Abnormal Nuclear Shape and Impaired Mechanotransduction in Emerin
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Emerin Deregulation Links Nuclear Shape Instability to Metastatic Potential
Author Manuscript Published OnlineFirst on August 28, 2018; DOI: 10.1158/0008-5472.CAN-18-0608 Author manuscripts have been peer reviewed and accepted for publication but have not yet been edited. Emerin deregulation links nuclear shape instability to metastatic potential Mariana Reis-Sobreiro1, Jie-Fu Chen1,†, Tatiana Novitskya2, Sungyong You1, Samantha Morley1, Kenneth Steadman1, Navjot Kaur Gill3, Adel Eskaros2, Mirja Rotinen1, Chia-Yi Chu4,5, Leland W.K. Chung4, 5, Hisashi Tanaka1, Wei Yang1, Beatrice S. Knudsen6, 7, Hsian-Rong Tseng8, Amy C. Rowat3, Edwin M. Posadas4, 5, Andries Zijlstra2, 9, Dolores Di Vizio1, and Michael R. Freeman1,* 1Division of Cancer Biology and Therapeutics, Departments of Surgery, Biomedical Sciences and Pathology and Laboratory Medicine, Samuel Oschin Comprehensive Cancer Institute, Cedars-Sinai Medical Center, Los Angeles, CA 90048; 2Department of Pathology, Microbiology and Immunology, Vanderbilt University, Nashville, TN 37240; 3Department of Integrative Biology and Physiology, University of California, Los Angeles, CA 90095-7246; 4Urologic Oncology Program/Uro-Oncology Research Laboratories, Samuel Oschin Comprehensive Center Institute, Cedars-Sinai Medical Center, Los Angeles, CA 90048; 5Division of Hematology/Oncology, Department of Medicine, Cedars-Sinai Medical Center, Los Angeles, CA 90048; 6Department of Biomedical Sciences, Cedars-Sinai Medical Center, Los Angeles, CA 90048; 7Department of Pathology and Laboratory Medicine, Cedars-Sinai Medical Center, Los Angeles, CA 90048; 8Department of Molecular and Medical Pharmacology, University of California, Los Angeles, CA 90095-1735; 9Vanderbilt-Ingram Cancer Center, Nashville, TN 37232. †Present address: Department of Pathology and Immunology, Washington University in St Louis School of Medicine. * Corresponding Author. Running title: Emerin deregulation leads to metastasis Keywords: nuclear shape instability, emerin, metastasis, circulating tumor cells, extracellular vesicles 1 Downloaded from cancerres.aacrjournals.org on September 28, 2021. -
Nuclear Titin Interacts with A- and B-Type Lamins in Vitro and in Vivo
Research Article 239 Nuclear Titin interacts with A- and B-type lamins in vitro and in vivo Michael S. Zastrow1,*, Denise B. Flaherty2‡, Guy M. Benian2 and Katherine L. Wilson1,§ 1Department of Cell Biology, The Johns Hopkins University School of Medicine, 725 N. Wolfe St, Baltimore, MD 21205, USA 2Department of Pathology, Emory University, Whitehead Biomedical Research Building, Atlanta, GA 30332, USA *Present address: Department of Developmental Biology, Stanford University School of Medicine, Beckman Center, B300, 279 Campus Drive, Stanford, CA 94305, USA ‡Department of Biology, Eckerd College, SHB 105, 4200 54th Ave, St Petersburg, FL 33711, USA §Author for correspondence (e-mail: [email protected]) Accepted 4 October 2005 Journal of Cell Science 119, 239-249 Published by The Company of Biologists 2006 doi:10.1242/jcs.02728 Summary Lamins form structural filaments in the nucleus. Mutations lamin-downregulated [lmn-1(RNAi)] embryos, Ce-titin was in A-type lamins cause muscular dystrophy, undetectable at the nuclear envelope suggesting its cardiomyopathy and other diseases, including progeroid localization or stability requires Ce-lamin. In human cells syndromes. To identify new binding partners for lamin A, (HeLa), antibodies against the titin-specific domain M-is6 we carried out a two-hybrid screen with a human skeletal- gave both diffuse and punctate intranuclear staining by muscle cDNA library, using the Ig-fold domain of lamin A indirect immunofluorescence, and recognized at least three as bait. The C-terminal region of titin was recovered twice. bands larger than 1 MDa in immunoblots of isolated HeLa Previous investigators showed that nuclear isoforms of titin nuclei. -
