UCSD Center for Chronobiology
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CURRICULUM VITAE Joseph S. Takahashi Howard Hughes Medical
CURRICULUM VITAE Joseph S. Takahashi Howard Hughes Medical Institute Department of Neuroscience University of Texas Southwestern Medical Center 5323 Harry Hines Blvd., NA4.118 Dallas, Texas 75390-9111 (214) 648-1876, FAX (214) 648-1801 Email: [email protected] DATE OF BIRTH: December 16, 1951 NATIONALITY: U.S. Citizen by birth EDUCATION: 1981-1983 Pharmacology Research Associate Training Program, National Institute of General Medical Sciences, Laboratory of Clinical Sciences and Laboratory of Cell Biology, National Institutes of Health, Bethesda, MD 1979-1981 Ph.D., Institute of Neuroscience, Department of Biology, University of Oregon, Eugene, Oregon, Dr. Michael Menaker, Advisor. Summer 1977 Hopkins Marine Station, Stanford University, Pacific Grove, California 1975-1979 Department of Zoology, University of Texas, Austin, Texas 1970-1974 B.A. in Biology, Swarthmore College, Swarthmore, Pennsylvania PROFESSIONAL EXPERIENCE: 2013-present Principal Investigator, Satellite, International Institute for Integrative Sleep Medicine, World Premier International Research Center Initiative, University of Tsukuba, Japan 2009-present Professor and Chair, Department of Neuroscience, UT Southwestern Medical Center 2009-present Loyd B. Sands Distinguished Chair in Neuroscience, UT Southwestern 2009-present Investigator, Howard Hughes Medical Institute, UT Southwestern 2009-present Professor Emeritus of Neurobiology and Physiology, and Walter and Mary Elizabeth Glass Professor Emeritus in the Life Sciences, Northwestern University -
What Does It Take to Be X-Class?
Solar Flares: What Does It Take to Be X-Class? Sun Emits an X-Class Flare On August 9 3 'Uneducated Guesses' 5 Study of Abalone Yields New Insights Into Sexual Reproduction 8 Japan's Tohoku Tsunami Created Icebergs in Antarctica 11 DNA Building Blocks Can Be Made in Space, NASA Evidence Suggests 14 Genetically Modified 'Serial Killer' T-Cells Obliterate Tumors in Leukemia Patients 16 Engineers Reverse E. Coli Metabolism for Quick Production of Fuels, Chemicals 19 Diamond‘s Quantum Memory 21 New Microscope Reveals Nanoscale Details 23 Chimpanzees Are Spontaneously Generous After All, Study Shows 26 The Thrill of Boredom 28 Genetic Basis for Muscle Endurance Discovered in Animal Study 31 Scientist Develops Virus That Targets HIV: Using a Virus to Kill a Virus 34 In Auto Test in Europe, Meter Ticks Off Miles, and Fee to Driver 36 Humankind‘s Ascent Took Path of Yeast Resistance 39 With Photovoltaic Polarizers, Devices Could Be Powered by Sunlight, Own Backlight 43 Severe Low Temperatures Devastate Coral Reefs in Florida Keys 45 Billion-Year-Old Piece of North America Traced Back to Antarctica 47 When East Met West Under the Buddha‘s Gaze 50 Math Ability Is Inborn, New Research Suggests 53 Were the best world leaders mentally ill? 56 'Amino Acid Time Capsule': New Way to Date the Past 59 Reality check: Why dreams aren't what they seem 61 New Conducting Properties Discovered in Bacteria-Produced Wires 64 Genomic Biomarker Signature Can Predict Skin Sensitizers, Study Finds 66 Nanoparticle Size Is Readily Controlled to Make Stronger Aluminum -
SKA-Athena Synergy White Paper
SKA-Athena Synergy White Paper SKA-Athena Synergy Team July 2018. Edited by: Francisco J. Carrera and Silvia Martínez-Núñez on behalf of the Athena Community Office. Revisions provided by: Judith Croston, Andrew C. Fabian, Robert Laing, Didier Barret, Robert Braun, Kirpal Nandra Authorship Authors Rossella Cassano (INAF-Istituto di Radioastronomia, Italy). • Rob Fender (University of Oxford, United Kingdom). • Chiara Ferrari (Observatoire de la Côte d’Azur, France). • Andrea Merloni (Max-Planck Institute for Extraterrestrial Physics, Germany). • Contributors Takuya Akahori (Kagoshima University, Japan). • Hiroki Akamatsu (SRON Netherlands Institute for Space Research, The Netherlands). • Yago Ascasibar (Universidad Autónoma de Madrid, Spain). • David Ballantyne (Georgia Institute of Technology, United States). • Gianfranco Brunetti (INAF-Istituto di Radioastronomia, Italy) and Maxim Markevitch (NASA-Goddard • Space Flight Center, United States). Judith Croston (The Open University, United Kingdom). • Imma Donnarumma (Agenzia Spaziale Italiana, Italy) and E. M. Rossi (Leiden Observatory, The • Netherlands). Robert Ferdman (University of East Anglia, United Kingdom) on behalf of the SKA Pulsar