Microalgae N-3 Pufas Production and Use in Food and Feed Industries
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Sex Is a Ubiquitous, Ancient, and Inherent Attribute of Eukaryotic Life
PAPER Sex is a ubiquitous, ancient, and inherent attribute of COLLOQUIUM eukaryotic life Dave Speijera,1, Julius Lukešb,c, and Marek Eliášd,1 aDepartment of Medical Biochemistry, Academic Medical Center, University of Amsterdam, 1105 AZ, Amsterdam, The Netherlands; bInstitute of Parasitology, Biology Centre, Czech Academy of Sciences, and Faculty of Sciences, University of South Bohemia, 370 05 Ceské Budejovice, Czech Republic; cCanadian Institute for Advanced Research, Toronto, ON, Canada M5G 1Z8; and dDepartment of Biology and Ecology, University of Ostrava, 710 00 Ostrava, Czech Republic Edited by John C. Avise, University of California, Irvine, CA, and approved April 8, 2015 (received for review February 14, 2015) Sexual reproduction and clonality in eukaryotes are mostly Sex in Eukaryotic Microorganisms: More Voyeurs Needed seen as exclusive, the latter being rather exceptional. This view Whereas absence of sex is considered as something scandalous for might be biased by focusing almost exclusively on metazoans. a zoologist, scientists studying protists, which represent the ma- We analyze and discuss reproduction in the context of extant jority of extant eukaryotic diversity (2), are much more ready to eukaryotic diversity, paying special attention to protists. We accept that a particular eukaryotic group has not shown any evi- present results of phylogenetically extended searches for ho- dence of sexual processes. Although sex is very well documented mologs of two proteins functioning in cell and nuclear fusion, in many protist groups, and members of some taxa, such as ciliates respectively (HAP2 and GEX1), providing indirect evidence for (Alveolata), diatoms (Stramenopiles), or green algae (Chlor- these processes in several eukaryotic lineages where sex has oplastida), even serve as models to study various aspects of sex- – not been observed yet. -
A Review of Diatom Lipid Droplets
biology Review A Review of Diatom Lipid Droplets Ben Leyland, Sammy Boussiba and Inna Khozin-Goldberg * Microalgal Biotechnology Laboratory, The French Associates Institute for Agriculture and Biotechnology of Drylands, The J. Blaustein Institutes for Desert Research, Ben-Gurion University of the Negev, Sede Boqer Campus, Midreshet Ben-Gurion 8499000, Israel; [email protected] (B.L.); [email protected] (S.B.) * Correspondence: [email protected]; Tel.: +972-8656-3478 Received: 18 December 2019; Accepted: 14 February 2020; Published: 21 February 2020 Abstract: The dynamic nutrient availability and photon flux density of diatom habitats necessitate buffering capabilities in order to maintain metabolic homeostasis. This is accomplished by the biosynthesis and turnover of storage lipids, which are sequestered in lipid droplets (LDs). LDs are an organelle conserved among eukaryotes, composed of a neutral lipid core surrounded by a polar lipid monolayer. LDs shield the intracellular environment from the accumulation of hydrophobic compounds and function as a carbon and electron sink. These functions are implemented by interconnections with other intracellular systems, including photosynthesis and autophagy. Since diatom lipid production may be a promising objective for biotechnological exploitation, a deeper understanding of LDs may offer targets for metabolic engineering. In this review, we provide an overview of diatom LD biology and biotechnological potential. Keywords: diatoms; lipid droplets; triacylglycerols 1. Introduction LDs are an organelle composed of a core of neutral lipids, mostly triacylglycerol (TAG), surrounded by a polar lipid monolayer [1,2]. LDs can store reserves of energy, membrane components, carbon skeletons, carotenoids and proteins [3,4]. Many different synonyms have been used to describe this organelle throughout the literature and they can vary between organisms, such as lipid bodies, lipid particles, oil bodies, oil globules, cytoplasmic inclusions, oleosomes and adiposomes. -
