A Simple and Rapid Spectrophotometric Method for Nitrite Detection in Small Sample Volumes
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Oristm Cell Migration Assay – Tricoated
TM Oris Cell Migration Assay – TriCoated Product No.: CMATR1 & CMATR5 96-well, 2-D Assay for Investigating Cell Migration of Adherent Cell Lines on Three Coated Surfaces PROTOCOL & INSTRUCTIONS Table of Contents I. INTRODUCTION .................................................................................................. 2 II. ORISTM PLATE DIMENSIONS .............................................................................. 3 III. MATERIALS PROVIDED ...................................................................................... 3 IV. MATERIALS REQUIRED ...................................................................................... 3 V. CELL MIGRATION ASSAY – TRICOATED PROTOCOL .................................... 4 VI. DATA ACQUISITION ............................................................................................ 6 VII. ORDERING INFORMATION ................................................................................ 7 VIII. TERMS & CONDITIONS ...................................................................................... 7 Appendix I: Determining Optimal Cell Seeding Concentration ............................. 8 Appendix II: Determining Optimal Fluorescence Microplate Reader Settings ...... 8 Platypus Technologies, LLC 5520 Nobel Drive, Suite 100, Madison, WI 53711 Toll Free: 866.3296.4455 Phone: 608.237.1270 Fax: 608.237.1271 www.platypustech.com SP0034.06 Oris™ CELL MIGRATION ASSAY – TRICOATED I. INTRODUCTION The Oris™ Cell Migration Assay – TriCoated is a reproducible, sensitive, and flexible -
White Paper Absorbance Or Fluorescence: Which Is the Best
WHITE PAPER No. 40 Absorbance or Fluorescence: Which Is the Best Way to Quantify Nucleic Acids? Natascha Weiß1, Martin Armbrecht1 ¹Eppendorf AG, Hamburg, Germany Executive Summary When performing molecular experiments on nucleic acids, it is a basic requirement to determine the concentration as well as the quality of the sample. The standard method which serves this purpose is UV-Vis spectrophotometry – but is it always the right choice? In the present White Paper, the advantages and disadvantages of this technique will be described and it will be compared with nucleic acid quantification via fluorescence. In this context, it will be discussed which situations warrant the use of which one of the two methods. The decision will generally depend on the condition of the sample as well as on the requirements of downstream applications. Since the advantages of both methods complement each other well, it is most practical to have the ability to perform both methods on a single instrument in a flexible manner. Introduction Experiments involving nucleic acids are a mainstay in any evaluated by measuring the sample at additional wave molecular laboratory. DNA and RNA are isolated from micro- lengths (230 nm, 280 nm) and calculating the purity ratios, organisms and from cells of higher order organisms in order i.e. the ratios of the values obtained at 260/230 nm and at to be employed in a broad variety of processing steps and 260/280 nm, respectively. In this way, it will be evident analyses. It is crucial for any type of downstream applica- whether cellular debris or remainders of reagent used during tion that a defined amount of nucleic acid is used and that purification such as proteins, sugar molecules, certain salts the sample is free from contaminations that may impact the or phenols, are present in the solution, as these will generate experiments. -
Increasing the Reproducibility of Serial Dilutions
Increasing the Reproducibility of Serial Dilutions Michael Beier* Abstract Pipetting serial dilutions reproducibly can be difficult because it is a time consuming and consequently error prone methodology, especially in 384 well plates. Based upon the assumption that your pipettes are properly maintained and calibrated, the human influence has the largest impact on pipetting results. Observing good pipetting practice helps immensely to improve reproducibility and accuracy. In this article we focus on a selection of good pipetting techniques, which if maintained offer the best chance of increasing and maintaining the reproducibility of your serial dilutions. Mixing is a key component of dilution