Characterization and Phylogenetic Position of the Enigmatic Golden Alga Phaeothamnion Confervicola: Ultrastructure, Pigment Composition and Partial Ssu Rdna Sequence1

Total Page:16

File Type:pdf, Size:1020Kb

Characterization and Phylogenetic Position of the Enigmatic Golden Alga Phaeothamnion Confervicola: Ultrastructure, Pigment Composition and Partial Ssu Rdna Sequence1 J. Phycol. 34, 286±298 (1998) CHARACTERIZATION AND PHYLOGENETIC POSITION OF THE ENIGMATIC GOLDEN ALGA PHAEOTHAMNION CONFERVICOLA: ULTRASTRUCTURE, PIGMENT COMPOSITION AND PARTIAL SSU RDNA SEQUENCE1 Robert A. Andersen,2 Dan Potter 3 Bigelow Laboratory for Ocean Sciences, West Boothbay Harbor, Maine 04575 Robert R. Bidigare, Mikel Latasa 4 Department of Oceanography, 1000 Pope Road, University of Hawaii at Manoa, Honolulu, Hawaii 96822 Kingsley Rowan School of Botany, University of Melbourne, Parkville, Victoria 3052, Australia and Charles J. O'Kelly Bigelow Laboratory for Ocean Sciences, West Boothbay Harbor, Maine 04575 ABSTRACT coxanthin, diadinoxanthin, diatoxanthin, heteroxanthin, The morphology, ultrastructure, photosynthetic pig- and b,b-carotene as well as chlorophylls a and c. The ments, and nuclear-encoded small subunit ribosomal DNA complete sequence of the SSU rDNA could not be obtained, (SSU rDNA) were examined for Phaeothamnion con- but a partial sequence (1201 bases) was determined. Par- fervicola Lagerheim strain SAG119.79. The morphology simony and neighbor-joining distance analyses of SSU rDNA from Phaeothamnion and 36 other chromophyte of the vegetative ®laments, as viewed under light micros- È copy, was indistinguishable from the isotype. Light micros- algae (with two Oomycete fungi as the outgroup) indicated copy, including epi¯uorescence microscopy, also revealed that Phaeothamnion was a weakly supported (bootstrap the presence of one to three chloroplasts in both vegetative 5,50%, 52%) sister taxon to the Xanthophyceae rep- cells and zoospores. Vegetative ®laments occasionally trans- resentatives and that this combined clade was in turn a formed to a palmelloid stage in old cultures. An eyespot weakly supported (bootstrap 5,50%, 67%) sister to the was not visible in zoospores when examined with light mi- Phaeophyceae. Based upon ultrastructural observations, croscopy, but small droplets, similar to eyespot droplets, pigment analysis, and SSU rDNA phylogenetic analysis, were apparent beneath the shorter ¯agellum when cells were Phaeothamnion is not a member of the Chrysophyceae viewed with electron microscopy. Zoospores had two ¯agella and should be classi®ed as incertae sedis with af®nities that were laterally inserted in the cell approximately one- to the Xanthophyceae and Phaeophyceae. third of the cell length from the apex. The longer ¯agellum Key index words: 18S rRNA; algae; carotenoids; chloro- was directed anteriorly and the shorter ¯agellum was di- phylls; Chrysophyceae; ¯agellar apparatus; heteroxanthin; rected posteriorly. Electron microscopy revealed the presence microtubular roots; Phaeophyceae; Phaeothamnion; phy- of tubular tripartite ¯agellar hairs on the longer ¯agellum, logeny; Xanthophyceae but no lateral ®laments were found on the tripartite hairs. The general organization of the ¯agellar root system was Abbreviations: bp, boiling point; HPLC, high-perfor- similar to that of zoospores belonging to the Xanthophyceae mance liquid chromatography; SSU rDNA, nuclear-encod- and Phaeophyceae. However, the transitional region of the ed small subunit ribosomal DNA ¯agella contained a transitional helix with four to six gyres. Microtubular root R1 consisted of six microtubules Phaeothamnion is a genus of freshwater ®lamen- at its proximal end and one microtubule at its distal end. tous