Characterization and Phylogenetic Position of the Enigmatic Golden Alga Phaeothamnion Confervicola: Ultrastructure, Pigment Composition and Partial Ssu Rdna Sequence1
J. Phycol. 34, 286±298 (1998) CHARACTERIZATION AND PHYLOGENETIC POSITION OF THE ENIGMATIC GOLDEN ALGA PHAEOTHAMNION CONFERVICOLA: ULTRASTRUCTURE, PIGMENT COMPOSITION AND PARTIAL SSU RDNA SEQUENCE1 Robert A. Andersen,2 Dan Potter 3 Bigelow Laboratory for Ocean Sciences, West Boothbay Harbor, Maine 04575 Robert R. Bidigare, Mikel Latasa 4 Department of Oceanography, 1000 Pope Road, University of Hawaii at Manoa, Honolulu, Hawaii 96822 Kingsley Rowan School of Botany, University of Melbourne, Parkville, Victoria 3052, Australia and Charles J. O'Kelly Bigelow Laboratory for Ocean Sciences, West Boothbay Harbor, Maine 04575 ABSTRACT coxanthin, diadinoxanthin, diatoxanthin, heteroxanthin, The morphology, ultrastructure, photosynthetic pig- and b,b-carotene as well as chlorophylls a and c. The ments, and nuclear-encoded small subunit ribosomal DNA complete sequence of the SSU rDNA could not be obtained, (SSU rDNA) were examined for Phaeothamnion con- but a partial sequence (1201 bases) was determined. Par- fervicola Lagerheim strain SAG119.79. The morphology simony and neighbor-joining distance analyses of SSU rDNA from Phaeothamnion and 36 other chromophyte of the vegetative ®laments, as viewed under light micros- È copy, was indistinguishable from the isotype. Light micros- algae (with two Oomycete fungi as the outgroup) indicated copy, including epi¯uorescence microscopy, also revealed that Phaeothamnion was a weakly supported (bootstrap the presence of one to three chloroplasts in both vegetative 5,50%, 52%) sister taxon to the Xanthophyceae rep- cells and zoospores. Vegetative ®laments occasionally trans- resentatives and that this combined clade was in turn a formed to a palmelloid stage in old cultures. An eyespot weakly supported (bootstrap 5,50%, 67%) sister to the was not visible in zoospores when examined with light mi- Phaeophyceae. -
Light Harvesting Complexes and Chromatic Adaptation of Eustigmatophyte Alga Trachydiscus Minutus Master Thesis
University of South Bohemia Faculty of Science Light harvesting complexes and chromatic adaptation of Eustigmatophyte alga Trachydiscus minutus Master thesis Bc. Marek Pazderník Instructor: RNDr. Radek Litvín, Ph.D. České Budějovice 2015 Pazderník, M., 2015: Light harvesting complexes and chromatic adaptation of Eustigmatophyte alga Trachydiscus minutus. Mgr. Thesis, in English. – 53 p., Faculty of Science, University of South Bohemia, České Budějovice, Czech Republic. Annotation: The chromatic adaptation of Trachydiscus minutus was investigated by separation of light harvesting complexes (antennae and photosystems) on a sucrose gradient using variety of detergents and their concentrations, further complex purification and characterization was done using biochemical separation and spectroscopic techniques. Prohlašuji, že svoji diplomovou práci jsem vypracoval samostatně pouze s použitím pramenů a literatury uvedených v seznamu citované literatury. Prohlašuji, že v souladu s § 47b zákona č. 111/1998 Sb. v platném znění souhlasím se zveřejněním své diplomové práce, a to v nezkrácené podobě elektronickou cestou ve veřejně přístupné části databáze STAG provozované Jihočeskou univerzitou v Českých Budějovicích na jejích internetových stránkách, a to se zachováním mého autorského práva k odevzdanému textu této kvalifikační práce. Souhlasím dále s tím, aby toutéž elektronickou cestou byly v souladu s uvedeným ustanovením zákona č. 111/1998 Sb. zveřejněny posudky školitele a oponentů práce i záznam o průběhu a výsledku obhajoby kvalifikační práce. -
