Isoprene Rule Revisited 242:2 R9–R22 Endocrinology REVIEW Terpenes, Hormones and Life: Isoprene Rule Revisited
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PRODUCT INFORMATION Geranyl Pyrophosphate (Triammonium Salt) Item No
PRODUCT INFORMATION Geranyl Pyrophosphate (triammonium salt) Item No. 63320 CAS Registry No.: 116057-55-7 Formal Name: 3E,7-dimethyl-2,6-octadienyl- diphosphoric acid, triammonium salt Synonyms: GDP, Geranyl Diphosphate, GPP MF: C10H20O7P2 · 3NH3 FW: 365.3 O O Purity: ≥90% (NH +) – O P O P O Supplied as: A solution in methanol 4 3 Storage: -20°C O– O– Stability: ≥2 years Information represents the product specifications. Batch specific analytical results are provided on each certificate of analysis. Laboratory Procedures Geranyl pyrophosphate (triammonium salt) is supplied as a solution in methanol. To change the solvent, simply evaporate the methanol under a gentle stream of nitrogen and immediately add the solvent of choice. A stock solution may be made by dissoving the geranyl pyrophosphate (triammonium salt) in the solvent of choice. Geranyl pyrophosphate (triammonium salt) is slightly soluble in water. Description Geranyl pyrophosphate is an intermediate in the mevalonate pathway. It is formed from dimethylallyl pyrophosphate (DMAPP; Item No. 63180) and isopentenyl pyrophosphate by geranyl pyrophosphate synthase.1 Geranyl pyrophosphate is used in the biosynthesis of farnesyl pyrophosphate (Item No. 63250), geranylgeranyl pyrophosphate (Item No. 63330), cholesterol, terpenes, and terpenoids. Reference 1. Dorsey, J.K., Dorsey, J.A. and Porter, J.W. The purification and properties of pig liver geranyl pyrophosphate synthetase. J. Biol. Chem. 241(22), 5353-5360 (1966). WARNING CAYMAN CHEMICAL THIS PRODUCT IS FOR RESEARCH ONLY - NOT FOR HUMAN OR VETERINARY DIAGNOSTIC OR THERAPEUTIC USE. 1180 EAST ELLSWORTH RD SAFETY DATA ANN ARBOR, MI 48108 · USA This material should be considered hazardous until further information becomes available. -
Lanosterol 14Α-Demethylase (CYP51)
463 Lanosterol 14-demethylase (CYP51), NADPH–cytochrome P450 reductase and squalene synthase in spermatogenesis: late spermatids of the rat express proteins needed to synthesize follicular fluid meiosis activating sterol G Majdicˇ, M Parvinen1, A Bellamine2, H J Harwood Jr3, WWKu3, M R Waterman2 and D Rozman4 Veterinary Faculty, Clinic of Reproduction, Cesta v Mestni log 47a, 1000 Ljubljana, Slovenia 1Institute of Biomedicine, Department of Anatomy, University of Turku, Kiinamyllynkatu 10, FIN-20520 Turku, Finland 2Department of Biochemistry, Vanderbilt University School of Medicine, Nashville, Tennessee 37232–0146, USA 3Pfizer Central Research, Department of Metabolic Diseases, Box No. 0438, Eastern Point Road, Groton, Connecticut 06340, USA 4Institute of Biochemistry, Medical Center for Molecular Biology, Medical Faculty University of Ljubljana, Vrazov trg 2, SI-1000 Ljubljana, Slovenia (Requests for offprints should be addressed to D Rozman; Email: [email protected]) (G Majdicˇ is now at Department of Internal Medicine, UT Southwestern Medical Center, Dallas, Texas 75235–8857, USA) Abstract Lanosterol 14-demethylase (CYP51) is a cytochrome detected in step 3–19 spermatids, with large amounts in P450 enzyme involved primarily in cholesterol biosynthe- the cytoplasm/residual bodies of step 19 spermatids, where sis. CYP51 in the presence of NADPH–cytochrome P450 P450 reductase was also observed. Squalene synthase was reductase converts lanosterol to follicular fluid meiosis immunodetected in step 2–15 spermatids of the rat, activating sterol (FF-MAS), an intermediate of cholesterol indicating that squalene synthase and CYP51 proteins are biosynthesis which accumulates in gonads and has an not equally expressed in same stages of spermatogenesis. additional function as oocyte meiosis-activating substance. -