Nesprins: from the Nuclear Envelope and Beyond
expert reviews http://www.expertreviews.org/ in molecular medicine Nesprins: from the nuclear envelope and beyond Dipen Rajgor and Catherine M. Shanahan* Nuclear envelope spectrin-repeat proteins (Nesprins), are a novel family of nuclear and cytoskeletal proteins with rapidly expanding roles as intracellular scaffolds and linkers. Originally described as proteins that localise to the nuclear envelope (NE) and establish nuclear-cytoskeletal connections, nesprins have now been found to comprise a diverse spectrum of tissue specific isoforms that localise to multiple sub-cellular compartments. Here, we describe how nesprins are necessary in maintaining cellular architecture by acting as essential scaffolds and linkers at both the NE and other sub-cellular domains. More importantly, we speculate how nesprin mutations may disrupt tissue specific nesprin scaffolds and explain the tissue specific nature of many nesprin-associated diseases, including laminopathies. The eukaryotic cytoplasm contains three major composed of three α-helical bundles with a left- types of cytoskeletal filaments: Filamentous- handed twist, and its primary function is to actin (F-actin), microtubules (MTs) and provide docking sites for proteins and other intermediate filaments (IFs). These components higher order complexes (Refs 3, 4). Although are organised in a manner that provides the cell most SR proteins contain CHDs, some possess with an internal framework fundamental for motifs which can interact with other cytoskeletal many processes, such as controlling cellular components, allowing linkage of SR-associated shape, polarity, adhesion and migration, complexes to filamentous structures other than cytokinesis, inter- and intracellular F-actin. In addition, these motifs allow cross- Nesprins: from the nuclear envelope and beyond communication and trafficking of organelles, linking between different filaments and dynamic vesicles, proteins and RNA (Refs 1, 2). -
Dynamic Complexes of A-Type Lamins and Emerin Influence Adipogenic Capacity of the Cell Via Nucleocytoplasmic Distribution of Β-Catenin
Research Article 401 Dynamic complexes of A-type lamins and emerin influence adipogenic capacity of the cell via nucleocytoplasmic distribution of β-catenin Katarzyna Tilgner*, Kamila Wojciechowicz*, Colin Jahoda, Christopher Hutchison and Ewa Markiewicz‡ The School of Biological and Biomedical Sciences, The University of Durham, South Road, Durham DH1 3LE, UK *These authors contributed equally to this work ‡Author for correspondence (e-mail: [email protected]) Accepted 22 October 2008 Journal of Cell Science 122, 401-413 Published by The Company of Biologists 2009 doi:10.1242/jcs.026179 Summary It is well documented that adipogenic differentiation of the cell contrast, dermal fibroblasts, which are emerin null, is associated with downregulation of Wnt/β-catenin signalling. demonstrated increased nuclear accumulation of stable β- Using preadipocytes and dermal fibroblasts, we have found that catenin and constant lamin expression. This was also associated activation of the adipogenic program was associated with with an unusual adipogenic capacity of the cells, with marked changes in the expression of nuclear β-catenin- adipogenesis occurring in the presence of activated β-catenin interacting partners, emerin and lamins A/C, to influence but declining upon silencing of the protein expression with expression and activation of peroxisome proliferators-activated siRNA. We propose that the process of adipogenesis is affected receptors γ (PPARγ). In addition, silencing of protein expression by a dynamic link between complexes of emerin and lamins with siRNA revealed that β-catenin and emerin influenced each A/C at the nuclear envelope and nucleocytoplasmic distribution other’s levels of expression and the onset of adipogenesis, of β-catenin, to influence cellular plasticity and differentiation. -