protocols and in this article we additionally discuss different mixing parameters to help you achieve a homogenous sample. To maximize consistency of dilution assays, automating the process offers many benefits. For ensuring highly reproducible serial dilutions we outline what features an automated pipetting system should have and introduce the VIAFLO ASSIST – a product purpose designed for this task. Introduction to good pipetting practice Good pipetting practice describes guidelines covering the basic techniques to ensure that the pipettes are used in an optimal and reproducible manner. Before preparing your assay, you should perform a pre-wet of your pipette tips. Do this by aspirating and dispensing the full volume 2-3 times. This procedure not only equilibrates temperature differences between liquid and tip but also humidifies the dead air space inside the pipette and tip. Neglecting to perform a pre-wet can result in a smaller delivery volume in the first few dispenses, thereby introducing errors into your subsequent dilution steps. -
On Food, Spectrophotometry, and Measurement Data Processing (Keynote Lecture)
12th IMEKO TC1 & TC7 Joint Symposium on Man Science & Measurement September, 3–5, 2008, Annecy, France ON FOOD, SPECTROPHOTOMETRY, AND MEASUREMENT DATA PROCESSING (KEYNOTE LECTURE) Roman Z. Morawski Warsaw University of Technology, Faculty of Electronics and Information Technology, Institute of Radioelectronics Warsaw, Poland [email protected] Abstract: Spectrophotometry is getting more and more Despite philosophical abnegation of food issues, the often the method of choice not only in laboratory analysis of practice of food preparation and refinement has flourished (bio)chemical substances, but also in the off-laboratory for centuries, and inspired research-and-invention-oriented identification and testing of physical properties of various minds. Today, we may speak about a fully developed products, in particular – of various organic mixtures discipline of science and technology. Enough to say that the including food products and ingredients. Specialized Institute of Food Technologists – the largest international, spectrophotometers, called spectrophotometric analyzers are non-profit professional organization involved in the designed for such applications. This keynote lecture is on advancement of food science and technology – is the state of the art and developmental trends in the domain encompassing 23 000 members worldwide. Its Committee of spectrophotometric analyzers of food with particular on Higher Education provided the following definition of emphasis on wine analyzers. The following issues are food science: "Food science is the discipline in which the covered: philosophical and methodological background of engineering, biological, and physical sciences are used to food analysis, physical and metrological principles of study the nature of foods, the causes of deterioration, the spectrophotometry, the role of measurement data processing principles underlying food processing, and the improvement in spectrophotometry, food analyzers on the market and of foods for the consuming public" [1]. -
Evos Cell Imaging Analysis Systems
Imaging, labeling, and detection solutions Microscopy | High-content analysis | Cell counting | Plate reading Minimizing the complexities of cellular analysis Our cellular analysis product portfolio combines the strengths of Invitrogen™ fluorescent reagents and a complete line of versatile analysis instrumentation. Select from a line of heavily peer-referenced platforms to make the discoveries that catalyze advances toward your research goals of tomorrow. Invitrogen™ EVOS™ imaging systems Our comprehensive imaging portfolio includes: • Cell imaging systems • Automated cell counting systems • High-content analysis systems Invitrogen™ Countess™ cell counters • Cell imaging reagents • Microplate readers All of our analysis systems are designed to work together— Thermo Scientific™ CellInsight™ from the initial cell culture check to more complex analyses. high-content analysis systems Discover more about your samples with automated cell counting, long-term live-cell imaging, automated multiwell plate scanning, and phenotypic screening. Thermo Scientific™ Varioskan™ LUX multimode plate reader Contents Microscopy Compact and portable imaging systems 4 EVOS imaging systems at a glance 5 EVOS M7000 Imaging System 6 Live-cell