• Our Bodies Make All the Cholesterol We Need. • 85 % of Our Blood
• Our bodies make all the cholesterol we need. • 85 % of our blood cholesterol level is endogenous • 15 % = dietary from meat, poultry, fish, seafood and dairy products. • It's possible for some people to eat foods high in cholesterol and still have low blood cholesterol levels. • Likewise, it's possible to eat foods low in cholesterol and have a high blood cholesterol level SYNTHESIS OF CHOLESTEROL • LOCATION • All tissues • Liver • Cortex of adrenal gland • Gonads • Smooth endoplasmic reticulum Cholesterol biosynthesis and degradation • Diet: only found in animal fat • Biosynthesis: primarily synthesized in the liver from acetyl-coA; biosynthesis is inhibited by LDL uptake • Degradation: only occurs in the liver • Cholesterol is only synthesized by animals • Although de novo synthesis of cholesterol occurs in/ by almost all tissues in humans, the capacity is greatest in liver, intestine, adrenal cortex, and reproductive tissues, including ovaries, testes, and placenta. • Most de novo synthesis occurs in the liver, where cholesterol is synthesized from acetyl-CoA in the cytoplasm. • Biosynthesis in the liver accounts for approximately 10%, and in the intestines approximately 15%, of the amount produced each day. • Since cholesterol is not synthesized in plants; vegetables & fruits play a major role in low cholesterol diets. • As previously mentioned, cholesterol biosynthesis is necessary for membrane synthesis, and as a precursor for steroid synthesis including steroid hormone and vitamin D production, and bile acid synthesis, in the liver. • Slightly less than half of the cholesterol in the body derives from biosynthesis de novo. • Most cells derive their cholesterol from LDL or HDL, but some cholesterol may be synthesize: de novo. -
Natural Isoprenoids Are Able to Reduce Inflammation in a Mouse
0031-3998/08/6402-0177 Vol. 64, No. 2, 2008 PEDIATRIC RESEARCH Printed in U.S.A. Copyright © 2008 International Pediatric Research Foundation, Inc. Natural Isoprenoids are Able to Reduce Inflammation in a Mouse Model of Mevalonate Kinase Deficiency ANNALISA MARCUZZI, ALESSANDRA PONTILLO, LUIGINA DE LEO, ALBERTO TOMMASINI, GIULIANA DECORTI, TARCISIO NOT, AND ALESSANDRO VENTURA Department of Reproductive and Developmental Sciences [A.M., L.L., A.T., TN, A.V.], Department of Biomedical Sciences [G.D.], University of Trieste, 34137 Trieste, Italy; Paediatric Division [A.P., A.T., T.N., A.V.], Institute of Child Health IRCCS Burlo Garofolo, 34137 Trieste, Italy ABSTRACT: Mevalonate kinase deficiency (MKD) is a rare ataxia, cerebellar atrophy, psychomotor retardation, and may disorder characterized by recurrent inflammatory episodes and, in die in early childhood (1). most severe cases, by psychomotor delay. Defective synthesis of HIDS patients usually are treated with anti-inflammatory isoprenoids has been associated with the inflammatory phenotype drugs and in particular corticosteroids; thalidomide is also in these patients, but the molecular mechanisms involved are still used but its effect is limited (2). In most severe cases, patients poorly understood, and, so far, no specific therapy is available for may benefit from treatment with biologic agents such as this disorder. Drugs like aminobisphosphonates, which inhibit the etanercept and anakinra (1,3–5). No treatment has been mevalonate pathway causing a relative defect in isoprenoids proven effective in curing the neurological symptoms in se- synthesis, have been also associated to an inflammatory pheno- type. Recent data asserted that cell inflammation could be reversed vere cases of MKD. -