algae currently classi®ed in the Chrysophyceae Roots R2 and R4 consisted of one microtubule each and (e.g. Bourrelly 1957, Preisig 1995). However, in the root R3 consisted of two microtubules. No rhizoplast was past, Phaeothamnion has been placed in the Phaeo- found. Thin-layer chromatography revealed the presence of phyceae (West 1904) and the Cryptophyceae (Pasch- fucoxanthin, diadinoxanthin, neoxanthin, and hetero- er 1914). Phaeothamnion confervicola Lagerheim is the xanthin as well as chlorophylls a, c1 and c2. High-perfor- type species (Lagerheim 1884, as P. confervicolum), mance liquid chromatography revealed the presence of fu- and it is typi®ed by specimens distributed as no. 608 in the Algae Aquae Dulcis Exsiccatae (Wittrock and 1 Received 26 September 1997. Accepted 31 December 1997. Nordstedt, fasc. 13). There are two described varie- 2 Author for reprint requests; e-mail [email protected]. ties, the nominate variety and P. confervicola var. brit- 3 Present address: Department of Pomology, University of Cal- ifornia, Davis, California 95616. tanica Godward. Phaeothamnion, in turn, is the type 4 Present address: Institut de CieÁncies del Mar, Passeig Joan de genus for the family Phaeothamniaceae and order Borbo s/n, 08039, Barcelona, Spain. Phaeothamniales (Bourrelly 1957) or suborder 286 PHAEOTHAMNION CONFERVICOLA 287 Phaeothamnineae (Bourrelly 1981, Starmach 1985). MATERIALS AND METHODS Four additional species have been described: P. ar- Phaeothamnion sp. strain SAG119.79 was obtained from the Sam- ticulatum Ettl, P. borzianum Pascher, P. dichrysis Vil- mlung von Algenkulturen at the University of GoÈttingen, Ger- laret, and P. polychrysis (Geitler) Pascher. These spe- many (SchloÈsser 1994). Cells were grown in DYIII (Lehman 1976) cies are separated on the basis of chloroplast num- or DYIV (Andersen et al. 1997) culture media at 12±258 C under ca. 100 mmol´m22´s21 visible light irradiance and either a 14:10 h ber, presence or absence of an eyespot in the zoo- or a 12:12 h LD photocycle. The vegetative features of this strain spore, cell size, basal cell morphology, cell wall were compared with isotype material of P. confervicola obtained thickness, branching patterns of the thalli, and oth- from the Farlow Herbarium of Harvard University (no. 608 in the er morphological features. The type description for Algae Aquae Dulcis Exsiccatae, Wittrock and Nordstedt, fasc. 13). Free-swimming zoospores were obtained by placing ®laments P. confervicola indicates that it has one chloroplast from an old culture (at least 30 days old) into fresh culture me- (Lagerheim 1884), whereas others report more than dium. During the light cycle on the second and third day follow- one chloroplast in at least some cells (Godward ing the culture medium change, zoospore release occurred from 1933, Geitler and Schiman-Czeika 1970). Also, an most ®laments. For electron microscopy, whole mount prepara- erroneous cell measurement has made its way into tions were prepared by collecting zoospores with centrifugation and drying cells directly on grids coated with pioloform (Ted the literature; Starmach (1985) gives the cell length Pella Inc., Redding, California). Cells were negatively stained with for P. confervicola as 20±30 mm even though Lager- a saturated aqueous solution of uranyl acetate. Zoospores pre- heim (1884) clearly reports the cell length to be no pared for electron microscopic thin sectioning were ®xed for 30± more than 12 mm. 60 min at room temperature (ca. 208 C) in a cocktail consisting Several additional golden-colored algae with ®la- of 1 mL 5% glutaraldehyde in 0.2 M sodium cacodylate buffer, pH 7, 0.5 mL 4% aqueous osmium tetroxide, and 8.5 mL zoo- mentous or sarcinoid habits have, at one