imaging with the Onstage Incubator 8 Image analysis with Celleste software 10 EVOS M5000 Imaging System 12 EVOS FLoid Imaging Station 14 EVOS XL Core Imaging System 15 EVOS vessel holders and stage plates 16 The power of LED illumination 17 EVOS objectives 18 Fluorophore selection guide 20 High-content analysis CellInsight high-content analysis platforms 22 CellInsight CX7 LZR High-Content Analysis Platform 24 CellInsight CX5 High-Content Screening Platform 25 HCS Studio Cell Analysis Software 26 Store Image and Database Management Software 27 Cell counting Countess II Automated Cell Counters 28 Plate reading Microplate readers 30 Microscopy Compact and portable imaging systems Now you can have an easy-to-use cell imaging platform From intimate hands-on demonstrations to presentations of where you want it and when you want it. -
ELISA Plate Reader
applications guide to microplate systems applications guide to microplate systems GETTING THE MOST FROM YOUR MOLECULAR DEVICES MICROPLATE SYSTEMS SALES OFFICES United States Molecular Devices Corp. Tel. 800-635-5577 Fax 408-747-3601 United Kingdom Molecular Devices Ltd. Tel. +44-118-944-8000 Fax +44-118-944-8001 Germany Molecular Devices GMBH Tel. +49-89-9620-2340 Fax +49-89-9620-2345 Japan Nihon Molecular Devices Tel. +06-6399-8211 Fax +06-6399-8212 www.moleculardevices.com ©2002 Molecular Devices Corporation. Printed in U.S.A. #0120-1293A SpectraMax, SoftMax Pro, Vmax and Emax are registered trademarks and VersaMax, Lmax, CatchPoint and Stoplight Red are trademarks of Molecular Devices Corporation. All other trademarks are proprty of their respective companies. complete solutions for signal transduction assays AN EXAMPLE USING THE CATCHPOINT CYCLIC-AMP FLUORESCENT ASSAY KIT AND THE GEMINI XS MICROPLATE READER The Molecular Devices family of products typical applications for Molecular Devices microplate readers offers complete solutions for your signal transduction assays. Our integrated systems γ α β s include readers, washers, software and reagents. GDP αs AC absorbance fluorescence luminescence GTP PRINCIPLE OF CATCHPOINT CYCLIC-AMP ASSAY readers readers readers > Cell lysate is incubated with anti-cAMP assay type SpectraMax® SpectraMax® SpectraMax® VersaMax™ VMax® EMax® Gemini XS LMax™ ATP Plus384 190 340PC384 antibody and cAMP-HRP conjugate ELISA/IMMUNOASSAYS > nucleus Single addition step PROTEIN QUANTITATION cAMP > λEX 530 nm/λEM 590 nm, λCO 570 nm UV (280) Bradford, BCA, Lowry For more information on CatchPoint™ assay NanoOrange™, CBQCA kits, including the complete procedure for this NUCLEIC ACID QUANTITATION assay (MaxLine Application Note #46), visit UV (260) our web site at www.moleculardevices.com. -
Wellwash and Wellwash Versa Washers for Expanded Functionality Ease of Use, Convenience, and Versatility for Washing Microplates in ELISA Assays
Wellwash and Wellwash Versa washers for expanded functionality Ease of use, convenience, and versatility for washing microplates in ELISA assays Reliable and easy-to-use Thermo Scientifi ™c Wellwash™ microplate strip washers provide secure washing performance for routine and research ELISA applications. Wellwash washers feature a large color display with graphical user interface, local language versions, and non-pressurized bottles for optimal ease of use, convenience, and safety. The Thermo Scientifi ™c Wellwash™ Microplate Washer is the In addition, the Wellwash Versa washer off ers: basic model for washing 96-well plates. It is intended for • Very fast and simple instrument setup and use with use when only a few similar assays are run routinely. The color-coded tube fi ttings and liquid-level sensor cables Thermo Scientifi ™c Wellwash™ Versa Microplate Washer is the advanced model for 96-well plates that can also wash • Wide selection of wash heads for 96-well plates and cells and 384-well plates, off ering the enhanced fl exibility 1 x 16 wash head for 384-well plates needed for research use. • Specially designed 2 x 8-cell wash head for gentle washing of cells in a 96-well plate Wellwash and Wellwash Versa washers off er: • Easy setup of wash protocols through a large color • Two wash bottles and one rinse bottle for screen and a visual user interface increased fl exibility • A sweep mode to ensure an extremely low residual • Easy connection to automation systems volume in the well, resulting in excellent washing performance and reliable ELISA results Convenient and simple to use • Adjustable wash parameters, such as dispense and The large color screen makes Wellwash and Wellwash aspiration height and aspiration speed, for optimal Versa washers very easy and convenient to use. -
