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BGBM Annual Report 2017–2019
NETWORKING FOR DIVERSITY Annual Report 2017 – 2019 2017 – BGBM BGBM Annual Report 2017 – 2019 Cover image: Research into global biodiversity and its significance for humanity is impossible without networks. The topic of networking can be understood in different ways: in the natural world, with the life processes within an organism – visible in the network of the veins of a leaf or in the genetic diversity in populations of plants – networking takes place by means of pollen, via pollinators or the wind. In the world of research, individual objects, such as a particular plant, are networked with the data obtained from them. Networking is also crucial if this data is to be effective as a knowledge base for solving global issues of the future: collaboration between scientific experts within and across disciplines and with stakeholders at regional, national and international level. Contents Foreword 5 Organisation 56 A network for plants 6 Facts and figures 57 Staff, visiting scientists, doctoral students 57 Key events of 2017 – 2019 10 Affiliated and unsalaried scientists, volunteers 58 BGBM publications 59 When diversity goes online 16 Species newly described by BGBM authors 78 Families and genera newly described by BGBM authors 82 On the quest for diversity 20 Online resources and databases 83 Externally funded projects 87 Invisible diversity 24 Hosted scientific events 2017 – 2019 92 Collections 93 Humboldt 2.0 30 Library 96 BGBM Press: publications 97 Between East and West 36 Botanical Museum 99 Press and public relations 101 At the service of science 40 Visitor numbers 102 Budget 103 A research museum 44 Publication information 104 Hands-on science 50 Our symbol, the corncockle 52 4 5 Foreword BGBM Annual Report 2017 – 2019 We are facing vital challenges. -
Foliicolous Lichens and Their Lichenicolous Fungi Collected During the Smithsonian International Cryptogamic Expedition to Guyana 1996
45 Tropical Bryology 15: 45-76, 1998 Foliicolous lichens and their lichenicolous fungi collected during the Smithsonian International Cryptogamic Expedition to Guyana 1996 Robert Lücking Lehrstuhl für Pflanzensystematik, Universität Bayreuth, D-95447 Bayreuth, Germany Abstract: A total of 233 foliicolous lichen species and 18 lichenicolous fungi are reported from Guyana as a result of the Smithsonian „International Cryptogamic Expedition to Guyana“ 1996. Three lichens and two lichenicolous fungi are new to science: Arthonia grubei sp.n., Badimia subelegans sp.n., Calopadia pauciseptata sp.n., Opegrapha matzeri sp.n. (lichenicolous on Amazonomyces sprucei), and Pyrenidium santessonii sp.n. (lichenicolous on Bacidia psychotriae). The new combination Strigula janeirensis (Bas.: Phylloporina janeirensis; syn.: Raciborskiella janeirensis) is proposed. Apart from Amazonomyces sprucei and Bacidia psychotriae, Arthonia lecythidicola (with the lichenicolous A. pseudopegraphina) and Byssolecania deplanata (with the lichenicolous Opegrapha cf. kalbii) are reported as new hosts for lichenicolous fungi. Arthonia pseudopegraphina growing on A. lecythidicola is the first known case of adelphoparasitism at generic level in foliicolous Arthonia. Arthonia flavoverrucosa, Badimia polillensis, and Byssoloma vezdanum are new records for the Neotropics, and 115 species are new for Guyana, resulting in a total of c. 280 genuine foliicolous species reported for that country, while Porina applanata and P. verruculosa are excluded from its flora. The foliicolous lichen flora of Guyana is representative for the Guianas (Guyana, Suriname, French Guiana) and has great affinities with the Amazon region, while the degree of endemism is low. A characteristic species for this area is Amazonomyces sprucei. Species composition is typical of Neotropical lowland to submontane humid forests, with a dominance of the genera Porina, Strigula, and Mazosia. -
1307 Fungi Representing 1139 Infrageneric Taxa, 317 Genera and 66 Families ⇑ Jolanta Miadlikowska A, , Frank Kauff B,1, Filip Högnabba C, Jeffrey C