Science • Working Group. Luigina Feretti (INAF-Istituto di Radioastronomia, Italy) and Federica Govoni (INAF Osservatorio • Astronomico,Italy). Jan Forbrich (University of Hertfordshire, United Kingdom). • Giancarlo Ghirlanda (INAF-Osservatorio Astronomico di Brera and University Milano Bicocca, Italy). • Adriano Ingallinera (INAF-Osservatorio Astrofisico di Catania, Italy). • Andrei Mesinger (Scuola Normale Superiore, Italy). • Vanessa Moss and Elaine Sadler (Sydney Institute for Astronomy/CAASTRO and University of Sydney, • Australia). Fabrizio Nicastro (Osservatorio Astronomico di Roma,Italy), Edvige Corbelli (INAF-Osservatorio As- • trofisico di Arcetri, Italy) and Luigi Piro (INAF, Istituto di Astrofisica e Planetologia Spaziali, Italy). Paolo Padovani (European Southern Observatory, Germany). • Francesca Panessa (INAF/Istituto di Astrofisica e Planetologia Spaziali, Italy). -
Biotechnology School of Biotechnology G.M
Programme Structure Post Graduate in Biotechnology School of Biotechnology G.M. University, Sambalpur Post graduate programme comprising two years, will be divided into 4 (four) semesters each of six months duration. Year Semesters First Year Semester I Semester II Second Year Semester III Semester IV The detail of title of papers, credit hours, division of marks etc of all the papers of all semesters is given below. There will be two elective groupsnamely: Discipline Specific Elective in SemII. Interdisciplinary Elective in SemIII. A student has to select one of the DSE paper in Sem II and one of the papers in Sem III as offered by the department at the beginning of the semester II and semester IIIrespectively. Each paper will be of 100 marks out of which 80 marks shall be allocated for semester examination and 20 marks for internal assessment (Mid TermExamination). There will be four lecture hours of teaching per week for eachpaper. Duration of examination of each paper shall be of threehours. Pass Percentage: The minimum marks required to pass any paper shall be 40 percent in each paper and 40 percent in aggregate of asemester. No students will be allowed to avail more than three (3) chances to pass in any paper inclusive of first attempt. Semester-1 Papers Marks Total Duration Credit Paper No Title Mid End Marks (Hrs) Hours Term Term 101 Cell & Molecular Biology 20 80 100 4 4 102 Microbiology 20 80 100 4 4 103 Biochemistry 20 80 100 4 4 104 Genetics 20 80 100 4 4 105 Lab course 100 100 4 4 Total 500 20 20 Semester-2 Papers Marks Total Duration Credit Paper Title Mid End Marks (Hrs) Hours No Term Term 201 Genetic Engineering 20 80 100 4 4 202 Instrumentation and Computer 20 80 100 4 4 Techniques 1 | P a g e 203 Biostatistics and Basics of 20 80 100 4 4 Bioinformatics 204 Developmental Biology (Plant & 20 80 100 4 4 Animal) 205 Lab course 100 100 4 4 DSEPapers* 206 A Animal Physiology 20 80 100 4 4 206 B Plant Physiology 20 80 100 4 4 206 C Bioenergetics and Metabolism 20 80 100 4 4 Total 600 24 *Discipline Specific Elective Paper. -
Kaic Cii Ring Flexibility Governs the Rhythm of The
KAIC CII RING FLEXIBILITY GOVERNS THE RHYTHM OF THE CIRCADIAN CLOCK OF CYANOBACTERIA A Dissertation by NAI-WEI KUO Submitted to the Office of Graduate Studies of Texas A&M University in partial fulfillment of the requirements for the degree of DOCTOR OF PHILOSOPHY May 2011 Major Subject: Biochemistry KAIC CII RING FLEXIBILITY GOVERNS THE RHYTHM OF THE CIRCADIAN CLOCK OF CYANOBACTERIA A Dissertation by NAI-WEI KUO Submitted to the Office of Graduate Studies of Texas A&M University in partial fulfillment of the requirements for the degree of DOCTOR OF PHILOSOPHY Approved by: Co-Chairs of Committee, Andy LiWang Pingwei Li Committee Members, Deborah Bell-Pedersen Frank Raushel Head of Department, Gregory Reinhart May 2011 Major Subject: Biochemistry iii ABSTRACT KaiC CII Ring Flexibility Governs the Rhythm of the Circadian Clock of Cyanobacteria. (May 2011) Nai-Wei Kuo, B.S.; M.S., National Tsing Hua University, Taiwan Co-Chairs of Advisory Committee: Dr. Andy LiWang, Dr. Pingwei Li The circadian clock orchestrates metabolism and cell division and imposes important consequences to health and diseases, such as obesity, diabetes, and cancer. It is well established that phosphorylation-dependent circadian rhythms are the result of circadian clock protein interactions, which regulate many intercellular processes according to time of day. The phosphorylation-dependent circadian rhythm undergoes a succession of phases: Phosphorylation Phase → Transition Phase → Dephosphorylation Phase. Each phase induces the next phase. However, the mechanism of each phase and how the phosphorylation and dephosphorylation phases are prevented from interfering with each other remain elusive. In this research, we used a newly developed isotopic labeling strategy in combination with a new type of nuclear magnetic resornance (NMR) experiment to obtain the structural and dynamic information of the cyanobacterial KaiABC oscillator system. -