Eleven Daughters of NANOG
Genomics 84 (2004) 229–238 www.elsevier.com/locate/ygeno Eleven daughters of NANOG$ H. Anne F. Booth and Peter W.H. Holland* Department of Zoology, University of Oxford, South Parks Road, Oxford, OX1 3PS, UK Received 4 December 2003; accepted 25 February 2004 Available online 15 April 2004 Abstract Nanog is a recently discovered ANTP class homeobox gene. Mouse Nanog is expressed in the inner cell mass and in embryonic stem cells and has roles in self-renewal and maintenance of pluripotency. Here we describe the location, genomic organization, and relative ages of all human NANOG pseudogenes, comprising ten processed pseudogenes and one tandem duplicate. These are compared to the original, intact human NANOG gene. Eleven is an unusually high number of pseudogenes for a homeobox gene and must reflect expression in the human germ line. A pseudogene orthologous to NANOGP4 was found in chimpanzee and an expressed pseudogene in macaque. Examining pseudogenes of differing ages gives insight into pseudogene decay, which involves an excess of deletion mutations over insertions. The mouse genome has two processed pseudogenes, which are not clear orthologues of the primate pseudogenes. D 2004 Elsevier Inc. All rights reserved. Keywords: Homeobox; Pseudogene; Molecular evolution; Enk Homeobox genes are characterized by possession of a Mitsui and colleagues [3] identified a single human recognizable 60- or 63-amino-acid motif within the orthologue of the mouse Nanog gene, mapping to encoded protein. The homeobox gene superfamily is 12p13.31. extremely diverse, particularly within animal genomes, As of February 2004, the Mouse Genome Informatics and can be subdivided into several major classes, each web site and National Center for Biotechnology Information containing numerous gene families. -
Live Cell Imaging and Electron Microscopy Reveal Dynamic Processes of BAF-Directed Nuclear Envelope Assembly
2540 Research Article Live cell imaging and electron microscopy reveal dynamic processes of BAF-directed nuclear envelope assembly Tokuko Haraguchi1,2,*, Tomoko Kojidani1, Takako Koujin1, Takeshi Shimi1, Hiroko Osakada1, Chie Mori1, Akitsugu Yamamoto3 and Yasushi Hiraoka1,2,4 1CREST Research Project, Kobe Advanced ICT Research Center, National Institute of Information and Communications Technology, 588-2 Iwaoka, Iwaoka-cho, Nishi-ku, Kobe 651-2492, Japan 2Graduate School of Science, Osaka University, 1-1 Machikaneyama, Toyonaka 560-0043, Japan 3Nagahama Institute of Bio-Science and Technology, 1266 Tamura-cho, Nagahama 526-0829, Japan 4Graduate School of Frontier Biosciences, Osaka University 1-3 Suita 565-0871, Japan *Author for correspondence (e-mail: [email protected]) Accepted19 May 2008 Journal of Cell Science 121, 2540-2554 Published by The Company of Biologists 2008 doi:10.1242/jcs.033597 Summary Assembly of the nuclear envelope (NE) in telophase is essential consistently abolished BAF accumulation at the core. In for higher eukaryotic cells to re-establish a functional nucleus. addition, RNAi of BAF eliminated the core assembly of lamin Time-lapse, FRAP and FRET analyses in human cells showed A and emerin, caused abnormal cytoplasmic accumulation of that barrier-to-autointegration factor (BAF), a DNA-binding precursor nuclear membranes and resulted in a significant delay protein, assembled first at the distinct ‘core’ region of the of NE assembly. These results suggest that the MT-mediated telophase chromosome and formed an immobile complex by BAF accumulation at the core facilitates NE assembly at the directly binding with other core-localizing NE proteins, such as end of mitosis. -