Furan Fatty Acid As an Anti-Inflammatory Component From
Furan fatty acid as an anti-inflammatory component from the green-lipped mussel Perna canaliculus Toshiyuki Wakimotoa,1, Hikaru Kondob, Hirohiko Niia, Kaori Kimurab, Yoko Egamia, Yusuke Okab, Masae Yoshidab, Eri Kidab, Yiping Yeb, Saeko Akahoshib, Tomohiro Asakawab, Koichi Matsumurac, Hitoshi Ishidab, Haruo Nukayab, Kuniro Tsujib, Toshiyuki Kanb, and Ikuro Abea,1 aGraduate School of Pharmaceutical Sciences, University of Tokyo, Tokyo 113-0033, Japan; bSchool of Pharmaceutical Sciences, University of Shizuoka, Shizuoka 422-8526, Japan; and cGraduate School of Agricultural and Life Sciences, University of Tokyo, Tokyo 113-8657, Japan Edited by Jerrold Meinwald, Cornell University, Ithaca, NY, and approved September 13, 2011 (received for review June 30, 2011) A lipid extract of Perna canaliculus (New Zealand green-lipped mus- activity of degrading enzymes. The preparation process was sub- sel) has reportedly displayed anti-inflammatory effects in animal sequently improved, and a lipid-rich fraction (Lyprinol), a super- fl models and in human controlled studies. However, the anti-in am- critical fluid [CO2] extraction of the freeze-dried stabilized green- matory lipid components have not been investigated in detail due lipped mussel powder, was prepared. This extraction method to the instability of the lipid extract, which has made the identifi- avoids warming the biological material, and therefore prevents cation of the distinct active components a formidable task. Consid- activation of enzymes. The lipid-rich extract was found to contain ering the instability of the active component, we carefully fraction- five main lipid classes including sterol esters, triglycerides, free ated a lipid extract of Perna canaliculus (Lyprinol) and detected fatty acids, sterols, and polar lipids. -
Docosahexaenoic Acid Esters of Hydroxy Fatty Acid Is a Novel Activator of NRF2
International Journal of Molecular Sciences Article Docosahexaenoic Acid Esters of Hydroxy Fatty Acid Is a Novel Activator of NRF2 Siddabasave Gowda B. Gowda 1 , Takayuki Tsukui 2, Hirotoshi Fuda 1, Yusuke Minami 1, Divyavani Gowda 1, Hitoshi Chiba 2 and Shu-Ping Hui 1,* 1 Faculty of Health Sciences, Hokkaido University, Kita 12, Nishi 5, Kita-ku, Sapporo 060-0812, Japan; [email protected] (S.G.B.G.); [email protected] (H.F.); [email protected] (Y.M.); [email protected] (D.G.) 2 Department of Nutrition, Sapporo University of Health Sciences, Nakanuma Nishi-4-3-1-15, Higashi-ku, Sapporo 007-0894, Japan; [email protected] (T.T.); [email protected] (H.C.) * Correspondence: [email protected]; Tel.: +8111-706-3693 Abstract: Fatty acid esters of hydroxy fatty acids (FAHFAs) are a new class of endogenous lipids with interesting physiological functions in mammals. Despite their structural diversity and links with nuclear factor erythroid 2-related factor 2 (NRF2) biosynthesis, FAHFAs are less explored as NRF2 activators. Herein, we examined for the first time the synthetic docosahexaenoic acid esters of 12- hydroxy stearic acid (12-DHAHSA) or oleic acid (12-DHAHOA) against NRF2 activation in cultured human hepatoma-derived cells (C3A). The effect of DHA-derived FAHFAs on lipid metabolism was explored by the nontargeted lipidomic analysis using liquid chromatography-mass spectrometry. Furthermore, their action on lipid droplet (LD) oxidation was investigated by the fluorescence imaging technique. The DHA-derived FAHFAs showed less cytotoxicity compared to their native fatty acids and activated the NRF2 in a dose-dependent pattern. -
