Maintains Nuclear Envelope Architecture and Composition in Skin
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Nuclear Titin Interacts with A- and B-Type Lamins in Vitro and in Vivo
Research Article 239 Nuclear Titin interacts with A- and B-type lamins in vitro and in vivo Michael S. Zastrow1,*, Denise B. Flaherty2‡, Guy M. Benian2 and Katherine L. Wilson1,§ 1Department of Cell Biology, The Johns Hopkins University School of Medicine, 725 N. Wolfe St, Baltimore, MD 21205, USA 2Department of Pathology, Emory University, Whitehead Biomedical Research Building, Atlanta, GA 30332, USA *Present address: Department of Developmental Biology, Stanford University School of Medicine, Beckman Center, B300, 279 Campus Drive, Stanford, CA 94305, USA ‡Department of Biology, Eckerd College, SHB 105, 4200 54th Ave, St Petersburg, FL 33711, USA §Author for correspondence (e-mail: [email protected]) Accepted 4 October 2005 Journal of Cell Science 119, 239-249 Published by The Company of Biologists 2006 doi:10.1242/jcs.02728 Summary Lamins form structural filaments in the nucleus. Mutations lamin-downregulated [lmn-1(RNAi)] embryos, Ce-titin was in A-type lamins cause muscular dystrophy, undetectable at the nuclear envelope suggesting its cardiomyopathy and other diseases, including progeroid localization or stability requires Ce-lamin. In human cells syndromes. To identify new binding partners for lamin A, (HeLa), antibodies against the titin-specific domain M-is6 we carried out a two-hybrid screen with a human skeletal- gave both diffuse and punctate intranuclear staining by muscle cDNA library, using the Ig-fold domain of lamin A indirect immunofluorescence, and recognized at least three as bait. The C-terminal region of titin was recovered twice. bands larger than 1 MDa in immunoblots of isolated HeLa Previous investigators showed that nuclear isoforms of titin nuclei. -
S41467-020-18249-3.Pdf
ARTICLE https://doi.org/10.1038/s41467-020-18249-3 OPEN Pharmacologically reversible zonation-dependent endothelial cell transcriptomic changes with neurodegenerative disease associations in the aged brain Lei Zhao1,2,17, Zhongqi Li 1,2,17, Joaquim S. L. Vong2,3,17, Xinyi Chen1,2, Hei-Ming Lai1,2,4,5,6, Leo Y. C. Yan1,2, Junzhe Huang1,2, Samuel K. H. Sy1,2,7, Xiaoyu Tian 8, Yu Huang 8, Ho Yin Edwin Chan5,9, Hon-Cheong So6,8, ✉ ✉ Wai-Lung Ng 10, Yamei Tang11, Wei-Jye Lin12,13, Vincent C. T. Mok1,5,6,14,15 &HoKo 1,2,4,5,6,8,14,16 1234567890():,; The molecular signatures of cells in the brain have been revealed in unprecedented detail, yet the ageing-associated genome-wide expression changes that may contribute to neurovas- cular dysfunction in neurodegenerative diseases remain elusive. Here, we report zonation- dependent transcriptomic changes in aged mouse brain endothelial cells (ECs), which pro- minently implicate altered immune/cytokine signaling in ECs of all vascular segments, and functional changes impacting the blood–brain barrier (BBB) and glucose/energy metabolism especially in capillary ECs (capECs). An overrepresentation of Alzheimer disease (AD) GWAS genes is evident among the human orthologs of the differentially expressed genes of aged capECs, while comparative analysis revealed a subset of concordantly downregulated, functionally important genes in human AD brains. Treatment with exenatide, a glucagon-like peptide-1 receptor agonist, strongly reverses aged mouse brain EC transcriptomic changes and BBB leakage, with associated attenuation of microglial priming. We thus revealed tran- scriptomic alterations underlying brain EC ageing that are complex yet pharmacologically reversible. -