time or spores in DYIII medium. The cells were harvested by gentle ®l- another, been assigned to the Phaeothamniales. tration onto cellulose acetate ®lters (3.0-mm pore size), enrobed Many of these algae, especially those placed in the in 3.0% aqueous ultralow-temperature gelling agarose, dehydrat- Sarcinochrysidales by Gayral and Billard (1986), are ed in an acetone series at 48 C, and embedded in Polybed-Araldite resin (Ted Pella Inc.). no longer assignable to the Chrysophyceae (O'Kelly For pigment analysis by thin layer chromatography (TLC), cells 1989a, Preisig 1995, Saunders et al. 1997). Preisig were concentrated by centrifugation, and pigments were extract- (1995) refers only the genera Chrysoclonium, Phae- ed from cell pellets using a Turrax macerator (Thomas Scienti®c, othamnion, Sphaeridiothrix, and Tetrachrysis to the Swedesboro, New Jersey) and various combinations of acetone, Phaeothamniaceae and places this family in the methanol, acetone:methanol (1:1), and DMSO. The extract was mixed with one-half volume of diethyl ether followed by an excess Chromulinales. Sphaeridiothrix has been considered of 10% aquaeous NaCl (w/v) to concentrate the pigments in the a palmelloid stage of Phaeothamnion by Geitler and epiphase. The epiphase volume was reduced with a stream of Schiman-Czeika (1970), but others have considered nitrogen (N2) gas. The concentrated extract was stored in dark- it to be separate (e.g. Pascher and Vlk 1943, Bour- ness at 2158 C over anhydrous NaCl to remove water. Six TLC relly 1963, Andrews 1970, Dop and Vroman 1976, systems were used. System 1 was a silica gel G/borax plate (Keast and Grant 1976) and a solvent solution of petroleum ether (608± Santos 1976, Cambra 1989). To further complicate 808 C bp):ethyl acetate:diethylamine (58:30:12) (Riley and Wilson matters, the xanthophyte genus Heterodendron, with 1965). System 2 was a silica gel G/borax plate and a solvent so- two species, may also be referable to Phaeothamnion lution of 20% acetone in n-hexane (Chapman 1965). System 3 (Ettl 1959). Species of Heterodendron are otherwise was a silica gel G/borax plate and a solvent solution of 40% ac- nearly indistinguishable from Phaeothamnion except etone in n-hexane (Chapman 1965). System 4 was a silica gel G/borax plate and a solvent solution of 30% acetone in petro- for their yellow-green plastids, and they have been leum ether (608±808 C bp) (Yokahama 1983). System 5 was a assigned to the Xanthophyceae
Recommended publications
  • APPENDIX C-3 Periphyton Taxonomical and Density Data, 2010
    KITSAULT MINE PROJECT ENVIRONMENTAL ASSESSMENT APPENDICES APPENDIX C-3 Periphyton Taxonomical and Density Data, 2010 VE51988 – Appendices Table C-3-1: Periphyton Taxonomic Composition And Density (#cells/ml) Data In Lakes, Kitsault Mine Project, 2010 FES Sample # 100534 100535 100536 100537 100538 100539 100540 100541 100542 100543 100544 100545 100546 100547 100548 Date 31-Aug- 31-Aug- 31-Aug- 31-Aug- 31-Aug- Units: # cells/ml 5-Sep-10 5-Sep-10 5-Sep-10 5-Sep-10 5-Sep-10 4-Sep-10 4-Sep-10 4-Sep-10 4-Sep-10 4-Sep-10 10 10 10 10 10 Area Sampled (cm2) 19.635 19.635 19.635 19.635 19.635 19.635 19.635 19.635 19.635 19.635 19.635 19.635 19.635 19.635 19.635 Location LC3-10 LC3-10 LC3-10 LC3-10 LC3-10 PC PC PC PC PC L901-O L901-O L901-O L901-O L901-O Taxonomy Order Sample 1 2 3 4 5 1 2 3 4 5 1 2 3 4 5 Phylum Genera and Species Chrysophyta Centrales Melosira sp. <45.5 Bacillariophycae Pennales Achnanthes flexella (diatoms) Achnanthes lanceolata <18.4 <15.9 <20.2 Achnanthes minutissima 4,147.0 4,442.4 1,237.6 5,014.4 <25.8 8,590.0 6,516.8 1,221.6 1,684.0 23,059.8 48.7 Achnanthes spp. 858.0 370.2 309.4 470.1 111.6 407.3 39.4 <21.7 332.9 97.4 Amphipleura pellucida Anomoeoneis spp.