Enzyme Analysis by Spectrophotometry - Plate Reader Method
Enzyme Analysis by Spectrophotometry - Plate Reader method Enzyme Extraction Equipment and reagents: Machine/Product Reference (Company, Type, …) Centrifuge – cooled Eppendorf 5415R with F45-24-11 rotor Mixer Mill / Cryo Mill Retsch MM 400 with 2x PTFE Adapter rack for 10 reaction vials 1.5 and 2.0 ml. Microtube Vortex Ika Vortex 1 Plate reader BioTek PowerWave HT with Gen 5 software Microcentrifuge tubes Safe-lock, 1.5 and 2.0 ml Pipettes (+Multistep / Multichannel) 1-5 ml; 0.1-1 ml; 5-100 µl 8-tube strip PCR tubes Crushed Ice Liquid Nitrogen (+ thermos jar) PVP (Polyvinylpyrrolidone, PVP40) Sigma PVP40T TRIS (Tris(hydroxymetyl)-aminoethane) -1 99 %, 121.14 g.mol Sigma T1378 Na 2-EDTA (disodium salt dehydrate) -1 99 %; 372.2 g.mol Sigma ED2SS DTT (1,4-Dithiothreitol) -1 ≥ 99 %; 154.24 g.mol Sigma 43815 Hydrochloric Acid concentrated HCl -1 -1 -1 37 %; 1,19 g.ml ; 36.46 g.mol = 12.08 mol.l VWR 20252.290 Most buffers can be prepared in advance and kept at 4°C Requirement: the samples must be collected in 1.5 or 2.0 ml Eppendorf tubes at harvest. Prepare reagent working solutions: Extraction buffer (0.1 M TRIS ; 1 mM Na 2-EDTA; 1 mM DTT, pH 7.8) Dissolve 12.114 g TRIS (121.14 g/mol) + 0.3722 mg EDTA (372 g/mol) + 0.1542 g DTT (154.2 g/mol) in 900 ml distilled water, adjust to pH 7.8 with HCl (use 5M HCl) and dilute to 1 liter. Keep the extraction buffer on ice. -
Microlab 500-Series
MicroLab 500-series Getting Started 2 Contents CHAPTER 1: Getting Started Connecting the Hardware…………………………………………………………………………….…...6 Installing the USB driver…………………….…………………………………………………...………..6 Installing the Software…………………………………………………………………………..………...8 Starting a new Experiment………………………………………………………………………..……….8 CHAPTER 2: Setting up a MicroLab Experiment Adding Input Sources Sensor Variables……………………………………………………………………………….…………10 Adding a Sensor ………………………………………………………………………………………….10 Calibrating a Sensor………………………………………………………………………………………11 The Calibration Module………………………………………………………………………………......11 Adding a Calibration Point……………………………………………………………………………….11 Correlating the Data……………………………………………………………………………………....12 Adding More Variables………………………………………………………………………………...…14 Formula Variables………………………………………………………………………………………...15 Designing an Experiment The Programming Steps………………………………………………………………………..………..17 Displaying the Data…………………………………………………………………………..…….……..17 Controlling an Experiment Starting the Experiment…………………………………………………………………….………..…..18 Stopping the Experiment…………………………………………………………………….………......18 Repeating an Experiment………………………………………………………………………………..18 Switches A & B……………………………………………………………………………………………19 Analyzing the Data Graph Analysis…………………………………………………………………………..………..………19 Add a Curve Fit………………………………………………………………………….....……19 Data Analysis…………………….…………………………………………………………………..……22 CHAPTER 3 - Spectrophotometry (522/516) Calibrating the Spectrophotometer Reading a Blank………...…………………………………………………………………………..…….23 3 Reading -
Modulus™ II Microplate Multimode Reader
Modulus™ II Microplate Multimode Reader Operating Manual Part Number 998-9375 Rev E Turner BioSystems, Inc. and its suppliers own the written and other materials in the Modulus II Microplate Reader operating manual. The written materials are copyrighted and protected by the copyright laws of the United States of America and, throughout the world, by the copyright laws of each jurisdiction according to pertinent treaties and conventions. No part of this manual may be reproduced manually, electronically, or in any other way without the written permission of Turner BioSystems, Inc. Modulus™ is a trademark of Turner BioSystems, Inc. All of the trademarks, service marks, and logos used in these materials are the property of Turner BioSystems, Inc. or their respective owners. All goods and services are sold subject to the terms and conditions of sale of the company within the Turner BioSystems, Inc. group that supplies them. A copy of these terms and conditions is available on request. NOTICE TO PURCHASER: The Modulus™ II Microplate Reader is for research purposes only. It is not intended or approved for diagnosis of disease in humans or animals. © Turner BioSystems, Inc. 2008 - All rights reserved. Made in the USA 2 Table of Contents 1 Instrument ............................................................................................................................... 7 1.1 Getting Started ................................................................................................................. 7 1.1.1 Description ........................................................................................................... -