Molecular Phylogenetics and Evolution 79 (2014) 132–168 Contents lists available at ScienceDirect Molecular Phylogenetics and Evolution journal homepage: www.elsevier.com/locate/ympev A multigene phylogenetic synthesis for the class Lecanoromycetes (Ascomycota): 1307 fungi representing 1139 infrageneric taxa, 317 genera and 66 families ⇑ Jolanta Miadlikowska a, , Frank Kauff b,1, Filip Högnabba c, Jeffrey C. Oliver d,2, Katalin Molnár a,3, Emily Fraker a,4, Ester Gaya a,5, Josef Hafellner e, Valérie Hofstetter a,6, Cécile Gueidan a,7, Mónica A.G. Otálora a,8, Brendan Hodkinson a,9, Martin Kukwa f, Robert Lücking g, Curtis Björk h, Harrie J.M. Sipman i, Ana Rosa Burgaz j, Arne Thell k, Alfredo Passo l, Leena Myllys c, Trevor Goward h, Samantha Fernández-Brime m, Geir Hestmark n, James Lendemer o, H. Thorsten Lumbsch g, Michaela Schmull p, Conrad L. Schoch q, Emmanuël Sérusiaux r, David R. Maddison s, A. Elizabeth Arnold t, François Lutzoni a,10, Soili Stenroos c,10 a Department of Biology, Duke University, Durham, NC 27708-0338, USA b FB Biologie, Molecular Phylogenetics, 13/276, TU Kaiserslautern, Postfach 3049, 67653 Kaiserslautern, Germany c Botanical Museum, Finnish Museum of Natural History, FI-00014 University of Helsinki, Finland d Department of Ecology and Evolutionary Biology, Yale University, 358 ESC, 21 Sachem Street, New Haven, CT 06511, USA e Institut für Botanik, Karl-Franzens-Universität, Holteigasse 6, A-8010 Graz, Austria f Department of Plant Taxonomy and Nature Conservation, University of Gdan´sk, ul. Wita Stwosza 59, 80-308 Gdan´sk, Poland g Science and Education, The Field Museum, 1400 S. -
An Evolving Phylogenetically Based Taxonomy of Lichens and Allied Fungi
Opuscula Philolichenum, 11: 4-10. 2012. *pdf available online 3January2012 via (http://sweetgum.nybg.org/philolichenum/) An evolving phylogenetically based taxonomy of lichens and allied fungi 1 BRENDAN P. HODKINSON ABSTRACT. – A taxonomic scheme for lichens and allied fungi that synthesizes scientific knowledge from a variety of sources is presented. The system put forth here is intended both (1) to provide a skeletal outline of the lichens and allied fungi that can be used as a provisional filing and databasing scheme by lichen herbarium/data managers and (2) to announce the online presence of an official taxonomy that will define the scope of the newly formed International Committee for the Nomenclature of Lichens and Allied Fungi (ICNLAF). The online version of the taxonomy presented here will continue to evolve along with our understanding of the organisms. Additionally, the subfamily Fissurinoideae Rivas Plata, Lücking and Lumbsch is elevated to the rank of family as Fissurinaceae. KEYWORDS. – higher-level taxonomy, lichen-forming fungi, lichenized fungi, phylogeny INTRODUCTION Traditionally, lichen herbaria have been arranged alphabetically, a scheme that stands in stark contrast to the phylogenetic scheme used by nearly all vascular plant herbaria. The justification typically given for this practice is that lichen taxonomy is too unstable to establish a reasonable system of classification. However, recent leaps forward in our understanding of the higher-level classification of fungi, driven primarily by the NSF-funded Assembling the Fungal Tree of Life (AFToL) project (Lutzoni et al. 2004), have caused the taxonomy of lichen-forming and allied fungi to increase significantly in stability. This is especially true within the class Lecanoromycetes, the main group of lichen-forming fungi (Miadlikowska et al. -
H. Thorsten Lumbsch VP, Science & Education the Field Museum 1400
H. Thorsten Lumbsch VP, Science & Education The Field Museum 1400 S. Lake Shore Drive Chicago, Illinois 60605 USA Tel: 1-312-665-7881 E-mail: [email protected] Research interests Evolution and Systematics of Fungi Biogeography and Diversification Rates of Fungi Species delimitation Diversity of lichen-forming fungi Professional Experience Since 2017 Vice President, Science & Education, The Field Museum, Chicago. USA 2014-2017 Director, Integrative Research Center, Science & Education, The Field Museum, Chicago, USA. Since 2014 Curator, Integrative Research Center, Science & Education, The Field Museum, Chicago, USA. 2013-2014 Associate Director, Integrative Research Center, Science & Education, The Field Museum, Chicago, USA. 2009-2013 Chair, Dept. of Botany, The Field Museum, Chicago, USA. Since 2011 MacArthur Associate Curator, Dept. of Botany, The Field Museum, Chicago, USA. 2006-2014 Associate Curator, Dept. of Botany, The Field Museum, Chicago, USA. 2005-2009 Head of Cryptogams, Dept. of Botany, The Field Museum, Chicago, USA. Since 2004 Member, Committee on Evolutionary Biology, University of Chicago. Courses: BIOS 430 Evolution (UIC), BIOS 23410 Complex Interactions: Coevolution, Parasites, Mutualists, and Cheaters (U of C) Reading group: Phylogenetic methods. 2003-2006 Assistant Curator, Dept. of Botany, The Field Museum, Chicago, USA. 1998-2003 Privatdozent (Assistant Professor), Botanical Institute, University – GHS - Essen. Lectures: General Botany, Evolution of lower plants, Photosynthesis, Courses: Cryptogams, Biology -