Nesprins: from the Nuclear Envelope and Beyond
expert reviews http://www.expertreviews.org/ in molecular medicine Nesprins: from the nuclear envelope and beyond Dipen Rajgor and Catherine M. Shanahan* Nuclear envelope spectrin-repeat proteins (Nesprins), are a novel family of nuclear and cytoskeletal proteins with rapidly expanding roles as intracellular scaffolds and linkers. Originally described as proteins that localise to the nuclear envelope (NE) and establish nuclear-cytoskeletal connections, nesprins have now been found to comprise a diverse spectrum of tissue specific isoforms that localise to multiple sub-cellular compartments. Here, we describe how nesprins are necessary in maintaining cellular architecture by acting as essential scaffolds and linkers at both the NE and other sub-cellular domains. More importantly, we speculate how nesprin mutations may disrupt tissue specific nesprin scaffolds and explain the tissue specific nature of many nesprin-associated diseases, including laminopathies. The eukaryotic cytoplasm contains three major composed of three α-helical bundles with a left- types of cytoskeletal filaments: Filamentous- handed twist, and its primary function is to actin (F-actin), microtubules (MTs) and provide docking sites for proteins and other intermediate filaments (IFs). These components higher order complexes (Refs 3, 4). Although are organised in a manner that provides the cell most SR proteins contain CHDs, some possess with an internal framework fundamental for motifs which can interact with other cytoskeletal many processes, such as controlling cellular components, allowing linkage of SR-associated shape, polarity, adhesion and migration, complexes to filamentous structures other than cytokinesis, inter- and intracellular F-actin. In addition, these motifs allow cross- Nesprins: from the nuclear envelope and beyond communication and trafficking of organelles, linking between different filaments and dynamic vesicles, proteins and RNA (Refs 1, 2). -
Atrial Fibrillation (ATRIA) Study
European Journal of Human Genetics (2014) 22, 297–306 & 2014 Macmillan Publishers Limited All rights reserved 1018-4813/14 www.nature.com/ejhg REVIEW Atrial fibrillation: the role of common and rare genetic variants Morten S Olesen*,1,2,4, Morten W Nielsen1,2,4, Stig Haunsø1,2,3 and Jesper H Svendsen1,2,3 Atrial fibrillation (AF) is the most common cardiac arrhythmia affecting 1–2% of the general population. A number of studies have demonstrated that AF, and in particular lone AF, has a substantial genetic component. Monogenic mutations in lone and familial AF, although rare, have been recognized for many years. Presently, mutations in 25 genes have been associated with AF. However, the complexity of monogenic AF is illustrated by the recent finding that both gain- and loss-of-function mutations in the same gene can cause AF. Genome-wide association studies (GWAS) have indicated that common single-nucleotide polymorphisms (SNPs) have a role in the development of AF. Following the first GWAS discovering the association between PITX2 and AF, several new GWAS reports have identified SNPs associated with susceptibility of AF. To date, nine SNPs have been associated with AF. The exact biological pathways involving these SNPs and the development of AF are now starting to be elucidated. Since the first GWAS, the number of papers concerning the genetic basis of AF has increased drastically and the majority of these papers are for the first time included in a review. In this review, we discuss the genetic basis of AF and the role of both common and rare genetic variants in the susceptibility of developing AF. -