Hop Aroma and Hoppy Beer Flavor: Chemical Backgrounds and Analytical Tools—A Review
Journal of the American Society of Brewing Chemists The Science of Beer ISSN: 0361-0470 (Print) 1943-7854 (Online) Journal homepage: http://www.tandfonline.com/loi/ujbc20 Hop Aroma and Hoppy Beer Flavor: Chemical Backgrounds and Analytical Tools—A Review Nils Rettberg, Martin Biendl & Leif-Alexander Garbe To cite this article: Nils Rettberg, Martin Biendl & Leif-Alexander Garbe (2018) Hop Aroma and Hoppy Beer Flavor: Chemical Backgrounds and Analytical Tools—A Review , Journal of the American Society of Brewing Chemists, 76:1, 1-20 To link to this article: https://doi.org/10.1080/03610470.2017.1402574 Published online: 27 Feb 2018. Submit your article to this journal Article views: 1464 View Crossmark data Full Terms & Conditions of access and use can be found at http://www.tandfonline.com/action/journalInformation?journalCode=ujbc20 JOURNAL OF THE AMERICAN SOCIETY OF BREWING CHEMISTS 2018, VOL. 76, NO. 1, 1–20 https://doi.org/10.1080/03610470.2017.1402574 Hop Aroma and Hoppy Beer Flavor: Chemical Backgrounds and Analytical Tools— A Review Nils Rettberga, Martin Biendlb, and Leif-Alexander Garbec aVersuchs– und Lehranstalt fur€ Brauerei in Berlin (VLB) e.V., Research Institute for Beer and Beverage Analysis, Berlin, Deutschland/Germany; bHHV Hallertauer Hopfenveredelungsgesellschaft m.b.H., Mainburg, Germany; cHochschule Neubrandenburg, Fachbereich Agrarwirtschaft und Lebensmittelwissenschaften, Neubrandenburg, Germany ABSTRACT KEYWORDS Hops are the most complex and costly raw material used in brewing. Their chemical composition depends Aroma; analysis; beer flavor; on genetically controlled factors that essentially distinguish hop varieties and is influenced by environmental gas chromatography; hops factors and post-harvest processing. The volatile fingerprint of hopped beer relates to the quantity and quality of the hop dosage and timing of hop addition, as well as the overall brewing technology applied. -
Relationship to Atherosclerosis
AN ABSTRACT OF THE THESIS OF Marilyn L. Walsh for the degree of Doctor of Philosophy in Biochemistry and Biophysics presented on May 3..2001. Title: Protocols. Pathways. Peptides and Redacted for Privacy Wilbert Gamble The vascular system transports components essential to the survival of the individual and acts as a bamer to substances that may injure the organism. Atherosclerosis is a dynamic, lesion producing disease of the arterial system that compromises the functioning of the organ by occlusive and thrombogenic processes. This investigation was undertaken to elucidate some of the normal biochemical processes related to the development of atherosclerosis. A significant part of the investigation was directed toward developing and combining methods and protocols to obtain the data in a concerted manner. A postmitochondnal supernatant of bovine aorta, usingmevalonate-2-14C as the substrate, was employed in the investigation. Methods included paper, thin layer, and silica gel chromatography; gel filtration, high performance liquid chromatography (HPLC), and mass spectrometry. This current research demonstrated direct incorporation of mevalonate-2- 14Cinto the trans-methyiglutaconic shunt intermediates. The aorta also contains alcohol dehydrogenase activity, which converts dimethylallyl alcohol and isopentenol to dimethylacrylic acid, a constituent of the trans-methylgiutaconate Small, radioactive peptides, named Nketewa as a group, were biosynthesized using mevalonate-2-'4C as the substrate. They were shown to pass through a 1000 D membrane. Acid hydrolysis and dabsyl-HPLC analysis defined the composition of the Nketewa peptides. One such peptide, Nketewa 1, had a molecular weight of 1038 and a sequence of his-gly-val-cys-phe-ala-ser-met (HGVCFASM), with afarnesyl group linked via thioether linkage to the cysteine residue. -