Math and Science
Stamford Public Schools 2010-2011 School Year Report to the Community Interim Superintendent Winifred Hamilton, Ph.D. Board of Education, 2010-2011 Polly Rauh, Ed.D., President Jackie Heftman Jerry Pia, Vice President John Leydon, Jr. Lorraine Olson, Secretary Richard Lyons, II Geoff Alswanger, Assistant Secretary Steven Polo Mayor Michael Pavia Julia Wade INTERIM SUPERINTENDENT’S HIGHLIGHTS OF THE 2010-2011 SCHOOL YEAR I am pleased to share with you the third annual Stamford Public Schools Report to the Community. In it, you will find many indicators of our system’s successes during the 2010- 2011 school year in the areas of student achievement, operational and fiscal improvements, and grant acquisitions. I am particularly proud of our students’ “You will see strong evidence that achievements in the area of college readiness. our students are motivated, engaged, More students than ever are taking four years of and ready to accept the challenges math and science. They are also taking and passing Advanced Placement of a rigorous course load.” courses in record numbers. At the middle school level, our efforts to add instructional time and standards-based curricula have led to substantial gains among multiple student groups in grade 7 reading, math, and writing. At the elementary level, the new standards-based math curriculum has been fully implemented in grades K-5, with a great deal of embedded professional development provided to staff. We are seeing steady improvement in math in the elementary grades with Stamford’s gains in math outpacing the state on the Connecticut Mastery Tests (CMTs). These data points emerge from the extremely hard work of our teachers, paraprofessionals, and administrators. -
Sugar Coated Sugar Has Become Notorious, with Countless Claims of Its Ill Effects on Health
HHMI BULLETIN N OV . ’11 VOL.24 • NO.04 • 4000 Jones Bridge Road Chevy Chase, Maryland 20815-6789 Hughes Medical Institute Howard www.hhmi.org Address Service Requested Sugar Coated Sugar has become notorious, with countless claims of its ill effects on health. But not all sugars are bad for you. Consider fucose, an essential sugar the body needs. Without it, neurons can’t communicate, kidneys can’t filter blood, and skin can’t stay hydrated. Chemical biologist Carolyn • Bertozzi and her group are trying to learn more about the role of fucose in www.hhmi.org development. To do this, they injected modified versions of fucose into live, single-celled zebrafish embryos. As the embryos developed, the altered fucose molecules were incorporated into the sugars that coat cell surfaces. Using a simple chemical reaction, the team attached a labeled probe molecule to the altered fucose so they could visualize its location in the developing embryo. In this image of a 19-hour-old zebrafish embryo, labeled fucose (red) glows in the peripheral cells. Just one of many ways chemistry is helping answer biological questions (see “Living Chemistry,” page 12). YEAR OF CHEMISTRY Chemists fascinated by the complexity of biology are solving problems in neuroscience, immunology, and cell signaling. v ol. 24 / no. no. / Karen Dehnert and Scott Laughlin / Bertozzi lab In This Issue: Traveling Microscope / Lemur vs Mouse / Spotlight on Science Teacher Training 04 ObservatiOns ThE GIvInG TREE The history of science overflows with captivating stories of break- Johann Kraut in 1869 and Hermann Kolbe in 1874, but then, unfortunately, throughs that led to innovative disease treatments. -
Fifth-Year Assessment of Baylor University Major Strategic Proposal