    [Show full text]
  • WO 2016/096923 Al 23 June 2016 (23.06.2016) W P O P C T
    (12) INTERNATIONAL APPLICATION PUBLISHED UNDER THE PATENT COOPERATION TREATY (PCT) (19) World Intellectual Property Organization International Bureau (10) International Publication Number (43) International Publication Date WO 2016/096923 Al 23 June 2016 (23.06.2016) W P O P C T (51) International Patent Classification: (81) Designated States (unless otherwise indicated, for every C12N 15/82 (2006.01) C12Q 1/68 (2006.01) kind of national protection available): AE, AG, AL, AM, C12N 15/113 (2010.01) AO, AT, AU, AZ, BA, BB, BG, BH, BN, BR, BW, BY, BZ, CA, CH, CL, CN, CO, CR, CU, CZ, DE, DK, DM, (21) Number: International Application DO, DZ, EC, EE, EG, ES, FI, GB, GD, GE, GH, GM, GT, PCT/EP20 15/079893 HN, HR, HU, ID, IL, IN, IR, IS, JP, KE, KG, KN, KP, KR, (22) International Filing Date: KZ, LA, LC, LK, LR, LS, LU, LY, MA, MD, ME, MG, 15 December 2015 (15. 12.2015) MK, MN, MW, MX, MY, MZ, NA, NG, NI, NO, NZ, OM, PA, PE, PG, PH, PL, PT, QA, RO, RS, RU, RW, SA, SC, (25) Filing Language: English SD, SE, SG, SK, SL, SM, ST, SV, SY, TH, TJ, TM, TN, (26) Publication Language: English TR, TT, TZ, UA, UG, US, UZ, VC, VN, ZA, ZM, ZW. (30) Priority Data: (84) Designated States (unless otherwise indicated, for every 14307040.7 15 December 2014 (15. 12.2014) EP kind of regional protection available): ARIPO (BW, GH, GM, KE, LR, LS, MW, MZ, NA, RW, SD, SL, ST, SZ, (71) Applicants: PARIS SCIENCES ET LETTRES - TZ, UG, ZM, ZW), Eurasian (AM, AZ, BY, KG, KZ, RU, QUARTIER LATIN [FR/FR]; 62bis, rue Gay-Lussac, TJ, TM), European (AL, AT, BE, BG, CH, CY, CZ, DE, 75005 Paris (FR).
    [Show full text]
  • Sex Is a Ubiquitous, Ancient, and Inherent Attribute of Eukaryotic Life
    PAPER Sex is a ubiquitous, ancient, and inherent attribute of COLLOQUIUM eukaryotic life Dave Speijera,1, Julius Lukešb,c, and Marek Eliášd,1 aDepartment of Medical Biochemistry, Academic Medical Center, University of Amsterdam, 1105 AZ, Amsterdam, The Netherlands; bInstitute of Parasitology, Biology Centre, Czech Academy of Sciences, and Faculty of Sciences, University of South Bohemia, 370 05 Ceské Budejovice, Czech Republic; cCanadian Institute for Advanced Research, Toronto, ON, Canada M5G 1Z8; and dDepartment of Biology and Ecology, University of Ostrava, 710 00 Ostrava, Czech Republic Edited by John C. Avise, University of California, Irvine, CA, and approved April 8, 2015 (received for review February 14, 2015) Sexual reproduction and clonality in eukaryotes are mostly Sex in Eukaryotic Microorganisms: More Voyeurs Needed seen as exclusive, the latter being rather exceptional. This view Whereas absence of sex is considered as something scandalous for might be biased by focusing almost exclusively on metazoans. a zoologist, scientists studying protists, which represent the ma- We analyze and discuss reproduction in the context of extant jority of extant eukaryotic diversity (2), are much more ready to eukaryotic diversity, paying special attention to protists. We accept that a particular eukaryotic group has not shown any evi- present results of phylogenetically extended searches for ho- dence of sexual processes. Although sex is very well documented mologs of two proteins functioning in cell and nuclear fusion, in many protist groups, and members of some taxa, such as ciliates respectively (HAP2 and GEX1), providing indirect evidence for (Alveolata), diatoms (Stramenopiles), or green algae (Chlor- these processes in several eukaryotic lineages where sex has oplastida), even serve as models to study various aspects of sex- – not been observed yet.