Anaerobic Bacteria Need Their Vitamin B12 to Digest Estrogen COMMENTARY Montserrat El´Ias-Arnanza,1
COMMENTARY Anaerobic bacteria need their vitamin B12 to digest estrogen COMMENTARY Montserrat El´ıas-Arnanza,1 Often described as nature’s most beautiful cofactor (1), vitamin B12 (cobalamin) is a complex and fascinating organometallic molecule that, although made only by some prokaryotes, has key functional roles in microbes, animals, and humans (2). Its two major biological forms, methylcobalamin (MeCbl) and adenosylcobalamin (AdoCbl), have a central cobalt atom in a corrin ring that is coordinated via a cobalt–carbon bond to an upper axial methyl or 5′-deoxyadenosyl group, re- spectively; in both forms the lower axial ligand is the 5,6-dimethylbenzimidazole (DMB) base of a nu- cleotide tail attached to the corrin ring (2–5). Finely controlled enzymatic or photolytic cleavage of the upper axial cobalt–carbon bond underlies the use of B12 as an enzyme cofactor or, in a new twist, as the light-sensing molecule in a photoreceptor pro- tein (2–5). As an enzyme cofactor, MeCbl is used for methyl transfer reactions by methyltransferases and Fig. 1. Proposed B12-dependent methylation of estrogen to androgen in AdoCbl for radical-based transformations by mutases, anaerobic denitrifying bacteria. The putative catalytic and B12-binding units are EmtA and EmtB, respectively, which are encoded by the estrogen–up-regulated dehydratases, deaminases, and ribonucleotide reduc- emtABCD operon. As in well-characterized B -dependent methyltransferases, the – 12 tases (2 4). In a broad range of organisms and bio- cobalt in B12 is expected to cycle between the +3and+1oxidationstates.The logical processes, B12-dependent methyltransferases latter is a potent nucleophile that suffers occasional oxidative inactivation to the catalyze the transfer of a methyl group from a donor +2 state and requires reductive activation to reenter the catalytic cycle (dotted to a final acceptor, utilizing MeCbl or its methylcobamide arrows). -
Olefin Isomers of a Triazole Bisphosphonate Synergistically Inhibit Geranylgeranyl Diphosphate Synthase S
Supplemental material to this article can be found at: http://molpharm.aspetjournals.org/content/suppl/2017/01/05/mol.116.107326.DC1 1521-0111/91/3/229–236$25.00 http://dx.doi.org/10.1124/mol.116.107326 MOLECULAR PHARMACOLOGY Mol Pharmacol 91:229–236, March 2017 Copyright ª 2017 by The American Society for Pharmacology and Experimental Therapeutics Olefin Isomers of a Triazole Bisphosphonate Synergistically Inhibit Geranylgeranyl Diphosphate Synthase s Cheryl Allen, Sandhya Kortagere, Huaxiang Tong, Robert A. Matthiesen, Joseph I. Metzger, David F. Wiemer, and Sarah A. Holstein Department of Medicine, Roswell Park Cancer Institute, Buffalo, New York (C.A.); Department of Microbiology and Immunology, Drexel University College of Medicine, Philadelphia, Pennsylvania (S.K.); Penn State Cancer Institute, Hershey, Pennsylvania (H. T.); Department of Chemistry, University of Iowa, Iowa City, Iowa (R.A.M., J.I.M., D.F.W.); and Department of Internal Medicine, University of Nebraska Medical Center, Omaha, Nebraska (S.A.H.) Downloaded from Received November 3, 2016; accepted December 28, 2016 ABSTRACT The isoprenoid donor for protein geranylgeranylation reactions, in which cells were treated with varying concentrations of each geranylgeranyl diphosphate (GGDP), is the product of the isomer alone and in different combinations revealed that the enzyme GGDP synthase (GGDPS) that condenses farnesyl two isomers potentiate the induced-inhibition of protein ger- molpharm.aspetjournals.org diphosphate (FDP) and isopentenyl pyrophosphate. GGDPS anylgeranylation when used in a 3:1 HG:HN combination. A inhibition is of interest from a therapeutic perspective for synergistic interaction was observed between the two isomers multiple myeloma because we have shown that targeting Rab in the GGDPS enzyme assay. -