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Produktinformation Diagnostik & molekulare Diagnostik Laborgeräte & Service Zellkultur & Verbrauchsmaterial Forschungsprodukte & Biochemikalien Weitere Information auf den folgenden Seiten! See the following pages for more information! Lieferung & Zahlungsart Lieferung: frei Haus Bestellung auf Rechnung SZABO-SCANDIC Lieferung: € 10,- HandelsgmbH & Co KG Erstbestellung Vorauskassa Quellenstraße 110, A-1100 Wien T. +43(0)1 489 3961-0 Zuschläge F. +43(0)1 489 3961-7 [email protected] • Mindermengenzuschlag www.szabo-scandic.com • Trockeneiszuschlag • Gefahrgutzuschlag linkedin.com/company/szaboscandic • Expressversand facebook.com/szaboscandic SYNE1 FISH Probe Catalog # : FA0178 規格 : [ 200 uL ] List All Specification Application Image Product Made to order FISH probes for identification of gene amplification using Fluorescent In Situ Hybridization (Cell) Description: Fluorescent In Situ Hybridization Technique. (Technology) Supplied DAPI Counterstain (1500 ng/mL ) 250 uL Product: Storage Store at 4°C in the dark. Instruction: Origin: Human Source: Genomic DNA Notice: We strongly recommend the customer to use FFPE FISH PreTreatment Kit 1 (Catalog #: KA2375 or KA2691) for the pretreatment of Formalin-Fixed Paraffin-Embedded (FFPE) tissue sections. Regulation For research use only (RUO) Status: Applications Fluorescent In Situ Hybridization (Cell) Protocol Download Gene Information Entrez GeneID: 23345 Gene Name: SYNE1 Gene Alias: 8B,CPG2,DKFZp781J13156,FLJ30878,FLJ41140,KIAA0796,KIAA1262, KIAA1756,MYNE1,SCAR8 Gene spectrin repeat containing, nuclear envelope 1 Description: Omim ID: 608441, 610743 Gene Ontology: Hyperlink Gene Summary: This gene encodes a spectrin repeat containing protein expressed in skeletal and smooth muscle, and peripheral blood lymphocytes, that localizes to the nuclear membrane. Mutations in this gene have been associated with autosomal recessive spinocerebellar ataxia 8, also referred to as autosomal recessive cerebellar ataxia type 1 or recessive ataxia of Beauce. -
Emerin Loss in C. Elegans 925 Inhibitors), Resuspended in 25 Μl of 2× SDS Gel-Sample Buffer and Boiled for 5 Minutes
Research Article 923 The expression, lamin-dependent localization and RNAi depletion phenotype for emerin in C. elegans Yosef Gruenbaum1,*, Kenneth K. Lee2,*, Jun Liu3, Merav Cohen1 and Katherine L. Wilson2,‡ 1Department of Genetics, The Institute of Life Sciences, The Hebrew University of Jerusalem, Jerusalem 91904, Israel 2Department of Cell Biology, The Johns Hopkins University School of Medicine, 725 N. Wolfe Street, Baltimore, MD 21205, USA 3Department of Molecular Biology and Genetics, 423 Biotechnology Building, Cornell University, Ithaca, NY 14853, USA *These authors contributed equally to this work ‡Author for correspondence (e-mail: [email protected]) Accepted 15 November 2001 Journal of Cell Science 115, 923-929 (2002) © The Company of Biologists Ltd Summary Emerin belongs to the LEM-domain family of nuclear fellow LEM-domain protein Ce-MAN1, as well as Ce- membrane proteins, which are conserved in metazoans lamin, UNC-84 and nucleoporins do not depend on Ce- from C. elegans to humans. Loss of emerin in humans emerin for their localization. This result suggests that causes the X-linked form of Emery-Dreifuss muscular emerin is not essential to organize or localize the only lamin dystrophy (EDMD), but the disease mechanism is not (B-type) expressed in C. elegans. We also analyzed the understood. We have begun to address the function of RNAi phenotype resulting from the loss of emerin function emerin in C. elegans, a genetically tractable nematode. The in C. elegans under laboratory growth conditions, and emerin gene (emr-1) is conserved in C. elegans. We detect found no detectable phenotype throughout development. Ce-emerin protein in the nuclear envelopes of all cell We propose that C. -