Eleven Daughters of NANOG
Genomics 84 (2004) 229–238 www.elsevier.com/locate/ygeno Eleven daughters of NANOG$ H. Anne F. Booth and Peter W.H. Holland* Department of Zoology, University of Oxford, South Parks Road, Oxford, OX1 3PS, UK Received 4 December 2003; accepted 25 February 2004 Available online 15 April 2004 Abstract Nanog is a recently discovered ANTP class homeobox gene. Mouse Nanog is expressed in the inner cell mass and in embryonic stem cells and has roles in self-renewal and maintenance of pluripotency. Here we describe the location, genomic organization, and relative ages of all human NANOG pseudogenes, comprising ten processed pseudogenes and one tandem duplicate. These are compared to the original, intact human NANOG gene. Eleven is an unusually high number of pseudogenes for a homeobox gene and must reflect expression in the human germ line. A pseudogene orthologous to NANOGP4 was found in chimpanzee and an expressed pseudogene in macaque. Examining pseudogenes of differing ages gives insight into pseudogene decay, which involves an excess of deletion mutations over insertions. The mouse genome has two processed pseudogenes, which are not clear orthologues of the primate pseudogenes. D 2004 Elsevier Inc. All rights reserved. Keywords: Homeobox; Pseudogene; Molecular evolution; Enk Homeobox genes are characterized by possession of a Mitsui and colleagues [3] identified a single human recognizable 60- or 63-amino-acid motif within the orthologue of the mouse Nanog gene, mapping to encoded protein. The homeobox gene superfamily is 12p13.31. extremely diverse, particularly within animal genomes, As of February 2004, the Mouse Genome Informatics and can be subdivided into several major classes, each web site and National Center for Biotechnology Information containing numerous gene families. -
Abnormal Nuclear Shape and Impaired Mechanotransduction in Emerin
JCB: ARTICLE Abnormal nuclear shape and impaired mechanotransduction in emerin-deficient cells Jan Lammerding,1 Janet Hsiao,2 P. Christian Schulze,1 Serguei Kozlov,3 Colin L. Stewart,3 and Richard T. Lee1 1Cardiovascular Division, Brigham and Women’s Hospital, Boston, MA 02115 2HST Division, Massachusetts Institute of Technology, Cambridge, MA 02139 3Cancer and Developmental Biology Lab, National Cancer Institute, Frederick, MD 21702 mery-Dreifuss muscular dystrophy can be caused type cells in cellular strain experiments, and the integrity by mutations in the nuclear envelope proteins lamin of emerin-deficient nuclear envelopes appeared normal E A/C and emerin. We recently demonstrated that in a nuclear microinjection assay. Interestingly, expres- A-type lamin-deficient cells have impaired nuclear me- sion of mechanosensitive genes in response to mechani- chanics and altered mechanotransduction, suggesting cal strain was impaired in emerin-deficient cells, and two potential disease mechanisms (Lammerding, J., P.C. prolonged mechanical stimulation increased apoptosis in Schulze, T. Takahashi, S. Kozlov, T. Sullivan, R.D. Kamm, emerin-deficient cells. Thus, emerin-deficient mouse em- C.L. Stewart, and R.T. Lee. 2004. J. Clin. Invest. 113: bryo fibroblasts have apparently normal nuclear me- 370–378). Here, we examined the function of emerin on chanics but impaired expression of mechanosensitive nuclear mechanics and strain-induced signaling. Emerin- genes in response to strain, suggesting that emerin muta- deficient mouse embryo fibroblasts have -
Produktinformation