Lichens and Associated Fungi from Glacier Bay National Park, Alaska
The Lichenologist (2020), 52,61–181 doi:10.1017/S0024282920000079 Standard Paper Lichens and associated fungi from Glacier Bay National Park, Alaska Toby Spribille1,2,3 , Alan M. Fryday4 , Sergio Pérez-Ortega5 , Måns Svensson6, Tor Tønsberg7, Stefan Ekman6 , Håkon Holien8,9, Philipp Resl10 , Kevin Schneider11, Edith Stabentheiner2, Holger Thüs12,13 , Jan Vondrák14,15 and Lewis Sharman16 1Department of Biological Sciences, CW405, University of Alberta, Edmonton, Alberta T6G 2R3, Canada; 2Department of Plant Sciences, Institute of Biology, University of Graz, NAWI Graz, Holteigasse 6, 8010 Graz, Austria; 3Division of Biological Sciences, University of Montana, 32 Campus Drive, Missoula, Montana 59812, USA; 4Herbarium, Department of Plant Biology, Michigan State University, East Lansing, Michigan 48824, USA; 5Real Jardín Botánico (CSIC), Departamento de Micología, Calle Claudio Moyano 1, E-28014 Madrid, Spain; 6Museum of Evolution, Uppsala University, Norbyvägen 16, SE-75236 Uppsala, Sweden; 7Department of Natural History, University Museum of Bergen Allégt. 41, P.O. Box 7800, N-5020 Bergen, Norway; 8Faculty of Bioscience and Aquaculture, Nord University, Box 2501, NO-7729 Steinkjer, Norway; 9NTNU University Museum, Norwegian University of Science and Technology, NO-7491 Trondheim, Norway; 10Faculty of Biology, Department I, Systematic Botany and Mycology, University of Munich (LMU), Menzinger Straße 67, 80638 München, Germany; 11Institute of Biodiversity, Animal Health and Comparative Medicine, College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow G12 8QQ, UK; 12Botany Department, State Museum of Natural History Stuttgart, Rosenstein 1, 70191 Stuttgart, Germany; 13Natural History Museum, Cromwell Road, London SW7 5BD, UK; 14Institute of Botany of the Czech Academy of Sciences, Zámek 1, 252 43 Průhonice, Czech Republic; 15Department of Botany, Faculty of Science, University of South Bohemia, Branišovská 1760, CZ-370 05 České Budějovice, Czech Republic and 16Glacier Bay National Park & Preserve, P.O. -
New Species of Foliicolous Lichens from “La Amistad” Biosphere Reserve, Costa Rica
Willdenowia 33 – 2003 459 RAINER SCHUBERT, ROBERT LÜCKING & HELGE THORSTEN LUMBSCH New species of foliicolous lichens from “La Amistad” Biosphere Reserve, Costa Rica Abstract Schubert, R., Lücking, R. & Lumbsch, H. T.: New species of foliicolous lichens from “La Amistad” Biosphere Reserve, Costa Rica. – Willdenowia 33: 459-465. – ISSN 0511-9618; © 2003 BGBM Berlin-Dahlem. Four new foliicolous lichen species are described from the Biosphere Reserve “La Amistad” (Cor- dillera de Talamanca), Costa Rica: Byssoloma carneum with yellowish apothecia and crystalline exciple; Fellhanera tubulifera with tubular, campylidia-like pycnidia; Porina flavopapillata with subglobose, reddish perithecia provided with short, irregular, yellowish squamules and 15-septate ascospores; and Trichothelium chlorinum with minute, greenish perithecia provided with short, irregular setae and 3-septate ascospores. Based on new collections, Badimia tuckermanii is emended to cover an essentially neotropical taxon and excluding the paleotropical B. elixii. 1. Introduction The foliicolous lichen biotas of Costa Rica are rather well studied and shelter about 400 species, which corresponds to 50 % of the world’s biotas and 80 % of all species known from the Neotropics (Lücking 1995, 2003, Lücking & Kalb 2000). The discovery of new species in this rather small country seems not very likely; nevertheless, there are extensive areas that are diffi- cult to access and harbour pristine, unexplored vegetation. The largest of these is “La Amistad” International Park, adjacent to “Chirripó” National Park and south of the capital San José, cover- ing an area of c. 2000 km2 in the Cordillera de Talamanca and the western parts of Panama (Herrera 1992). Together with a number of other protected areas, it forms the “La Amistad” Bio- sphere Reserve (Herrera 1992). -