Ultrastructural Studies of Microalgae
Ultrastructural Studies of Microalgae Alanoud Jaber Rawdhan A thesis submitted for the degree of Doctor of Philosophy (Integrated) October, 2015 School of Agriculture, Food and Rural Development, Newcastle University Newcastle upon Tyne, UK Abstract Ultrastructural Studies of Microalgae The optimization of fixation protocols was undertaken for Dunaliella salina, Nannochloropsis oculata and Pseudostaurosira trainorii to investigate two different aspects of microalgal biology. The first was to evaluate the effects of the infochemical 2, 4- decadienal as a potential lipid inducer in two promising lipid-producing species, Dunaliella salina and Nannochloropsis oculata, for biofuel production. D. salina fixed well using 1% glutaraldehyde in 0.5 M cacodylate buffer prepared in F/2 medium followed by secondary fixation with 1% osmium tetroxide. N. oculata fixed better with combined osmium- glutaraldehyde prepared in sea water and sucrose. A stereological measuring technique was used to compare lipid volume fractions in D. salina cells treated with 0, 2.5, and 50 µM and N. oculata treated with 0, 1, 10, and 50 µM with the lipid volume fraction of naturally senescent (stationary) cultures. There were significant increases in the volume fractions of lipid bodies in both D. salina (0.72%) and N. oculata (3.4%) decadienal-treated cells. However, the volume fractions of lipid bodies of the stationary phase cells were 7.1% for D. salina and 28% for N. oculata. Therefore, decadienal would not be a suitable lipid inducer for a cost-effective biofuel plant. Moreover, cells treated with the highest concentration of decadienal showed signs of programmed cell death. This would affect biomass accumulation in the biofuel plant, thus further reducing cost effectiveness. -
Blankenship Publications Sept 2020
Robert E. Blankenship Formerly at: Departments of Biology and Chemistry Washington University in St. Louis St. Louis, Missouri 63130 USA Current Address: 3536 S. Kachina Dr. Tempe, Arizona 85282 USA Tel (480) 518-2871 Email: [email protected] Google Scholar: https://scholar.google.com/citations?user=nXJkAnAAAAAJ&hl=en&oi=ao ORCID ID: 0000-0003-0879-9489 CITATION STATISTICS Google Scholar (September 2020) All Since 2015 Citations: 33,007 13,091 h-index: 81 43 i10-index: 319 177 Web of Science (September 2020) Sum of the Times Cited: 20,070 Sum of Times Cited without self-citations: 18,379 Citing Articles: 12,322 Citing Articles without self-citations: 11,999 Average Citations per Item: 43.82 h-index: 66 PUBLICATIONS: (441 total) B = Book; BR = Book Review; CP = Conference Proceedings; IR = Invited Review; R = Refereed; MM = Multimedia rd 441. Blankenship, RE (2021) Molecular Mechanisms of Photosynthesis, 3 Ed., Wiley,Chichester. Manuscript in Preparation. (B) 440. Kiang N, Parenteau, MN, Swingley W, Wolf BM, Brodderick J, Blankenship RE, Repeta D, Detweiler A, Bebout LE, Schladweiler J, Hearne C, Kelly ET, Miller KA, Lindemann R (2020) Isolation and characterization of a chlorophyll d-containing cyanobacterium from the site of the 1943 discovery of chlorophyll d. Manuscript in Preparation. 439. King JD, Kottapalli JS, and Blankenship RE (2020) A binary chimeragenesis approachreveals long-range tuning of copper proteins. Submitted. (R) 438. Wolf BM, Barnhart-Dailey MC, Timlin JA, and Blankenship RE (2020) Photoacclimation in a newly isolated Eustigmatophyte alga capable of growth using far-red light. Submitted. (R) 437. Chen M and Blankenship RE (2021) Photosynthesis. -