Friedelin Synthase from Maytenus Ilicifolia
www.nature.com/scientificreports OPEN Friedelin Synthase from Maytenus ilicifolia: Leucine 482 Plays an Essential Role in the Production of Received: 09 May 2016 Accepted: 20 October 2016 the Most Rearranged Pentacyclic Published: 22 November 2016 Triterpene Tatiana M. Souza-Moreira1, Thaís B. Alves1, Karina A. Pinheiro1, Lidiane G. Felippe1, Gustavo M. A. De Lima2, Tatiana F. Watanabe1, Cristina C. Barbosa3, Vânia A. F. F. M. Santos1, Norberto P. Lopes4, Sandro R. Valentini3, Rafael V. C. Guido2, Maysa Furlan1 & Cleslei F. Zanelli3 Among the biologically active triterpenes, friedelin has the most-rearranged structure produced by the oxidosqualene cyclases and is the only one containing a cetonic group. In this study, we cloned and functionally characterized friedelin synthase and one cycloartenol synthase from Maytenus ilicifolia (Celastraceae). The complete coding sequences of these 2 genes were cloned from leaf mRNA, and their functions were characterized by heterologous expression in yeast. The cycloartenol synthase sequence is very similar to other known OSCs of this type (approximately 80% identity), although the M. ilicifolia friedelin synthase amino acid sequence is more related to β-amyrin synthases (65–74% identity), which is similar to the friedelin synthase cloned from Kalanchoe daigremontiana. Multiple sequence alignments demonstrated the presence of a leucine residue two positions upstream of the friedelin synthase Asp-Cys-Thr-Ala-Glu (DCTAE) active site motif, while the vast majority of OSCs identified so far have a valine or isoleucine residue at the same position. The substitution of the leucine residue with valine, threonine or isoleucine in M. ilicifolia friedelin synthase interfered with substrate recognition and lead to the production of different pentacyclic triterpenes. -
Biocatalyzed Synthesis of Statins: a Sustainable Strategy for the Preparation of Valuable Drugs
catalysts Review Biocatalyzed Synthesis of Statins: A Sustainable Strategy for the Preparation of Valuable Drugs Pilar Hoyos 1, Vittorio Pace 2 and Andrés R. Alcántara 1,* 1 Department of Chemistry in Pharmaceutical Sciences, Faculty of Pharmacy, Complutense University of Madrid, Campus de Moncloa, E-28040 Madrid, Spain; [email protected] 2 Department of Pharmaceutical Chemistry, Faculty of Life Sciences, Althanstrasse 14, A-1090 Vienna, Austria; [email protected] * Correspondence: [email protected]; Tel.: +34-91-394-1823 Received: 25 February 2019; Accepted: 9 March 2019; Published: 14 March 2019 Abstract: Statins, inhibitors of 3-hydroxy-3-methylglutaryl coenzyme A (HMG-CoA) reductase, are the largest selling class of drugs prescribed for the pharmacological treatment of hypercholesterolemia and dyslipidaemia. Statins also possess other therapeutic effects, called pleiotropic, because the blockade of the conversion of HMG-CoA to (R)-mevalonate produces a concomitant inhibition of the biosynthesis of numerous isoprenoid metabolites (e.g., geranylgeranyl pyrophosphate (GGPP) or farnesyl pyrophosphate (FPP)). Thus, the prenylation of several cell signalling proteins (small GTPase family members: Ras, Rac, and Rho) is hampered, so that these molecular switches, controlling multiple pathways and cell functions (maintenance of cell shape, motility, factor secretion, differentiation, and proliferation) are