    [Show full text]
  • University of Oklahoma
    UNIVERSITY OF OKLAHOMA GRADUATE COLLEGE MACRONUTRIENTS SHAPE MICROBIAL COMMUNITIES, GENE EXPRESSION AND PROTEIN EVOLUTION A DISSERTATION SUBMITTED TO THE GRADUATE FACULTY in partial fulfillment of the requirements for the Degree of DOCTOR OF PHILOSOPHY By JOSHUA THOMAS COOPER Norman, Oklahoma 2017 MACRONUTRIENTS SHAPE MICROBIAL COMMUNITIES, GENE EXPRESSION AND PROTEIN EVOLUTION A DISSERTATION APPROVED FOR THE DEPARTMENT OF MICROBIOLOGY AND PLANT BIOLOGY BY ______________________________ Dr. Boris Wawrik, Chair ______________________________ Dr. J. Phil Gibson ______________________________ Dr. Anne K. Dunn ______________________________ Dr. John Paul Masly ______________________________ Dr. K. David Hambright ii © Copyright by JOSHUA THOMAS COOPER 2017 All Rights Reserved. iii Acknowledgments I would like to thank my two advisors Dr. Boris Wawrik and Dr. J. Phil Gibson for helping me become a better scientist and better educator. I would also like to thank my committee members Dr. Anne K. Dunn, Dr. K. David Hambright, and Dr. J.P. Masly for providing valuable inputs that lead me to carefully consider my research questions. I would also like to thank Dr. J.P. Masly for the opportunity to coauthor a book chapter on the speciation of diatoms. It is still such a privilege that you believed in me and my crazy diatom ideas to form a concise chapter in addition to learn your style of writing has been a benefit to my professional development. I’m also thankful for my first undergraduate research mentor, Dr. Miriam Steinitz-Kannan, now retired from Northern Kentucky University, who was the first to show the amazing wonders of pond scum. Who knew that studying diatoms and algae as an undergraduate would lead me all the way to a Ph.D.
    [Show full text]
  • Number of Living Species in Australia and the World
    Numbers of Living Species in Australia and the World 2nd edition Arthur D. Chapman Australian Biodiversity Information Services australia’s nature Toowoomba, Australia there is more still to be discovered… Report for the Australian Biological Resources Study Canberra, Australia September 2009 CONTENTS Foreword 1 Insecta (insects) 23 Plants 43 Viruses 59 Arachnida Magnoliophyta (flowering plants) 43 Protoctista (mainly Introduction 2 (spiders, scorpions, etc) 26 Gymnosperms (Coniferophyta, Protozoa—others included Executive Summary 6 Pycnogonida (sea spiders) 28 Cycadophyta, Gnetophyta under fungi, algae, Myriapoda and Ginkgophyta) 45 Chromista, etc) 60 Detailed discussion by Group 12 (millipedes, centipedes) 29 Ferns and Allies 46 Chordates 13 Acknowledgements 63 Crustacea (crabs, lobsters, etc) 31 Bryophyta Mammalia (mammals) 13 Onychophora (velvet worms) 32 (mosses, liverworts, hornworts) 47 References 66 Aves (birds) 14 Hexapoda (proturans, springtails) 33 Plant Algae (including green Reptilia (reptiles) 15 Mollusca (molluscs, shellfish) 34 algae, red algae, glaucophytes) 49 Amphibia (frogs, etc) 16 Annelida (segmented worms) 35 Fungi 51 Pisces (fishes including Nematoda Fungi (excluding taxa Chondrichthyes and (nematodes, roundworms) 36 treated under Chromista Osteichthyes) 17 and Protoctista) 51 Acanthocephala Agnatha (hagfish, (thorny-headed worms) 37 Lichen-forming fungi 53 lampreys, slime eels) 18 Platyhelminthes (flat worms) 38 Others 54 Cephalochordata (lancelets) 19 Cnidaria (jellyfish, Prokaryota (Bacteria Tunicata or Urochordata sea anenomes, corals) 39 [Monera] of previous report) 54 (sea squirts, doliolids, salps) 20 Porifera (sponges) 40 Cyanophyta (Cyanobacteria) 55 Invertebrates 21 Other Invertebrates 41 Chromista (including some Hemichordata (hemichordates) 21 species previously included Echinodermata (starfish, under either algae or fungi) 56 sea cucumbers, etc) 22 FOREWORD In Australia and around the world, biodiversity is under huge Harnessing core science and knowledge bases, like and growing pressure.