Characterisation of Enaptin and Sun1, Two Novel Mammalian Nuclear Envelope Proteins
Characterisation of Enaptin and Sun1, two novel mammalian nuclear envelope proteins INAUGURAL-DISSERTATION zur Erlangung des Doktorgrades der Mathematisch-Naturwissenschaftlichen Fakultät der Universität zü Köln vorgelegt von Padmakumar Velayuthan Chellammal aus Peruvilai, Indien Köln, 2004 Referees/Berichterstatter: Prof. Dr. Angelika A. Noegel Prof. Dr. Karin Schnetz Date of oral examination: 02.07.2004 Tag der mündlichen Prüfung The present research work was carried out under the supervision of Prof. Dr. Angelika A. Noegel, in the Institute of Biochemistry I, Medical Faculty, University of Cologne, Cologne, Germany. From August 2001 to July 2004. Diese Arbeit wurde von August 2001 bis Juli 2004 am Biochemischen Institut I der Medizinischen Fakultät der Universität zu Köln unter der Leitung von Prof. Dr. Angelika A. Noegel durchgeführt. First of all, I would like to express my heartiest gratitude to Prof.Dr.Noegel for giving me an opportunity to work in her group with Enaptin. Her positive attitude, constant encouragement and sustained interest in my project proved essential for my successful PhD work. I would like to thank Dr.Iakowos Karakesisoglou (Akis), our group leader for the excellent advice with my work, plentiful of encouragement and lots of motivation. He offered a hospitable environment in the lab with his friendly mannerisms and of course not to forget his sense of humour. I would also like to thank Dr.Elena Korenbaum with whom I started my PhD in the first year. It was a wonderful first year with her. It would be unfair if I don’t convey my thanks to Dr.Franciso Rivero, who helped me learn Confocal Microscopy and not the least, Spanish (all bad words). -
Cloning and Characterization of Enaptin, a Novel Giant Actin-Binding Protein Connecting the Nucleus to the Actin Cytoskeleton
Cloning and characterization of Enaptin, a novel giant actin-binding protein connecting the nucleus to the actin cytoskeleton INAUGURAL-DISSERTATION zur Erlangung des Doktorgrades der Mathematisch-Naturwissenschaftlichen Fakultät der Universität zü Köln vorgelegt von Sabu Abraham aus Thiruvaniyoor, Kerala, Indien Köln, 2004 Referees/Berichterstatter: Prof. Dr. Angelika A. Noegel Prof. Dr. Jens Brüning Date of oral examination: 08.07.2004 Tag der mündlichen Prüfung The present research work was carried out under the supervision of Prof. Dr. Angelika A. Noegel, in the Institute of Biochemistry I, Medical Faculty, University of Cologne, Cologne, Germany from August 2001 to July 2004. Diese Arbeit wurde von August 2001 bis Juli 2004 am Biochemischen Institut I der Medizinischen Fakultät der Universität zu Köln unter der Leitung von Prof. Dr. Angelika A. Noegel durchgeführt. To my beloved Pappa and Mummy Acknowledgements First of all, I would like to thank Prof. Dr. Angelika A Noegel for giving me an opportunity to work in her department and to do my PhD studies under her guidance. Her valuable guidance, creative suggestions, constructive criticism and constant encouragement during the course of work inspired and enabled me to complete this project. I would like to express here my deep sense of gratitude to her. I cannot find words to say thanks to our group leader Dr. Iakowos Karakesisoglou for his constant encouragement and discussions during the course of this study. His ‘story for a lesson’ approach always lifted my spirit up. It was wonderful to work with him. Thank you Akis. I would also like to thank Dr. Elena Korenbaum for guiding me in the first year of my study. -