Uncommon Fatty Acids and Cardiometabolic Health
Review Uncommon Fatty Acids and Cardiometabolic Health Kelei Li 1, Andrew J. Sinclair 2,3, Feng Zhao 1 and Duo Li 1,3,* 1 Institute of Nutrition and Health, Qingdao University, Qingdao 266021, China; [email protected] (K.L.); [email protected] (F.Z.) 2 Faculty of Health, Deakin University, Locked Bag 20000, Geelong, VIC 3220, Australia; [email protected] 3 Department of Nutrition, Dietetics and Food, Monash University, Notting Hill, VIC 3168, Australia * Correspondence: [email protected]; Tel.: +86-532-8299-1018 Received: 7 September 2018; Accepted: 18 October 2018; Published: 20 October 2018 Abstract: Cardiovascular disease (CVD) is a major cause of mortality. The effects of several unsaturated fatty acids on cardiometabolic health, such as eicosapentaenoic acid (EPA) docosahexaenoic acid (DHA), α linolenic acid (ALA), linoleic acid (LA), and oleic acid (OA) have received much attention in past years. In addition, results from recent studies revealed that several other uncommon fatty acids (fatty acids present at a low content or else not contained in usual foods), such as furan fatty acids, n-3 docosapentaenoic acid (DPA), and conjugated fatty acids, also have favorable effects on cardiometabolic health. In the present report, we searched the literature in PubMed, Embase, and the Cochrane Library to review the research progress on anti-CVD effect of these uncommon fatty acids. DPA has a favorable effect on cardiometabolic health in a different way to other long-chain n-3 polyunsaturated fatty acids (LC n-3 PUFAs), such as EPA and DHA. Furan fatty acids and conjugated linolenic acid (CLNA) may be potential bioactive fatty acids beneficial for cardiometabolic health, but evidence from intervention studies in humans is still limited, and well-designed clinical trials are required. -
A Biosynthetically Inspired Synthetic Route to Substituted Furans, and Its Application to the Total Synthesis of the Furan Fatty
A Biosynthetically Inspired Synthetic Route to Substituted Furans, and its Application to the Total Synthesis of the Furan Fatty Acid F5 A thesis submitted in partial fulfilment of the requirements of the degree Doctor of Philosophy Robert Jack Lee Supervisors: Dr Gareth J. Pritchard and Dr Marc C. Kimber 1 Thesis Abstract Dietary fish oil supplementation has long been shown to have significant health benefits, largely stemming from the anti-inflammatory activity of the ω-3 and ω-6 polyunsaturated fatty acids (PUFAs) present in fish oils. The anti-inflammatory properties of these fatty acids has been linked to beneficial health effects, such as protecting the heart, in individuals consuming diets rich in fish, or supplemented with fish oils.1 These effects are highly notable in the Māori people native to coastal regions of New Zealand; the significantly lower rates of heart problems compared to the inland populous has been attributed to the consumption of the green lipped mussel Perna Canaliculus. Commercially available health supplements based on the New Zealand green lipped mussel include a freeze-dried powder and a lipid extract (Lyprinol®), the latter of which has shown anti- inflammatory properties comparable to classical non-steroidal anti-inflammatory drugs (NSAIDs) such as Naproxen.2 GCMS analysis of Lyprinol by Murphy et al. showed the presence of a class of ω-4 and ω-6 PUFAs bearing a highly electron rich tri- or tetra-alkyl furan ring, which were designated furan fatty acids (F-acids).3 Due to their instability, isolation of F- acids from natural sources cannot be carried out and a general synthetic route toward this class of natural products was required. -
