonly the opportunistic infections like Tuberculosis, fungal and parasitic diseases which are also seen in HIV-positive patients. We report a case without risk factors or laboratory evidence of HIV infection who presented with refractory cryptococcal meningitis and was found to have ICL. Key Words Cryptococcus, CD4, idiopathic For correspondence: Dr. Vivek Lal, Department of Neurology, PGIMER, Sector-12, Chandigarh-160 012, India. E-mail: [email protected] Ann Indian Acad Neurol 2010;13:136-8 [DOI: 10.4103/0972-2327.64646] Introduction and decreased pain and temperature sensation in the right half of the body, with sparing of the face. The neurological Idiopathic CD4 lymphocytopenia (ICL) was defi ned by the examination was otherwise normal. Plain magnetic resonance United States Centers for Disease Control and Prevention imaging (MRI) brain revealed a T2 hyperintensity in the (CDC) as a clinical condition in patients with depressed left thalamus, extending to involve the left corona radiata numbers of circulating CD4 T lymphocytes (<300 cells/µl or [Figure 1]. There was no meningeal enhancement on contrast- <20% of total T cells) at a minimum of two separate time points enhanced MRI. -
Safety Precautions for Working with Cryptococcus Neoformans
Safety Precautions for Working with Cryptococcus neoformans The basidiomycete fungus Cryptococcus neoformans is an invasive opportunistic pathogen of the central nervous system and the most frequent cause of fungal meningitis worldwide. Although Cryptococcus is a problem in the United States, it is significantly more prevalent and especially devastating in the developing world, such as sub-Saharan Africa, resulting in in more than 625,000 deaths per year worldwide. C. neoformans survives in the environment within soil, trees, and bird guano, where it can interact with wild animals or microbial predators, maintaining its virulence. Human infection is thought to be acquired by inhalation of desiccated yeast cells or spores from an environmental source. C. neoformans can colonize the host respiratory tract without producing any disease. Infection is typically asymptomatic, and it can be either cleared or enter a dormant, latent form. When host immunity is compromised, the dormant form can be reactivated and disseminate hematogenously to cause systemic infection. C. neoformans can infect or spread to any organ to cause localized infections involving the skin, eyes, myocardium, bones, joints, lungs, prostate gland, or urinary tract, in addition to its propensity to infect the central nervous systems. The following diseases and medications are risk factors for C. neoformans infection and are associated with at least some degree of immunosuppression: Ø HIV/AIDs (CD4 < 100cells/mm) Ø Corticosteroids or other immunosuppressive medications for cancer, chemotherapy, or organ transplants Ø Solid organ transplantations Ø Diabetes mellitus Ø Heart, lung, or liver disease Ø Pregnancy Even otherwise healthy, fully immunocompetent individuals can develop cryptococcosis, as may well be the case in a lab accident. -
Gene List HTG Edgeseq Immuno-Oncology Assay
Gene List HTG EdgeSeq Immuno-Oncology Assay Adhesion ADGRE5 CLEC4A CLEC7A IBSP ICAM4 ITGA5 ITGB1 L1CAM MBL2 SELE ALCAM CLEC4C DST ICAM1 ITGA1 ITGA6 ITGB2 LGALS1 MUC1 SVIL CDH1 CLEC5A EPCAM ICAM2 ITGA2 ITGAL ITGB3 LGALS3 NCAM1 THBS1 CDH5 CLEC6A FN1 ICAM3 ITGA4 ITGAM ITGB4 LGALS9 PVR THY1 Apoptosis APAF1 BCL2 BID CARD11 CASP10 CASP8 FADD NOD1 SSX1 TP53 TRAF3 BCL10 BCL2L1 BIRC5 CASP1 CASP3 DDX58 NLRP3 NOD2 TIMP1 TRAF2 TRAF6 B-Cell Function BLNK BTLA CD22 CD79A FAS FCER2 IKBKG PAX5 SLAMF1 SLAMF7 SPN BTK CD19 CD24 EBF4 FASLG IKBKB MS4A1 RAG1 SLAMF6 SPI1 Cell Cycle ABL1 ATF1 ATM BATF CCND1 CDK1 CDKN1B NCL RELA SSX1 TBX21 TP53 ABL2 ATF2 AXL BAX CCND3 CDKN1A EGR1 REL RELB TBK1 TIMP1 TTK Cell Signaling ADORA2A DUSP4 HES1 IGF2R LYN MAPK1 MUC1 NOTCH1 RIPK2 SMAD3 STAT5B AKT3 DUSP6 HES5 IKZF1 MAF MAPK11 MYC PIK3CD RNF4 SOCS1 STAT6 BCL6 ELK1 HEY1 IKZF2 MAP2K1 MAPK14 NFATC1 PIK3CG RORC SOCS3 SYK CEBPB EP300 HEY2 IKZF3 MAP2K2 MAPK3 NFATC3 POU2F2 RUNX1 SPINK5 TAL1 CIITA ETS1 HEYL JAK1 MAP2K4 MAPK8 NFATC4 PRKCD RUNX3 STAT1 TCF7 CREB1 FLT3 HMGB1 JAK2 MAP2K7 MAPKAPK2 NFKB1 PRKCE S100B STAT2 TYK2 CREB5 FOS HRAS JAK3 MAP3K1 MEF2C NFKB2 PTEN SEMA4D STAT3 CREBBP GATA3 IGF1R KIT MAP3K5 MTDH NFKBIA PYCARD SMAD2 STAT4 Chemokine CCL1 CCL16 CCL20 CCL25 CCL4 CCR2 CCR7 CX3CL1 CXCL12 CXCL3 CXCR1 CXCR6 CCL11 CCL17 CCL21 CCL26 CCL5 CCR3 CCR9 CX3CR1 CXCL13 CXCL5 CXCR2 MST1R CCL13 CCL18 CCL22 CCL27 CCL7 CCR4 CCRL2 CXCL1 CXCL14 CXCL6 CXCR3 PPBP CCL14 CCL19 CCL23 CCL28 CCL8 CCR5 CKLF CXCL10 CXCL16 CXCL8 CXCR4 XCL2 CCL15 CCL2 CCL24 CCL3 CCR1 CCR6 CMKLR1 CXCL11 CXCL2 CXCL9 CXCR5 -