Snapshot: the Nuclear Envelope II Andrea Rothballer and Ulrike Kutay Institute of Biochemistry, ETH Zurich, 8093 Zurich, Switzerland
SnapShot: The Nuclear Envelope II Andrea Rothballer and Ulrike Kutay Institute of Biochemistry, ETH Zurich, 8093 Zurich, Switzerland H. sapiens D. melanogaster C. elegans S. pombe S. cerevisiae Cytoplasmic filaments RanBP2 (Nup358) Nup358 CG11856 NPP-9 – – – Nup214 (CAN) DNup214 CG3820 NPP-14 Nup146 SPAC23D3.06c Nup159 Cytoplasmic ring and Nup88 Nup88 (Mbo) CG6819 – Nup82 SPBC13A2.02 Nup82 associated factors GLE1 GLE1 CG14749 – Gle1 SPBC31E1.05 Gle1 hCG1 (NUP2L1, NLP-1) tbd CG18789 – Amo1 SPBC15D4.10c Nup42 (Rip1) Nup98 Nup98 CG10198 Npp-10N Nup189N SPAC1486.05 Nup145N, Nup100, Nup116 Nup 98 complex RAE1 (GLE2) Rae1 CG9862 NPP-17 Rae1 SPBC16A3.05 Gle2 (Nup40) Nup160 Nup160 CG4738 NPP-6 Nup120 SPBC3B9.16c Nup120 Nup133 Nup133 CG6958 NPP-15 Nup132, Nup131 SPAC1805.04, Nup133 SPBP35G2.06c Nup107 Nup107 CG6743 NPP-5 Nup107 SPBC428.01c Nup84 Nup96 Nup96 CG10198 NPP-10C Nup189C SPAC1486.05 Nup145C Outer NPC scaffold Nup85 (PCNT1) Nup75 CG5733 NPP-2 Nup-85 SPBC17G9.04c Nup85 (Nup107-160 complex) Seh1 Nup44A CG8722 NPP-18 Seh1 SPAC15F9.02 Seh1 Sec13 Sec13 CG6773 Npp-20 Sec13 SPBC215.15 Sec13 Nup37 tbd CG11875 – tbd SPAC4F10.18 – Nup43 Nup43 CG7671 C09G9.2 – – – Centrin-21 tbd CG174931, CG318021 R08D7.51 Cdc311 SPCC1682.04 Cdc311 Nup205 tbd CG11943 NPP-3 Nup186 SPCC290.03c Nup192 Nup188 tbd CG8771 – Nup184 SPAP27G11.10c Nup188 Central NPC scaffold Nup155 Nup154 CG4579 NPP-8 tbd SPAC890.06 Nup170, Nup157 (Nup53-93 complex) Nup93 tbd CG7262 NPP-13 Nup97, Npp106 SPCC1620.11, Nic96 SPCC1739.14 Nup53(Nup35, MP44) tbd CG6540 NPP-19 Nup40 SPAC19E9.01c -
N Karry: the KASH Domain Family of Cargo-Specific Cytoskeletal Adaptor Proteins Daniel A
Review articles KASH ‘n Karry: the KASH domain family of cargo-specific cytoskeletal adaptor proteins Daniel A. Starr1 and Janice A. Fischer2* Summary membrane interacts with the cytoskeleton to position nuclei A diverse family of proteins has been discovered with a within the cell. As the nucleus is probably the easiest cargo to small C-terminal KASH domain in common. KASH domain proteins are localized uniquely to the outer visualize and follow in real time, nuclear positioning makes an nuclear envelope, enabling their cytoplasmic extensions excellent model to study cargo adaptors. Also, nuclear to tether the nucleus to actin filaments or microtubules. migration through the cytoplasm and nuclear anchorage KASH domains are targeted to the outer nuclear envelope within a polarized cell are essential processes for the develop- by SUN domains of inner nuclear envelope proteins. ment of nearly all eukaryotes (for review see Refs. 1–3). Our Several KASH protein genes were discovered as mutant story begins with a group of Drosophila and C. elegans alleles in model organisms with defects in developmen- tally regulated nuclear positioning. Recently, KASH-less mutants with mispositioned nuclei (Fig. 1). As described below, isoforms have been found that connect the cytoskeleton molecular characterization of these mutants has identified a to organelles other than the nucleus. A widened view of class of outer nuclear membrane components called KASH these proteins is now emerging, where KASH proteins proteins. Recent evidence has shown that certain isoforms of and their KASH-less counterparts are cargo-specific adaptors that not only link organelles to the cytoskeleton these proteins adapt cargos other than the nucleus.