Monodopsis and Vischeria Genomes Elucidate the Biology of Eustigmatophyte Algae
bioRxiv preprint doi: https://doi.org/10.1101/2021.08.22.457280; this version posted August 23, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. 1 Monodopsis and Vischeria genomes elucidate the biology of eustigmatophyte algae 2 3 Hsiao-Pei Yang1, Marius Wenzel2, Duncan A. Hauser1, Jessica M. Nelson1, Xia Xu1, Marek Eliáš3, 4 Fay-Wei Li1,4* 5 1Boyce Thompson Institute, Ithaca, New York 14853, USA 6 2School of Biological Sciences, University of Aberdeen, Aberdeen AB24 2TZ, United Kingdom 7 3Department of Biology and Ecology, University of Ostrava, Ostrava 71000, Czech Republic 8 4Plant Biology Section, Cornell University, Ithaca, New York 14853, USA 9 *Author of correspondence: [email protected] 10 11 Abstract 12 Members of eustigmatophyte algae, especially Nannochloropsis, have been tapped for biofuel 13 production owing to their exceptionally high lipid content. While extensive genomic, transcriptomic, and 14 synthetic biology toolkits have been made available for Nannochloropsis, very little is known about 15 other eustigmatophytes. Here we present three near-chromosomal and gapless genome assemblies of 16 Monodopsis (60 Mb) and Vischeria (106 Mb), which are the sister groups to Nannochloropsis. These 17 genomes contain unusually high percentages of simple repeats, ranging from 12% to 21% of the total 18 assembly size. Unlike Nannochloropsis, LINE repeats are abundant in Monodopsis and Vischeria and 19 might constitute the centromeric regions. We found that both mevalonate and non-mevalonate 20 pathways for terpenoid biosynthesis are present in Monodopsis and Vischeria, which is different from 21 Nannochloropsis that has only the latter. -
Influence of Nitrogen and Phosphorus on Microalgal Growth, Biomass
cells Review Influence of Nitrogen and Phosphorus on Microalgal Growth, Biomass, Lipid, and Fatty Acid Production: An Overview Maizatul Azrina Yaakob 1, Radin Maya Saphira Radin Mohamed 2,*, Adel Al-Gheethi 2 , Ravishankar Aswathnarayana Gokare 3 and Ranga Rao Ambati 4,* 1 Institute for Integrated Engineering, Universiti Tun Hussein Onn Malaysia, Parit Raja, Batu Pahat 86400, Johor, Malaysia; [email protected] 2 Micropollutant Research Centre (MPRC), Faculty of Civil Engineering and Built Environment, Universiti Tun Hussein Onn Malaysia, Parit Raja, Batu Pahat 86400, Johor, Malaysia; [email protected] 3 C. D. Sagar Centre for Life Sciences, Dayananda Sagar College of Engineering, Dayananda Sagar Institutions, Kumaraswamy Layout, Bangalore 560078, Karnataka, India; [email protected] 4 Department of Biotechnology, Vignan’s Foundation of Science, Technology and Research (Deemed to be University), Vadlamudi 522213, Guntur, Andhra Pradesh, India * Correspondence: [email protected] (R.R.A); [email protected] (R.M.S.R.M) Abstract: Microalgae can be used as a source of alternative food, animal feed, biofuel, fertilizer, cosmetics, nutraceuticals and for pharmaceutical purposes. The extraction of organic constituents from microalgae cultivated in the different nutrient compositions is influenced by microalgal growth rates, biomass yield and nutritional content in terms of lipid and fatty acid production. In this context, nutrient composition plays an important role in microalgae cultivation, and depletion and excessive sources of this nutrient might affect the quality of biomass. Investigation on the role of nitrogen and phosphorus, which are crucial for the growth of algae, has been addressed. However, there are Citation: Yaakob, M.A.; Mohamed, R.M.S.R.; Al-Gheethi, A.; challenges for enhancing nutrient utilization efficiently for large scale microalgae cultivation.