C-Type Lectins in Veterinary Species: Recent Advancements and Applications
International Journal of Molecular Sciences Review C-Type Lectins in Veterinary Species: Recent Advancements and Applications Dimitri Leonid Lindenwald and Bernd Lepenies * Immunology Unit & Research Center for Emerging Infections and Zoonoses (RIZ), University for Veterinary Medicine Hannover, Foundation, 30559 Hannover, Germany; [email protected] * Correspondence: [email protected]; Tel.: +49-(0)5-11/953-6135 Received: 29 June 2020; Accepted: 17 July 2020; Published: 20 July 2020 Abstract: C-type lectins (CTLs), a superfamily of glycan-binding receptors, play a pivotal role in the host defense against pathogens and the maintenance of immune homeostasis of higher animals and humans. CTLs in innate immunity serve as pattern recognition receptors and often bind to glycan structures in damage- and pathogen-associated molecular patterns. While CTLs are found throughout the whole animal kingdom, their ligand specificities and downstream signaling have mainly been studied in humans and in model organisms such as mice. In this review, recent advancements in CTL research in veterinary species as well as potential applications of CTL targeting in veterinary medicine are outlined. Keywords: C-type lectin; glycans; immune modulation; comparative immunology; veterinary immunology 1. Introduction Glycans belong to the most abundant macromolecules constituting all living organisms. In multicellular animals, processes such as cell migration, homeostasis maintenance, and innate immune signaling rely on the ability of cells to recognize glycoconjugates, most often in the form of glycoproteins and glycolipids, via glycan binding proteins, the so-called lectins [1]. In the immune system, lectin receptors are either secreted or found on the cell surface of immune cells [2]. -
Environmental Factors That Contribute to the Maintenance of Cryptococcus Neoformans Pathogenesis
microorganisms Review Environmental Factors That Contribute to the Maintenance of Cryptococcus neoformans Pathogenesis Maphori Maliehe, Mathope A. Ntoi, Shayanki Lahiri, Olufemi S. Folorunso , Adepemi O. Ogundeji , Carolina H. Pohl and Olihile M. Sebolai * Department of Microbial, Biochemical and Food Biotechnology, University of the Free State, Bloemfontein 9301, Free State, South Africa; [email protected] (M.M.); [email protected] (M.A.N.); [email protected] (S.L.); [email protected] (O.S.F.); [email protected] (A.O.O.); [email protected] (C.H.P.) * Correspondence: [email protected]; Tel.: +27-(0)51-401-2004 Received: 15 November 2019; Accepted: 11 December 2019; Published: 28 January 2020 Abstract: The ability of microorganisms to colonise and display an intracellular lifestyle within a host body increases their fitness to survive and avoid extinction. This host–pathogen association drives microbial evolution, as such organisms are under selective pressure and can become more pathogenic. Some of these microorganisms can quickly spread through the environment via transmission. The non-transmittable fungal pathogens, such as Cryptococcus, probably return into the environment upon decomposition of the infected host. This review analyses whether re-entry of the pathogen into the environment causes restoration of its non-pathogenic state or whether environmental factors and parameters assist them in maintaining pathogenesis. Cryptococcus (C.) neoformans is therefore used as a model organism to evaluate the impact of environmental stress factors that aid the survival and pathogenesis of C. neoformans intracellularly and extracellularly. Keywords: Cryptococcus; environmental factors; pathogenesis; survival; virulence factors; transcriptional factors; signalling factors 1. Introduction The genus Cryptococcus is defined by basidiomycetous fungi that can transform into a yeast state [1]. -