Produktinformation Diagnostik & molekulare Diagnostik Laborgeräte & Service Zellkultur & Verbrauchsmaterial Forschungsprodukte & Biochemikalien Weitere Information auf den folgenden Seiten! See the following pages for more information! Lieferung & Zahlungsart Lieferung: frei Haus Bestellung auf Rechnung SZABO-SCANDIC Lieferung: € 10,- HandelsgmbH & Co KG Erstbestellung Vorauskassa Quellenstraße 110, A-1100 Wien T. +43(0)1 489 3961-0 Zuschläge F. +43(0)1 489 3961-7 [email protected] • Mindermengenzuschlag www.szabo-scandic.com • Trockeneiszuschlag • Gefahrgutzuschlag linkedin.com/company/szaboscandic • Expressversand facebook.com/szaboscandic SYNE1 FISH Probe Catalog # : FA0178 規格 : [ 200 uL ] List All Specification Application Image Product Made to order FISH probes for identification of gene amplification using Fluorescent In Situ Hybridization (Cell) Description: Fluorescent In Situ Hybridization Technique. (Technology) Supplied DAPI Counterstain (1500 ng/mL ) 250 uL Product: Storage Store at 4°C in the dark. Instruction: Origin: Human Source: Genomic DNA Notice: We strongly recommend the customer to use FFPE FISH PreTreatment Kit 1 (Catalog #: KA2375 or KA2691) for the pretreatment of Formalin-Fixed Paraffin-Embedded (FFPE) tissue sections. Regulation For research use only (RUO) Status: Applications Fluorescent In Situ Hybridization (Cell) Protocol Download Gene Information Entrez GeneID: 23345 Gene Name: SYNE1 Gene Alias: 8B,CPG2,DKFZp781J13156,FLJ30878,FLJ41140,KIAA0796,KIAA1262, KIAA1756,MYNE1,SCAR8 Gene spectrin repeat containing, nuclear envelope 1 Description: Omim ID: 608441, 610743 Gene Ontology: Hyperlink Gene Summary: This gene encodes a spectrin repeat containing protein expressed in skeletal and smooth muscle, and peripheral blood lymphocytes, that localizes to the nuclear membrane. Mutations in this gene have been associated with autosomal recessive spinocerebellar ataxia 8, also referred to as autosomal recessive cerebellar ataxia type 1 or recessive ataxia of Beauce. -
Discovery of a Molecular Glue That Enhances Uprmt to Restore
bioRxiv preprint doi: https://doi.org/10.1101/2021.02.17.431525; this version posted February 17, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Title: Discovery of a molecular glue that enhances UPRmt to restore proteostasis via TRKA-GRB2-EVI1-CRLS1 axis Authors: Li-Feng-Rong Qi1, 2 †, Cheng Qian1, †, Shuai Liu1, 2†, Chao Peng3, 4, Mu Zhang1, Peng Yang1, Ping Wu3, 4, Ping Li1 and Xiaojun Xu1, 2 * † These authors share joint first authorship Running title: Ginsenoside Rg3 reverses Parkinson’s disease model by enhancing mitochondrial UPR Affiliations: 1 State Key Laboratory of Natural Medicines, China Pharmaceutical University, 210009, Nanjing, Jiangsu, China. 2 Jiangsu Key Laboratory of Drug Discovery for Metabolic Diseases, China Pharmaceutical University, 210009, Nanjing, Jiangsu, China. 3. National Facility for Protein Science in Shanghai, Zhangjiang Lab, Shanghai Advanced Research Institute, Chinese Academy of Science, Shanghai 201210, China 4. Shanghai Science Research Center, Chinese Academy of Sciences, Shanghai, 201204, China. Corresponding author: Ping Li, State Key Laboratory of Natural Medicines, China Pharmaceutical University, 210009, Nanjing, Jiangsu, China. Email: [email protected], Xiaojun Xu, State Key Laboratory of Natural Medicines, Jiangsu Key Laboratory of Drug Discovery for Metabolic Diseases, China Pharmaceutical University, 210009, Nanjing, Jiangsu, China. Telephone number: +86-2583271203, E-mail: [email protected]. bioRxiv preprint doi: https://doi.org/10.1101/2021.02.17.431525; this version posted February 17, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. -