Fifth-Year Assessment of Baylor University Major Strategic Proposal (MSP) “Research Initiative in Terrestrial Paleoclimatology”: Faculty and Student Research Accomplishments, 2007, 2008, 2009, 2010, 2011, 2012 (partial) Executive Summary: The Terrestrial Paleoclimatology Research Initiative, an MSP initially funded by Baylor University beginning in 2007, that currently (October 29, 2012) consists of 6 Geology Faculty and one post-doc, has seen important growth and advancements of the initiative over the past 5 years, which are reported in detail in what follows. Especially noteworthy for this summary are the following: 1) Seven Ph.D. students (Drs. Ahr, Cleveland, Kahmann-Robinson, Mintz, Shunk, Stinchcomb, and Trendell) and two M.S. students (Bongino, Dhillon) have graduated, along with 12 B.S. Senior Thesis students. Three Ph.D. students (Jennings, Meier, and Michel) and two M.S. students (Culbertson and Felda) are anticipated to graduate in 2012-2013. There are currently 11 graduate students (3 M.S., 8 Ph.D.) and 4 B.S. students engaged in thesis research in the program. Three new graduate students (all Ph.D.) were recruited starting fall semester, 2012. 2) Faculty have published 97 total peer-reviewed journal articles (27 so far in 2012, 19 in 2011, 20 in 2010, 11 in 2009, 10 in 2008, and 10 in 2007), indicating a strong positive increase in research output. Of the peer-reviewed journal articles, 18 were first-authored by 7 Ph.D. students. Faculty and students gave 168 total presentations at professional meetings (24 in 2012 so far, 44 in 2011, 39 in 2010, 27 in 2009, 17 in 2008, and 17 in 2007), indicating a strong presence at professional presentations. -
Chronobiology an Internal Clock L for All Seasons
Eommsnts” EUGENE GARFIELD ~: INSTITUTE FOR SCIENTIFIC lNFORMATION~ 3501 MARKET ST,, PHILADELPHIA, PA 19104 %;%%%?% Chronobiology An Internal Clock L for All Seasons. Part 1. The Development of the Science k of Biological Rhythm Number 1 January 4, 1988 The lives of virtually all plants and animals, from the simplest one-celled organisms to humans, are governed by a variety of internal biological rhythms. This essay (the first of two parts) discusses chronobiology, the study of these biological clocks. Biological periodicities may range from ultradi- an and circadian to circahmar and circasrnualcycles. Using ISI” data, we trace the development of the field from its earliest underpismirrgsin botany and zoology and identify the authors of Citation Ck.rsics”, such as Jurgen Aschoff, Erwin Burming, and Colin S. Phtendrigh. Living organisms exhibit myriad cycles. ing to the daily rise and fall of the sun. In- Annually, the leaves of deciduous trees in deed, so familiar are these rhythms that, ac- the temperate zones turn brilliant hues of cording to pharmacologists Joseph S. Tak- yellow, orange, and red as the days shorten ahashi and Martin Zatz, Laboratory of Clin- and winter approaches. Each year, anirnrds ical Science, National Institute of Mentaf go through cycles related to reproduetion; Health, Bethesda, Maryland, they did not most of those in the temperate zones also elicit systematic, scholarly investigation until experience rhythms that prepare them for the the 1700s.7 Since that time, however, the period of inactivity that comes with winter. study of these biological rhythms has Cycles that take less than a year to com- slowly coalesced into the science of chro- plete are also plentiful. -
Integrative Physiology 1
Integrative Physiology 1 Bustamante, Heidi Margarita (https://experts.colorado.edu/display/ INTEGRATIVE PHYSIOLOGY fisid_146491/) Senior Instructor; MS, University of Colorado Boulder Physiology is the field of biology that deals with function in living organisms. The academic foundation of the department is the knowledge Byrnes, William (https://experts.colorado.edu/display/fisid_100643/) of how humans and animals function at the level of genes, cells, organs Associate Professor Emeritus; PhD, University of Wisconsin–Madison and systems. Our multidisciplinary curriculum requires students to take Carey, Cynthia foundational courses in anatomy, mathematics, physics, physiology and Professor Emerita statistics. With this basic knowledge, students can undertake a flexible curriculum that includes the study of biomechanics, cell physiology, Casagrand, Janet L. (https://experts.colorado.edu/display/fisid_100934/) endocrinology, immunology, exercise physiology, neurophysiology and Senior Instructor; PhD, Case Western Reserve University sleep physiology. The department also encourages student participation in research. DeSouza, Christopher A. (https://experts.colorado.edu/display/ fisid_107460/) Students completing a degree in integrative physiology are expected to Professor; PhD, University of Maryland, College Park acquire the ability and skills to: Eaton, Robert • read, evaluate and synthesize information from the research literature Professor Emeritus on integrative physiology; • observe living organisms and be able to understand the physiological Ehringer, Marissa A. (https://experts.colorado.edu/display/fisid_126595/) principles underlying function; Associate Professor; PhD, University of Colorado Denver • be able to interpret movement and performance data from laboratory Enoka, Roger M. (https://experts.colorado.edu/display/fisid_110122/) measurements; and Professor; PhD, University of Washington • communicate the outcome of an investigation and its contribution to the body of knowledge on integrative physiology. -