Beryllium-Induced Lung Disease Exhibits Expression Profiles Similar to Sarcoidosis
ORIGINAL ARTICLE BERYLLIUM-INDUCED LUNG DISEASE Beryllium-induced lung disease exhibits expression profiles similar to sarcoidosis Li Li1,2, Lori J. Silveira1, Nabeel Hamzeh1,2, May Gillespie1, Peggy M. Mroz1, Annyce S. Mayer1,2,3, Tasha E. Fingerlin1 and Lisa A. Maier1,2,3 Affiliations: 1Dept of Medicine, National Jewish Health, Denver, CO, USA. 2Division of Pulmonary and Critical Care Sciences, Dept of Medicine, School of Medicine, Denver, CO, USA. 3Environmental Occupational Health Dept, School of Public Health, University of Colorado, Denver, CO, USA. Correspondence: Li Li, Division of Environmental and Occupational Health Sciences, Dept of Medicine, National Jewish Health, 1400 Jackson Street, Denver, CO 80206, USA. E-mail: [email protected] ABSTRACT A subset of beryllium-exposed workers develop beryllium sensitisation (BeS) which precedes chronic beryllium disease (CBD). We conducted an in-depth analysis of differentially expressed candidate genes in CBD. We performed Affymetrix GeneChip 1.0 ST array analysis on peripheral blood mononuclear cells (PBMCs) from 10 CBD, 10 BeS and 10 beryllium-exposed, nondiseased controls stimulated with BeSO4 or medium. The differentially expressed genes were validated by high-throughput real-time PCR in this group and in an additional group of cases and nonexposed controls. The functional roles of the top candidate genes in CBD were assessed using a pharmacological inhibitor. CBD gene expression data were compared with whole blood and lung tissue in sarcoidosis from the Gene Expression Omnibus. We confirmed almost 450 genes that were significantly differentially expressed between CBD and controls. The top enrichment of genes was for JAK ( Janus kinase)–STAT (signal transducer and activator of transcription) signalling. -
Pulmonary Cryptococcus Infections As a Manifestation of Idiopathic CD4 Lymphocytopenia: Case Report and Literature Review
University of Calgary PRISM: University of Calgary's Digital Repository Libraries & Cultural Resources Open Access Publications 2019-10-17 Pulmonary Cryptococcus infections as a manifestation of idiopathic CD4 lymphocytopenia: case report and literature review Thornton, Christina S; Larios, Oscar; Grossman, Jennifer; Griener, Thomas P; Vaughan, Steven BMC Infectious Diseases. 2019 Oct 17;19(1):862 http://hdl.handle.net/1880/111155 Journal Article Downloaded from PRISM: https://prism.ucalgary.ca Thornton et al. BMC Infectious Diseases (2019) 19:862 https://doi.org/10.1186/s12879-019-4453-x CASE REPORT Open Access Pulmonary Cryptococcus infections as a manifestation of idiopathic CD4 lymphocytopenia: case report and literature review Christina S. Thornton1* , Oscar Larios2, Jennifer Grossman3, Thomas P. Griener4 and Steven Vaughan2 Abstract Background: Idiopathic CD4 lymphocytopenia (ICL) is a rare clinical disease with relative CD4 deficiency in the absence of HIV infection. The pathogenicity of ICL is poorly understood with an unclear incidence rate in the general population. Sequelae of ICL includes AIDS-defining infections, which most commonly includes Cryptococcus neoformans. Typically, C. neoformans infections present with CNS involvement but rarely with extra-CNS manifestations. Here, we present a rare case of ICL with exclusively primary pulmonary cryptococcus and a review of the literature. Case presentation: A 56-year-old female presented to our tertiary care hospital requiring a right hip open reduction intervention. The patient became febrile during admission, prompting a work-up that included a chest X-ray showing a peripheral pulmonary solitary nodule. Transthoracic biopsy revealed encapsulated yeast forms in keeping with C. neoformans. CD4 counts, repeated at least one month apart, were < 200 cells/mm3, with negative HIV testing.