Characterisation of Enaptin and Sun1, Two Novel Mammalian Nuclear Envelope Proteins
Characterisation of Enaptin and Sun1, two novel mammalian nuclear envelope proteins INAUGURAL-DISSERTATION zur Erlangung des Doktorgrades der Mathematisch-Naturwissenschaftlichen Fakultät der Universität zü Köln vorgelegt von Padmakumar Velayuthan Chellammal aus Peruvilai, Indien Köln, 2004 Referees/Berichterstatter: Prof. Dr. Angelika A. Noegel Prof. Dr. Karin Schnetz Date of oral examination: 02.07.2004 Tag der mündlichen Prüfung The present research work was carried out under the supervision of Prof. Dr. Angelika A. Noegel, in the Institute of Biochemistry I, Medical Faculty, University of Cologne, Cologne, Germany. From August 2001 to July 2004. Diese Arbeit wurde von August 2001 bis Juli 2004 am Biochemischen Institut I der Medizinischen Fakultät der Universität zu Köln unter der Leitung von Prof. Dr. Angelika A. Noegel durchgeführt. First of all, I would like to express my heartiest gratitude to Prof.Dr.Noegel for giving me an opportunity to work in her group with Enaptin. Her positive attitude, constant encouragement and sustained interest in my project proved essential for my successful PhD work. I would like to thank Dr.Iakowos Karakesisoglou (Akis), our group leader for the excellent advice with my work, plentiful of encouragement and lots of motivation. He offered a hospitable environment in the lab with his friendly mannerisms and of course not to forget his sense of humour. I would also like to thank Dr.Elena Korenbaum with whom I started my PhD in the first year. It was a wonderful first year with her. It would be unfair if I don’t convey my thanks to Dr.Franciso Rivero, who helped me learn Confocal Microscopy and not the least, Spanish (all bad words). -
Cloning and Characterization of Enaptin, a Novel Giant Actin-Binding Protein Connecting the Nucleus to the Actin Cytoskeleton
Cloning and characterization of Enaptin, a novel giant actin-binding protein connecting the nucleus to the actin cytoskeleton INAUGURAL-DISSERTATION zur Erlangung des Doktorgrades der Mathematisch-Naturwissenschaftlichen Fakultät der Universität zü Köln vorgelegt von Sabu Abraham aus Thiruvaniyoor, Kerala, Indien Köln, 2004 Referees/Berichterstatter: Prof. Dr. Angelika A. Noegel Prof. Dr. Jens Brüning Date of oral examination: 08.07.2004 Tag der mündlichen Prüfung The present research work was carried out under the supervision of Prof. Dr. Angelika A. Noegel, in the Institute of Biochemistry I, Medical Faculty, University of Cologne, Cologne, Germany from August 2001 to July 2004. Diese Arbeit wurde von August 2001 bis Juli 2004 am Biochemischen Institut I der Medizinischen Fakultät der Universität zu Köln unter der Leitung von Prof. Dr. Angelika A. Noegel durchgeführt. To my beloved Pappa and Mummy Acknowledgements First of all, I would like to thank Prof. Dr. Angelika A Noegel for giving me an opportunity to work in her department and to do my PhD studies under her guidance. Her valuable guidance, creative suggestions, constructive criticism and constant encouragement during the course of work inspired and enabled me to complete this project. I would like to express here my deep sense of gratitude to her. I cannot find words to say thanks to our group leader Dr. Iakowos Karakesisoglou for his constant encouragement and discussions during the course of this study. His ‘story for a lesson’ approach always lifted my spirit up. It was wonderful to work with him. Thank you Akis. I would also like to thank Dr. Elena Korenbaum for guiding me in the first year of my study. -