    [Show full text]
  • Protocols for Monitoring Harmful Algal Blooms for Sustainable Aquaculture and Coastal Fisheries in Chile (Supplement Data)
    Protocols for monitoring Harmful Algal Blooms for sustainable aquaculture and coastal fisheries in Chile (Supplement data) Provided by Kyoko Yarimizu, et al. Table S1. Phytoplankton Naming Dictionary: This dictionary was constructed from the species observed in Chilean coast water in the past combined with the IOC list. Each name was verified with the list provided by IFOP and online dictionaries, AlgaeBase (https://www.algaebase.org/) and WoRMS (http://www.marinespecies.org/). The list is subjected to be updated. Phylum Class Order Family Genus Species Ochrophyta Bacillariophyceae Achnanthales Achnanthaceae Achnanthes Achnanthes longipes Bacillariophyta Coscinodiscophyceae Coscinodiscales Heliopeltaceae Actinoptychus Actinoptychus spp. Dinoflagellata Dinophyceae Gymnodiniales Gymnodiniaceae Akashiwo Akashiwo sanguinea Dinoflagellata Dinophyceae Gymnodiniales Gymnodiniaceae Amphidinium Amphidinium spp. Ochrophyta Bacillariophyceae Naviculales Amphipleuraceae Amphiprora Amphiprora spp. Bacillariophyta Bacillariophyceae Thalassiophysales Catenulaceae Amphora Amphora spp. Cyanobacteria Cyanophyceae Nostocales Aphanizomenonaceae Anabaenopsis Anabaenopsis milleri Cyanobacteria Cyanophyceae Oscillatoriales Coleofasciculaceae Anagnostidinema Anagnostidinema amphibium Anagnostidinema Cyanobacteria Cyanophyceae Oscillatoriales Coleofasciculaceae Anagnostidinema lemmermannii Cyanobacteria Cyanophyceae Oscillatoriales Microcoleaceae Annamia Annamia toxica Cyanobacteria Cyanophyceae Nostocales Aphanizomenonaceae Aphanizomenon Aphanizomenon flos-aquae
    [Show full text]
  • Biology and Systematics of Heterokont and Haptophyte Algae1
    American Journal of Botany 91(10): 1508±1522. 2004. BIOLOGY AND SYSTEMATICS OF HETEROKONT AND HAPTOPHYTE ALGAE1 ROBERT A. ANDERSEN Bigelow Laboratory for Ocean Sciences, P.O. Box 475, West Boothbay Harbor, Maine 04575 USA In this paper, I review what is currently known of phylogenetic relationships of heterokont and haptophyte algae. Heterokont algae are a monophyletic group that is classi®ed into 17 classes and represents a diverse group of marine, freshwater, and terrestrial algae. Classes are distinguished by morphology, chloroplast pigments, ultrastructural features, and gene sequence data. Electron microscopy and molecular biology have contributed signi®cantly to our understanding of their evolutionary relationships, but even today class relationships are poorly understood. Haptophyte algae are a second monophyletic group that consists of two classes of predominately marine phytoplankton. The closest relatives of the haptophytes are currently unknown, but recent evidence indicates they may be part of a large assemblage (chromalveolates) that includes heterokont algae and other stramenopiles, alveolates, and cryptophytes. Heter- okont and haptophyte algae are important primary producers in aquatic habitats, and they are probably the primary carbon source for petroleum products (crude oil, natural gas). Key words: chromalveolate; chromist; chromophyte; ¯agella; phylogeny; stramenopile; tree of life. Heterokont algae are a monophyletic group that includes all (Phaeophyceae) by Linnaeus (1753), and shortly thereafter, photosynthetic organisms with tripartite tubular hairs on the microscopic chrysophytes (currently 5 Oikomonas, Anthophy- mature ¯agellum (discussed later; also see Wetherbee et al., sa) were described by MuÈller (1773, 1786). The history of 1988, for de®nitions of mature and immature ¯agella), as well heterokont algae was recently discussed in detail (Andersen, as some nonphotosynthetic relatives and some that have sec- 2004), and four distinct periods were identi®ed.