International School of Human Chronobiology and Working Life
International School of Human Chronobiology and Working Life August 8 - 12 2016 1.5 Bologna Credits Stockholm Stress Center International School of Human Chrono- biology and Working Life – August 8-12, 2016 Welcome to this years summer course in August 8-12th in Stockholm! We have put together a program that includes the most inspiring, competent and well-known teachers within the field of chronobiology and wor- king life. The lectures will span from molecular clockworks to study designs. The course is held at the campus of Stockholm University, School of Public Health and Stress Research Institute. The course will be based on semi- nars with rich opportunities to meet professors and PhD students close to or within the field of chronobiology, but also in an informal way enjoying the summers season. For social events we are dependent on the weather but there are plans for barbecues, swimming in the lake (50 metres from the Stress Research Institute), pubcrawl in Stockholm, Viking Chess (trad Swedish lawn game) or running around the lake Course leader will be Arne Lowden ([email protected]) and Claudia Moreno ([email protected]) and it is supported by the School of Public Health and the Stockholm Stress Center Graduate School. Teachers John Axelsson – Karolinska Institutet, Sweden Arne Lowden – Stockholm University, Sweden Claudia Moreno – University of São Paulo, Brazil/Stockholm University, Sweden. Malcolm von Schantz - University of Surrey, UK Debra J. Skene – University of Surrey, UK Kenneth Wright - University of Colorado, US Torbjörn Åkerstedt – Karolinska Institutet, Sweden Course plan Course aimed for PhD students International School of Human Chronobiology and Working Life Institution School of Public Health, Stress Research Institute, Stockholm University Area Public Health Registration deadline July 5th, send E-mail to course leader Arne Lowden ([email protected]), include full name, and address, moti- vation and if possible date for acceptance to PhD program. -
Introduction to Chronobiology Chronobiology Is a Multidisciplinary Branch of Science Dealing with Study of Biological Rhythms
Introduction to Chronobiology Chronobiology is a multidisciplinary branch of science dealing with study of biological rhythms. The free-running biological rhythms reflect the endogenous mechanisms of cyclic temporization whose expression is morphologically seen as an internal clock called body clock. All levels of biological integration ranging from ecosystem to subcellular structures exhibit rhythms with diverse frequencies. Periods of most of the documented biological rhythms match with that of any one of geophysical cycles present in the nature. Though circadian rhythms are the most prominent one, ultradian, infradian and circannual rhythms also play vital role in chronobiological homeostasis. Circadian rhythms are generated by an internal clock, or pacemaker. Therefore, even in the absence of cues indicating the time or length of day, circadian rhythms persist. Circadian rhythms exist even in single cells. In fact, studies have shown that a wide range of cell functions exhibit circadian rhythms. Specific genes called clock genes code for circadian rhythms. Genetic control of circadian rhythms has been examined most extensively in the fruit fly. In mammals, considerable experimental evidence indicates that a region of the brain called the suprachiasmatic nucleus (SCN) is the circadian pacemaker. The SCN, composed of a cluster of thousands of small nerve cells, is located within a region of the brain, called hypothalamus. Annual biological cycles are widespread in regions both at extreme latitudes as well as close to equator. Activities such as reproduction, growth, molt, migration, and hibernation are timed in an adaptive manner. The most widely used environmental cue for predicting favorable timing of breeding is photoperiod or day length.