A Review of Lichenology in Saint Lucia Including a Lichen Checklist
A REVIEW OF LICHENOLOGY IN SAINT LUCIA INCLUDING A LICHEN CHECKLIST HOWARD F. FOX1 AND MARIA L. CULLEN2 Abstract. The lichenological history of Saint Lucia is reviewed from published literature and catalogues of herbarium specimens. 238 lichens and 2 lichenicolous fungi are reported. Of these 145 species are known only from single localities in Saint Lucia. Important her- barium collections were made by Alexander Evans, Henry and Frederick Imshaug, Dag Øvstedal, Emmanuël Sérusiaux and the authors. Soufrière is the most surveyed botanical district for lichens. Keywords. Lichenology, Caribbean islands, tropical forest lichens, history of botany, Saint Lucia Saint Lucia is located at 14˚N and 61˚W in the Lesser had related that there were 693 collections by Imshaug from Antillean archipelago, which stretches from Anguilla in the Saint Lucia and that these specimens were catalogued online north to Grenada and Barbados in the south. The Caribbean (Johnson et al. 2005). An excursion was made by the authors Sea lies to the west and the Atlantic Ocean is to the east. The in April and May 2007 to collect and study lichens in Saint island has a land area of 616 km² (238 square miles). Lucia. The unpublished Imshaug field notebook referring to This paper presents a comprehensive checklist of lichens in the Saint Lucia expedition of 1963 was transcribed on a visit Saint Lucia, using new records, unpublished data, herbarium to MSC in September 2007. Loans of herbarium specimens specimens, online resources and published records. When were obtained for study from BG, MICH and MSC. These our study began in March 2007, Feuerer (2005) indicated 2 voucher specimens collected by Evans, Imshaug, Øvstedal species from Saint Lucia and Imshaug (1957) had reported 3 and the authors were examined with a stereoscope and a species. -
TRICHOTHELIUM Pmmccarthy
TRICHOTHELIUM P.M.McCarthy [From Flora of Australia volume 58A (2001)] Trichothelium Müll.Arg., Bot. Jahrb. Syst. 6: 418 (1885), from the Greek trichos (a hair) and thelion, diminutive of thele (a teat or nipple), in reference to the setose perithecia which characterise the genus. Type: T. epiphyllum Müll.Arg. Thallus foliicolous, rarely corticolous or saxicolous (not in Australia). Algae Phycopeltis. Perithecia superficial on the thallus, not immersed in thallus-dominated verrucae. Involucrellum well-developed, usually contiguous with the exciple and extending to exciple base level, dark brown, green-black, purple-black or jet-black, rarely yellowish white (not in Australia) with one or more whorls of lax or stiff subapical setae composed of agglutinated hyphae; setae uniformly hyaline, whitish or black, or predominantly whitish but with a black base, or with a black basal half and a whitish apical half, or black apart from whitish tips. Ascospores 3–7-septate, or up to 21-septate or submuriform to muriform (not in Australia). Trichothelium s. str. comprises c. 29 predominantly or exclusively foliicolous taxa. Most are found only in tropical or subtropical rainforest, although a few occur in southern-temperate regions. Diversity is greatest in the Neotropics, but this at least partly reflects recent intensive field studies, especially in Costa Rica (Lücking, 1998). Comparatively few species are known in the eastern Palaeotropics. However, of the five species in Australia three are mainly Palaeotropical/Pacific, one is pantropical, and one is a Tasmanian endemic. Species of Trichothelium are easily overlooked in the field, and unlike those of Porina, colonies are often inconspicuous, being ±concolorous with the leaf surface. -
<I> Lecanoromycetes</I> of Lichenicolous Fungi Associated With