    [Show full text]
  • The Phytoplankton of an Enriched, Soft-Water Lake Subject to Intermittent Hydraulic Flushing
    The phytoplankton of an enriched, soft- water lakel subject to intermittent hydraulic flushing (Grasmere, English Lake District) Item Type monograph Authors Reynolds, C.S.; Lund, J.W.G. Publisher Freshwater Biological Association Download date 01/10/2021 05:29:43 Link to Item http://hdl.handle.net/1834/22651 The Phytoplankton of an enriched, soft-water lake subject to intermittent hydraulic flushing. (Grasmere, English Lake District) by C.S. Reynolds and J.W.G. Lund Project Leader : C.S. Reynolds Report Date : November 1987 Report to : North West Water FBA Report Ref No. Wl/207/5 FBA Project No. 207 The phytoplankton of an enriched, soft-water lake subject to intermittent hydraulic flushing (Grasmere, English Lake District). C.S. REYNOLDS and J.W.G. LUND, Freshwater Biological Association, Windermere Laboratory, Ambleside, Cumbria LA22 OLP, U.K. Running Head : Phytoplankton of Grasmere Correspondence : C.S. Reynolds, Freshwater Biological Association, Windermere Laboratory, Ambleside, Cumbria, LA22 OLP 2 SUMMARY 1. The abundance and species composition of the phytoplankton of Grasmere were monitored over a 12-year period following the commissioning of a small sewage treatment works, upstream of the lake. 2. Although Grasmere has been subject to increased phosphorus-loading and has quickly developed many features associated with eutrophication, the composition of its plankton has retained the characteristics of a mesotrophic, soft-water lake: a vernal diatom maximum, generally dominated by Asterionella, is followed by summer growths of nanoplanktonic species, of various colonial Chlorophyceae, before a substantial return to Asterionella-dominance in the autumn. In cooler summers, there have been episodes of renewed diatom growth, followed by truncated recapitulations of the essential summer sequence.
    [Show full text]
  • Origin and Evolution of Plastids and Mitochondria : the Phylogenetic Diversity of Algae
    Cah. Biol. Mar. (2001) 42 : 11-24 Origin and evolution of plastids and mitochondria : the phylogenetic diversity of algae Catherine BOYEN*, Marie-Pierre OUDOT and Susan LOISEAUX-DE GOER UMR 1931 CNRS-Goëmar, Station Biologique CNRS-INSU-Université Paris 6, Place Georges-Teissier, BP 74, F29682 Roscoff Cedex, France. *corresponding author Fax: 33 2 98 29 23 24 ; E-mail: [email protected] Abstract: This review presents an account of the current knowledge concerning the endosymbiotic origin of plastids and mitochondria. The importance of algae as providing a large reservoir of diversified evolutionary models is emphasized. Several reviews describing the plastidial and mitochondrial genome organization and gene content have been published recently. Therefore we provide a survey of the different approaches that are used to investigate the evolution of organellar genomes since the endosymbiotic events. The importance of integrating population genetics concepts to understand better the global evolution of the cytoplasmically inherited organelles is especially emphasized. Résumé : Cette revue fait le point des connaissances actuelles concernant l’origine endosymbiotique des plastes et des mito- chondries en insistant plus particulièrement sur les données portant sur les algues. Ces organismes représentent en effet des lignées eucaryotiques indépendantes très diverses, et constituent ainsi un abondant réservoir de modèles évolutifs. L’organisation et le contenu en gènes des génomes plastidiaux et mitochondriaux chez les eucaryotes ont été détaillés exhaustivement dans plusieurs revues récentes. Nous présentons donc une synthèse des différentes approches utilisées pour comprendre l’évolution de ces génomes organitiques depuis l’événement endosymbiotique. En particulier nous soulignons l’importance des concepts de la génétique des populations pour mieux comprendre l’évolution des génomes à transmission cytoplasmique dans la cellule eucaryote.
    [Show full text]
  • The Revised Classification of Eukaryotes
    See discussions, stats, and author profiles for this publication at: https://www.researchgate.net/publication/231610049 The Revised Classification of Eukaryotes Article in Journal of Eukaryotic Microbiology · September 2012 DOI: 10.1111/j.1550-7408.2012.00644.x · Source: PubMed CITATIONS READS 961 2,825 25 authors, including: Sina M Adl Alastair Simpson University of Saskatchewan Dalhousie University 118 PUBLICATIONS 8,522 CITATIONS 264 PUBLICATIONS 10,739 CITATIONS SEE PROFILE SEE PROFILE Christopher E Lane David Bass University of Rhode Island Natural History Museum, London 82 PUBLICATIONS 6,233 CITATIONS 464 PUBLICATIONS 7,765 CITATIONS SEE PROFILE SEE PROFILE Some of the authors of this publication are also working on these related projects: Biodiversity and ecology of soil taste amoeba View project Predator control of diversity View project All content following this page was uploaded by Smirnov Alexey on 25 October 2017. The user has requested enhancement of the downloaded file. The Journal of Published by the International Society of Eukaryotic Microbiology Protistologists J. Eukaryot. Microbiol., 59(5), 2012 pp. 429–493 © 2012 The Author(s) Journal of Eukaryotic Microbiology © 2012 International Society of Protistologists DOI: 10.1111/j.1550-7408.2012.00644.x The Revised Classification of Eukaryotes SINA M. ADL,a,b ALASTAIR G. B. SIMPSON,b CHRISTOPHER E. LANE,c JULIUS LUKESˇ,d DAVID BASS,e SAMUEL S. BOWSER,f MATTHEW W. BROWN,g FABIEN BURKI,h MICAH DUNTHORN,i VLADIMIR HAMPL,j AARON HEISS,b MONA HOPPENRATH,k ENRIQUE LARA,l LINE LE GALL,m DENIS H. LYNN,n,1 HILARY MCMANUS,o EDWARD A. D.