Snapshot: the Nuclear Envelope II Andrea Rothballer and Ulrike Kutay Institute of Biochemistry, ETH Zurich, 8093 Zurich, Switzerland
SnapShot: The Nuclear Envelope II Andrea Rothballer and Ulrike Kutay Institute of Biochemistry, ETH Zurich, 8093 Zurich, Switzerland H. sapiens D. melanogaster C. elegans S. pombe S. cerevisiae Cytoplasmic filaments RanBP2 (Nup358) Nup358 CG11856 NPP-9 – – – Nup214 (CAN) DNup214 CG3820 NPP-14 Nup146 SPAC23D3.06c Nup159 Cytoplasmic ring and Nup88 Nup88 (Mbo) CG6819 – Nup82 SPBC13A2.02 Nup82 associated factors GLE1 GLE1 CG14749 – Gle1 SPBC31E1.05 Gle1 hCG1 (NUP2L1, NLP-1) tbd CG18789 – Amo1 SPBC15D4.10c Nup42 (Rip1) Nup98 Nup98 CG10198 Npp-10N Nup189N SPAC1486.05 Nup145N, Nup100, Nup116 Nup 98 complex RAE1 (GLE2) Rae1 CG9862 NPP-17 Rae1 SPBC16A3.05 Gle2 (Nup40) Nup160 Nup160 CG4738 NPP-6 Nup120 SPBC3B9.16c Nup120 Nup133 Nup133 CG6958 NPP-15 Nup132, Nup131 SPAC1805.04, Nup133 SPBP35G2.06c Nup107 Nup107 CG6743 NPP-5 Nup107 SPBC428.01c Nup84 Nup96 Nup96 CG10198 NPP-10C Nup189C SPAC1486.05 Nup145C Outer NPC scaffold Nup85 (PCNT1) Nup75 CG5733 NPP-2 Nup-85 SPBC17G9.04c Nup85 (Nup107-160 complex) Seh1 Nup44A CG8722 NPP-18 Seh1 SPAC15F9.02 Seh1 Sec13 Sec13 CG6773 Npp-20 Sec13 SPBC215.15 Sec13 Nup37 tbd CG11875 – tbd SPAC4F10.18 – Nup43 Nup43 CG7671 C09G9.2 – – – Centrin-21 tbd CG174931, CG318021 R08D7.51 Cdc311 SPCC1682.04 Cdc311 Nup205 tbd CG11943 NPP-3 Nup186 SPCC290.03c Nup192 Nup188 tbd CG8771 – Nup184 SPAP27G11.10c Nup188 Central NPC scaffold Nup155 Nup154 CG4579 NPP-8 tbd SPAC890.06 Nup170, Nup157 (Nup53-93 complex) Nup93 tbd CG7262 NPP-13 Nup97, Npp106 SPCC1620.11, Nic96 SPCC1739.14 Nup53(Nup35, MP44) tbd CG6540 NPP-19 Nup40 SPAC19E9.01c -
N Karry: the KASH Domain Family of Cargo-Specific Cytoskeletal Adaptor Proteins Daniel A
Review articles KASH ‘n Karry: the KASH domain family of cargo-specific cytoskeletal adaptor proteins Daniel A. Starr1 and Janice A. Fischer2* Summary membrane interacts with the cytoskeleton to position nuclei A diverse family of proteins has been discovered with a within the cell. As the nucleus is probably the easiest cargo to small C-terminal KASH domain in common. KASH domain proteins are localized uniquely to the outer visualize and follow in real time, nuclear positioning makes an nuclear envelope, enabling their cytoplasmic extensions excellent model to study cargo adaptors. Also, nuclear to tether the nucleus to actin filaments or microtubules. migration through the cytoplasm and nuclear anchorage KASH domains are targeted to the outer nuclear envelope within a polarized cell are essential processes for the develop- by SUN domains of inner nuclear envelope proteins. ment of nearly all eukaryotes (for review see Refs. 1–3). Our Several KASH protein genes were discovered as mutant story begins with a group of Drosophila and C. elegans alleles in model organisms with defects in developmen- tally regulated nuclear positioning. Recently, KASH-less mutants with mispositioned nuclei (Fig. 1). As described below, isoforms have been found that connect the cytoskeleton molecular characterization of these mutants has identified a to organelles other than the nucleus. A widened view of class of outer nuclear membrane components called KASH these proteins is now emerging, where KASH proteins proteins. Recent evidence has shown that certain isoforms of and their KASH-less counterparts are cargo-specific adaptors that not only link organelles to the cytoskeleton these proteins adapt cargos other than the nucleus.