regulated, leading to beneficial effects in cardiovascular health, regulation of the immune system, anti-inflammatory and immunosuppressive properties, prevention and treatment of sepsis, treatment of autoimmune diseases, osteoporosis, kidney and neurological disorders, or even in cancer therapy. Thus, there is a growing interest in developing more sustainable protocols for preparation of statins, and the introduction of biocatalyzed steps into the synthetic pathways is highly advantageous—synthetic routes are conducted under mild reaction conditions, at ambient temperature, and can use water as a reaction medium in many cases. -
Lipid Metabolism
LIPID METABOLISM OXIDATION OF LONG-CHAIN FATTY ACIDS Two Forms of Carrying Fatty Acids: PLASMA ALBUMIN: Can carry up to 10 molecules of fats in the blood serum. o Also carries varies drugs and pharmacological agents. The albumin capacity for carrying these drugs must be considered with polypharmacy. ACTIVATION OF FATTY ACIDS: Fats are delivered to cells as free fats. They must be activated before they can be burned. Acyl-CoA Synthetase: Free Fat ------> Acyl-CoA Thioester, which has a high-energy bond. o ATP is required in the synthesis. o This step is fully reversible, as ATP and the Acyl-CoA Thioester product both have equivalent energy levels. o To prevent the reversibility, the reaction is coupled to Pyrophosphatase, which catalyzes Pyrophosphate ------> 2 Inorganic Phosphate, which breaks a high energy bond to drive the reaction to the right. TRANSLOCATION OF FATTY ACYL-CoA THIOESTER: The Acyl-CoA must get into the mitochondrial matrix. Once activated, the Acyl-CoA can get through the out mitochondrial membrane by traversing through a Porin protein. Carnitine Intermediate: Only Long-chain fatty acids are converted to carnitine as an intermediate. Short-chain fats can traverse the inner membrane directly: o INTERMEMBRANE SPACE: Carnitine Acyl Transferase I: Acyl-CoA ------> Acyl Carnitine. Carnitine is a simpler structure than Coenzyme-A. The fat is esterified to carnitine, temporarily, for the purpose of transport. o Translocase: Only recognizes Acyl-Carnitine. It translocated the carnitine structure through the inner membrane to the matrix. o MITOCHONDRIAL MATRIX: Carnitine Acyl Transferase II: Acyl- Carnitine ------> Acyl-CoA o In the matrix the fat is esterified back to Coenzyme-A. -
Product Data Sheet
Inhibitors Product Data Sheet Ro 48-8071 fumarate • Agonists Cat. No.: HY-18630A CAS No.: 189197-69-1 Molecular Formula: C₂₇H₃₁BrFNO₆ • Molecular Weight: 564.44 Screening Libraries Target: Others Pathway: Others Storage: Powder -20°C 3 years 4°C 2 years In solvent -80°C 6 months -20°C 1 month SOLVENT & SOLUBILITY In Vitro H2O : 100 mg/mL (177.17 mM; Need ultrasonic) DMSO : ≥ 55 mg/mL (97.44 mM) * "≥" means soluble, but saturation unknown. Mass Solvent 1 mg 5 mg 10 mg Concentration Preparing 1 mM 1.7717 mL 8.8583 mL 17.7167 mL Stock Solutions 5 mM 0.3543 mL 1.7717 mL 3.5433 mL 10 mM 0.1772 mL 0.8858 mL 1.7717 mL Please refer to the solubility information to select the appropriate solvent. In Vivo 1. Add each solvent one by one: 10% DMSO >> 40% PEG300 >> 5% Tween-80 >> 45% saline Solubility: ≥ 2.5 mg/mL (4.43 mM); Clear solution 2. Add each solvent one by one: 10% DMSO >> 90% (20% SBE-β-CD in saline) Solubility: ≥ 2.5 mg/mL (4.43 mM); Clear solution 3. Add each solvent one by one: 10% DMSO >> 90% corn oil Solubility: ≥ 2.5 mg/mL (4.43 mM); Clear solution BIOLOGICAL ACTIVITY Description Ro 48-8071 fumarate is an inhibitor of OSC (Oxidosqualene cyclase) with IC50 of appr 6.5 nM. IC₅₀ & Target IC50: appr 6.5 nM (Oxidosqualene cyclase)[1] [1] In Vitro In HepG2 cells, Ro 48-8071 reduces cholesterol synthesis dose dependently with an IC50 value of appr 1.5 nM .