    [Show full text]
  • Lateral Gene Transfer of Anion-Conducting Channelrhodopsins Between Green Algae and Giant Viruses
    bioRxiv preprint doi: https://doi.org/10.1101/2020.04.15.042127; this version posted April 23, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. 1 5 Lateral gene transfer of anion-conducting channelrhodopsins between green algae and giant viruses Andrey Rozenberg 1,5, Johannes Oppermann 2,5, Jonas Wietek 2,3, Rodrigo Gaston Fernandez Lahore 2, Ruth-Anne Sandaa 4, Gunnar Bratbak 4, Peter Hegemann 2,6, and Oded 10 Béjà 1,6 1Faculty of Biology, Technion - Israel Institute of Technology, Haifa 32000, Israel. 2Institute for Biology, Experimental Biophysics, Humboldt-Universität zu Berlin, Invalidenstraße 42, Berlin 10115, Germany. 3Present address: Department of Neurobiology, Weizmann 15 Institute of Science, Rehovot 7610001, Israel. 4Department of Biological Sciences, University of Bergen, N-5020 Bergen, Norway. 5These authors contributed equally: Andrey Rozenberg, Johannes Oppermann. 6These authors jointly supervised this work: Peter Hegemann, Oded Béjà. e-mail: [email protected] ; [email protected] 20 ABSTRACT Channelrhodopsins (ChRs) are algal light-gated ion channels widely used as optogenetic tools for manipulating neuronal activity 1,2. Four ChR families are currently known. Green algal 3–5 and cryptophyte 6 cation-conducting ChRs (CCRs), cryptophyte anion-conducting ChRs (ACRs) 7, and the MerMAID ChRs 8. Here we 25 report the discovery of a new family of phylogenetically distinct ChRs encoded by marine giant viruses and acquired from their unicellular green algal prasinophyte hosts.
    [Show full text]
  • A Review of Diatom Lipid Droplets
    biology Review A Review of Diatom Lipid Droplets Ben Leyland, Sammy Boussiba and Inna Khozin-Goldberg * Microalgal Biotechnology Laboratory, The French Associates Institute for Agriculture and Biotechnology of Drylands, The J. Blaustein Institutes for Desert Research, Ben-Gurion University of the Negev, Sede Boqer Campus, Midreshet Ben-Gurion 8499000, Israel; [email protected] (B.L.); [email protected] (S.B.) * Correspondence: [email protected]; Tel.: +972-8656-3478 Received: 18 December 2019; Accepted: 14 February 2020; Published: 21 February 2020 Abstract: The dynamic nutrient availability and photon flux density of diatom habitats necessitate buffering capabilities in order to maintain metabolic homeostasis. This is accomplished by the biosynthesis and turnover of storage lipids, which are sequestered in lipid droplets (LDs). LDs are an organelle conserved among eukaryotes, composed of a neutral lipid core surrounded by a polar lipid monolayer. LDs shield the intracellular environment from the accumulation of hydrophobic compounds and function as a carbon and electron sink. These functions are implemented by interconnections with other intracellular systems, including photosynthesis and autophagy. Since diatom lipid production may be a promising objective for biotechnological exploitation, a deeper understanding of LDs may offer targets for metabolic engineering. In this review, we provide an overview of diatom LD biology and biotechnological potential. Keywords: diatoms; lipid droplets; triacylglycerols 1. Introduction LDs are an organelle composed of a core of neutral lipids, mostly triacylglycerol (TAG), surrounded by a polar lipid monolayer [1,2]. LDs can store reserves of energy, membrane components, carbon skeletons, carotenoids and proteins [3,4]. Many different synonyms have been used to describe this organelle throughout the literature and they can vary between organisms, such as lipid bodies, lipid particles, oil bodies, oil globules, cytoplasmic inclusions, oleosomes and adiposomes.
    [Show full text]