Persoonia 39, 2017: 91–117 ISSN (Online) 1878-9080 www.ingentaconnect.com/content/nhn/pimj RESEARCH ARTICLE https://doi.org/10.3767/persoonia.2017.39.05 Phylogenetic placement within Lecanoromycetes of lichenicolous fungi associated with Cladonia and some other genera R. Pino-Bodas1,2, M.P. Zhurbenko3, S. Stenroos1 Key words Abstract Though most of the lichenicolous fungi belong to the Ascomycetes, their phylogenetic placement based on molecular data is lacking for numerous species. In this study the phylogenetic placement of 19 species of cladoniicolous species lichenicolous fungi was determined using four loci (LSU rDNA, SSU rDNA, ITS rDNA and mtSSU). The phylogenetic Pilocarpaceae analyses revealed that the studied lichenicolous fungi are widespread across the phylogeny of Lecanoromycetes. Protothelenellaceae One species is placed in Acarosporales, Sarcogyne sphaerospora; five species in Dactylosporaceae, Dactylo Scutula cladoniicola spora ahtii, D. deminuta, D. glaucoides, D. parasitica and Dactylospora sp.; four species belong to Lecanorales, Stictidaceae Lichenosticta alcicorniaria, Epicladonia simplex, E. stenospora and Scutula epiblastematica. The genus Epicladonia Stictis cladoniae is polyphyletic and the type E. sandstedei belongs to Leotiomycetes. Phaeopyxis punctum and Bachmanniomyces uncialicola form a well supported clade in the Ostropomycetidae. Epigloea soleiformis is related to Arthrorhaphis and Anzina. Four species are placed in Ostropales, Corticifraga peltigerae, Cryptodiscus epicladonia, C. galaninae and C. cladoniicola -
Kenai National Wildlife Refuge Species List, Version 2018-07-24
Kenai National Wildlife Refuge Species List, version 2018-07-24 Kenai National Wildlife Refuge biology staff July 24, 2018 2 Cover image: map of 16,213 georeferenced occurrence records included in the checklist. Contents Contents 3 Introduction 5 Purpose............................................................ 5 About the list......................................................... 5 Acknowledgments....................................................... 5 Native species 7 Vertebrates .......................................................... 7 Invertebrates ......................................................... 55 Vascular Plants........................................................ 91 Bryophytes ..........................................................164 Other Plants .........................................................171 Chromista...........................................................171 Fungi .............................................................173 Protozoans ..........................................................186 Non-native species 187 Vertebrates ..........................................................187 Invertebrates .........................................................187 Vascular Plants........................................................190 Extirpated species 207 Vertebrates ..........................................................207 Vascular Plants........................................................207 Change log 211 References 213 Index 215 3 Introduction Purpose to avoid implying -
Godere (Ethiopia), Budongo (Uganda) and Kakamega (Kenya)
EFFECTS OF ANTHROPOGENIC DISTURBANCE ON THE DIVERSITY OF FOLIICOLOUS LICHENS IN TROPICAL RAINFORESTS OF EAST AFRICA: GODERE (ETHIOPIA), BUDONGO (UGANDA) AND KAKAMEGA (KENYA) Dissertation Zur Erlangung des akademischen Grades eines Doktors der Naturwissenschaft Fachbereich 3: Mathematik/Naturwissenschaften Universität Koblenz-Landau Vorgelegt am 23. Mai 2008 von Kumelachew Yeshitela geb. am 11. April 1965 in Äthiopien Referent: Prof. Dr. Eberhard Fischer Korreferent: Prof. Dr. Emanuël Sérusiaux In Memory of my late mother Bekelech Cheru i Table of Contents Abstract……………………………………………………………………………….......…...iii Chapter 1. GENERAL INTRODUCTION.................................................................................1 1.1 Tropical Rainforests .........................................................................................................1 1.2 Foliicolous lichens............................................................................................................5 1.3 Objectives .........................................................................................................................8 Chapter 2. GENERAL METHODOLOGY..............................................................................10 2.1 Foliicolous lichen sampling............................................................................................10 2.2 Foliicolous lichen identification.....................................................................................10 2.3 Data Analysis..................................................................................................................12