Microplate Selection and Recommended Practices in High-Throughput Screening and Quantitative Biology
NLM Citation: Auld DSPh.D., Coassin PAB.S., Coussens NPPh.D., et al. Microplate Selection and Recommended Practices in High-throughput Screening and Quantitative Biology. 2020 Jun 1. In: Sittampalam GS, Grossman A, Brimacombe K, et al., editors. Assay Guidance Manual [Internet]. Bethesda (MD): Eli Lilly & Company and the National Center for Advancing Translational Sciences; 2004-. Bookshelf URL: https://www.ncbi.nlm.nih.gov/books/ Microplate Selection and Recommended Practices in High-throughput Screening and Quantitative Biology Douglas S. Auld, Ph.D.,1 Peter A. Coassin, B.S.,2 Nathan P. Coussens, Ph.D.,3 Paul Hensley,4 Carleen Klumpp-Thomas,5 Sam Michael,5 G. Sitta Sittampalam, Ph.D.,5 O. Joseph Trask, B.S.,6 Bridget K. Wagner, Ph.D.,7 Jeffrey R. Weidner, Ph.D.,8 Mary Jo Wildey, Ph.D.,9 and Jayme L. Dahlin, M.D., Ph.D. 7,10 Created: June 1, 2020. Abstract High-throughput screening (HTS) can efficiently assay multiple discrete biological reactions using multi-well microplates. The choice of microplate is a crucial yet often overlooked technical decision in HTS and quantitative biology. This chapter reviews key criteria for microplate selection, including: well number, well volume and shape, microplate color, surface treatments/coatings, and considerations for specialized applications such as high-content screening. This chapter then provides important technical advice for microplate handling including mixing, dispensing, incubation, and centrifugation. Special topics are discussed, including microplate surface properties, plate washing, well-to-well contamination, microplate positional effects, well-to-well and inter-lot variability, and troubleshooting. This information and best practices derived from academic, government, and industry screening centers, as well as microplate vendors, should accelerate assay development and enhance assay quality. -
Validation of Spectrophotometric Microplate
a Food Science and Technology ISSN 0101-2061 DDII: httpI://dx.doi.org/10.1590/1678-457X.36216 Validation of spectrophotometric microplate methods for polyphenol oxidase and peroxidase activities analysis in fruits and vegetables Érica Sayuri SIGUEMDTD1, Jorge Andrey Wilhelms GUT1,2* Abstract Enzymes polyphenol oxidase (PPD) and peroxidase (PDD) play important roles in the processing of fruits and vegetables, since they can produce undesirable changes in color, texture and flavor. Classical methods of activity assessment are based on cuvette spectrophotometric readings. This work aims to propose, to validate and to test microplate spectrophotometric methods. Samples of apple juice and lyophilized enzymes from mushroom and horseradish were analyzed by the cuvette and microplate methods and it was possible to validate the microplate assays with satisfactory results regarding linearity, repeatability, accuracy along with quantitation and detection limits. The proposed microplate methods proved to be reliable and reproducible as the classical methods besides having the advantages of allowing simultaneous analysis and requiring a reduced amount of samples and reactants, which can beneficial to the study of enzyme inactivation in the processing of fruits and vegetables. Keywords: microplate; polyphenol oxidase; peroxidase; enzymatic assay; apple juice. Practical Application: Rapid assessment of PDD/PPD activities in fruits and vegetables with reduced amounts of reactants. 1 Introduction Monitoring the activity of enzymes polyphenol oxidase 2002). The selection of the appropriate substrate is also important, (PPD, E.C.1.14.18.1) and peroxidase (PDD, E.C.1.11.1.7) is an seeing that the colored compounds formed from the oxidation important control point for harvesting, storing and processing products have their maximum absorption at different wavelengths of fruits and vegetables.